Name | CB3LDmMq5bzn7Olcko1bjSoqABFKDmABFKDmumdXDmRwGKDmAO8VMo_0 |
Workunit | 2121499 |
Created | 22 Aug 2021, 16:49:43 UTC |
Sent | 22 Aug 2021, 16:49:55 UTC |
Report deadline | 29 Aug 2021, 16:49:55 UTC |
Received | 22 Aug 2021, 16:58:44 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4459 |
Run time | 8 min 27 sec |
CPU time | 2 min 57 sec |
Validate state | Valid |
Credit | 55.02 |
Device peak FLOPS | 46.81 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.61 GB |
Peak swap size | 3.11 GB |
Peak disk usage | 78.31 MB |
<core_client_version>7.16.6</core_client_version> <![CDATA[ <stderr_txt> 12:50:05 (2289489): wrapper (7.7.26015): starting 12:50:05 (2289489): wrapper: running run_atlas (--nthreads 8) [2021-08-22 12:50:05] Arguments: --nthreads 8 [2021-08-22 12:50:05] Threads: 8 [2021-08-22 12:50:05] Checking for CVMFS [2021-08-22 12:50:06] Probing /cvmfs/atlas.cern.ch... OK [2021-08-22 12:50:06] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-08-22 12:50:06] Running cvmfs_config stat atlas.cern.ch [2021-08-22 12:50:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-08-22 12:50:06] 2.9.0.0 2289647 0 24496 90738 4 1 4557632 6144000 0 130560 0 0 0.000 527 2019 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.100:3128 1 [2021-08-22 12:50:06] CVMFS is ok [2021-08-22 12:50:06] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-08-22 12:50:06] Checking for singularity binary... [2021-08-22 12:50:06] Using singularity found in PATH at /usr/local/bin/singularity [2021-08-22 12:50:06] Running /usr/local/bin/singularity --version [2021-08-22 12:50:06] singularity version 3.8.1 [2021-08-22 12:50:06] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-08-22 12:50:06] WARNING: While bind mounting '/cvmfs:/cvmfs': destination is already in the mount point list GORGOROTH [2021-08-22 12:50:06] Singularity works [2021-08-22 12:50:06] Set ATHENA_PROC_NUMBER=8 [2021-08-22 12:50:06] Starting ATLAS job with PandaID=5162379950 [2021-08-22 12:50:06] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/17 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-08-22 12:58:30] *** The last 200 lines of the pilot log: *** [2021-08-22 12:58:30] "processedEvents": 2, [2021-08-22 12:58:30] "reportGeneration": { [2021-08-22 12:58:30] "cpuTime": 0.12, [2021-08-22 12:58:30] "wallTime": 3.3 [2021-08-22 12:58:30] }, [2021-08-22 12:58:30] "transformSetup": { [2021-08-22 12:58:30] "cpuTime": 0.0, [2021-08-22 12:58:30] "wallTime": 0.01 [2021-08-22 12:58:30] }, [2021-08-22 12:58:30] "trfPredata": null, [2021-08-22 12:58:30] "wallTime": 369.33 [2021-08-22 12:58:30] } [2021-08-22 12:58:30] } [2021-08-22 12:58:30] } [2021-08-22 12:58:30] 2021-08-22 16:57:51,268 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-08-22 12:58:30] 2021-08-22 16:57:51,268 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-08-22 12:58:30] 2021-08-22 16:57:51,268 | INFO | pilot.control.job | send_state | job 5162379950 has finished - writing final server update [2021-08-22 12:58:30] 2021-08-22 16:57:51,268 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 8 [2021-08-22 12:58:30] 2021-08-22 16:57:51,268 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -36634209 B to job metrics [2021-08-22 12:58:30] 2021-08-22 16:57:51,268 | WARNING | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[], y=[] (must be same and length>=4) [2021-08-22 12:58:30] 2021-08-22 16:57:51,269 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="nEvents=2 dbTime=35.94 dbData=4274899 eventnumber=17002" [2021-08-22 12:58:30] 2021-08-22 16:57:51,269 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 3.666667 [2021-08-22 12:58:30] 2021-08-22 16:57:51,269 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-08-22 12:58:30] 2021-08-22 16:57:51,289 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-08-22 12:58:30] 2021-08-22 16:57:51,345 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/17/PanDA_Pilot-5162379950/memory_monitor_summary.json (trf n [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'HW': {'cpu': {'CPUs': 32, 'CoresPerSocket': 16, 'ModelName': 'AMD Ryzen Threadr [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.control.job | add_memory_info | memory information not available: 'Max' [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | . initial setup = 0 s [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | . payload setup = 11 s [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | . total setup = 11 s [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | . payload execution = 422 s [2021-08-22 12:58:30] 2021-08-22 16:57:51,346 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2021-08-22 12:58:30] 2021-08-22 16:57:51,347 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-22 12:58:30] 2021-08-22 16:57:51,347 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-08-22 12:58:30] 2021-08-22 16:57:51,347 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5162379950', 'state': 'finished', 'timestamp': '2021-08-22T12:57:51 [2021-08-22 12:58:30] 2021-08-22 16:57:51,347 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/17/heartbeat.json [2021-08-22 12:58:30] 2021-08-22 16:57:51,348 | DEBUG | pilot.control.job | queue_monitor | job 5162379950 was dequeued from the monitored payloads queue [2021-08-22 12:58:30] 2021-08-22 16:57:51,434 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-08-22 12:58:30] 2021-08-22 16:57:51,434 | INFO | pilot.control.job | make_job_report | [2021-08-22 12:58:30] 2021-08-22 16:57:51,434 | INFO | pilot.control.job | make_job_report | job summary report [2021-08-22 12:58:30] 2021-08-22 16:57:51,434 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-22 12:58:30] 2021-08-22 16:57:51,434 | INFO | pilot.control.job | make_job_report | PanDA job id: 5162379950 [2021-08-22 12:58:30] 2021-08-22 16:57:51,434 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-08-22 12:58:30] 2021-08-22 16:57:51,434 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 190 s [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | pid: 2297827 [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | pgrp: 2297827 [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | corecount: 8 [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | event service: False [2021-08-22 12:58:30] 2021-08-22 16:57:51,435 | INFO | pilot.control.job | make_job_report | sizes: {17340125: 3889425, 17340136: 3889311, 17340570: 3911546, 17340571: 3921016, 17340572: 392129 [2021-08-22 12:58:30] 2021-08-22 16:57:51,436 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-22 12:58:30] 2021-08-22 16:57:51,436 | INFO | pilot.control.job | make_job_report | [2021-08-22 12:58:30] 2021-08-22 16:57:51,436 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/17: [2021-08-22 12:58:30] [2021-08-22 12:58:30] 2021-08-22 16:57:51,436 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/17 [2021-08-22 12:58:30] 2021-08-22 16:57:51,458 | DEBUG | pilot.control.job | has_job_completed | total 42900 [2021-08-22 12:58:30] -rw------- 1 boinc boinc 139758 Aug 22 12:57 360ddb4b-a252-45ed-810e-45e074d18f2f_33294.1.job.log [2021-08-22 12:58:30] -rw------- 1 boinc boinc 171646 Aug 22 12:57 360ddb4b-a252-45ed-810e-45e074d18f2f_33294.1.job.log.tgz [2021-08-22 12:58:30] -rw------- 1 boinc boinc 1079093 Aug 22 12:50 agis_schedconf.cvmfs.json [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 0 Aug 22 12:50 boinc_lockfile [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 8192 Aug 22 12:57 boinc_mmap_file [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 532 Aug 22 12:57 boinc_task_state.xml [2021-08-22 12:58:30] -rw------- 1 boinc boinc 132 Aug 22 12:50 CB3LDmMq5bzn7Olcko1bjSoqABFKDmABFKDmumdXDmRwGKDmAO8VMo.diag [2021-08-22 12:58:30] -rw------- 1 boinc boinc 1949854 Aug 22 12:50 cric_ddmendpoints.json [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 37620382 Aug 22 12:50 EVNT.04972714._000038.pool.root.1 [2021-08-22 12:58:30] -rw------- 1 boinc boinc 6599 Aug 22 12:57 heartbeat.json [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 9079 Aug 22 12:50 init_data.xml [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 350477 Aug 22 12:50 input.tar.gz [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 112 Aug 22 12:50 job.xml [2021-08-22 12:58:30] -rw------- 1 boinc boinc 286 Aug 22 12:57 memory_monitor_summary.json [2021-08-22 