Name | 203LDmhu1Zzn7Olcko1bjSoqABFKDmABFKDmumdXDm9qGKDmUJpZgn_0 |
Workunit | 2119624 |
Created | 17 Aug 2021, 0:13:39 UTC |
Sent | 17 Aug 2021, 0:16:32 UTC |
Report deadline | 24 Aug 2021, 0:16:32 UTC |
Received | 17 Aug 2021, 1:01:13 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 39 min 26 sec |
CPU time | 18 min 34 sec |
Validate state | Valid |
Credit | 10.45 |
Device peak FLOPS | 3.04 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.43 GB |
Peak swap size | 33.99 GB |
Peak disk usage | 80.47 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 20:16:54 (82666): wrapper (7.7.26015): starting 20:16:54 (82666): wrapper: running run_atlas (--nthreads 1) [2021-08-16 20:16:54] Arguments: --nthreads 1 [2021-08-16 20:16:54] Threads: 1 [2021-08-16 20:16:54] Checking for CVMFS [2021-08-16 20:16:54] Probing /cvmfs/atlas.cern.ch... OK [2021-08-16 20:16:54] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-08-16 20:16:54] Running cvmfs_config stat atlas.cern.ch [2021-08-16 20:16:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-08-16 20:16:55] 2.9.0.0 57941 174 49260 90396 2 11 3232859 4194304 737 130560 0 584259 99.994 8635 1407 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-08-16 20:16:55] CVMFS is ok [2021-08-16 20:16:55] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-08-16 20:16:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-08-16 20:16:55] Small home clusters do not require a local http proxy but it is suggested if [2021-08-16 20:16:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-08-16 20:16:55] Further information can be found at the LHC@home message board. [2021-08-16 20:16:55] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-08-16 20:16:55] Checking for singularity binary... [2021-08-16 20:16:55] Using singularity found in PATH at /usr/local/bin/singularity [2021-08-16 20:16:55] Running /usr/local/bin/singularity --version [2021-08-16 20:16:55] singularity version 3.7.2+10-ga969f0f8c [2021-08-16 20:16:55] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-08-16 20:16:55] E5-2670 [2021-08-16 20:16:55] Singularity works [2021-08-16 20:16:55] Starting ATLAS job with PandaID=5154648183 [2021-08-16 20:16:55] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/5 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-08-16 20:56:18] *** The last 200 lines of the pilot log: *** [2021-08-16 20:56:18] "cpuPWEfficiency": 0.4954, [2021-08-16 20:56:18] "cpuTime": 6, [2021-08-16 20:56:18] "cpuTimeTotal": 1093, [2021-08-16 20:56:18] "externalCpuTime": 13, [2021-08-16 20:56:18] "processedEvents": 2, [2021-08-16 20:56:18] "trfPredata": null, [2021-08-16 20:56:18] "wallTime": 2192 [2021-08-16 20:56:18] } [2021-08-16 20:56:18] } [2021-08-16 20:56:18] } [2021-08-16 20:56:18] 2021-08-17 00:55:15,117 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-08-16 20:56:18] 2021-08-17 00:55:15,118 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-08-16 20:56:18] 2021-08-17 00:55:15,118 | INFO | pilot.control.job | send_state | job 5154648183 has finished - writing final server update [2021-08-16 20:56:18] 2021-08-17 00:55:15,118 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2021-08-16 20:56:18] 2021-08-17 00:55:15,118 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36943071 B to job metrics [2021-08-16 20:56:18] 2021-08-17 00:55:15,119 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-08-16 20:56:18] 2021-08-17 00:55:15,119 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-08-16 20:56:18] 2021-08-17 00:55:15,120 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 502.94 B/s (using 30 data points, chi2=397442) [2021-08-16 20:56:18] 2021-08-17 00:55:15,121 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=5 nEvents=2 dbTime=182.2 dbData=4274626 leak=502.94 chi2=397442 eventnu [2021-08-16 20:56:18] 2021-08-17 00:55:15,121 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.366667 [2021-08-16 20:56:18] 2021-08-17 00:55:15,121 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-08-16 20:56:18] 2021-08-17 00:55:15,142 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-08-16 20:56:18] 2021-08-17 00:55:15,195 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-5154648183/memory_monitor_summary.json (trf na [2021-08-16 20:56:18] 2021-08-17 00:55:15,197 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.108, 'nthreads': 6.054, 'pss': 1081652.0, 'rchar': 289024.0, [2021-08-16 20:56:18] 2021-08-17 00:55:15,197 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-08-16 20:56:18] 