Name | gVVMDmOitozn7Olcko1bjSoqABFKDmABFKDmZr2WDm2MFKDm5EZSbm_0 |
Workunit | 2131457 |
Created | 27 Sep 2021, 0:30:25 UTC |
Sent | 27 Sep 2021, 0:37:58 UTC |
Report deadline | 4 Oct 2021, 0:37:58 UTC |
Received | 27 Sep 2021, 2:22:54 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 25 min 53 sec |
CPU time | 21 min 26 sec |
Validate state | Valid |
Credit | 37.43 |
Device peak FLOPS | 6.11 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.40 GB |
Peak swap size | 27.53 GB |
Peak disk usage | 81.47 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 20:56:26 (41839): wrapper (7.7.26015): starting 20:56:26 (41839): wrapper: running run_atlas (--nthreads 2) [2021-09-26 20:56:26] Arguments: --nthreads 2 [2021-09-26 20:56:26] Threads: 2 [2021-09-26 20:56:26] Checking for CVMFS [2021-09-26 20:56:27] Probing /cvmfs/atlas.cern.ch... OK [2021-09-26 20:56:28] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-09-26 20:56:28] Running cvmfs_config stat atlas.cern.ch [2021-09-26 20:56:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-09-26 20:56:29] 2.9.0.0 147949 8574 72388 92886 1 117 3855553 4194305 6016 130560 0 74347821 99.993 618051 877 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-09-26 20:56:29] CVMFS is ok [2021-09-26 20:56:30] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-09-26 20:56:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-09-26 20:56:30] Small home clusters do not require a local http proxy but it is suggested if [2021-09-26 20:56:30] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-09-26 20:56:30] Further information can be found at the LHC@home message board. [2021-09-26 20:56:30] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-09-26 20:56:30] Checking for singularity binary... [2021-09-26 20:56:30] Using singularity found in PATH at /usr/local/bin/singularity [2021-09-26 20:56:30] Running /usr/local/bin/singularity --version [2021-09-26 20:56:30] singularity version 3.7.2+10-ga969f0f8c [2021-09-26 20:56:30] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-09-26 20:56:31] E5-2670 [2021-09-26 20:56:31] Singularity works [2021-09-26 20:56:31] Set ATHENA_PROC_NUMBER=2 [2021-09-26 20:56:31] Starting ATLAS job with PandaID=5202789498 [2021-09-26 20:56:31] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/11 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-09-26 22:22:16] *** The last 200 lines of the pilot log: *** [2021-09-26 22:22:16] "cpuEfficiency": 0.15, [2021-09-26 22:22:16] "cpuPWEfficiency": 0.1624, [2021-09-26 22:22:16] "cpuTime": 8, [2021-09-26 22:22:16] "cpuTimeTotal": 1403, [2021-09-26 22:22:16] "externalCpuTime": 42, [2021-09-26 22:22:16] "processedEvents": 2, [2021-09-26 22:22:16] "trfPredata": null, [2021-09-26 22:22:16] "wallTime": 4219 [2021-09-26 22:22:16] } [2021-09-26 22:22:16] } [2021-09-26 22:22:16] } [2021-09-26 22:22:16] 2021-09-27 02:21:49,487 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-09-26 22:22:16] 2021-09-27 02:21:49,488 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-09-26 22:22:16] 2021-09-27 02:21:49,488 | INFO | pilot.control.job | send_state | job 5202789498 has finished - writing final server update [2021-09-26 22:22:16] 2021-09-27 02:21:49,488 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 2 [2021-09-26 22:22:16] 2021-09-27 02:21:49,488 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -33132366 B to job metrics [2021-09-26 22:22:16] 2021-09-27 02:21:49,490 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-09-26 22:22:16] 2021-09-27 02:21:49,490 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-09-26 22:22:16] 2021-09-27 02:21:49,497 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 76.93 B/s (using 65 data points, chi2=17731932) [2021-09-26 22:22:16] 2021-09-27 02:21:49,500 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=2 nEvents=2 dbTime=118.4 dbData=4308190 leak=76.93 chi2=17731932 eventn [2021-09-26 22:22:16] 2021-09-27 02:21:49,501 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.444444 [2021-09-26 22:22:16] 2021-09-27 02:21:49,501 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-09-26 22:22:16] 2021-09-27 02:21:49,526 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-09-26 22:22:16] 2021-09-27 02:21:50,086 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-5202789498/memory_monitor_summary.json (trf n [2021-09-26 22:22:16] 2021-09-27 02:21:50,088 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.916, 'nthreads': 6.625, 'pss': 1060774.0, 'rchar': 247468.0, [2021-09-26 22:22:16] 2021-09-27 02:21:50,088 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-09-26 22:22:16] 