Name uYgMDmR7Qczn7Olcko1bjSoqABFKDmABFKDmumdXDmTxGKDmmf094n_0
Workunit 2121934
Created 23 Aug 2021, 15:35:32 UTC
Sent 23 Aug 2021, 15:36:08 UTC
Report deadline 30 Aug 2021, 15:36:08 UTC
Received 23 Aug 2021, 15:45:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4462
Run time 8 min 29 sec
CPU time 6 min 33 sec
Validate state Valid
Credit 58.18
Device peak FLOPS 49.38 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.51 GB
Peak swap size 2.12 GB
Peak disk usage 80.72 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
11:36:27 (1145047): wrapper (7.7.26015): starting
11:36:27 (1145047): wrapper: running run_atlas (--nthreads 8)
[2021-08-23 11:36:27] Arguments: --nthreads 8
[2021-08-23 11:36:27] Threads: 8
[2021-08-23 11:36:27] Checking for CVMFS
[2021-08-23 11:36:28] Probing /cvmfs/atlas.cern.ch... OK
[2021-08-23 11:36:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-08-23 11:36:29] Running cvmfs_config stat atlas.cern.ch
[2021-08-23 11:36:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-08-23 11:36:29] 2.9.0.0 1145620 0 24756 90796 3 1 5365471 6144001 0 130560 0 0 0.000 528 834 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.100:3128 1
[2021-08-23 11:36:29] CVMFS is ok
[2021-08-23 11:36:29] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-08-23 11:36:29] Checking for singularity binary...
[2021-08-23 11:36:29] Using singularity found in PATH at /usr/local/bin/singularity
[2021-08-23 11:36:29] Running /usr/local/bin/singularity --version
[2021-08-23 11:36:29] singularity version 3.8.1
[2021-08-23 11:36:29] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-08-23 11:36:30] WARNING: While bind mounting '/cvmfs:/cvmfs': destination is already in the mount point list ORTHANC
[2021-08-23 11:36:30] Singularity works
[2021-08-23 11:36:30] Set ATHENA_PROC_NUMBER=8
[2021-08-23 11:36:30] Starting ATLAS job with PandaID=5163391429
[2021-08-23 11:36:30] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/12 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-08-23 11:44:53]  *** The last 200 lines of the pilot log: ***
[2021-08-23 11:44:53]     "transform": {
[2021-08-23 11:44:53]       "cpuEfficiency": 0.9076, 
[2021-08-23 11:44:53]       "cpuPWEfficiency": 0.9076, 
[2021-08-23 11:44:53]       "cpuTime": 2, 
[2021-08-23 11:44:53]       "cpuTimeTotal": 382, 
[2021-08-23 11:44:53]       "externalCpuTime": 2, 
[2021-08-23 11:44:53]       "processedEvents": 2, 
[2021-08-23 11:44:53]       "trfPredata": null, 
[2021-08-23 11:44:53]       "wallTime": 422
[2021-08-23 11:44:53]     }
[2021-08-23 11:44:53]   }
[2021-08-23 11:44:53] }
[2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | DEBUG    | pilot.user.atlas.common          | update_server             | no need to update logstash for this job
[2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | INFO     | pilot.control.job                | send_state                | job 5163391429 has finished - writing final server update
[2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 8
[2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -37171849 B to job metrics
[2021-08-23 11:44:53] 2021-08-23 15:44:14,334 | WARNING  | pilot.api.analytics              | get_fitted_data           | wrong length of table data, x=[1629733020.0, 1629733081.0, 1629733142.0, 1629733203.0, 1629733264.0,
[2021-08-23 11:44:53] 2021-08-23 15:44:14,334 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=5 nEvents=2 dbTime=19.05 dbData=4274626 eventnumber=2002"
[2021-08-23 11:44:53] 2021-08-23 15:44:14,334 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.500000
[2021-08-23 11:44:53] 2021-08-23 15:44:14,334 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,353 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-08-23 11:44:53] 2021-08-23 15:44:14,402 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-5163391429/memory_monitor_summary.json (trf n
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 4.857, 'nthreads': 5.714, 'pss': 1270259.0, 'rchar': 1542017.0
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 0 s
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 6 s
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | . total setup = 6 s
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 429 s
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 0 s
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-08-23 11:44:53] 2021-08-23 15:44:14,404 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5163391429', 'state': 'finished', 'timestamp': '2021-08-23T11:44:14
[2021-08-23 11:44:53] 2021-08-23 15:44:14,404 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/12/heartbeat.json
[2021-08-23 11:44:53] 2021-08-23 15:44:14,404 | DEBUG    | pilot.control.job                | queue_monitor             | job 5163391429 was dequeued from the monitored payloads queue