12:58:30] -rw------- 1 boinc boinc 1975235 Aug 22 12:57 output.1.360ddb4b-a252-45ed-810e-45e074d18f2f_33294.pool.root [2021-08-22 12:58:30] -rw------- 1 boinc boinc 536 Aug 22 12:57 output.list [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 2609 Aug 22 12:50 pandaJob.out [2021-08-22 12:58:30] drwxrwx--- 2 boinc boinc 4096 Aug 22 12:57 PanDA_Pilot-5162379950/ [2021-08-22 12:58:30] drwx------ 4 boinc boinc 4096 Aug 22 12:50 pilot2/ [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 340725 Aug 22 12:29 pilot2.tar.gz [2021-08-22 12:58:30] -rw------- 1 boinc boinc 120584 Aug 22 12:57 pilotlog.txt [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 3214 Aug 22 12:49 queuedata.json [2021-08-22 12:58:30] -rwxr-xr-x 1 boinc boinc 6966 Aug 22 12:50 run_atlas* [2021-08-22 12:58:30] -rwx------ 1 boinc boinc 20633 Aug 22 12:49 runpilot2-wrapper.sh* [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 407 Aug 22 12:50 runtime_log [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 6959 Aug 22 12:50 runtime_log.err [2021-08-22 12:58:30] -rw------- 1 boinc boinc 463 Aug 22 12:50 setup.sh.local [2021-08-22 12:58:30] drwxrwx--x 2 boinc boinc 4096 Aug 22 12:50 shared/ [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 16551 Aug 22 12:50 start_atlas.sh [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 1836 Aug 22 12:50 stderr.txt [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 107 Aug 22 12:50 wrapper_26015_x86_64-pc-linux-gnu [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 24 Aug 22 12:57 wrapper_checkpoint.txt [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,459 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,460 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,460 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,460 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-08-22 12:58:30] 2021-08-22 16:57:51,460 | INFO | pilot.control.job | has_job_completed | job 5162379950 has completed (purged errors) [2021-08-22 12:58:30] 2021-08-22 16:57:51,460 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-08-22 12:58:30] 2021-08-22 16:57:51,462 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/17/PanDA_Pilot-5162379950 [2021-08-22 12:58:30] 2021-08-22 16:57:52,467 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [2297827] [2021-08-22 12:58:30] 2021-08-22 16:57:52,467 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 2297827 [2021-08-22 12:58:30] 2021-08-22 16:57:52,467 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-08-22 12:58:30] 2021-08-22 16:57:53,472 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-08-22 12:58:30] 2021-08-22 16:57:53,472 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=2297827 [2021-08-22 12:58:30] 2021-08-22 16:57:53,544 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [2297827] (in reverse order) [2021-08-22 12:58:30] 2021-08-22 16:57:53,601 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-08-22 12:58:30] 2021-08-22 16:57:53,601 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-08-22 12:58:30] 2021-08-22 16:57:53,601 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-08-22 12:58:30] 2021-08-22 16:57:53,602 | INFO | pilot.control.job | retrieve | ready for new job [2021-08-22 12:58:30] 2021-08-22 16:57:53,602 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-08-22 12:58:30] 2021-08-22 16:57:53,602 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-22 12:58:30] 2021-08-22 16:57:53,602 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.3 (13) *** [2021-08-22 12:58:30] 2021-08-22 16:57:53,602 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-22 12:58:30] 2021-08-22 16:57:53,602 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-08-22 12:58:30] 2021-08-22 16:57:53,622 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-08-22 12:58:30] 2021-08-22 16:57:53,715 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-08-22 12:58:30] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-08-22 12:58:30] Distributor ID: CentOS [2021-08-22 12:58:30] Description: CentOS Linux release 7.8.2003 (Core) [2021-08-22 12:58:30] Release: 7.8.2003 [2021-08-22 12:58:30] Codename: Core [2021-08-22 12:58:30] 2021-08-22 