Name kqaMDmmcLRzn7Olcko1bjSoqABFKDmABFKDmumdXDmPIGKDmm7B2pn_1
Workunit 2109670
Created 24 Jul 2021, 1:56:42 UTC
Sent 24 Jul 2021, 2:05:32 UTC
Report deadline 31 Jul 2021, 2:05:32 UTC
Received 24 Jul 2021, 2:22:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4055
Run time 17 min 7 sec
CPU time 4 min 9 sec
Validate state Valid
Credit 23.55
Device peak FLOPS 6.55 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.43 GB
Peak swap size 3.08 GB
Peak disk usage 84.53 MB

Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:05:39 (9714): wrapper (7.7.26015): starting
04:05:39 (9714): wrapper: running run_atlas (--nthreads 2)
[2021-07-24 04:05:39] Arguments: --nthreads 2
[2021-07-24 04:05:39] Threads: 2
[2021-07-24 04:05:39] Checking for CVMFS
[2021-07-24 04:05:39] Probing /cvmfs/atlas.cern.ch... OK
[2021-07-24 04:05:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-07-24 04:05:40] Running cvmfs_config stat atlas.cern.ch
[2021-07-24 04:05:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-07-24 04:05:40] 2.5.1.0 13013 84358 84884 88914 3 1 4050472 4096000 1 65024 1 165895140 99.9483 8555506 15357 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2021-07-24 04:05:40] CVMFS is ok
[2021-07-24 04:05:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-07-24 04:05:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-07-24 04:05:40] Further information can be found at the LHC@home message board.
[2021-07-24 04:05:40] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-07-24 04:05:40] Checking for singularity binary...
[2021-07-24 04:05:40] which: no singularity in (/usr/sue/sbin:/usr/sue/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/opt/puppetlabs/bin:/root/bin)
[2021-07-24 04:05:40] Singularity is not installed, using version from CVMFS
[2021-07-24 04:05:40] Checking singularity works with /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-07-24 04:05:41] dcameron04.cern.ch
[2021-07-24 04:05:41] Singularity works
[2021-07-24 04:05:41] Set ATHENA_PROC_NUMBER=2
[2021-07-24 04:05:41] Starting ATLAS job with PandaID=5129440837
[2021-07-24 04:05:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec --pwd /root/boinc/slots/0 -B /cvmfs,/root /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-07-24 04:22:43]  *** The last 200 lines of the pilot log: ***
[2021-07-24 04:22:43]       "transformSetup": {
[2021-07-24 04:22:43]         "cpuTime": 0.0, 
[2021-07-24 04:22:43]         "wallTime": 0.01
[2021-07-24 04:22:43]       }, 
[2021-07-24 04:22:43]       "trfPredata": null, 
[2021-07-24 04:22:43]       "wallTime": 930.4
[2021-07-24 04:22:43]     }
[2021-07-24 04:22:43]   }
[2021-07-24 04:22:43] }
[2021-07-24 04:22:43] 2021-07-24 02:22:29,108 | DEBUG    | pilot.user.atlas.common          | update_server             | no need to update logstash for this job
[2021-07-24 04:22:43] 2021-07-24 02:22:29,108 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,108 | INFO     | pilot.control.job                | send_state                | job 5129440837 has finished - writing final server update
[2021-07-24 04:22:43] 2021-07-24 02:22:29,109 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 2
[2021-07-24 04:22:43] 2021-07-24 02:22:29,109 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -32184503 B to job metrics
[2021-07-24 04:22:43] 2021-07-24 02:22:29,110 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-07-24 04:22:43] 2021-07-24 02:22:29,110 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-07-24 04:22:43] 2021-07-24 02:22:29,112 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 506.05 B/s (using 9 data points, chi2=2497178)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,113 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=3 nEvents=2 dbTime=130.51999999999998 dbData=4308463 leak=506.05 chi2=2
[2021-07-24 04:22:43] 2021-07-24 02:22:29,113 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 2.461538
[2021-07-24 04:22:43] 2021-07-24 02:22:29,113 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,114 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-07-24 04:22:43] 2021-07-24 02:22:29,165 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /root/boinc/slots/0/PanDA_Pilot-5129440837/memory_monitor_summary.json (trf name=prmon)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,166 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 5.0, 'nthreads': 5.937, 'pss': 977667.0, 'rchar': 625999.0, 'r