[2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | INFO     | pilot.control.job                | make_job_report           | 
[2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5163391429
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 397 s
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | pid: 1155506
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | pgrp: 1155506
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | corecount: 8
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | sizes: {17244937: 3889410, 17244948: 3889296, 17245386: 3909551, 17245387: 3909550, 17245388: 391907
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.control.job                | make_job_report           | 
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/12:
[2021-08-23 11:44:53] 
[2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/12
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | DEBUG    | pilot.control.job                | has_job_completed         | total 43128
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  1079172 Aug 23 11:36 agis_schedconf.cvmfs.json
[2021-08-23 11:44:53] -rw------- 1 boinc boinc   140720 Aug 23 11:44 b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.1.job.log
[2021-08-23 11:44:53] -rw------- 1 boinc boinc   153939 Aug 23 11:44 b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.1.job.log.tgz
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc        0 Aug 23 11:36 boinc_lockfile
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     8192 Aug 23 11:44 boinc_mmap_file
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc      532 Aug 23 11:43 boinc_task_state.xml
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  1949854 Aug 23 11:36 cric_ddmendpoints.json
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 38019645 Aug 23 11:36 EVNT.04972714._000023.pool.root.1
[2021-08-23 11:44:53] -rw------- 1 boinc boinc     6482 Aug 23 11:44 heartbeat.json
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     9182 Aug 23 11:36 init_data.xml
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc   354339 Aug 23 11:36 input.tar.gz
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc      112 Aug 23 11:36 job.xml
[2021-08-23 11:44:53] -rw------- 1 boinc boinc      992 Aug 23 11:44 memory_monitor_summary.json
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  1815651 Aug 23 11:44 output.1.b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.pool.root
[2021-08-23 11:44:53] -rw------- 1 boinc boinc      536 Aug 23 11:44 output.list
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     2595 Aug 23 11:36 pandaJob.out
[2021-08-23 11:44:53] drwxrwx--- 2 boinc boinc     4096 Aug 23 11:44 PanDA_Pilot-5163391429/
[2021-08-23 11:44:53] drwx------ 4 boinc boinc     4096 Aug 23 11:36 pilot2/
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc   344503 Aug 13 08:13 pilot2.tar.gz
[2021-08-23 11:44:53] -rw------- 1 boinc boinc   121333 Aug 23 11:44 pilotlog.txt
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     4534 Aug 23 11:35 queuedata.json
[2021-08-23 11:44:53] -rwxr-xr-x 1 boinc boinc     6966 Aug 23 11:36 run_atlas*
[2021-08-23 11:44:53] -rwx------ 1 boinc boinc    20631 Aug 23 11:32 runpilot2-wrapper.sh*
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc      407 Aug 23 11:36 runtime_log
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     6960 Aug 23 11:36 runtime_log.err
[2021-08-23 11:44:53] -rw------- 1 boinc boinc      463 Aug 23 11:36 setup.sh.local
[2021-08-23 11:44:53] drwxrwx--x 2 boinc boinc     4096 Aug 23 11:36 shared/
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc    16569 Aug 23 11:36 start_atlas.sh
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     1833 Aug 23 11:36 stderr.txt
[2021-08-23 11:44:53] -rw------- 1 boinc boinc      130 Aug 23 11:36 uYgMDmR7Qczn7Olcko1bjSoqABFKDmABFKDmumdXDmTxGKDmmf094n.diag
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc      107 Aug 23 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc       24 Aug 23 11:44 wrapper_checkpoint.txt
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO     | pilot.control.job                | has_job_completed         | job 5163391429 has completed (purged errors)
[2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-08-23 11:44:53] 2021-08-23 15:44:14,475 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/12/PanDA_Pilot-5163391429
[2021-08-23 11:44:53] 2021-08-23 15:44:15,480 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [1155506]
[2021-08-23 11:44:53] 2021-08-23 15:44:15,480 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 1155506