16:57:53,715 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-22 12:58:30] 2021-08-22 16:57:54,216 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/17 [2021-08-22 12:58:30] 2021-08-22 16:57:54,235 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (132675272704 B) [2021-08-22 12:58:30] 2021-08-22 16:57:54,235 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-08-22 12:58:30] 2021-08-22 16:57:54,235 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,235 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-08-22 12:58:30] 2021-08-22 16:57:54,235 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,252 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-08-22 12:58:30] 2021-08-22 16:57:54,252 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,252 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,344 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,344 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,432 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-08-22 12:58:30] 2021-08-22 16:57:54,432 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,432 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,588 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-08-22 12:58:30] 2021-08-22 16:57:54,588 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,588 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,622 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,622 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,716 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,716 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,724 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,724 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,829 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:54,829 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:54,952 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-08-22 12:58:30] 2021-08-22 16:57:55,131 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:55,131 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:55,236 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:55,236 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:55,460 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:55,460 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:56,440 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-08-22 12:58:30] 2021-08-22 16:57:56,440 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:57:56,440 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-08-22 12:58:30] 2021-08-22 16:57:57,271 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-08-22 12:58:30] 2021-08-22 16:58:00,272 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-08-22 12:58:30] 2021-08-22 16:58:00,272 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-08-22 12:58:30] 2021-08-22 16:58:29,680 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) [2021-08-22 12:58:30] 2021-08-22 16:58:29,681 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-08-22 12:58:30] 2021-08-22 16:58:29,681 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-08-22 12:58:30] 2021-08-22 16:58:29,681 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-08-22 12:58:30] 2021-08-22 16:58:30,245 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-08-22 12:58:30] 2021-08-22 16:58:30,245 | INFO | root | wrap_up | traces error code: 0 [2021-08-22 12:58:30] 2021-08-22 16:58:30,246 | INFO | root | wrap_up | pilot has finished [2021-08-22 12:58:30] 2021-08-22 16:58:30,296 [wrapper] ==== pilot stdout END ==== [2021-08-22 12:58:30] 2021-08-22 16:58:30,301 [wrapper] ==== wrapper stdout RESUME ==== [2021-08-22 12:58:30] 2021-08-22 16:58:30,306 [wrapper] Pilot exit status: 0 [2021-08-22 12:58:30] 2021-08-22 16:58:30,328 [wrapper] pandaids: 5162379950 [2021-08-22 12:58:30] 2021-08-22 16:58:30,340 [wrapper] apfmon messages muted [2021-08-22 12:58:30] 2021-08-22 16:58:30,345 [wrapper] Test setup, not cleaning [2021-08-22 12:58:30] 2021-08-22 16:58:30,353 [wrapper] ==== wrapper stdout END ==== [2021-08-22 12:58:30] 2021-08-22 16:58:30,359 [wrapper] ==== wrapper stderr END ==== [2021-08-22 12:58:30] 2021-08-22 16:58:30,369 [wrapper] wrapperexiting