Name | ajbNDmqtfZzn7Olcko1bjSoqABFKDmABFKDmumdXDmwoGKDm1E3aqn_0 |
Workunit | 2119445 |
Created | 16 Aug 2021, 0:43:20 UTC |
Sent | 16 Aug 2021, 0:49:33 UTC |
Report deadline | 23 Aug 2021, 0:49:33 UTC |
Received | 16 Aug 2021, 1:52:58 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 44 min 5 sec |
CPU time | 21 min 8 sec |
Validate state | Valid |
Credit | 11.19 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.39 GB |
Peak swap size | 34.82 GB |
Peak disk usage | 83.88 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 20:49:56 (140912): wrapper (7.7.26015): starting 20:49:56 (140912): wrapper: running run_atlas (--nthreads 1) [2021-08-15 20:49:56] Arguments: --nthreads 1 [2021-08-15 20:49:56] Threads: 1 [2021-08-15 20:49:56] Checking for CVMFS [2021-08-15 20:49:56] Probing /cvmfs/atlas.cern.ch... OK [2021-08-15 20:49:57] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-08-15 20:49:57] Running cvmfs_config stat atlas.cern.ch [2021-08-15 20:49:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-08-15 20:49:57] 2.9.0.0 101151 6 40100 90329 1 87 2815176 4194304 596 130560 0 42795 96.858 112635 1869 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-08-15 20:49:57] CVMFS is ok [2021-08-15 20:49:57] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-08-15 20:49:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-08-15 20:49:57] Small home clusters do not require a local http proxy but it is suggested if [2021-08-15 20:49:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-08-15 20:49:57] Further information can be found at the LHC@home message board. [2021-08-15 20:49:57] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-08-15 20:49:57] Checking for singularity binary... [2021-08-15 20:49:57] Using singularity found in PATH at /usr/local/bin/singularity [2021-08-15 20:49:57] Running /usr/local/bin/singularity --version [2021-08-15 20:49:57] singularity version 3.7.2+10-ga969f0f8c [2021-08-15 20:49:57] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-08-15 20:49:58] E5-2670 [2021-08-15 20:49:58] Singularity works [2021-08-15 20:49:58] Starting ATLAS job with PandaID=5152939754 [2021-08-15 20:49:58] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/73 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-08-15 21:33:57] *** The last 200 lines of the pilot log: *** [2021-08-15 21:33:57] "transform": { [2021-08-15 21:33:57] "cpuEfficiency": 0.4992, [2021-08-15 21:33:57] "cpuPWEfficiency": 0.4992, [2021-08-15 21:33:57] "cpuTime": 5, [2021-08-15 21:33:57] "cpuTimeTotal": 1248, [2021-08-15 21:33:57] "externalCpuTime": 14, [2021-08-15 21:33:57] "processedEvents": 2, [2021-08-15 21:33:57] "trfPredata": null, [2021-08-15 21:33:57] "wallTime": 2482 [2021-08-15 21:33:57] } [2021-08-15 21:33:57] } [2021-08-15 21:33:57] } [2021-08-15 21:33:57] 2021-08-16 01:33:46,855 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-08-15 21:33:57] 2021-08-16 01:33:46,855 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-08-15 21:33:57] 2021-08-16 01:33:46,855 | INFO | pilot.control.job | send_state | job 5152939754 has finished - writing final server update [2021-08-15 21:33:57] 2021-08-16 01:33:46,855 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-08-15 21:33:57] 2021-08-16 01:33:46,856 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -38640003 B to job metrics [2021-08-15 21:33:57] 2021-08-16 01:33:46,857 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-08-15 21:33:57] 2021-08-16 01:33:46,857 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-08-15 21:33:57] 2021-08-16 01:33:46,857 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 378.71 B/s (using 34 data points, chi2=331940) [2021-08-15 21:33:57] 2021-08-16 01:33:46,858 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=3 nEvents=2 dbTime=207.67 dbData=4274626 leak=378.71 chi2=331940 eventn [2021-08-15 21:33:57] 2021-08-16 01:33:46,858 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.205882 [2021-08-15 21:33:57] 2021-08-16 01:33:46,858 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-08-15 21:33:57] 2021-08-16 01:33:46,877 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-08-15 21:33:57] 2021-08-16 01:33:47,008 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/73/PanDA_Pilot-5152939754/memory_monitor_summary.json (trf n [2021-08-15 21:33:57] 2021-08-16 01:33:47,014 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.121, 'nthreads': 6.097, 'pss': 1165871.0, 'rchar': 262230.0, [2021-08-15 21:33:57] 2021-08-16 01:33:47,014 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-08-15 21:33:57] 2021-08-16 01:33:47,014 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-08-15 21:33:57] 2021-08-16 01:33:47,014 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-15 21:33:57] 2021-08-16 01:33:47,014 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-08-15 21:33:57] 2021-08-16 01:33:47,014 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-08-15 21:33:57] 2021-08-16 01:33:47,014 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-08-15 21:33:57] 2021-08-16 01:33:47,015 | INFO | pilot.util.timing | timing_report | . payload setup = 32 s [2021-08-15 21:33:57] 2021-08-16 01:33:47,015 | INFO | pilot.util.timing | timing_report | . total setup = 33 s [2021-08-15 21:33:57] 2021-08-16 01:33:47,015 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-08-15 21:33:57] 2021-08-16 01:33:47,015 | INFO | pilot.util.timing | timing_report | . payload execution = 2527 s [2021-08-15 21:33:57] 2021-08-16 01:33:47,015 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-08-15 21:33:57] 2021-08-16 01:33:47,015 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-15 21:33:57] 2021-08-16 01:33:47,015 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-08-15 21:33:57] 2021-08-16 01:33:47,016 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5152939754', 'state': 'finished', 'timestamp': '2021-08-15T21:33:46 [2021-08-15 21:33:57] 2021-08-16 01:33:47,021 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/73/heartbeat.json [2021-08-15 21:33:57] 2021-08-16 01:33:47,021 | DEBUG | pilot.control.job | queue_monitor | job 5152939754 was dequeued from the monitored payloads queue [2021-08-15 21:33:57] 2021-08-16 01:33:47,189 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-08-15 21:33:57] 2021-08-16 01:33:47,312 | INFO | pilot.control.job | make_job_report | [2021-08-15 21:33:57] 2021-08-16 01:33:47,312 | INFO | pilot.control.job | make_job_report | job summary report [2021-08-15 21:33:57] 2021-08-16 01:33:47,312 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-15 21:33:57] 2021-08-16 01:33:47,312 | INFO | pilot.control.job | make_job_report | PanDA job id: 5152939754 [2021-08-15 21:33:57] 2021-08-16 01:33:47,313 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-08-15 21:33:57] 2021-08-16 01:33:47,313 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-08-15 21:33:57] 2021-08-16 01:33:47,313 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-08-15 21:33:57] 2021-08-16 01:33:47,313 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-08-15 21:33:57] 2021-08-16 01:33:47,313 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-08-15 21:33:57] 2021-08-16 01:33:47,313 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-08-15 21:33:57] 2021-08-16 01:33:47,313 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-08-15 21:33:57] 2021-08-16 01:33:47,313 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1312 s [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | pid: 1949 [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | pgrp: 1949 [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | event service: False [2021-08-15 21:33:57] 2021-08-16 01:33:47,314 | INFO | pilot.control.job | make_job_report | sizes: {26808139: 3876258, 26808140: 3876423, 26808151: 3876423, 26810715: 3899113, 26810717: 390857 [2021-08-15 21:33:57] 2021-08-16 01:33:47,315 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-15 21:33:57] 2021-08-16 01:33:47,315 | INFO | pilot.control.job | make_job_report | [2021-08-15 21:33:57] 2021-08-16 01:33:47,315 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/73: [2021-08-15 21:33:57] [2021-08-15 21:33:57] 2021-08-16 01:33:47,315 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/73 [2021-08-15 21:33:57] 2021-08-16 01:33:47,371 | DEBUG | pilot.control.job | has_job_completed | total 44740 [2021-08-15 21:33:57] -rw------- 1 boinc boinc 298932 Aug 15 21:33 89df7147-eb5e-481c-8152-d56a3041117a_8944.1.job.log [2021-08-15 21:33:57] -rw------- 1 boinc boinc 180826 Aug 15 21:33 89df7147-eb5e-481c-8152-d56a3041117a_8944.1.job.log.tgz [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1080145 Aug 15 20:50 agis_schedconf.cvmfs.json [2021-08-15 21:33:57] -rw------- 1 boinc boinc 130 Aug 15 20:49 ajbNDmqtfZzn7Olcko1bjSoqABFKDmABFKDmumdXDmwoGKDm1E3aqn.diag [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 0 Aug 15 20:49 boinc_lockfile [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 8192 Aug 15 21:33 boinc_mmap_file [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 535 Aug 15 21:33 boinc_task_state.xml [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1943167 Aug 15 20:50 cric_ddmendpoints.json [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 39611081 Aug 15 20:49 EVNT.04972714._000022.pool.root.1 [2021-08-15 21:33:57] -rw------- 1 boinc boinc 7342 Aug 15 21:33 heartbeat.json [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 6168 Aug 15 20:49 init_data.xml [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 354325 Aug 15 20:49 input.tar.gz [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 112 Aug 15 20:49 job.xml [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1018 Aug 15 21:33 memory_monitor_summary.json [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1549101 Aug 15 21:33 output.1.89df7147-eb5e-481c-8152-d56a3041117a_8944.pool.root [2021-08-15 21:33:57] -rw------- 1 boinc boinc 532 Aug 15 21:33 output.list [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 2594 Aug 15 20:49 pandaJob.out [2021-08-15 21:33:57] drwxrwx--- 2 boinc boinc 4096 Aug 15 21:33 PanDA_Pilot-5152939754/ [2021-08-15 21:33:57] drwx------ 4 boinc boinc 4096 Aug 15 20:50 pilot2/ [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 344503 Aug 13 08:13 pilot2.tar.gz [2021-08-15 21:33:57] -rw------- 1 boinc boinc 279844 Aug 15 21:33 pilotlog.txt [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 3214 Aug 15 20:41 queuedata.json [2021-08-15 21:33:57] -rwxr-xr-x 1 boinc boinc 6966 Aug 15 20:49 run_atlas* [2021-08-15 21:33:57] -rwx------ 1 boinc boinc 20631 Aug 15 20:43 runpilot2-wrapper.sh* [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 407 Aug 15 20:49 runtime_log [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 5577 Aug 15 20:49 runtime_log.err [2021-08-15 21:33:57] drwxrwx--x 2 boinc boinc 4096 Aug 15 20:49 shared/ [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 16565 Aug 15 20:49 start_atlas.sh [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 2210 Aug 15 20:49 stderr.txt [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 107 Aug 15 20:49 wrapper_26015_x86_64-pc-linux-gnu [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 26 Aug 15 21:33 wrapper_checkpoint.txt [2021-08-15 21:33:57] 2021-08-16 01:33:47,372 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,372 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,372 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,372 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,372 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,372 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,372 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,372 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,373 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,374 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-08-15 21:33:57] 2021-08-16 01:33:47,374 | INFO | pilot.control.job | has_job_completed | job 5152939754 has completed (purged errors) [2021-08-15 21:33:57] 2021-08-16 01:33:47,374 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-08-15 21:33:57] 2021-08-16 01:33:47,376 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/73/PanDA_Pilot-5152939754 [2021-08-15 21:33:57] 2021-08-16 01:33:48,380 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [1949] [2021-08-15 21:33:57] 2021-08-16 01:33:48,380 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 1949 [2021-08-15 21:33:57] 2021-08-16 01:33:48,381 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-08-15 21:33:57] 2021-08-16 01:33:49,385 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-08-15 21:33:57] 2021-08-16 01:33:49,385 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=1949 [2021-08-15 21:33:57] 2021-08-16 01:33:49,599 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [1949] (in reverse order) [2021-08-15 21:33:57] 2021-08-16 01:33:49,837 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-08-15 21:33:57] 2021-08-16 01:33:49,838 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-08-15 21:33:57] 2021-08-16 01:33:49,838 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-08-15 21:33:57] 2021-08-16 01:33:49,838 | INFO | pilot.control.job | retrieve | ready for new job [2021-08-15 21:33:57] 2021-08-16 01:33:49,838 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-08-15 21:33:57] 2021-08-16 01:33:49,839 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-15 21:33:57] 2021-08-16 01:33:49,839 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.4 (12) *** [2021-08-15 21:33:57] 2021-08-16 01:33:49,839 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-15 21:33:57] 2021-08-16 01:33:49,839 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-08-15 21:33:57] 2021-08-16 01:33:49,862 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-08-15 21:33:57] 2021-08-16 01:33:50,303 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-08-15 21:33:57] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-08-15 21:33:57] Distributor ID: CentOS [2021-08-15 21:33:57] Description: CentOS Linux release 7.8.2003 (Core) [2021-08-15 21:33:57] Release: 7.8.2003 [2021-08-15 21:33:57] Codename: Core [2021-08-15 21:33:57] 2021-08-16 01:33:50,304 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-15 21:33:57] 2021-08-16 01:33:50,809 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/73 [2021-08-15 21:33:57] 2021-08-16 01:33:50,881 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (22852665344 B) [2021-08-15 21:33:57] 2021-08-16 01:33:50,882 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-08-15 21:33:57] 2021-08-16 01:33:50,882 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:50,882 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:50,894 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:50,895 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:51,312 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-08-15 21:33:57] 2021-08-16 01:33:51,352 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:51,352 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:51,611 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-08-15 21:33:57] 2021-08-16 01:33:51,612 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:51,612 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:51,708 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:51,710 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:51,792 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:51,793 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:51,947 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-08-15 21:33:57] 2021-08-16 01:33:51,948 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:51,948 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:51,956 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:51,957 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:52,015 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-08-15 21:33:57] 2021-08-16 01:33:52,056 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-08-15 21:33:57] 2021-08-16 01:33:52,057 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:52,057 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:52,148 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:52,148 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:52,204 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-08-15 21:33:57] 2021-08-16 01:33:52,204 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:52,204 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:52,374 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:52,374 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:52,864 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-08-15 21:33:57] 2021-08-16 01:33:53,015 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:53,016 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:55,128 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 75 s) [2021-08-15 21:33:57] 2021-08-16 01:33:55,129 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet [2021-08-15 21:33:57] 2021-08-16 01:33:55,129 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:55,876 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-08-15 21:33:57] 2021-08-16 01:33:55,877 | DEBUG | pilot.control.data | queue_monitoring | will proceed to set job_aborted [2021-08-15 21:33:57] 2021-08-16 01:33:55,877 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-08-15 21:33:57] 2021-08-16 01:33:56,256 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-08-15 21:33:57] 2021-08-16 01:33:56,260 | INFO | root | wrap_up | traces error code: 0 [2021-08-15 21:33:57] 2021-08-16 01:33:56,261 | INFO | root | wrap_up | pilot has finished [2021-08-15 21:33:57] 2021-08-16 01:33:56,339 [wrapper] ==== pilot stdout END ==== [2021-08-15 21:33:57] 2021-08-16 01:33:56,385 [wrapper] ==== wrapper stdout RESUME ==== [2021-08-15 21:33:57] 2021-08-16 01:33:56,419 [wrapper] Pilot exit status: 0 [2021-08-15 21:33:57] 2021-08-16 01:33:56,480 [wrapper] pandaids: 5152939754 [2021-08-15 21:33:57] 2021-08-16 01:33:56,518 [wrapper] apfmon messages muted [2021-08-15 21:33:57] 2021-08-16 01:33:56,543 [wrapper] Test setup, not cleaning [2021-08-15 21:33:57] 2021-08-16 01:33:56,606 [wrapper] ==== wrapper stdout END ==== [2021-08-15 21:33:57] 2021-08-16 01:33:56,645 [wrapper] ==== wrapper stderr END ==== [2021-08-15 21:33:57] 2021-08-16 01:33:56,713 [wrapper] wrapperexiting ec=0, duration=2637 [2021-08-15 21:33:57] 2021-08-16 01:33:56,734 [wrapper] apfmon messages muted [2021-08-15 21:33:57] *** Error codes and diagnostics *** [2021-08-15 21:33:57] "exeErrorCode": 0, [2021-08-15 21:33:57] "exeErrorDiag": "", [2021-08-15 21:33:57] "pilotErrorCode": 0, [2021-08-15 21:33:57] "pilotErrorDiag": "", [2021-08-15 21:33:57] *** Listing of results directory *** [2021-08-15 21:33:57] total 46532 [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 344503 Aug 13 08:13 pilot2.tar.gz [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 3214 Aug 15 20:41 queuedata.json [2021-08-15 21:33:57] -rwx------ 1 boinc boinc 20631 Aug 15 20:43 runpilot2-wrapper.sh [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 107 Aug 15 20:49 wrapper_26015_x86_64-pc-linux-gnu [2021-08-15 21:33:57] -rwxr-xr-x 1 boinc boinc 6966 Aug 15 20:49 run_atlas [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 112 Aug 15 20:49 job.xml [2021-08-15 21:33:57] drwxrwx--x 2 boinc boinc 4096 Aug 15 20:49 shared [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 6168 Aug 15 20:49 init_data.xml [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 0 Aug 15 20:49 boinc_lockfile [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 16565 Aug 15 20:49 start_atlas.sh [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 354325 Aug 15 20:49 input.tar.gz [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 39611081 Aug 15 20:49 EVNT.04972714._000022.pool.root.1 [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 2594 Aug 15 20:49 pandaJob.out [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1080145 Aug 15 20:50 agis_schedconf.cvmfs.json [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1943167 Aug 15 20:50 cric_ddmendpoints.json [2021-08-15 21:33:57] drwx------ 4 boinc boinc 4096 Aug 15 20:50 pilot2 [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1549101 Aug 15 21:33 output.1.89df7147-eb5e-481c-8152-d56a3041117a_8944.pool.root [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1018 Aug 15 21:33 memory_monitor_summary.json [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 535 Aug 15 21:33 boinc_task_state.xml [2021-08-15 21:33:57] -rw------- 1 boinc boinc 180826 Aug 15 21:33 89df7147-eb5e-481c-8152-d56a3041117a_8944.1.job.log.tgz [2021-08-15 21:33:57] -rw------- 1 boinc boinc 7342 Aug 15 21:33 heartbeat.json [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 8192 Aug 15 21:33 boinc_mmap_file [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 26 Aug 15 21:33 wrapper_checkpoint.txt [2021-08-15 21:33:57] -rw------- 1 boinc boinc 7367 Aug 15 21:33 pilotlog.txt [2021-08-15 21:33:57] -rw------- 1 boinc boinc 313600 Aug 15 21:33 89df7147-eb5e-481c-8152-d56a3041117a_8944.1.job.log [2021-08-15 21:33:57] -rw------- 1 boinc boinc 532 Aug 15 21:33 output.list [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 744 Aug 15 21:33 runtime_log [2021-08-15 21:33:57] -rw------- 1 boinc boinc 2068480 Aug 15 21:33 result.tar.gz [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 9400 Aug 15 21:33 runtime_log.err [2021-08-15 21:33:57] -rw------- 1 boinc boinc 563 Aug 15 21:33 ajbNDmqtfZzn7Olcko1bjSoqABFKDmABFKDmumdXDmwoGKDm1E3aqn.diag [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 29547 Aug 15 21:33 stderr.txt [2021-08-15 21:33:57] HITS file was successfully produced: [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1549101 Aug 15 21:33 shared/HITS.pool.root.1 [2021-08-15 21:33:57] *** Contents of shared directory: *** [2021-08-15 21:33:57] total 42588 [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 16565 Aug 15 20:49 start_atlas.sh [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 354325 Aug 15 20:49 input.tar.gz [2021-08-15 21:33:57] -rw-r--r-- 1 boinc boinc 39611081 Aug 15 20:49 ATLAS.root_0 [2021-08-15 21:33:57] -rw------- 1 boinc boinc 1549101 Aug 15 21:33 HITS.pool.root.1 [2021-08-15 21:33:57] -rw------- 1 boinc boinc 2068480 Aug 15 21:33 result.tar.gz 21:33:59 (140912): run_atlas exited; CPU time 1268.441090 21:33:59 (140912): called boinc_finish(0) </stderr_txt> ]]>
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