[2021-08-23 11:44:53] 2021-08-23 15:44:15,480 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-08-23 11:44:53] 2021-08-23 15:44:16,484 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-08-23 11:44:53] 2021-08-23 15:44:16,484 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=1155506
[2021-08-23 11:44:53] 2021-08-23 15:44:16,536 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [1155506] (in reverse order)
[2021-08-23 11:44:53] 2021-08-23 15:44:16,579 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-23 11:44:53] 2021-08-23 15:44:16,581 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.4 (12)  ***
[2021-08-23 11:44:53] 2021-08-23 15:44:16,581 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-23 11:44:53] 2021-08-23 15:44:16,581 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-08-23 11:44:53] 2021-08-23 15:44:16,601 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-08-23 11:44:53] 2021-08-23 15:44:16,668 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-08-23 11:44:53] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-08-23 11:44:53] Distributor ID:	CentOS
[2021-08-23 11:44:53] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-08-23 11:44:53] Release:	7.8.2003
[2021-08-23 11:44:53] Codename:	Core
[2021-08-23 11:44:53] 2021-08-23 15:44:16,668 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *****************************************
[2021-08-23 11:44:53] 2021-08-23 15:44:17,171 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/12
[2021-08-23 11:44:53] 2021-08-23 15:44:17,184 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (426013360128 B)
[2021-08-23 11:44:53] 2021-08-23 15:44:17,184 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-08-23 11:44:53] 2021-08-23 15:44:17,192 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:17,192 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:17,383 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:17,383 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:17,384 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-08-23 11:44:53] 2021-08-23 15:44:17,384 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:17,384 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:17,956 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-08-23 11:44:53] 2021-08-23 15:44:17,984 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:17,984 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:18,084 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-08-23 11:44:53] 2021-08-23 15:44:18,084 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:18,084 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:18,096 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-08-23 11:44:53] 2021-08-23 15:44:18,096 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:18,096 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:18,176 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:18,176 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:18,186 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:18,186 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:18,236 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:18,236 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:18,251 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:18,251 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:18,536 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:18,536 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:19,464 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-08-23 11:44:53] 2021-08-23 15:44:19,464 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:19,464 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:20,957 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-08-23 11:44:53] 2021-08-23 15:44:20,957 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:52,911 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s)
[2021-08-23 11:44:53] 2021-08-23 15:44:52,912 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-08-23 11:44:53] 2021-08-23 15:44:52,912 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-08-23 11:44:53] 2021-08-23 15:44:52,912 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:53,349 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-08-23 11:44:53] 2021-08-23 15:44:53,350 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-08-23 11:44:53] 2021-08-23 15:44:53,350 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-08-23 11:44:53] 2021-08-23 15:44:53,384 [wrapper] ==== pilot stdout END ====
[2021-08-23 11:44:53] 2021-08-23 15:44:53,387 [wrapper] ==== wrapper stdout RESUME ====
[2021-08-23 11:44:53] 2021-08-23 15:44:53,391 [wrapper] Pilot exit status: 0
[2021-08-23 11:44:53] 2021-08-23 15:44:53,401 [wrapper] pandaids: 5163391429