2021-08-17 00:55:15,197 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-08-16 20:56:18] 2021-08-17 00:55:15,197 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-16 20:56:18] 2021-08-17 00:55:15,197 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-08-16 20:56:18] 2021-08-17 00:55:15,197 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-08-16 20:56:18] 2021-08-17 00:55:15,198 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-08-16 20:56:18] 2021-08-17 00:55:15,198 | INFO | pilot.util.timing | timing_report | . payload setup = 21 s [2021-08-16 20:56:18] 2021-08-17 00:55:15,198 | INFO | pilot.util.timing | timing_report | . total setup = 22 s [2021-08-16 20:56:18] 2021-08-17 00:55:15,198 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-08-16 20:56:18] 2021-08-17 00:55:15,198 | INFO | pilot.util.timing | timing_report | . payload execution = 2233 s [2021-08-16 20:56:18] 2021-08-17 00:55:15,198 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2021-08-16 20:56:18] 2021-08-17 00:55:15,198 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-16 20:56:18] 2021-08-17 00:55:15,198 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-08-16 20:56:18] 2021-08-17 00:55:15,199 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5154648183', 'state': 'finished', 'timestamp': '2021-08-16T20:55:15 [2021-08-16 20:56:18] 2021-08-17 00:55:15,200 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/5/heartbeat.json [2021-08-16 20:56:18] 2021-08-17 00:55:15,200 | DEBUG | pilot.control.job | queue_monitor | job 5154648183 was dequeued from the monitored payloads queue [2021-08-16 20:56:18] 2021-08-17 00:55:15,357 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,360 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-08-16 20:56:18] 2021-08-17 00:55:15,360 | INFO | pilot.control.job | make_job_report | [2021-08-16 20:56:18] 2021-08-17 00:55:15,360 | INFO | pilot.control.job | make_job_report | job summary report [2021-08-16 20:56:18] 2021-08-17 00:55:15,361 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-16 20:56:18] 2021-08-17 00:55:15,361 | INFO | pilot.control.job | make_job_report | PanDA job id: 5154648183 [2021-08-16 20:56:18] 2021-08-17 00:55:15,361 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-08-16 20:56:18] 2021-08-17 00:55:15,361 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-08-16 20:56:18] 2021-08-17 00:55:15,361 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-08-16 20:56:18] 2021-08-17 00:55:15,361 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-08-16 20:56:18] 2021-08-17 00:55:15,361 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1153 s [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | pid: 91292 [2021-08-16 20:56:18] 2021-08-17 00:55:15,362 | INFO | pilot.control.job | make_job_report | pgrp: 91292 [2021-08-16 20:56:18] 2021-08-17 00:55:15,363 | INFO | pilot.control.job | make_job_report | corecount: 1 [2021-08-16 20:56:18] 2021-08-17 00:55:15,363 | INFO | pilot.control.job | make_job_report | event service: False [2021-08-16 20:56:18] 2021-08-17 00:55:15,363 | INFO | pilot.control.job | make_job_report | sizes: {26892538: 3875054, 26892539: 3876387, 26892540: 3876495, 26892551: 3876495, 26894806: 390078 [2021-08-16 20:56:18] 2021-08-17 00:55:15,363 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-16 20:56:18] 2021-08-17 00:55:15,363 | INFO | pilot.control.job | make_job_report | [2021-08-16 20:56:18] 2021-08-17 00:55:15,363 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/5: [2021-08-16 20:56:18] [2021-08-16 20:56:18] 2021-08-17 00:55:15,363 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/5 [2021-08-16 20:56:18] 2021-08-17 00:55:15,397 | DEBUG | pilot.control.job | has_job_completed | total 43380 [2021-08-16 20:56:18] -rw------- 1 boinc boinc 130 Aug 16 20:16 203LDmhu1Zzn7Olcko1bjSoqABFKDmABFKDmumdXDm9qGKDmUJpZgn.diag [2021-08-16 20:56:18] -rw------- 1 boinc boinc 284850 Aug 16 20:55 4332b068-3bc5-4a4a-ad6b-74c70baf1537_27205.1.job.log [2021-08-16 20:56:18] -rw------- 1 boinc boinc 215324 Aug 16 20:55 4332b068-3bc5-4a4a-ad6b-74c70baf1537_27205.1.job.log.tgz [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1078732 Aug 16 20:17 agis_schedconf.cvmfs.json [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 0 Aug 16 20:16 boinc_lockfile [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 8192 Aug 16 20:55 boinc_mmap_file [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 535 Aug 16 20:54 boinc_task_state.xml [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1943167 Aug 16 20:17 cric_ddmendpoints.json [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 37965264 Aug 16 20:16 EVNT.04972714._000027.pool.root.1 [2021-08-16 20:56:18] -rw------- 1 boinc boinc 8714 Aug 16 20:55 heartbeat.json [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 6167 Aug 16 20:16 init_data.xml [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 350487 Aug 16 20:16 input.tar.gz [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 112 Aug 16 20:16 job.xml [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1017 Aug 16 20:54 memory_monitor_summary.json [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1808598 Aug 16 20:54 output.1.4332b068-3bc5-4a4a-ad6b-74c70baf1537_27205.pool.root [2021-08-16 20:56:18] -rw------- 1 boinc boinc 536 Aug 16 20:55 output.list [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 2612 Aug 16 20:16 pandaJob.out [2021-08-16 20:56:18] drwxrwx--- 2 boinc boinc 4096 Aug 16 20:55 PanDA_Pilot-5154648183/ [2021-08-16 20:56:18] drwx------ 4 boinc boinc 4096 Aug 16 20:17 pilot2/ [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 340725 Aug 16 19:27 pilot2.tar.gz [2021-08-16 20:56:18] -rw------- 1 boinc boinc 265891 Aug 16 20:55 pilotlog.txt [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 3214 Aug 16 20:13 queuedata.json [2021-08-16 20:56:18] -rwxr-xr-x 1 boinc boinc 6966 Aug 16 20:16 run_atlas* [2021-08-16 20:56:18] -rwx------ 1 boinc boinc 20633 Aug 16 20:13 runpilot2-wrapper.sh* [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 407 Aug 16 20:16 runtime_log [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 5560 Aug 16 20:16 runtime_log.err [2021-08-16 20:56:18] drwxrwx--x 2 boinc boinc 4096 Aug 16 20:16 shared/ [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 16551 Aug 16 20:16 start_atlas.sh [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 2207 Aug 16 20:16 stderr.txt [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 107 Aug 16 20:16 wrapper_26015_x86_64-pc-linux-gnu [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 26 Aug 16 20:55 wrapper_checkpoint.txt [2021-08-16 20:56:18] 2021-08-17 00:55:15,397 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,398 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,399 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,399 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,399 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,399 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,399 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,399 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,399 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,399 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-08-16 20:56:18] 2021-08-17 00:55:15,400 | INFO | pilot.control.job | has_job_completed | job 5154648183 has completed (purged errors) [2021-08-16 20:56:18] 2021-08-17 00:55:15,400 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-08-16 20:56:18] 2021-08-17 00:55:15,403 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/5/PanDA_Pilot-5154648183 [2021-08-16 20:56:18] 2021-08-17 00:55:16,408 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [91292] [2021-08-16 20:56:18] 2021-08-17 00:55:16,408 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 91292 [2021-08-16 20:56:18] 2021-08-17 00:55:16,408 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-08-16 20:56:18] 2021-08-17 00:55:17,414 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-08-16 20:56:18] 2021-08-17 00:55:17,414 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=91292 [2021-08-16 20:56:18] 2021-08-17 00:55:17,535 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [91292] (in reverse order) [2021-08-16 20:56:18] 2021-08-17 00:55:17,635 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-08-16 20:56:18] 2021-08-17 00:55:17,635 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-08-16 20:56:18] 2021-08-17 00:55:17,635 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-08-16 20:56:18] 2021-08-17 00:55:17,635 | INFO | pilot.control.job | retrieve | ready for new job [2021-08-16 20:56:18] 2021-08-17 00:55:17,636 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-08-16 20:56:18] 2021-08-17 00:55:17,637 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-16 20:56:18] 2021-08-17 00:55:17,637 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (13) *** [2021-08-16 20:56:18] 2021-08-17 00:55:17,637 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-16 