[2021-07-24 04:22:43] 2021-07-24 02:22:29,166 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-07-24 04:22:43] 2021-07-24 02:22:29,166 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-07-24 04:22:43] 2021-07-24 02:22:29,166 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-24 04:22:43] 2021-07-24 02:22:29,166 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-07-24 04:22:43] 2021-07-24 02:22:29,166 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-07-24 04:22:43] 2021-07-24 02:22:29,167 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 0 s
[2021-07-24 04:22:43] 2021-07-24 02:22:29,167 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 9 s
[2021-07-24 04:22:43] 2021-07-24 02:22:29,167 | INFO     | pilot.util.timing                | timing_report             | . total setup = 9 s
[2021-07-24 04:22:43] 2021-07-24 02:22:29,167 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-07-24 04:22:43] 2021-07-24 02:22:29,167 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 965 s
[2021-07-24 04:22:43] 2021-07-24 02:22:29,167 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 0 s
[2021-07-24 04:22:43] 2021-07-24 02:22:29,167 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-07-24 04:22:43] 2021-07-24 02:22:29,167 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-07-24 04:22:43] 2021-07-24 02:22:29,168 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5129440837', 'state': 'finished', 'timestamp': '2021-07-24T04:22:29
[2021-07-24 04:22:43] 2021-07-24 02:22:29,168 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /root/boinc/slots/0/heartbeat.json
[2021-07-24 04:22:43] 2021-07-24 02:22:29,168 | DEBUG    | pilot.control.job                | queue_monitor             | job 5129440837 was dequeued from the monitored payloads queue
[2021-07-24 04:22:43] 2021-07-24 02:22:29,244 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-07-24 04:22:43] 2021-07-24 02:22:29,716 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-24 04:22:43] 2021-07-24 02:22:29,716 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-07-24 04:22:43] 2021-07-24 02:22:29,716 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-24 04:22:43] 2021-07-24 02:22:29,716 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5129440837
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 294 s
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | pid: 16823
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | pgrp: 16823
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | corecount: 2
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | sizes: {55221803: 3855643, 55221804: 3855809, 55221814: 3855751, 55222790: 3881917, 55222791: 389158
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-07-24 04:22:43] 2021-07-24 02:22:29,717 | INFO     | pilot.control.job                | make_job_report           | 
[2021-07-24 04:22:43] 2021-07-24 02:22:29,718 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /root/boinc/slots/0:
[2021-07-24 04:22:43] 
[2021-07-24 04:22:43] 2021-07-24 02:22:29,718 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /root/boinc/slots/0
[2021-07-24 04:22:43] 2021-07-24 02:22:29,760 | DEBUG    | pilot.control.job                | has_job_completed         | total 46288
[2021-07-24 04:22:43] -rw-------. 1 root root   200744 Jul 24 04:22 838411c0-5e09-4ad0-ba04-8a8f216bf2a0_88559.1.job.log
[2021-07-24 04:22:43] -rw-------. 1 root root  1008459 Jul 24 04:22 838411c0-5e09-4ad0-ba04-8a8f216bf2a0_88559.1.job.log.tgz
[2021-07-24 04:22:43] -rw-------. 1 root root  1068585 Jul 24 04:06 agis_schedconf.cvmfs.json
[2021-07-24 04:22:43] -rw-r--r--. 1 root root        0 Jul 24 04:05 boinc_lockfile
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     8192 Jul 24 04:22 boinc_mmap_file
[2021-07-24 04:22:43] -rw-r--r--. 1 root root      532 Jul 24 04:18 boinc_task_state.xml
[2021-07-24 04:22:43] -rw-------. 1 root root  1961526 Jul 24 04:06 cric_ddmendpoints.json
[2021-07-24 04:22:43] -rw-r--r--. 1 root root 38217911 Jul 24 04:05 EVNT.04972714._000030.pool.root.1
[2021-07-24 04:22:43] -rw-------. 1 root root     8375 Jul 24 04:22 heartbeat.json
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     5910 Jul 24 04:05 init_data.xml