[2021-08-23 11:44:53] 2021-08-23 15:44:53,408 [wrapper] apfmon messages muted
[2021-08-23 11:44:53] 2021-08-23 15:44:53,411 [wrapper] Test setup, not cleaning
[2021-08-23 11:44:53] 2021-08-23 15:44:53,415 [wrapper] ==== wrapper stdout END ====
[2021-08-23 11:44:53] 2021-08-23 15:44:53,418 [wrapper] ==== wrapper stderr END ====
[2021-08-23 11:44:53] 2021-08-23 15:44:53,425 [wrapper] wrapperexiting ec=0, duration=503
[2021-08-23 11:44:53] 2021-08-23 15:44:53,428 [wrapper] apfmon messages muted
[2021-08-23 11:44:53]  *** Error codes and diagnostics ***
[2021-08-23 11:44:53]     "exeErrorCode": 0,
[2021-08-23 11:44:53]     "exeErrorDiag": "",
[2021-08-23 11:44:53]     "pilotErrorCode": 0,
[2021-08-23 11:44:53]     "pilotErrorDiag": "",
[2021-08-23 11:44:53]  *** Listing of results directory ***
[2021-08-23 11:44:53] total 45144
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc   344503 Aug 13 08:13 pilot2.tar.gz
[2021-08-23 11:44:53] -rwx------ 1 boinc boinc    20631 Aug 23 11:32 runpilot2-wrapper.sh
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     4534 Aug 23 11:35 queuedata.json
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc      107 Aug 23 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2021-08-23 11:44:53] -rwxr-xr-x 1 boinc boinc     6966 Aug 23 11:36 run_atlas
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc      112 Aug 23 11:36 job.xml
[2021-08-23 11:44:53] drwxrwx--x 2 boinc boinc     4096 Aug 23 11:36 shared
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     9182 Aug 23 11:36 init_data.xml
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc        0 Aug 23 11:36 boinc_lockfile
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc    16569 Aug 23 11:36 start_atlas.sh
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc   354339 Aug 23 11:36 input.tar.gz
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 38019645 Aug 23 11:36 EVNT.04972714._000023.pool.root.1
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     2595 Aug 23 11:36 pandaJob.out
[2021-08-23 11:44:53] -rw------- 1 boinc boinc      463 Aug 23 11:36 setup.sh.local
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  1079172 Aug 23 11:36 agis_schedconf.cvmfs.json
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  1949854 Aug 23 11:36 cric_ddmendpoints.json
[2021-08-23 11:44:53] drwx------ 4 boinc boinc     4096 Aug 23 11:36 pilot2
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc      532 Aug 23 11:43 boinc_task_state.xml
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  1815651 Aug 23 11:44 output.1.b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.pool.root
[2021-08-23 11:44:53] -rw------- 1 boinc boinc      992 Aug 23 11:44 memory_monitor_summary.json
[2021-08-23 11:44:53] -rw------- 1 boinc boinc   153939 Aug 23 11:44 b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.1.job.log.tgz
[2021-08-23 11:44:53] -rw------- 1 boinc boinc     6482 Aug 23 11:44 heartbeat.json
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc     8192 Aug 23 11:44 boinc_mmap_file
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc       24 Aug 23 11:44 wrapper_checkpoint.txt
[2021-08-23 11:44:53] -rw------- 1 boinc boinc     7523 Aug 23 11:44 pilotlog.txt
[2021-08-23 11:44:53] -rw------- 1 boinc boinc   155620 Aug 23 11:44 b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.1.job.log
[2021-08-23 11:44:53] -rw------- 1 boinc boinc      536 Aug 23 11:44 output.list
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc      748 Aug 23 11:44 runtime_log
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  2140160 Aug 23 11:44 result.tar.gz
[2021-08-23 11:44:53] -rw------- 1 boinc boinc      556 Aug 23 11:44 uYgMDmR7Qczn7Olcko1bjSoqABFKDmABFKDmumdXDmTxGKDmmf094n.diag
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc    10955 Aug 23 11:44 runtime_log.err
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc    29157 Aug 23 11:44 stderr.txt
[2021-08-23 11:44:53] HITS file was successfully produced:
[2021-08-23 11:44:53] -rw------- 1 boinc boinc 1815651 Aug 23 11:44 shared/HITS.pool.root.1
[2021-08-23 11:44:53]  *** Contents of shared directory: ***
[2021-08-23 11:44:53] total 41368
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc    16569 Aug 23 11:36 start_atlas.sh
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc   354339 Aug 23 11:36 input.tar.gz
[2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 38019645 Aug 23 11:36 ATLAS.root_0
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  1815651 Aug 23 11:44 HITS.pool.root.1
[2021-08-23 11:44:53] -rw------- 1 boinc boinc  2140160 Aug 23 11:44 result.tar.gz
11:44:55 (1145047): run_atlas exited; CPU time 393.386903
11:44:55 (1145047): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN