Name | ELqLDmN6zZzn7Olcko1bjSoqABFKDmABFKDmumdXDmwqGKDmRaLlim_0 |
Workunit | 2119609 |
Created | 16 Aug 2021, 22:17:36 UTC |
Sent | 16 Aug 2021, 22:18:05 UTC |
Report deadline | 23 Aug 2021, 22:18:05 UTC |
Received | 16 Aug 2021, 23:03:42 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 45 min 3 sec |
CPU time | 19 min 2 sec |
Validate state | Valid |
Credit | 11.85 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.50 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 80.60 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 18:18:29 (13155): wrapper (7.7.26015): starting 18:18:29 (13155): wrapper: running run_atlas (--nthreads 1) [2021-08-16 18:18:29] Arguments: --nthreads 1 [2021-08-16 18:18:29] Threads: 1 [2021-08-16 18:18:29] Checking for CVMFS [2021-08-16 18:18:30] Probing /cvmfs/atlas.cern.ch... OK [2021-08-16 18:18:30] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-08-16 18:18:30] Running cvmfs_config stat atlas.cern.ch [2021-08-16 18:18:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-08-16 18:18:30] 2.9.0.0 57941 56 46740 90392 0 58 3220212 4194304 672 130560 0 181220 99.990 6214 2032 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-08-16 18:18:30] CVMFS is ok [2021-08-16 18:18:30] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-08-16 18:18:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-08-16 18:18:30] Small home clusters do not require a local http proxy but it is suggested if [2021-08-16 18:18:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-08-16 18:18:30] Further information can be found at the LHC@home message board. [2021-08-16 18:18:30] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-08-16 18:18:30] Checking for singularity binary... [2021-08-16 18:18:30] Using singularity found in PATH at /usr/local/bin/singularity [2021-08-16 18:18:30] Running /usr/local/bin/singularity --version [2021-08-16 18:18:30] singularity version 3.7.2+10-ga969f0f8c [2021-08-16 18:18:30] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-08-16 18:18:31] E5-2670 [2021-08-16 18:18:31] Singularity works [2021-08-16 18:18:31] Starting ATLAS job with PandaID=5154455326 [2021-08-16 18:18:31] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/48 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-08-16 19:03:29] *** The last 200 lines of the pilot log: *** [2021-08-16 19:03:29] "transform": { [2021-08-16 19:03:29] "cpuEfficiency": 0.4328, [2021-08-16 19:03:29] "cpuPWEfficiency": 0.4328, [2021-08-16 19:03:29] "cpuTime": 5, [2021-08-16 19:03:29] "cpuTimeTotal": 1121, [2021-08-16 19:03:29] "externalCpuTime": 15, [2021-08-16 19:03:29] "processedEvents": 2, [2021-08-16 19:03:29] "trfPredata": null, [2021-08-16 19:03:29] "wallTime": 2567 [2021-08-16 19:03:29] } [2021-08-16 19:03:29] } [2021-08-16 19:03:29] } [2021-08-16 19:03:29] 2021-08-16 23:03:01,741 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-08-16 19:03:29] 2021-08-16 23:03:01,741 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-08-16 19:03:29] 2021-08-16 23:03:01,742 | INFO | pilot.control.job | send_state | job 5154455326 has finished - writing final server update [2021-08-16 19:03:29] 2021-08-16 23:03:01,742 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-08-16 19:03:29] 2021-08-16 23:03:01,742 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36881629 B to job metrics [2021-08-16 19:03:29] 2021-08-16 23:03:01,743 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-08-16 19:03:29] 2021-08-16 23:03:01,743 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-08-16 19:03:29] 2021-08-16 23:03:01,744 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 441.23 B/s (using 36 data points, chi2=299468) [2021-08-16 19:03:29] 2021-08-16 23:03:01,745 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=4 nEvents=2 dbTime=220.86 dbData=4274626 leak=441.23 chi2=299468 eventn [2021-08-16 19:03:29] 2021-08-16 23:03:01,745 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.114286 [2021-08-16 19:03:29] 2021-08-16 23:03:01,745 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-08-16 19:03:29] 2021-08-16 23:03:01,769 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-08-16 19:03:29] 2021-08-16 23:03:01,816 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/48/PanDA_Pilot-5154455326/memory_monitor_summary.json (trf n [2021-08-16 19:03:29] 2021-08-16 23:03:01,817 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.069, 'nthreads': 6.046, 'pss': 1216220.0, 'rchar': 251746.0, [2021-08-16 19:03:29] 2021-08-16 23:03:01,818 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-08-16 19:03:29] 2021-08-16 23:03:01,818 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-08-16 19:03:29] 2021-08-16 23:03:01,818 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-16 19:03:29] 2021-08-16 23:03:01,818 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-08-16 19:03:29] 2021-08-16 23:03:01,818 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-08-16 19:03:29] 2021-08-16 23:03:01,818 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-08-16 19:03:29] 2021-08-16 23:03:01,818 | INFO | pilot.util.timing | timing_report | . payload setup = 22 s [2021-08-16 19:03:29] 2021-08-16 23:03:01,818 | INFO | pilot.util.timing | timing_report | . total setup = 23 s [2021-08-16 19:03:29] 2021-08-16 23:03:01,819 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-08-16 19:03:29] 2021-08-16 23:03:01,819 | INFO | pilot.util.timing | timing_report | . payload execution = 2598 s [2021-08-16 19:03:29] 2021-08-16 23:03:01,819 | INFO | pilot.util.timing | timing_report | . stage-out = 1 s [2021-08-16 19:03:29] 2021-08-16 23:03:01,819 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-16 19:03:29] 2021-08-16 23:03:01,819 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-08-16 19:03:29] 2021-08-16 23:03:01,820 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5154455326', 'state': 'finished', 'timestamp': '2021-08-16T19:03:01 [2021-08-16 19:03:29] 2021-08-16 23:03:01,820 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/48/heartbeat.json [2021-08-16 19:03:29] 2021-08-16 23:03:01,821 | DEBUG | pilot.control.job | queue_monitor | job 5154455326 was dequeued from the monitored payloads queue [2021-08-16 19:03:29] 2021-08-16 23:03:01,978 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | job summary report [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | PanDA job id: 5154455326 [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-08-16 19:03:29] 2021-08-16 23:03:01,979 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-08-16 19:03:29] 2021-08-16 23:03:01,980 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-08-16 19:03:29] 2021-08-16 23:03:01,980 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-08-16 19:03:29] 2021-08-16 23:03:01,980 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-08-16 19:03:29] 2021-08-16 23:03:01,980 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-08-16 19:03:29] 2021-08-16 23:03:01,980 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1184 s [2021-08-16 19:03:29] 2021-08-16 23:03:01,980 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-08-16 19:03:29] 2021-08-16 23:03:01,980 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-08-16 19:03:29] 2021-08-16 23:03:01,980 | INFO | pilot.control.job | make_job_report | pid: 22568 [2021-08-16 19:03:29] 2021-08-16 23:03:01,981 | INFO | pilot.control.job | make_job_report | pgrp: 22568 [2021-08-16 19:03:29] 2021-08-16 23:03:01,981 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-08-16 19:03:29] 2021-08-16 23:03:01,981 | INFO | pilot.control.job | make_job_report | event service: False [2021-08-16 19:03:29] 2021-08-16 23:03:01,981 | INFO | pilot.control.job | make_job_report | sizes: {26885437: 3876211, 26885438: 3876380, 26885439: 3876488, 26885449: 3876488, 26888070: 390091 [2021-08-16 19:03:29] 2021-08-16 23:03:01,981 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-16 19:03:29] 2021-08-16 23:03:01,981 | INFO | pilot.control.job | make_job_report | [2021-08-16 19:03:29] 2021-08-16 23:03:01,981 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/48: [2021-08-16 19:03:29] [2021-08-16 19:03:29] 2021-08-16 23:03:01,981 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/48 [2021-08-16 19:03:29] 2021-08-16 23:03:02,012 | DEBUG | pilot.control.job | has_job_completed | total 43404 [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1078724 Aug 16 18:19 agis_schedconf.cvmfs.json [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 0 Aug 16 18:18 boinc_lockfile [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 8192 Aug 16 19:02 boinc_mmap_file [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 534 Aug 16 19:02 boinc_task_state.xml [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1943167 Aug 16 18:19 cric_ddmendpoints.json [2021-08-16 19:03:29] -rw------- 1 boinc boinc 312769 Aug 16 19:03 dff2228d-ad9d-4284-8fe2-d9fdb107bcc5_9283.1.job.log [2021-08-16 19:03:29] -rw------- 1 boinc boinc 183262 