Name 45MKDmYuzYzn7Olcko1bjSoqABFKDmABFKDmumdXDmkkGKDmjCTHRo_0
Workunit 2119059
Created 14 Aug 2021, 3:56:16 UTC
Sent 14 Aug 2021, 3:56:32 UTC
Report deadline 21 Aug 2021, 3:56:32 UTC
Received 14 Aug 2021, 5:58:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 1 hours 46 min 18 sec
CPU time 53 min 44 sec
Validate state Valid
Credit 29.31
Device peak FLOPS 3.04 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.55 GB
Peak swap size 2.18 GB
Peak disk usage 83.08 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
23:56:51 (82324): wrapper (7.7.26015): starting
23:56:51 (82324): wrapper: running run_atlas (--nthreads 1)
[2021-08-13 23:56:51] Arguments: --nthreads 1
[2021-08-13 23:56:51] Threads: 1
[2021-08-13 23:56:51] Checking for CVMFS
[2021-08-13 23:56:52] Probing /cvmfs/atlas.cern.ch... OK
[2021-08-13 23:56:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-08-13 23:56:54] Running cvmfs_config stat atlas.cern.ch
[2021-08-13 23:56:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-08-13 23:56:55] 2.9.0.0 34499 129 47832 90218 2 64 4177458 4194304 693 130560 0 209715 99.986 4354 1141 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-08-13 23:56:55] CVMFS is ok
[2021-08-13 23:56:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-08-13 23:56:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-08-13 23:56:55] Small home clusters do not require a local http proxy but it is suggested if
[2021-08-13 23:56:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-08-13 23:56:55] Further information can be found at the LHC@home message board.
[2021-08-13 23:56:55] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-08-13 23:56:55] Checking for singularity binary...
[2021-08-13 23:56:55] Using singularity found in PATH at /usr/local/bin/singularity
[2021-08-13 23:56:55] Running /usr/local/bin/singularity --version
[2021-08-13 23:56:56] singularity version 3.7.2+10-ga969f0f8c
[2021-08-13 23:56:56] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-08-13 23:56:58] E5-2670
[2021-08-13 23:56:58] Singularity works
[2021-08-13 23:56:58] Starting ATLAS job with PandaID=5151116664
[2021-08-13 23:56:58] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/24 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-08-14 01:43:08]  *** The last 200 lines of the pilot log: ***
[2021-08-14 01:43:08]   }
[2021-08-14 01:43:08] }
[2021-08-14 01:43:08] 2021-08-14 05:42:08,865 | DEBUG    | pilot.user.atlas.utilities       | get_metadata_dict_from_txt | writing prmon dictionary to: /var/lib/boinc-client/slots/24/PanDA_Pilot-5151116664/memory_monitor_o
[2021-08-14 01:43:08] 2021-08-14 05:42:08,869 | INFO     | pilot.util.container             | execute                   | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X P
[2021-08-14 01:43:08] 2021-08-14 05:42:32,606 | DEBUG    | pilot.user.atlas.common          | update_server             | sent prmon JSON dictionary to logstash server
[2021-08-14 01:43:08] 2021-08-14 05:42:32,607 | DEBUG    | pilot.user.atlas.common          | update_server             | stdout: 
[2021-08-14 01:43:08] 2021-08-14 05:42:32,608 | DEBUG    | pilot.user.atlas.common          | update_server             | stderr:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
[2021-08-14 01:43:08]                                  Dload  Upload   Total   Spent    Left  Speed
[2021-08-14 01:43:08] 
[2021-08-14 01:43:08]   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0curl: (28) timed out before SSL handshake
[2021-08-14 01:43:08] 
[2021-08-14 01:43:08] 2021-08-14 05:42:32,609 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-08-14 01:43:08] 2021-08-14 05:42:32,609 | INFO     | pilot.control.job                | send_state                | job 5151116664 has finished - writing final server update
[2021-08-14 01:43:08] 2021-08-14 05:42:32,611 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 1
[2021-08-14 01:43:08] 2021-08-14 05:42:32,611 | WARNING  | pilot.user.atlas.common          | get_executor_dictionary   | no such key: executor
[2021-08-14 01:43:08] 2021-08-14 05:42:32,611 | WARNING  | pilot.user.atlas.common          | get_executor_dictionary   | no such key: executor
[2021-08-14 01:43:08] 2021-08-14 05:42:32,612 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -36031681 B to job metrics
[2021-08-14 01:43:08] 2021-08-14 05:42:32,619 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-08-14 01:43:08] 2021-08-14 05:42:32,620 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-08-14 01:43:08] 2021-08-14 05:42:32,622 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 230.10 B/s (using 92 data points, chi2=1924161)
[2021-08-14 01:43:08] 2021-08-14 05:42:32,625 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=3 nEvents=2 leak=230.10 chi2=1924161 eventnumber=5001"
[2021-08-14 01:43:08] 2021-08-14 05:42:32,625 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 6.121951