[2021-07-24 04:22:43] -rw-r--r--. 1 root root   350495 Jul 24 04:05 input.tar.gz
[2021-07-24 04:22:43] -rw-r--r--. 1 root root      112 Jul 24 04:05 job.xml
[2021-07-24 04:22:43] -rw-------. 1 root root      141 Jul 24 04:05 kqaMDmmcLRzn7Olcko1bjSoqABFKDmABFKDmumdXDmPIGKDmm7B2pn.diag
[2021-07-24 04:22:43] -rw-------. 1 root root     1017 Jul 24 04:22 memory_monitor_summary.json
[2021-07-24 04:22:43] -rw-------. 1 root root  2812282 Jul 24 04:21 output.1.838411c0-5e09-4ad0-ba04-8a8f216bf2a0_88559.pool.root
[2021-07-24 04:22:43] -rw-------. 1 root root      536 Jul 24 04:22 output.list
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     2613 Jul 24 04:05 pandaJob.out
[2021-07-24 04:22:43] drwxrwx---. 3 root root     4096 Jul 24 04:22 PanDA_Pilot-5129440837/
[2021-07-24 04:22:43] drwxr-xr-x. 4  320  320      260 Jul 24 04:06 pilot2/
[2021-07-24 04:22:43] -rw-r--r--. 1 root root   340725 Jul 24 02:30 pilot2.tar.gz
[2021-07-24 04:22:43] -rw-------. 1 root root   177834 Jul 24 04:22 pilotlog.txt
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     4534 Jul 24 03:27 queuedata.json
[2021-07-24 04:22:43] -rwxr-xr-x. 1 root root     6966 Jul 24 04:05 run_atlas*
[2021-07-24 04:22:43] -rwx------. 1 4871 1028    20591 Jul 24 03:27 runpilot2-wrapper.sh*
[2021-07-24 04:22:43] -rw-r--r--. 1 root root      407 Jul 24 04:05 runtime_log
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     6391 Jul 24 04:05 runtime_log.err
[2021-07-24 04:22:43] -rw-------. 1 root root      414 Jul 24 04:05 setup.sh.local
[2021-07-24 04:22:43] drwxrwx--x. 2 root root       68 Jul 24 04:05 shared/
[2021-07-24 04:22:43] -rw-r--r--. 1 root root    16551 Jul 24 04:05 start_atlas.sh
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     2197 Jul 24 04:05 stderr.txt
[2021-07-24 04:22:43] -rw-r--r--. 1 root root      107 Jul 24 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-24 04:22:43] -rw-r--r--. 1 root root       25 Jul 24 04:22 wrapper_checkpoint.txt
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,761 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,762 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,762 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,762 | INFO     | pilot.control.job                | has_job_completed         | job 5129440837 has completed (purged errors)
[2021-07-24 04:22:43] 2021-07-24 02:22:29,762 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-07-24 04:22:43] 2021-07-24 02:22:29,768 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /root/boinc/slots/0/PanDA_Pilot-5129440837
[2021-07-24 04:22:43] 2021-07-24 02:22:30,774 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [16823]
[2021-07-24 04:22:43] 2021-07-24 02:22:30,774 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 16823
[2021-07-24 04:22:43] 2021-07-24 02:22:30,774 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-07-24 04:22:43] 2021-07-24 02:22:31,779 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-07-24 04:22:43] 2021-07-24 02:22:31,780 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=16823
[2021-07-24 04:22:43] 2021-07-24 02:22:31,863 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [16823] (in reverse order)
[2021-07-24 04:22:43] 2021-07-24 02:22:31,936 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-07-24 04:22:43] 2021-07-24 02:22:31,937 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-07-24 04:22:43] 2021-07-24 02:22:31,937 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-07-24 04:22:43] 2021-07-24 02:22:31,937 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-07-24 04:22:43] 2021-07-24 02:22:31,937 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-07-24 04:22:43] 2021-07-24 02:22:31,938 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-07-24 04:22:43] 2021-07-24 02:22:31,939 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.3 (13)  ***
[2021-07-24 04:22:43] 2021-07-24 02:22:31,939 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-07-24 04:22:43] 2021-07-24 02:22:31,939 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-07-24 04:22:43] 2021-07-24 02:22:31,939 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | pilot is running in a VM
[2021-07-24 04:22:43] 2021-07-24 02:22:31,939 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-07-24 04:22:43] 2021-07-24 02:22:32,075 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-07-24 04:22:43] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-07-24 04:22:43] Distributor ID:	CentOS
