Name | uYgMDmR7Qczn7Olcko1bjSoqABFKDmABFKDmumdXDmTxGKDmmf094n_0 |
Workunit | 2121934 |
Created | 23 Aug 2021, 15:35:32 UTC |
Sent | 23 Aug 2021, 15:36:08 UTC |
Report deadline | 30 Aug 2021, 15:36:08 UTC |
Received | 23 Aug 2021, 15:45:58 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4462 |
Run time | 8 min 29 sec |
CPU time | 6 min 33 sec |
Validate state | Valid |
Credit | 58.18 |
Device peak FLOPS | 49.38 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.51 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 80.72 MB |
<core_client_version>7.16.6</core_client_version> <![CDATA[ <stderr_txt> 11:36:27 (1145047): wrapper (7.7.26015): starting 11:36:27 (1145047): wrapper: running run_atlas (--nthreads 8) [2021-08-23 11:36:27] Arguments: --nthreads 8 [2021-08-23 11:36:27] Threads: 8 [2021-08-23 11:36:27] Checking for CVMFS [2021-08-23 11:36:28] Probing /cvmfs/atlas.cern.ch... OK [2021-08-23 11:36:29] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-08-23 11:36:29] Running cvmfs_config stat atlas.cern.ch [2021-08-23 11:36:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-08-23 11:36:29] 2.9.0.0 1145620 0 24756 90796 3 1 5365471 6144001 0 130560 0 0 0.000 528 834 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.100:3128 1 [2021-08-23 11:36:29] CVMFS is ok [2021-08-23 11:36:29] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-08-23 11:36:29] Checking for singularity binary... [2021-08-23 11:36:29] Using singularity found in PATH at /usr/local/bin/singularity [2021-08-23 11:36:29] Running /usr/local/bin/singularity --version [2021-08-23 11:36:29] singularity version 3.8.1 [2021-08-23 11:36:29] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-08-23 11:36:30] WARNING: While bind mounting '/cvmfs:/cvmfs': destination is already in the mount point list ORTHANC [2021-08-23 11:36:30] Singularity works [2021-08-23 11:36:30] Set ATHENA_PROC_NUMBER=8 [2021-08-23 11:36:30] Starting ATLAS job with PandaID=5163391429 [2021-08-23 11:36:30] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/12 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-08-23 11:44:53] *** The last 200 lines of the pilot log: *** [2021-08-23 11:44:53] "transform": { [2021-08-23 11:44:53] "cpuEfficiency": 0.9076, [2021-08-23 11:44:53] "cpuPWEfficiency": 0.9076, [2021-08-23 11:44:53] "cpuTime": 2, [2021-08-23 11:44:53] "cpuTimeTotal": 382, [2021-08-23 11:44:53] "externalCpuTime": 2, [2021-08-23 11:44:53] "processedEvents": 2, [2021-08-23 11:44:53] "trfPredata": null, [2021-08-23 11:44:53] "wallTime": 422 [2021-08-23 11:44:53] } [2021-08-23 11:44:53] } [2021-08-23 11:44:53] } [2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | INFO | pilot.control.job | send_state | job 5163391429 has finished - writing final server update [2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 8 [2021-08-23 11:44:53] 2021-08-23 15:44:14,333 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -37171849 B to job metrics [2021-08-23 11:44:53] 2021-08-23 15:44:14,334 | WARNING | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[1629733020.0, 1629733081.0, 1629733142.0, 1629733203.0, 1629733264.0, [2021-08-23 11:44:53] 2021-08-23 15:44:14,334 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=5 nEvents=2 dbTime=19.05 dbData=4274626 eventnumber=2002" [2021-08-23 11:44:53] 2021-08-23 15:44:14,334 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.500000 [2021-08-23 11:44:53] 2021-08-23 15:44:14,334 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-08-23 11:44:53] 2021-08-23 15:44:14,353 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-08-23 11:44:53] 2021-08-23 15:44:14,402 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-5163391429/memory_monitor_summary.json (trf n [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.857, 'nthreads': 5.714, 'pss': 1270259.0, 'rchar': 1542017.0 [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | . initial setup = 0 s [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | . payload setup = 6 s [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | . total setup = 6 s [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | . payload execution = 429 s [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | INFO | pilot.util.timing | timing_report | .............................. [2021-08-23 11:44:53] 2021-08-23 15:44:14,403 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-08-23 11:44:53] 2021-08-23 15:44:14,404 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5163391429', 'state': 'finished', 'timestamp': '2021-08-23T11:44:14 [2021-08-23 11:44:53] 2021-08-23 15:44:14,404 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/12/heartbeat.json [2021-08-23 11:44:53] 2021-08-23 15:44:14,404 | DEBUG | pilot.control.job | queue_monitor | job 5163391429 was dequeued from the monitored payloads queue [2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | INFO | pilot.control.job | make_job_report | [2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | INFO | pilot.control.job | make_job_report | job summary report [2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-23 11:44:53] 2021-08-23 15:44:14,458 | INFO | pilot.control.job | make_job_report | PanDA job id: 5163391429 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 397 s [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | pid: 1155506 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | pgrp: 1155506 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | corecount: 8 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | event service: False [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | sizes: {17244937: 3889410, 17244948: 3889296, 17245386: 3909551, 17245387: 3909550, 17245388: 391907 [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.control.job | make_job_report | [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/12: [2021-08-23 11:44:53] [2021-08-23 11:44:53] 2021-08-23 15:44:14,459 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/12 [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | DEBUG | pilot.control.job | has_job_completed | total 43128 [2021-08-23 11:44:53] -rw------- 1 boinc boinc 1079172 Aug 23 11:36 agis_schedconf.cvmfs.json [2021-08-23 11:44:53] -rw------- 1 boinc boinc 140720 Aug 23 11:44 b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.1.job.log [2021-08-23 11:44:53] -rw------- 1 boinc boinc 153939 Aug 23 11:44 b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.1.job.log.tgz [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 0 Aug 23 11:36 boinc_lockfile [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 8192 Aug 23 11:44 boinc_mmap_file [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 532 Aug 23 11:43 boinc_task_state.xml [2021-08-23 11:44:53] -rw------- 1 boinc boinc 1949854 Aug 23 11:36 cric_ddmendpoints.json [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 38019645 Aug 23 11:36 EVNT.04972714._000023.pool.root.1 [2021-08-23 11:44:53] -rw------- 1 boinc boinc 6482 Aug 23 11:44 heartbeat.json [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 9182 Aug 23 11:36 init_data.xml [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 354339 Aug 23 11:36 input.tar.gz [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 112 Aug 23 11:36 job.xml [2021-08-23 11:44:53] -rw------- 1 boinc boinc 992 Aug 23 11:44 memory_monitor_summary.json [2021-08-23 11:44:53] -rw------- 1 boinc boinc 1815651 Aug 23 11:44 output.1.b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.pool.root [2021-08-23 11:44:53] -rw------- 1 boinc boinc 536 Aug 23 11:44 output.list [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 2595 Aug 23 11:36 pandaJob.out [2021-08-23 11:44:53] drwxrwx--- 2 boinc boinc 4096 Aug 23 11:44 PanDA_Pilot-5163391429/ [2021-08-23 11:44:53] drwx------ 4 boinc boinc 4096 Aug 23 11:36 pilot2/ [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 344503 Aug 13 08:13 pilot2.tar.gz [2021-08-23 11:44:53] -rw------- 1 boinc boinc 121333 Aug 23 11:44 pilotlog.txt [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 4534 Aug 23 11:35 queuedata.json [2021-08-23 11:44:53] -rwxr-xr-x 1 boinc boinc 6966 Aug 23 11:36 run_atlas* [2021-08-23 11:44:53] -rwx------ 1 boinc boinc 20631 Aug 23 11:32 runpilot2-wrapper.sh* [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 407 Aug 23 11:36 runtime_log [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 6960 Aug 23 11:36 runtime_log.err [2021-08-23 11:44:53] -rw------- 1 boinc boinc 463 Aug 23 11:36 setup.sh.local [2021-08-23 11:44:53] drwxrwx--x 2 boinc boinc 4096 Aug 23 11:36 shared/ [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 16569 Aug 23 11:36 start_atlas.sh [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 1833 Aug 23 11:36 stderr.txt [2021-08-23 11:44:53] -rw------- 1 boinc boinc 130 Aug 23 11:36 uYgMDmR7Qczn7Olcko1bjSoqABFKDmABFKDmumdXDmTxGKDmmf094n.diag [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 107 Aug 23 11:36 wrapper_26015_x86_64-pc-linux-gnu [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 24 Aug 23 11:44 wrapper_checkpoint.txt [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,473 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO | pilot.control.job | has_job_completed | job 5163391429 has completed (purged errors) [2021-08-23 11:44:53] 2021-08-23 15:44:14,474 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-08-23 11:44:53] 2021-08-23 15:44:14,475 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/12/PanDA_Pilot-5163391429 [2021-08-23 11:44:53] 2021-08-23 15:44:15,480 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [1155506] [2021-08-23 11:44:53] 2021-08-23 15:44:15,480 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 1155506 [2021-08-23 11:44:53] 2021-08-23 15:44:15,480 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-08-23 11:44:53] 2021-08-23 15:44:16,484 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-08-23 11:44:53] 2021-08-23 15:44:16,484 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=1155506 [2021-08-23 11:44:53] 2021-08-23 15:44:16,536 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [1155506] (in reverse order) [2021-08-23 11:44:53] 2021-08-23 15:44:16,579 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | INFO | pilot.control.job | retrieve | ready for new job [2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-08-23 11:44:53] 2021-08-23 15:44:16,580 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-23 11:44:53] 2021-08-23 15:44:16,581 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.4 (12) *** [2021-08-23 11:44:53] 2021-08-23 15:44:16,581 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-23 11:44:53] 2021-08-23 15:44:16,581 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-08-23 11:44:53] 2021-08-23 15:44:16,601 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-08-23 11:44:53] 2021-08-23 15:44:16,668 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-08-23 11:44:53] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-08-23 11:44:53] Distributor ID: CentOS [2021-08-23 11:44:53] Description: CentOS Linux release 7.8.2003 (Core) [2021-08-23 11:44:53] Release: 7.8.2003 [2021-08-23 11:44:53] Codename: Core [2021-08-23 11:44:53] 2021-08-23 15:44:16,668 | INFO | pilot.util.auxiliary | pilot_version_banner | ***************************************** [2021-08-23 11:44:53] 2021-08-23 15:44:17,171 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/12 [2021-08-23 11:44:53] 2021-08-23 15:44:17,184 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (426013360128 B) [2021-08-23 11:44:53] 2021-08-23 15:44:17,184 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-08-23 11:44:53] 2021-08-23 15:44:17,185 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-08-23 11:44:53] 2021-08-23 15:44:17,192 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:17,192 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:17,383 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:17,383 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:17,384 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-08-23 11:44:53] 2021-08-23 15:44:17,384 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:17,384 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:17,956 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-08-23 11:44:53] 2021-08-23 15:44:17,984 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:17,984 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:18,084 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-08-23 11:44:53] 2021-08-23 15:44:18,084 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:18,084 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:18,096 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-08-23 11:44:53] 2021-08-23 15:44:18,096 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:18,096 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:18,176 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:18,176 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:18,186 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:18,186 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:18,236 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:18,236 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:18,251 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:18,251 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:18,536 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:18,536 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:19,464 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-08-23 11:44:53] 2021-08-23 15:44:19,464 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:19,464 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:20,957 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-08-23 11:44:53] 2021-08-23 15:44:20,957 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:52,911 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s) [2021-08-23 11:44:53] 2021-08-23 15:44:52,912 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-08-23 11:44:53] 2021-08-23 15:44:52,912 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-08-23 11:44:53] 2021-08-23 15:44:52,912 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-08-23 11:44:53] 2021-08-23 15:44:53,349 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-08-23 11:44:53] 2021-08-23 15:44:53,350 | INFO | root | wrap_up | traces error code: 0 [2021-08-23 11:44:53] 2021-08-23 15:44:53,350 | INFO | root | wrap_up | pilot has finished [2021-08-23 11:44:53] 2021-08-23 15:44:53,384 [wrapper] ==== pilot stdout END ==== [2021-08-23 11:44:53] 2021-08-23 15:44:53,387 [wrapper] ==== wrapper stdout RESUME ==== [2021-08-23 11:44:53] 2021-08-23 15:44:53,391 [wrapper] Pilot exit status: 0 [2021-08-23 11:44:53] 2021-08-23 15:44:53,401 [wrapper] pandaids: 5163391429 [2021-08-23 11:44:53] 2021-08-23 15:44:53,408 [wrapper] apfmon messages muted [2021-08-23 11:44:53] 2021-08-23 15:44:53,411 [wrapper] Test setup, not cleaning [2021-08-23 11:44:53] 2021-08-23 15:44:53,415 [wrapper] ==== wrapper stdout END ==== [2021-08-23 11:44:53] 2021-08-23 15:44:53,418 [wrapper] ==== wrapper stderr END ==== [2021-08-23 11:44:53] 2021-08-23 15:44:53,425 [wrapper] wrapperexiting ec=0, duration=503 [2021-08-23 11:44:53] 2021-08-23 15:44:53,428 [wrapper] apfmon messages muted [2021-08-23 11:44:53] *** Error codes and diagnostics *** [2021-08-23 11:44:53] "exeErrorCode": 0, [2021-08-23 11:44:53] "exeErrorDiag": "", [2021-08-23 11:44:53] "pilotErrorCode": 0, [2021-08-23 11:44:53] "pilotErrorDiag": "", [2021-08-23 11:44:53] *** Listing of results directory *** [2021-08-23 11:44:53] total 45144 [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 344503 Aug 13 08:13 pilot2.tar.gz [2021-08-23 11:44:53] -rwx------ 1 boinc boinc 20631 Aug 23 11:32 runpilot2-wrapper.sh [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 4534 Aug 23 11:35 queuedata.json [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 107 Aug 23 11:36 wrapper_26015_x86_64-pc-linux-gnu [2021-08-23 11:44:53] -rwxr-xr-x 1 boinc boinc 6966 Aug 23 11:36 run_atlas [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 112 Aug 23 11:36 job.xml [2021-08-23 11:44:53] drwxrwx--x 2 boinc boinc 4096 Aug 23 11:36 shared [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 9182 Aug 23 11:36 init_data.xml [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 0 Aug 23 11:36 boinc_lockfile [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 16569 Aug 23 11:36 start_atlas.sh [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 354339 Aug 23 11:36 input.tar.gz [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 38019645 Aug 23 11:36 EVNT.04972714._000023.pool.root.1 [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 2595 Aug 23 11:36 pandaJob.out [2021-08-23 11:44:53] -rw------- 1 boinc boinc 463 Aug 23 11:36 setup.sh.local [2021-08-23 11:44:53] -rw------- 1 boinc boinc 1079172 Aug 23 11:36 agis_schedconf.cvmfs.json [2021-08-23 11:44:53] -rw------- 1 boinc boinc 1949854 Aug 23 11:36 cric_ddmendpoints.json [2021-08-23 11:44:53] drwx------ 4 boinc boinc 4096 Aug 23 11:36 pilot2 [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 532 Aug 23 11:43 boinc_task_state.xml [2021-08-23 11:44:53] -rw------- 1 boinc boinc 1815651 Aug 23 11:44 output.1.b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.pool.root [2021-08-23 11:44:53] -rw------- 1 boinc boinc 992 Aug 23 11:44 memory_monitor_summary.json [2021-08-23 11:44:53] -rw------- 1 boinc boinc 153939 Aug 23 11:44 b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.1.job.log.tgz [2021-08-23 11:44:53] -rw------- 1 boinc boinc 6482 Aug 23 11:44 heartbeat.json [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 8192 Aug 23 11:44 boinc_mmap_file [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 24 Aug 23 11:44 wrapper_checkpoint.txt [2021-08-23 11:44:53] -rw------- 1 boinc boinc 7523 Aug 23 11:44 pilotlog.txt [2021-08-23 11:44:53] -rw------- 1 boinc boinc 155620 Aug 23 11:44 b9e0a9a1-2779-4e3f-a9c3-1c823a5822e4_27724.1.job.log [2021-08-23 11:44:53] -rw------- 1 boinc boinc 536 Aug 23 11:44 output.list [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 748 Aug 23 11:44 runtime_log [2021-08-23 11:44:53] -rw------- 1 boinc boinc 2140160 Aug 23 11:44 result.tar.gz [2021-08-23 11:44:53] -rw------- 1 boinc boinc 556 Aug 23 11:44 uYgMDmR7Qczn7Olcko1bjSoqABFKDmABFKDmumdXDmTxGKDmmf094n.diag [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 10955 Aug 23 11:44 runtime_log.err [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 29157 Aug 23 11:44 stderr.txt [2021-08-23 11:44:53] HITS file was successfully produced: [2021-08-23 11:44:53] -rw------- 1 boinc boinc 1815651 Aug 23 11:44 shared/HITS.pool.root.1 [2021-08-23 11:44:53] *** Contents of shared directory: *** [2021-08-23 11:44:53] total 41368 [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 16569 Aug 23 11:36 start_atlas.sh [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 354339 Aug 23 11:36 input.tar.gz [2021-08-23 11:44:53] -rw-r--r-- 1 boinc boinc 38019645 Aug 23 11:36 ATLAS.root_0 [2021-08-23 11:44:53] -rw------- 1 boinc boinc 1815651 Aug 23 11:44 HITS.pool.root.1 [2021-08-23 11:44:53] -rw------- 1 boinc boinc 2140160 Aug 23 11:44 result.tar.gz 11:44:55 (1145047): run_atlas exited; CPU time 393.386903 11:44:55 (1145047): called boinc_finish(0) </stderr_txt> ]]>
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