[2021-08-14 01:43:08] 2021-08-14 05:42:32,626 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-08-14 01:43:08] 2021-08-14 05:42:32,661 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-08-14 01:43:08] 2021-08-14 05:42:33,199 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/24/PanDA_Pilot-5151116664/memory_monitor_summary.json (trf n
[2021-08-14 01:43:08] 2021-08-14 05:42:33,202 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 3.979, 'nthreads': 4.959, 'pss': 1101208.0, 'rchar': 51229.0, 
[2021-08-14 01:43:08] 2021-08-14 05:42:33,203 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-08-14 01:43:08] 2021-08-14 05:42:33,203 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-08-14 01:43:08] 2021-08-14 05:42:33,203 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-08-14 01:43:08] 2021-08-14 05:42:33,203 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-08-14 01:43:08] 2021-08-14 05:42:33,203 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-08-14 01:43:08] 2021-08-14 05:42:33,204 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 3 s
[2021-08-14 01:43:08] 2021-08-14 05:42:33,204 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 80 s
[2021-08-14 01:43:08] 2021-08-14 05:42:33,204 | INFO     | pilot.util.timing                | timing_report             | . total setup = 83 s
[2021-08-14 01:43:08] 2021-08-14 05:42:33,204 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-08-14 01:43:08] 2021-08-14 05:42:33,204 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 6097 s
[2021-08-14 01:43:08] 2021-08-14 05:42:33,204 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 1 s
[2021-08-14 01:43:08] 2021-08-14 05:42:33,204 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-08-14 01:43:08] 2021-08-14 05:42:33,205 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-08-14 01:43:08] 2021-08-14 05:42:33,208 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5151116664', 'state': 'finished', 'timestamp': '2021-08-14T01:42:32
[2021-08-14 01:43:08] 2021-08-14 05:42:33,208 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/24/heartbeat.json
[2021-08-14 01:43:08] 2021-08-14 05:42:33,209 | DEBUG    | pilot.control.job                | queue_monitor             | job 5151116664 was dequeued from the monitored payloads queue
[2021-08-14 01:43:08] 2021-08-14 05:42:33,593 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-08-14 01:43:08] 2021-08-14 05:42:33,594 | INFO     | pilot.control.job                | make_job_report           | 
[2021-08-14 01:43:08] 2021-08-14 05:42:33,594 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-08-14 01:43:08] 2021-08-14 05:42:33,595 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-08-14 01:43:08] 2021-08-14 05:42:33,595 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5151116664
[2021-08-14 01:43:08] 2021-08-14 05:42:33,595 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-08-14 01:43:08] 2021-08-14 05:42:33,595 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-08-14 01:43:08] 2021-08-14 05:42:33,596 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-08-14 01:43:08] 2021-08-14 05:42:33,596 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-08-14 01:43:08] 2021-08-14 05:42:33,596 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-08-14 01:43:08] 2021-08-14 05:42:33,597 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-08-14 01:43:08] 2021-08-14 05:42:33,597 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-08-14 01:43:08] 2021-08-14 05:42:33,598 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-08-14 01:43:08] 2021-08-14 05:42:33,598 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-08-14 01:43:08] 2021-08-14 05:42:33,598 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 3371 s
[2021-08-14 01:43:08] 2021-08-14 05:42:33,598 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-08-14 01:43:08] 2021-08-14 05:42:33,598 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-08-14 01:43:08] 2021-08-14 05:42:33,599 | INFO     | pilot.control.job                | make_job_report           | pid: 106655
[2021-08-14 01:43:08] 2021-08-14 05:42:33,599 | INFO     | pilot.control.job                | make_job_report           | pgrp: 106655
[2021-08-14 01:43:08] 2021-08-14 05:42:33,599 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2021-08-14 01:43:08] 2021-08-14 05:42:33,599 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-08-14 01:43:08] 2021-08-14 05:42:33,599 | INFO     | pilot.control.job                | make_job_report           | sizes: {26646627: 3876377, 26646628: 3876656, 26646629: 3876598, 26646639: 3876598, 26652819: 390208
[2021-08-14 01:43:08] 2021-08-14 05:42:33,600 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-08-14 01:43:08] 2021-08-14 05:42:33,600 | INFO     | pilot.control.job                | make_job_report           | 
[2021-08-14 01:43:08] 2021-08-14 05:42:33,600 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/24:
[2021-08-14 01:43:08] 
[2021-08-14 01:43:08] 2021-08-14 05:42:33,600 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/24
[2021-08-14 01:43:08] 2021-08-14 05:42:34,510 | DEBUG    | pilot.control.job                | has_job_completed         | total 47048
[2021-08-14 01:43:08] -rw------- 1 boinc boinc      130 Aug 13 23:57 45MKDmYuzYzn7Olcko1bjSoqABFKDmABFKDmumdXDmkkGKDmjCTHRo.diag
[2021-08-14 01:43:08] -rw------- 1 boinc boinc   589827 Aug 14 01:42 87f60afd-8942-4b16-b5c3-bda2be47bffd_44031.1.job.log
[2021-08-14 01:43:08] -rw------- 1 boinc boinc   198581 Aug 14 01:42 87f60afd-8942-4b16-b5c3-bda2be47bffd_44031.1.job.log.tgz
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  1073508 Aug 13 23:58 agis_schedconf.cvmfs.json
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc        0 Aug 13 23:56 boinc_lockfile
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     8192 Aug 14 01:42 boinc_mmap_file
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc      534 Aug 14 01:40 boinc_task_state.xml
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  1943167 Aug 13 23:58 cric_ddmendpoints.json
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc 37224345 Aug 13 23:56 EVNT.04972714._000026.pool.root.1
[2021-08-14 01:43:08] -rw------- 1 boinc boinc     7097 Aug 14 01:42 heartbeat.json
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     6168 Aug 13 23:56 init_data.xml
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc   350488 Aug 13 23:56 input.tar.gz
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc      112 Aug 13 23:56 job.xml
[2021-08-14 01:43:08] -rw------- 1 boinc boinc     1014 Aug 14 01:41 memory_monitor_summary.json
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  5713192 Aug 14 01:40 output.1.87f60afd-8942-4b16-b5c3-bda2be47bffd_44031.pool.root
[2021-08-14 01:43:08] -rw------- 1 boinc boinc      536 Aug 14 01:42 output.list
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     2655 Aug 13 23:56 pandaJob.out
[2021-08-14 01:43:08] drwxrwx--- 2 boinc boinc     4096 Aug 14 01:42 PanDA_Pilot-5151116664/
[2021-08-14 01:43:08] drwx------ 4 boinc boinc     4096 Aug 13 23:58 pilot2/
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc   340725 Aug 13 23:28 pilot2.tar.gz
[2021-08-14 01:43:08] -rw------- 1 boinc boinc   570856 Aug 14 01:42 pilotlog.txt
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     3214 Aug 13 23:56 queuedata.json
[2021-08-14 01:43:08] -rwxr-xr-x 1 boinc boinc     6966 Aug 13 23:56 run_atlas*
[2021-08-14 01:43:08] -rwx------ 1 boinc boinc    20633 Aug 13 23:53 runpilot2-wrapper.sh*
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc      407 Aug 13 23:57 runtime_log
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     5574 Aug 13 23:57 runtime_log.err
[2021-08-14 01:43:08] drwxrwx--x 2 boinc boinc     4096 Aug 13 23:56 shared/
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc    16551 Aug 13 23:56 start_atlas.sh
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     2208 Aug 13 23:56 stderr.txt
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc      107 Aug 13 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc       26 Aug 14 01:42 wrapper_checkpoint.txt
[2021-08-14 01:43:08] 2021-08-14 05:42:34,511 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,512 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,512 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,512 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,513 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,513 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,513 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,514 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,514 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,514 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,515 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,515 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,515 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,515 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,516 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,516 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,516 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,516 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,517 | INFO     | pilot.control.job                | has_job_completed         | job 5151116664 has completed (purged errors)
[2021-08-14 01:43:08] 2021-08-14 05:42:34,517 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-08-14 01:43:08] 2021-08-14 05:42:34,529 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/24/PanDA_Pilot-5151116664
[2021-08-14 01:43:08] 2021-08-14 05:42:35,534 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [106655]
[2021-08-14 01:43:08] 2021-08-14 05:42:35,535 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 106655
[2021-08-14 01:43:08] 2021-08-14 05:42:35,536 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-08-14 01:43:08] 2021-08-14 05:42:36,541 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-08-14 01:43:08] 2021-08-14 05:42:36,542 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=106655
[2021-08-14 01:43:08] 2021-08-14 05:42:37,250 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [106655] (in reverse order)
[2021-08-14 01:43:08] 2021-08-14 05:42:38,611 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-08-14 01:43:08] 2021-08-14 05:42:38,612 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-08-14 01:43:08] 2021-08-14 05:42:38,612 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-08-14 01:43:08] 2021-08-14 05:42:38,612 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-08-14 01:43:08] 2021-08-14 05:42:38,613 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-08-14 01:43:08] 2021-08-14 05:42:38,614 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-14 01:43:08] 2021-08-14 05:42:38,614 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.3 (13)  ***
[2021-08-14 01:43:08] 2021-08-14 05:42:38,614 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-14 01:43:08] 2021-08-14 05:42:38,615 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-08-14 01:43:08] 2021-08-14 05:42:38,638 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-08-14 01:43:08] 2021-08-14 05:42:39,432 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-08-14 01:43:08] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-08-14 01:43:08] Distributor ID:	CentOS
[2021-08-14 01:43:08] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-08-14 01:43:08] Release:	7.8.2003
[2021-08-14 01:43:08] Codename:	Core
[2021-08-14 01:43:08] 2021-08-14 05:42:39,432 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-14 01:43:08] 2021-08-14 05:42:39,935 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/24
[2021-08-14 01:43:08] 2021-08-14 05:42:39,987 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (17825792000 B)
[2021-08-14 01:43:08] 2021-08-14 05:42:39,988 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-08-14 01:43:08] 2021-08-14 05:42:39,988 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:39,988 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,048 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-08-14 01:43:08] 2021-08-14 05:42:40,085 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-08-14 01:43:08] 2021-08-14 05:42:40,085 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,085 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,312 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,313 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,314 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,315 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,392 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-08-14 01:43:08] 2021-08-14 05:42:40,393 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,393 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,405 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,405 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,607 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,608 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,921 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,922 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,988 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-08-14 01:43:08] 2021-08-14 05:42:40,989 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,989 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:40,993 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:40,993 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:41,153 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:41,153 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:41,439 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-08-14 01:43:08] 2021-08-14 05:42:41,837 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-08-14 01:43:08] 2021-08-14 05:42:42,440 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:42,441 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:42,603 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-08-14 01:43:08] 2021-08-14 05:42:42,604 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:42,604 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:42:44,839 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-08-14 01:43:08] 2021-08-14 05:42:44,839 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:43:06,656 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 65 s)
[2021-08-14 01:43:08] 2021-08-14 05:43:06,657 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-08-14 01:43:08] 2021-08-14 05:43:06,657 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-08-14 01:43:08] 2021-08-14 05:43:06,657 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-08-14 01:43:08] 2021-08-14 05:43:07,096 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-08-14 01:43:08] 2021-08-14 05:43:07,097 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-08-14 01:43:08] 2021-08-14 05:43:07,097 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-08-14 01:43:08] 2021-08-14 05:43:07,269 [wrapper] ==== pilot stdout END ====
[2021-08-14 01:43:08] 2021-08-14 05:43:07,300 [wrapper] ==== wrapper stdout RESUME ====
[2021-08-14 01:43:08] 2021-08-14 05:43:07,332 [wrapper] Pilot exit status: 0
[2021-08-14 01:43:08] 2021-08-14 05:43:07,523 [wrapper] pandaids: 5151116664
[2021-08-14 01:43:08] 2021-08-14 05:43:07,583 [wrapper] apfmon messages muted
[2021-08-14 01:43:08] 2021-08-14 05:43:07,612 [wrapper] Test setup, not cleaning
[2021-08-14 01:43:08] 2021-08-14 05:43:07,643 [wrapper] ==== wrapper stdout END ====
[2021-08-14 01:43:08] 2021-08-14 05:43:07,675 [wrapper] ==== wrapper stderr END ====
[2021-08-14 01:43:08] 2021-08-14 05:43:07,735 [wrapper] wrapperexiting ec=0, duration=6365
[2021-08-14 01:43:08] 2021-08-14 05:43:07,767 [wrapper] apfmon messages muted
[2021-08-14 01:43:08]  *** Error codes and diagnostics ***
[2021-08-14 01:43:08]     "exeErrorCode": 0,
[2021-08-14 01:43:08]     "exeErrorDiag": "",
[2021-08-14 01:43:08]     "pilotErrorCode": 0,
[2021-08-14 01:43:08]     "pilotErrorDiag": "",
[2021-08-14 01:43:08]  *** Listing of results directory ***
[2021-08-14 01:43:08] total 52912
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc   340725 Aug 13 23:28 pilot2.tar.gz
[2021-08-14 01:43:08] -rwx------ 1 boinc boinc    20633 Aug 13 23:53 runpilot2-wrapper.sh
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     3214 Aug 13 23:56 queuedata.json
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc      107 Aug 13 23:56 wrapper_26015_x86_64-pc-linux-gnu
[2021-08-14 01:43:08] -rwxr-xr-x 1 boinc boinc     6966 Aug 13 23:56 run_atlas
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc      112 Aug 13 23:56 job.xml
[2021-08-14 01:43:08] drwxrwx--x 2 boinc boinc     4096 Aug 13 23:56 shared
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     6168 Aug 13 23:56 init_data.xml
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc        0 Aug 13 23:56 boinc_lockfile
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc 37224345 Aug 13 23:56 EVNT.04972714._000026.pool.root.1
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc    16551 Aug 13 23:56 start_atlas.sh
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc   350488 Aug 13 23:56 input.tar.gz
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     2655 Aug 13 23:56 pandaJob.out
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  1073508 Aug 13 23:58 agis_schedconf.cvmfs.json
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  1943167 Aug 13 23:58 cric_ddmendpoints.json
[2021-08-14 01:43:08] drwx------ 4 boinc boinc     4096 Aug 13 23:58 pilot2
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  5713192 Aug 14 01:40 output.1.87f60afd-8942-4b16-b5c3-bda2be47bffd_44031.pool.root
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc      534 Aug 14 01:40 boinc_task_state.xml
[2021-08-14 01:43:08] -rw------- 1 boinc boinc     1014 Aug 14 01:41 memory_monitor_summary.json
[2021-08-14 01:43:08] -rw------- 1 boinc boinc   198581 Aug 14 01:42 87f60afd-8942-4b16-b5c3-bda2be47bffd_44031.1.job.log.tgz
[2021-08-14 01:43:08] -rw------- 1 boinc boinc     7097 Aug 14 01:42 heartbeat.json
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     8192 Aug 14 01:43 boinc_mmap_file
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc       26 Aug 14 01:43 wrapper_checkpoint.txt
[2021-08-14 01:43:08] -rw------- 1 boinc boinc     7367 Aug 14 01:43 pilotlog.txt
[2021-08-14 01:43:08] -rw------- 1 boinc boinc   604506 Aug 14 01:43 87f60afd-8942-4b16-b5c3-bda2be47bffd_44031.1.job.log
[2021-08-14 01:43:08] -rw------- 1 boinc boinc      536 Aug 14 01:43 output.list
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc      748 Aug 14 01:43 runtime_log
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  6533120 Aug 14 01:43 result.tar.gz
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc     9429 Aug 14 01:43 runtime_log.err
[2021-08-14 01:43:08] -rw------- 1 boinc boinc      565 Aug 14 01:43 45MKDmYuzYzn7Olcko1bjSoqABFKDmABFKDmumdXDmkkGKDmjCTHRo.diag
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc    30443 Aug 14 01:43 stderr.txt
[2021-08-14 01:43:08] HITS file was successfully produced:
[2021-08-14 01:43:08] -rw------- 1 boinc boinc 5713192 Aug 14 01:40 shared/HITS.pool.root.1
[2021-08-14 01:43:08]  *** Contents of shared directory: ***
[2021-08-14 01:43:08] total 48676
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc    16551 Aug 13 23:56 start_atlas.sh
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc   350488 Aug 13 23:56 input.tar.gz
[2021-08-14 01:43:08] -rw-r--r-- 1 boinc boinc 37224345 Aug 13 23:56 ATLAS.root_0
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  5713192 Aug 14 01:40 HITS.pool.root.1
[2021-08-14 01:43:08] -rw------- 1 boinc boinc  6533120 Aug 14 01:43 result.tar.gz
01:43:09 (82324): run_atlas exited; CPU time 3224.709401
01:43:09 (82324): called boinc_finish(0)

</stderr_txt>
]]>


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