ec=0, duration=503 [2021-08-22 12:58:30] 2021-08-22 16:58:30,373 [wrapper] apfmon messages muted [2021-08-22 12:58:30] *** Error codes and diagnostics *** [2021-08-22 12:58:30] "exeErrorCode": 0, [2021-08-22 12:58:30] "exeErrorDiag": "", [2021-08-22 12:58:30] "pilotErrorCode": 0, [2021-08-22 12:58:30] "pilotErrorDiag": "", [2021-08-22 12:58:30] *** Listing of results directory *** [2021-08-22 12:58:30] total 45096 [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 340725 Aug 22 12:29 pilot2.tar.gz [2021-08-22 12:58:30] -rwx------ 1 boinc boinc 20633 Aug 22 12:49 runpilot2-wrapper.sh [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 3214 Aug 22 12:49 queuedata.json [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 107 Aug 22 12:50 wrapper_26015_x86_64-pc-linux-gnu [2021-08-22 12:58:30] -rwxr-xr-x 1 boinc boinc 6966 Aug 22 12:50 run_atlas [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 112 Aug 22 12:50 job.xml [2021-08-22 12:58:30] drwxrwx--x 2 boinc boinc 4096 Aug 22 12:50 shared [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 9079 Aug 22 12:50 init_data.xml [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 0 Aug 22 12:50 boinc_lockfile [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 16551 Aug 22 12:50 start_atlas.sh [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 350477 Aug 22 12:50 input.tar.gz [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 37620382 Aug 22 12:50 EVNT.04972714._000038.pool.root.1 [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 2609 Aug 22 12:50 pandaJob.out [2021-08-22 12:58:30] -rw------- 1 boinc boinc 463 Aug 22 12:50 setup.sh.local [2021-08-22 12:58:30] -rw------- 1 boinc boinc 1079093 Aug 22 12:50 agis_schedconf.cvmfs.json [2021-08-22 12:58:30] -rw------- 1 boinc boinc 1949854 Aug 22 12:50 cric_ddmendpoints.json [2021-08-22 12:58:30] drwx------ 4 boinc boinc 4096 Aug 22 12:50 pilot2 [2021-08-22 12:58:30] -rw------- 1 boinc boinc 1975235 Aug 22 12:57 output.1.360ddb4b-a252-45ed-810e-45e074d18f2f_33294.pool.root [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 532 Aug 22 12:57 boinc_task_state.xml [2021-08-22 12:58:30] -rw------- 1 boinc boinc 286 Aug 22 12:57 memory_monitor_summary.json [2021-08-22 12:58:30] -rw------- 1 boinc boinc 171646 Aug 22 12:57 360ddb4b-a252-45ed-810e-45e074d18f2f_33294.1.job.log.tgz [2021-08-22 12:58:30] -rw------- 1 boinc boinc 6599 Aug 22 12:57 heartbeat.json [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 24 Aug 22 12:58 wrapper_checkpoint.txt [2021-08-22 12:58:30] -rw------- 1 boinc boinc 7368 Aug 22 12:58 pilotlog.txt [2021-08-22 12:58:30] -rw------- 1 boinc boinc 154503 Aug 22 12:58 360ddb4b-a252-45ed-810e-45e074d18f2f_33294.1.job.log [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 8192 Aug 22 12:58 boinc_mmap_file [2021-08-22 12:58:30] -rw------- 1 boinc boinc 536 Aug 22 12:58 output.list [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 10960 Aug 22 12:58 runtime_log.err [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 748 Aug 22 12:58 runtime_log [2021-08-22 12:58:30] -rw------- 1 boinc boinc 2324480 Aug 22 12:58 result.tar.gz [2021-08-22 12:58:30] -rw------- 1 boinc boinc 559 Aug 22 12:58 CB3LDmMq5bzn7Olcko1bjSoqABFKDmABFKDmumdXDmRwGKDmAO8VMo.diag [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 28822 Aug 22 12:58 stderr.txt [2021-08-22 12:58:30] HITS file was successfully produced: [2021-08-22 12:58:30] -rw------- 1 boinc boinc 1975235 Aug 22 12:57 shared/HITS.pool.root.1 [2021-08-22 12:58:30] *** Contents of shared directory: *** [2021-08-22 12:58:30] total 41308 [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 16551 Aug 22 12:50 start_atlas.sh [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 350477 Aug 22 12:50 input.tar.gz [2021-08-22 12:58:30] -rw-r--r-- 1 boinc boinc 37620382 Aug 22 12:50 ATLAS.root_0 [2021-08-22 12:58:30] -rw------- 1 boinc boinc 1975235 Aug 22 12:57 HITS.pool.root.1 [2021-08-22 12:58:30] -rw------- 1 boinc boinc 2324480 Aug 22 12:58 result.tar.gz 12:58:31 (2289489): run_atlas exited; CPU time 177.543585 12:58:31 (2289489): called boinc_finish(0) </stderr_txt> ]]>
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