20:56:18] 2021-08-17 00:55:17,637 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-08-16 20:56:18] 2021-08-17 00:55:17,657 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-08-16 20:56:18] 2021-08-17 00:55:17,794 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-08-16 20:56:18] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-08-16 20:56:18] Distributor ID: CentOS [2021-08-16 20:56:18] Description: CentOS Linux release 7.8.2003 (Core) [2021-08-16 20:56:18] Release: 7.8.2003 [2021-08-16 20:56:18] Codename: Core [2021-08-16 20:56:18] 2021-08-17 00:55:17,794 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-16 20:56:18] 2021-08-17 00:55:18,296 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/5 [2021-08-16 20:56:18] 2021-08-17 00:55:18,317 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (38995492864 B) [2021-08-16 20:56:18] 2021-08-17 00:55:18,317 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-08-16 20:56:18] 2021-08-17 00:55:18,317 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:18,317 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-08-16 20:56:18] 2021-08-17 00:55:18,318 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:18,318 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-08-16 20:56:18] 2021-08-17 00:55:18,467 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:18,467 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:18,609 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:18,609 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:18,832 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-08-16 20:56:18] 2021-08-17 00:55:18,832 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:18,833 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:18,917 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:18,917 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:19,003 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-08-16 20:56:18] 2021-08-17 00:55:19,004 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:19,004 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:19,008 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:19,008 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:19,124 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-08-16 20:56:18] 2021-08-17 00:55:19,148 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-08-16 20:56:18] 2021-08-17 00:55:19,148 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:19,149 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:19,371 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:19,371 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:19,463 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:19,463 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:19,549 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:19,549 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:19,772 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-08-16 20:56:18] 2021-08-17 00:55:20,125 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:20,125 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:20,370 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-08-16 20:56:18] 2021-08-17 00:55:20,370 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:20,370 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-08-16 20:56:18] 2021-08-17 00:55:22,773 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-08-16 20:56:18] 2021-08-17 00:55:22,773 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-08-16 20:56:18] 2021-08-17 00:56:16,960 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 134 s) [2021-08-16 20:56:18] 2021-08-17 00:56:16,961 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-08-16 20:56:18] 2021-08-17 00:56:16,961 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-08-16 20:56:18] 2021-08-17 00:56:16,961 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-08-16 20:56:18] 2021-08-17 00:56:17,952 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-08-16 20:56:18] 2021-08-17 00:56:17,953 | INFO | root | wrap_up | traces error code: 0 [2021-08-16 20:56:18] 2021-08-17 00:56:17,953 | INFO | root | wrap_up | pilot has finished [2021-08-16 20:56:18] 2021-08-17 00:56:18,022 [wrapper] ==== pilot stdout END ==== [2021-08-16 20:56:18] 2021-08-17 00:56:18,037 [wrapper] ==== wrapper stdout RESUME ==== [2021-08-16 20:56:18] 2021-08-17 00:56:18,048 [wrapper] Pilot exit status: 0 [2021-08-16 20:56:18] 2021-08-17 00:56:18,105 [wrapper] pandaids: 5154648183 [2021-08-16 20:56:18] 2021-08-17 00:56:18,144 [wrapper] apfmon messages muted [2021-08-16 20:56:18] 2021-08-17 00:56:18,160 [wrapper] Test setup, not cleaning [2021-08-16 20:56:18] 2021-08-17 00:56:18,173 [wrapper] ==== wrapper stdout END ==== [2021-08-16 20:56:18] 2021-08-17 00:56:18,189 [wrapper] ==== wrapper stderr END ==== [2021-08-16 20:56:18] 2021-08-17 00:56:18,224 [wrapper] wrapperexiting ec=0, duration=2362 [2021-08-16 20:56:18] 2021-08-17 00:56:18,239 [wrapper] apfmon messages muted [2021-08-16 20:56:18] *** Error codes and diagnostics *** [2021-08-16 20:56:18] "exeErrorCode": 0, [2021-08-16 20:56:18] "exeErrorDiag": "", [2021-08-16 20:56:18] "pilotErrorCode": 0, [2021-08-16 20:56:18] "pilotErrorDiag": "", [2021-08-16 20:56:18] *** Listing of results directory *** [2021-08-16 20:56:18] total 45460 [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 340725 Aug 16 19:27 pilot2.tar.gz [2021-08-16 20:56:18] -rwx------ 1 boinc boinc 20633 Aug 16 20:13 runpilot2-wrapper.sh [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 3214 Aug 16 20:13 queuedata.json [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 107 Aug 16 20:16 wrapper_26015_x86_64-pc-linux-gnu [2021-08-16 20:56:18] -rwxr-xr-x 1 boinc boinc 6966 Aug 16 20:16 run_atlas [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 112 Aug 16 20:16 job.xml [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 6167 Aug 16 20:16 init_data.xml [2021-08-16 20:56:18] drwxrwx--x 2 boinc boinc 4096 Aug 16 20:16 shared [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 0 Aug 16 20:16 boinc_lockfile [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 37965264 Aug 16 20:16 EVNT.04972714._000027.pool.root.1 [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 16551 Aug 16 20:16 start_atlas.sh [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 350487 Aug 16 20:16 input.tar.gz [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 2612 Aug 16 20:16 pandaJob.out [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1078732 Aug 16 20:17 agis_schedconf.cvmfs.json [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1943167 Aug 16 20:17 cric_ddmendpoints.json [2021-08-16 20:56:18] drwx------ 4 boinc boinc 4096 Aug 16 20:17 pilot2 [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1808598 Aug 16 20:54 output.1.4332b068-3bc5-4a4a-ad6b-74c70baf1537_27205.pool.root [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 535 Aug 16 20:54 boinc_task_state.xml [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1017 Aug 16 20:54 memory_monitor_summary.json [2021-08-16 20:56:18] -rw------- 1 boinc boinc 215324 Aug 16 20:55 4332b068-3bc5-4a4a-ad6b-74c70baf1537_27205.1.job.log.tgz [2021-08-16 20:56:18] -rw------- 1 boinc boinc 8714 Aug 16 20:55 heartbeat.json [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 26 Aug 16 20:56 wrapper_checkpoint.txt [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 8192 Aug 16 20:56 boinc_mmap_file [2021-08-16 20:56:18] -rw------- 1 boinc boinc 7522 Aug 16 20:56 pilotlog.txt [2021-08-16 20:56:18] -rw------- 1 boinc boinc 299679 Aug 16 20:56 4332b068-3bc5-4a4a-ad6b-74c70baf1537_27205.1.job.log [2021-08-16 20:56:18] -rw------- 1 boinc boinc 536 Aug 16 20:56 output.list [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 748 Aug 16 20:56 runtime_log [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 9414 Aug 16 20:56 runtime_log.err [2021-08-16 20:56:18] -rw------- 1 boinc boinc 2344960 Aug 16 20:56 result.tar.gz [2021-08-16 20:56:18] -rw------- 1 boinc boinc 562 Aug 16 20:56 203LDmhu1Zzn7Olcko1bjSoqABFKDmABFKDmumdXDm9qGKDmUJpZgn.diag [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 29812 Aug 16 20:56 stderr.txt [2021-08-16 20:56:18] HITS file was successfully produced: [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1808598 Aug 16 20:54 shared/HITS.pool.root.1 [2021-08-16 20:56:18] *** Contents of shared directory: *** [2021-08-16 20:56:18] total 41500 [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 350487 Aug 16 20:16 input.tar.gz [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 37965264 Aug 16 20:16 ATLAS.root_0 [2021-08-16 20:56:18] -rw-r--r-- 1 boinc boinc 16551 Aug 16 20:16 start_atlas.sh [2021-08-16 20:56:18] -rw------- 1 boinc boinc 1808598 Aug 16 20:54 HITS.pool.root.1 [2021-08-16 20:56:18] -rw------- 1 boinc boinc 2344960 Aug 16 20:56 result.tar.gz 20:56:19 (82666): run_atlas exited; CPU time 1114.802589 20:56:19 (82666): called boinc_finish(0) </stderr_txt> ]]>
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