[2021-07-24 04:22:43] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-07-24 04:22:43] Release:	7.8.2003
[2021-07-24 04:22:43] Codename:	Core
[2021-07-24 04:22:43] 2021-07-24 02:22:32,075 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-07-24 04:22:43] 2021-07-24 02:22:32,578 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /root/boinc/slots/0
[2021-07-24 04:22:43] 2021-07-24 02:22:32,610 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (27275558912 B)
[2021-07-24 04:22:43] 2021-07-24 02:22:32,610 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-07-24 04:22:43] 2021-07-24 02:22:32,611 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:32,611 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-07-24 04:22:43] 2021-07-24 02:22:32,611 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-07-24 04:22:43] 2021-07-24 02:22:32,611 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-07-24 04:22:43] 2021-07-24 02:22:32,611 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:32,613 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:32,613 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,025 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,026 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,062 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-07-24 04:22:43] 2021-07-24 02:22:33,062 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,062 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,088 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,088 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,130 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,130 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,536 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,536 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,536 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,537 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,569 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-07-24 04:22:43] 2021-07-24 02:22:33,570 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,570 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,612 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,612 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:33,665 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-07-24 04:22:43] 2021-07-24 02:22:33,666 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:33,666 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:34,024 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:34,025 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:34,255 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-07-24 04:22:43] 2021-07-24 02:22:34,255 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:34,256 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:35,112 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-07-24 04:22:43] 2021-07-24 02:22:38,114 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-07-24 04:22:43] 2021-07-24 02:22:38,114 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:42,024 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s)
[2021-07-24 04:22:43] 2021-07-24 02:22:42,025 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-07-24 04:22:43] 2021-07-24 02:22:42,025 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-07-24 04:22:43] 2021-07-24 02:22:42,025 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:42,757 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-07-24 04:22:43] 2021-07-24 02:22:42,758 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-07-24 04:22:43] 2021-07-24 02:22:42,758 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-07-24 04:22:43] 2021-07-24 02:22:42,823 [wrapper] ==== pilot stdout END ====
[2021-07-24 04:22:43] 2021-07-24 02:22:42,832 [wrapper] ==== wrapper stdout RESUME ====
[2021-07-24 04:22:43] 2021-07-24 02:22:42,840 [wrapper] Pilot exit status: 0
[2021-07-24 04:22:43] 2021-07-24 02:22:42,867 [wrapper] pandaids: 5129440837
[2021-07-24 04:22:43] 2021-07-24 02:22:42,880 [wrapper] apfmon messages muted
[2021-07-24 04:22:43] 2021-07-24 02:22:42,887 [wrapper] Test setup, not cleaning
[2021-07-24 04:22:43] 2021-07-24 02:22:42,894 [wrapper] ==== wrapper stdout END ====