Aug 16 19:02 dff2228d-ad9d-4284-8fe2-d9fdb107bcc5_9283.1.job.log.tgz [2021-08-16 19:03:29] -rw------- 1 boinc boinc 130 Aug 16 18:18 ELqLDmN6zZzn7Olcko1bjSoqABFKDmABFKDmumdXDmwqGKDmRaLlim.diag [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 37965264 Aug 16 18:18 EVNT.04972714._000027.pool.root.1 [2021-08-16 19:03:29] -rw------- 1 boinc boinc 8709 Aug 16 19:03 heartbeat.json [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 6168 Aug 16 18:18 init_data.xml [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 350488 Aug 16 18:18 input.tar.gz [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 112 Aug 16 18:18 job.xml [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1017 Aug 16 19:02 memory_monitor_summary.json [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1808597 Aug 16 19:02 output.1.dff2228d-ad9d-4284-8fe2-d9fdb107bcc5_9283.pool.root [2021-08-16 19:03:29] -rw------- 1 boinc boinc 532 Aug 16 19:02 output.list [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 2607 Aug 16 18:18 pandaJob.out [2021-08-16 19:03:29] drwxrwx--- 2 boinc boinc 4096 Aug 16 19:02 PanDA_Pilot-5154455326/ [2021-08-16 19:03:29] drwx------ 4 boinc boinc 4096 Aug 16 18:19 pilot2/ [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 340725 Aug 16 17:25 pilot2.tar.gz [2021-08-16 19:03:29] -rw------- 1 boinc boinc 293798 Aug 16 19:03 pilotlog.txt [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 3214 Aug 16 18:17 queuedata.json [2021-08-16 19:03:29] -rwxr-xr-x 1 boinc boinc 6966 Aug 16 18:18 run_atlas* [2021-08-16 19:03:29] -rwx------ 1 boinc boinc 20633 Aug 16 18:17 runpilot2-wrapper.sh* [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 407 Aug 16 18:18 runtime_log [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 5572 Aug 16 18:18 runtime_log.err [2021-08-16 19:03:29] drwxrwx--x 2 boinc boinc 4096 Aug 16 18:18 shared/ [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 16547 Aug 16 18:18 start_atlas.sh [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 2207 Aug 16 18:18 stderr.txt [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 107 Aug 16 18:18 wrapper_26015_x86_64-pc-linux-gnu [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 26 Aug 16 19:02 wrapper_checkpoint.txt [2021-08-16 19:03:29] 2021-08-16 23:03:02,012 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,012 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,012 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,013 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,014 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,014 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,014 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,014 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,014 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,014 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-08-16 19:03:29] 2021-08-16 23:03:02,014 | INFO | pilot.control.job | has_job_completed | job 5154455326 has completed (purged errors) [2021-08-16 19:03:29] 2021-08-16 23:03:02,015 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-08-16 19:03:29] 2021-08-16 23:03:02,017 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/48/PanDA_Pilot-5154455326 [2021-08-16 19:03:29] 2021-08-16 23:03:03,021 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [22568] [2021-08-16 19:03:29] 2021-08-16 23:03:03,021 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 22568 [2021-08-16 19:03:29] 2021-08-16 23:03:03,022 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-08-16 19:03:29] 2021-08-16 23:03:04,024 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-08-16 19:03:29] 2021-08-16 23:03:04,024 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=22568 [2021-08-16 19:03:29] 2021-08-16 23:03:04,154 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [22568] (in reverse order) [2021-08-16 19:03:29] 2021-08-16 23:03:04,335 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-08-16 19:03:29] 2021-08-16 23:03:04,335 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-08-16 19:03:29] 2021-08-16 23:03:04,336 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-08-16 19:03:29] 2021-08-16 23:03:04,336 | INFO | pilot.control.job | retrieve | ready for new job [2021-08-16 19:03:29] 2021-08-16 23:03:04,336 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-08-16 19:03:29] 2021-08-16 23:03:04,337 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-16 19:03:29] 2021-08-16 23:03:04,337 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (13) *** [2021-08-16 19:03:29] 2021-08-16 23:03:04,337 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-16 19:03:29] 2021-08-16 23:03:04,338 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-08-16 19:03:29] 2021-08-16 23:03:04,358 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-08-16 19:03:29] 2021-08-16 23:03:04,889 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-08-16 19:03:29] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-08-16 19:03:29] Distributor ID: CentOS [2021-08-16 19:03:29] Description: CentOS Linux release 7.8.2003 (Core) [2021-08-16 19:03:29] Release: 7.8.2003 [2021-08-16 19:03:29] Codename: Core [2021-08-16 19:03:29] 2021-08-16 23:03:04,889 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-16 19:03:29] 2021-08-16 23:03:05,392 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/48 [2021-08-16 19:03:29] 2021-08-16 23:03:05,425 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (37597741056 B) [2021-08-16 19:03:29] 2021-08-16 23:03:05,426 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-08-16 19:03:29] 2021-08-16 23:03:05,426 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:05,426 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:05,426 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-08-16 19:03:29] 2021-08-16 23:03:05,698 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:05,698 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:05,844 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-08-16 19:03:29] 2021-08-16 23:03:05,844 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:05,844 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:05,905 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:05,905 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:05,914 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-08-16 19:03:29] 2021-08-16 23:03:05,915 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:05,915 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:05,936 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-08-16 19:03:29] 2021-08-16 23:03:05,943 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:05,943 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:06,272 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-08-16 19:03:29] 2021-08-16 23:03:06,326 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:06,326 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:06,567 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-08-16 19:03:29] 2021-08-16 23:03:06,567 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:06,567 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:06,650 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:06,650 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:06,703 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:06,703 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:06,775 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:06,775 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:06,993 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-08-16 19:03:29] 2021-08-16 23:03:06,993 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:06,993 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:07,272 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:07,273 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:08,428 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-08-16 19:03:29] 2021-08-16 23:03:08,428 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:28,846 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 74 s) [2021-08-16 19:03:29] 2021-08-16 23:03:28,846 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-08-16 19:03:29] 2021-08-16 23:03:28,846 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-08-16 19:03:29] 2021-08-16 23:03:28,847 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-08-16 19:03:29] 2021-08-16 23:03:29,472 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-08-16 19:03:29] 2021-08-16 23:03:29,473 | INFO | root | wrap_up | traces error code: 0 [2021-08-16 19:03:29] 2021-08-16 23:03:29,473 | INFO | root | wrap_up | pilot has finished [2021-08-16 19:03:29] 2021-08-16 23:03:29,549 [wrapper] ==== pilot stdout END ==== [2021-08-16 19:03:29] 2021-08-16 23:03:29,554 [wrapper] ==== wrapper stdout RESUME ==== [2021-08-16 19:03:29] 2021-08-16 23:03:29,560 [wrapper] Pilot exit status: 0 [2021-08-16 19:03:29] 2021-08-16 23:03:29,590 [wrapper] pandaids: 5154455326 [2021-08-16 19:03:29] 2021-08-16 23:03:29,602 [wrapper] apfmon messages muted [2021-08-16 19:03:29] 2021-08-16 23:03:29,608 [wrapper] Test setup, not cleaning [2021-08-16 19:03:29] 2021-08-16 23:03:29,615 [wrapper] ==== wrapper stdout END ==== [2021-08-16 19:03:29] 2021-08-16 23:03:29,621 [wrapper] ==== wrapper stderr END ==== [2021-08-16 19:03:29] 2021-08-16 23:03:29,633 [wrapper] wrapperexiting ec=0, duration=2698 [2021-08-16 19:03:29] 2021-08-16 23:03:29,638 [wrapper] apfmon messages muted [2021-08-16 19:03:29] *** Error codes and diagnostics *** [2021-08-16 19:03:29] "exeErrorCode": 0, [2021-08-16 19:03:29] "exeErrorDiag": "", [2021-08-16 19:03:29] "pilotErrorCode": 0, [2021-08-16 19:03:29] "pilotErrorDiag": "", [2021-08-16 19:03:29] *** Listing of results directory *** [2021-08-16 19:03:29] total 45452 [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 340725 Aug 16 17:25 pilot2.tar.gz [2021-08-16 19:03:29] -rwx------ 1 boinc boinc 20633 Aug 16 18:17 runpilot2-wrapper.sh [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 3214 Aug 16 18:17 queuedata.json [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 107 Aug 16 18:18 wrapper_26015_x86_64-pc-linux-gnu [2021-08-16 19:03:29] -rwxr-xr-x 1 boinc boinc 6966 Aug 16 18:18 run_atlas [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 112 Aug 16 18:18 job.xml [2021-08-16 19:03:29] drwxrwx--x 2 boinc boinc 4096 Aug 16 18:18 shared [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 6168 Aug 16 18:18 init_data.xml [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 0 Aug 16 18:18 boinc_lockfile [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 16547 Aug 16 18:18 start_atlas.sh [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 350488 Aug 16 18:18 input.tar.gz [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 37965264 Aug 16 18:18 EVNT.04972714._000027.pool.root.1 [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 2607 Aug 16 18:18 pandaJob.out [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1078724 Aug 16 18:19 agis_schedconf.cvmfs.json [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1943167 Aug 16 18:19 cric_ddmendpoints.json [2021-08-16 19:03:29] drwx------ 4 boinc boinc 4096 Aug 16 18:19 pilot2 [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1808597 Aug 16 19:02 output.1.dff2228d-ad9d-4284-8fe2-d9fdb107bcc5_9283.pool.root [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1017 Aug 16 19:02 memory_monitor_summary.json [2021-08-16 19:03:29] -rw------- 1 boinc boinc 183262 Aug 16 19:02 dff2228d-ad9d-4284-8fe2-d9fdb107bcc5_9283.1.job.log.tgz [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 534 Aug 16 19:02 boinc_task_state.xml [2021-08-16 19:03:29] -rw------- 1 boinc boinc 8709 Aug 16 19:03 heartbeat.json [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 8192 Aug 16 19:03 boinc_mmap_file [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 26 Aug 16 19:03 wrapper_checkpoint.txt [2021-08-16 19:03:29] -rw------- 1 boinc boinc 7367 Aug 16 19:03 pilotlog.txt [2021-08-16 19:03:29] -rw------- 1 boinc boinc 327441 Aug 16 19:03 dff2228d-ad9d-4284-8fe2-d9fdb107bcc5_9283.1.job.log [2021-08-16 19:03:29] -rw------- 1 boinc boinc 532 Aug 16 19:03 output.list [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 744 Aug 16 19:03 runtime_log [2021-08-16 19:03:29] -rw------- 1 boinc boinc 2344960 Aug 16 19:03 result.tar.gz [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 9395 Aug 16 19:03 runtime_log.err [2021-08-16 19:03:29] -rw------- 1 boinc boinc 562 Aug 16 19:03 ELqLDmN6zZzn7Olcko1bjSoqABFKDmABFKDmumdXDmwqGKDmRaLlim.diag [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 29550 Aug 16 19:03 stderr.txt [2021-08-16 19:03:29] HITS file was successfully produced: [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1808597 Aug 16 19:02 shared/HITS.pool.root.1 [2021-08-16 19:03:29] *** Contents of shared directory: *** [2021-08-16 19:03:29] total 41500 [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 16547 Aug 16 18:18 start_atlas.sh [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 350488 Aug 16 18:18 input.tar.gz [2021-08-16 19:03:29] -rw-r--r-- 1 boinc boinc 37965264 Aug 16 18:18 ATLAS.root_0 [2021-08-16 19:03:29] -rw------- 1 boinc boinc 1808597 Aug 16 19:02 HITS.pool.root.1 [2021-08-16 19:03:29] -rw------- 1 boinc boinc 2344960 Aug 16 19:03 result.tar.gz 19:03:31 (13155): run_atlas exited; CPU time 1142.120407 19:03:31 (13155): called boinc_finish(0) </stderr_txt> ]]>
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