[2021-07-24 04:22:43] 2021-07-24 02:22:42,901 [wrapper] ==== wrapper stderr END ====
[2021-07-24 04:22:43] 2021-07-24 02:22:42,913 [wrapper] wrapperexiting ec=0, duration=1021
[2021-07-24 04:22:43] 2021-07-24 02:22:42,920 [wrapper] apfmon messages muted
[2021-07-24 04:22:43]  *** Error codes and diagnostics ***
[2021-07-24 04:22:43]     "exeErrorCode": 0,
[2021-07-24 04:22:43]     "exeErrorDiag": "",
[2021-07-24 04:22:43]     "pilotErrorCode": 0,
[2021-07-24 04:22:43]     "pilotErrorDiag": "",
[2021-07-24 04:22:43]  *** Listing of results directory ***
[2021-07-24 04:22:43] total 49984
[2021-07-24 04:22:43] -rw-r--r--. 1 root root   340725 Jul 24 02:30 pilot2.tar.gz
[2021-07-24 04:22:43] -rwx------. 1 4871 1028    20591 Jul 24 03:27 runpilot2-wrapper.sh
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     4534 Jul 24 03:27 queuedata.json
[2021-07-24 04:22:43] -rw-r--r--. 1 root root      107 Jul 24 04:05 wrapper_26015_x86_64-pc-linux-gnu
[2021-07-24 04:22:43] -rwxr-xr-x. 1 root root     6966 Jul 24 04:05 run_atlas
[2021-07-24 04:22:43] -rw-r--r--. 1 root root      112 Jul 24 04:05 job.xml
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     5910 Jul 24 04:05 init_data.xml
[2021-07-24 04:22:43] drwxrwx--x. 2 root root       68 Jul 24 04:05 shared
[2021-07-24 04:22:43] -rw-r--r--. 1 root root        0 Jul 24 04:05 boinc_lockfile
[2021-07-24 04:22:43] -rw-r--r--. 1 root root 38217911 Jul 24 04:05 EVNT.04972714._000030.pool.root.1
[2021-07-24 04:22:43] -rw-r--r--. 1 root root    16551 Jul 24 04:05 start_atlas.sh
[2021-07-24 04:22:43] -rw-r--r--. 1 root root   350495 Jul 24 04:05 input.tar.gz
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     2613 Jul 24 04:05 pandaJob.out
[2021-07-24 04:22:43] -rw-------. 1 root root      414 Jul 24 04:05 setup.sh.local
[2021-07-24 04:22:43] -rw-------. 1 root root  1068585 Jul 24 04:06 agis_schedconf.cvmfs.json
[2021-07-24 04:22:43] -rw-------. 1 root root  1961526 Jul 24 04:06 cric_ddmendpoints.json
[2021-07-24 04:22:43] drwxr-xr-x. 4  320  320      260 Jul 24 04:06 pilot2
[2021-07-24 04:22:43] -rw-r--r--. 1 root root      532 Jul 24 04:18 boinc_task_state.xml
[2021-07-24 04:22:43] -rw-------. 1 root root  2812282 Jul 24 04:21 output.1.838411c0-5e09-4ad0-ba04-8a8f216bf2a0_88559.pool.root
[2021-07-24 04:22:43] -rw-------. 1 root root     1017 Jul 24 04:22 memory_monitor_summary.json
[2021-07-24 04:22:43] -rw-r--r--. 1 root root       25 Jul 24 04:22 wrapper_checkpoint.txt
[2021-07-24 04:22:43] -rw-r--r--. 1 root root     8192 Jul 24 04:22 boinc_mmap_file
[2021-07-24 04:22:43] -rw-------. 1 root root  1008459 Jul 24 04:22 838411c0-5e09-4ad0-ba04-8a8f216bf2a0_88559.1.job.log.tgz
[2021-07-24 04:22:43] -rw-------. 1 root root     8375 Jul 24 04:22 heartbeat.json
[2021-07-24 04:22:43] -rw-------. 1 root root     7636 Jul 24 04:22 pilotlog.txt
[2021-07-24 04:22:43] -rw-------. 1 root root   215707 Jul 24 04:22 838411c0-5e09-4ad0-ba04-8a8f216bf2a0_88559.1.job.log
[2021-07-24 04:22:43] -rw-------. 1 root root      536 Jul 24 04:22 output.list
[2021-07-24 04:22:43] -rw-r--r--. 1 root root      748 Jul 24 04:22 runtime_log
[2021-07-24 04:22:43] -rw-------. 1 root root  4055040 Jul 24 04:22 result.tar.gz
[2021-07-24 04:22:43] -rw-r--r--. 1 root root    10406 Jul 24 04:22 runtime_log.err
[2021-07-24 04:22:43] -rw-------. 1 root root      577 Jul 24 04:22 kqaMDmmcLRzn7Olcko1bjSoqABFKDmABFKDmumdXDmPIGKDmm7B2pn.diag
[2021-07-24 04:22:43] -rw-r--r--. 1 root root    29686 Jul 24 04:22 stderr.txt
[2021-07-24 04:22:43] HITS file was successfully produced:
[2021-07-24 04:22:43] -rw-------. 1 root root 2812282 Jul 24 04:21 shared/HITS.pool.root.1
[2021-07-24 04:22:43]  *** Contents of shared directory: ***
[2021-07-24 04:22:43] total 44396
[2021-07-24 04:22:43] -rw-r--r--. 1 root root 38217911 Jul 24 04:05 ATLAS.root_0
[2021-07-24 04:22:43] -rw-r--r--. 1 root root    16551 Jul 24 04:05 start_atlas.sh
[2021-07-24 04:22:43] -rw-r--r--. 1 root root   350495 Jul 24 04:05 input.tar.gz
[2021-07-24 04:22:43] -rw-------. 1 root root  2812282 Jul 24 04:21 HITS.pool.root.1
[2021-07-24 04:22:43] -rw-------. 1 root root  4055040 Jul 24 04:22 result.tar.gz
04:22:44 (9714): run_atlas exited; CPU time 249.743572
04:22:44 (9714): called boinc_finish(0)

</stderr_txt>
]]>


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