2021-09-27 02:21:50,088 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-09-26 22:22:16] 2021-09-27 02:21:50,088 | INFO | pilot.util.timing | timing_report | .............................. [2021-09-26 22:22:16] 2021-09-27 02:21:50,088 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-09-26 22:22:16] 2021-09-27 02:21:50,088 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-09-26 22:22:16] 2021-09-27 02:21:50,093 | INFO | pilot.util.timing | timing_report | . initial setup = 5 s [2021-09-26 22:22:16] 2021-09-27 02:21:50,093 | INFO | pilot.util.timing | timing_report | . payload setup = 229 s [2021-09-26 22:22:16] 2021-09-27 02:21:50,093 | INFO | pilot.util.timing | timing_report | . total setup = 234 s [2021-09-26 22:22:16] 2021-09-27 02:21:50,093 | INFO | pilot.util.timing | timing_report | . stage-in = 1 s [2021-09-26 22:22:16] 2021-09-27 02:21:50,093 | INFO | pilot.util.timing | timing_report | . payload execution = 4528 s [2021-09-26 22:22:16] 2021-09-27 02:21:50,093 | INFO | pilot.util.timing | timing_report | . stage-out = 5 s [2021-09-26 22:22:16] 2021-09-27 02:21:50,093 | INFO | pilot.util.timing | timing_report | .............................. [2021-09-26 22:22:16] 2021-09-27 02:21:50,094 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-09-26 22:22:16] 2021-09-27 02:21:50,094 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5202789498', 'state': 'finished', 'timestamp': '2021-09-26T22:21:49 [2021-09-26 22:22:16] 2021-09-27 02:21:50,095 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/11/heartbeat.json [2021-09-26 22:22:16] 2021-09-27 02:21:50,095 | DEBUG | pilot.control.job | queue_monitor | job 5202789498 was dequeued from the monitored payloads queue [2021-09-26 22:22:16] 2021-09-27 02:21:50,553 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-09-26 22:22:16] 2021-09-27 02:21:50,585 | INFO | pilot.control.job | make_job_report | [2021-09-26 22:22:16] 2021-09-27 02:21:50,585 | INFO | pilot.control.job | make_job_report | job summary report [2021-09-26 22:22:16] 2021-09-27 02:21:50,585 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-09-26 22:22:16] 2021-09-27 02:21:50,585 | INFO | pilot.control.job | make_job_report | PanDA job id: 5202789498 [2021-09-26 22:22:16] 2021-09-27 02:21:50,585 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-09-26 22:22:16] 2021-09-27 02:21:50,585 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-09-26 22:22:16] 2021-09-27 02:21:50,586 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-09-26 22:22:16] 2021-09-27 02:21:50,586 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-09-26 22:22:16] 2021-09-27 02:21:50,586 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-09-26 22:22:16] 2021-09-27 02:21:50,586 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-09-26 22:22:16] 2021-09-27 02:21:50,586 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-09-26 22:22:16] 2021-09-27 02:21:50,586 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-09-26 22:22:16] 2021-09-27 02:21:50,586 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-09-26 22:22:16] 2021-09-27 02:21:50,587 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1496 s [2021-09-26 22:22:16] 2021-09-27 02:21:50,587 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-09-26 22:22:16] 2021-09-27 02:21:50,587 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-09-26 22:22:16] 2021-09-27 02:21:50,587 | INFO | pilot.control.job | make_job_report | pid: 64963 [2021-09-26 22:22:16] 2021-09-27 02:21:50,587 | INFO | pilot.control.job | make_job_report | pgrp: 64963 [2021-09-26 22:22:16] 2021-09-27 02:21:50,587 | INFO | pilot.control.job | make_job_report | corecount: 2 [2021-09-26 22:22:16] 2021-09-27 02:21:50,587 | INFO | pilot.control.job | make_job_report | event service: False [2021-09-26 22:22:16] 2021-09-27 02:21:50,588 | INFO | pilot.control.job | make_job_report | sizes: {18097745: 3886723, 18097746: 3888000, 18097747: 3888113, 18097748: 3888275, 18097750: 388822 [2021-09-26 22:22:16] 2021-09-27 02:21:50,588 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-09-26 22:22:16] 2021-09-27 02:21:50,588 | INFO | pilot.control.job | make_job_report | [2021-09-26 22:22:16] 2021-09-27 02:21:50,588 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/11: [2021-09-26 22:22:16] [2021-09-26 22:22:16] 2021-09-27 02:21:50,588 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/11 [2021-09-26 22:22:16] 2021-09-27 02:21:51,066 | DEBUG | pilot.control.job | has_job_completed | total 42968 [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1082288 Sep 26 21:02 agis_schedconf.cvmfs.json [2021-09-26 22:22:16] -rw------- 1 boinc boinc 435460 Sep 26 22:21 b1fdc7cf-2d9f-46e2-a4a9-93b19b9a3e08_86046.1.job.log [2021-09-26 22:22:16] -rw------- 1 boinc boinc 474152 Sep 26 22:21 b1fdc7cf-2d9f-46e2-a4a9-93b19b9a3e08_86046.1.job.log.tgz [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 0 Sep 26 20:56 boinc_lockfile [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 8192 Sep 26 22:21 boinc_mmap_file [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 534 Sep 26 22:09 boinc_task_state.xml [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1944996 Sep 26 21:02 cric_ddmendpoints.json [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 37224345 Sep 26 20:56 EVNT.04972714._000026.pool.root.1 [2021-09-26 22:22:16] -rw------- 1 boinc boinc 130 Sep 26 20:56 gVVMDmOitozn7Olcko1bjSoqABFKDmABFKDmZr2WDm2MFKDm5EZSbm.diag [2021-09-26 22:22:16] -rw------- 1 boinc boinc 7884 Sep 26 22:21 heartbeat.json [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 6167 Sep 26 20:56 init_data.xml [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 356659 Sep 26 20:56 input.tar.gz [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 112 Sep 26 20:56 job.xml [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1022 Sep 26 22:21 memory_monitor_summary.json [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1549765 Sep 26 22:21 output.1.b1fdc7cf-2d9f-46e2-a4a9-93b19b9a3e08_86046.pool.root [2021-09-26 22:22:16] -rw------- 1 boinc boinc 536 Sep 26 22:21 output.list [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 2599 Sep 26 20:56 pandaJob.out [2021-09-26 22:22:16] drwxrwx--- 3 boinc boinc 4096 Sep 26 22:21 PanDA_Pilot-5202789498/ [2021-09-26 22:22:16] drwx------ 4 boinc boinc 4096 Sep 26 21:02 pilot2/ [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 346717 Sep 23 07:39 pilot2.tar.gz [2021-09-26 22:22:16] -rw------- 1 boinc boinc 416303 Sep 26 22:21 pilotlog.txt [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 3214 Sep 26 20:30 queuedata.json [2021-09-26 22:22:16] -rwxr-xr-x 1 boinc boinc 6966 Sep 26 20:56 run_atlas* [2021-09-26 22:22:16] -rwx------ 1 boinc boinc 20631 Sep 26 20:30 runpilot2-wrapper.sh* [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 407 Sep 26 20:56 runtime_log [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 5579 Sep 26 20:56 runtime_log.err [2021-09-26 22:22:16] drwxrwx--x 2 boinc boinc 4096 Sep 26 20:56 shared/ [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 16569 Sep 26 20:56 start_atlas.sh [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 2262 Sep 26 20:56 stderr.txt [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 107 Sep 26 20:56 wrapper_26015_x86_64-pc-linux-gnu [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 25 Sep 26 22:21 wrapper_checkpoint.txt [2021-09-26 22:22:16] 2021-09-27 02:21:51,069 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,069 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,069 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,070 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,070 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,070 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,070 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,070 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,070 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,070 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,070 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,071 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,071 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,071 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,071 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,071 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,071 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,071 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-09-26 22:22:16] 2021-09-27 02:21:51,072 | INFO | pilot.control.job | has_job_completed | job 5202789498 has completed (purged errors) [2021-09-26 22:22:16] 2021-09-27 02:21:51,072 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-09-26 22:22:16] 2021-09-27 02:21:51,079 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/11/PanDA_Pilot-5202789498 [2021-09-26 22:22:16] 2021-09-27 02:21:52,081 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [64963] [2021-09-26 22:22:16] 2021-09-27 02:21:52,081 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 64963 [2021-09-26 22:22:16] 2021-09-27 02:21:52,081 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-09-26 22:22:16] 2021-09-27 02:21:53,089 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-09-26 22:22:16] 2021-09-27 02:21:53,089 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=64963 [2021-09-26 22:22:16] 2021-09-27 02:21:53,997 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [64963] (in reverse order) [2021-09-26 22:22:16] 2021-09-27 02:21:54,536 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-09-26 22:22:16] 2021-09-27 02:21:54,549 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-09-26 22:22:16] 2021-09-27 02:21:54,549 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-09-26 22:22:16] 2021-09-27 02:21:54,549 | INFO | pilot.control.job | retrieve | ready for new job [2021-09-26 22:22:16] 2021-09-27 02:21:54,549 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-09-26 22:22:16] 2021-09-27 02:21:54,551 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-09-26 22:22:16] 2021-09-27 02:21:54,551 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.6 (1) *** [2021-09-26 22:22:16] 2021-09-27 02:21:54,551 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-09-26 22:22:16] 2021-09-27 02:21:54,551 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-09-26 22:22:16] 2021-09-27 02:21:54,572 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-09-26 22:22:16] 2021-09-27 02:21:58,149 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-09-26 22:22:16] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-09-26 22:22:16] Distributor ID: CentOS [2021-09-26 22:22:16] Description: CentOS Linux release 7.8.2003 (Core) [2021-09-26 22:22:16] Release: 7.8.2003 [2021-09-26 22:22:16] Codename: Core [2021-09-26 22:22:16] 2021-09-27 02:21:58,149 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-09-26 22:22:16] 2021-09-27 02:21:58,652 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/11 [2021-09-26 22:22:16] 2021-09-27 02:21:59,253 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (38546702336 B) [2021-09-26 22:22:16] 2021-09-27 02:21:59,254 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-09-26 22:22:16] 2021-09-27 02:21:59,254 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:21:59,254 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-09-26 22:22:16] 2021-09-27 02:21:59,255 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-09-26 22:22:16] 2021-09-27 02:21:59,255 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-09-26 22:22:16] 2021-09-27 02:21:59,433 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:21:59,433 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-09-26 22:22:16] 2021-09-27 02:21:59,447 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-09-26 22:22:16] 2021-09-27 02:21:59,449 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:21:59,450 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-09-26 22:22:16] 2021-09-27 02:21:59,641 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-09-26 22:22:16] 2021-09-27 02:21:59,653 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-09-26 22:22:16] 2021-09-27 02:21:59,653 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:21:59,653 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-09-26 22:22:16] 2021-09-27 02:21:59,681 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:21:59,681 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-09-26 22:22:16] 2021-09-27 02:21:59,717 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-09-26 22:22:16] 2021-09-27 02:21:59,717 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:21:59,718 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:00,045 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-09-26 22:22:16] 2021-09-27 02:22:00,425 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-09-26 22:22:16] 2021-09-27 02:22:00,425 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:22:00,425 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:00,653 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:22:00,653 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:00,661 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:22:00,661 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:00,665 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:22:00,669 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:00,673 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:22:00,673 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:00,681 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:22:00,681 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:00,729 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:22:00,733 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:03,054 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-09-26 22:22:16] 2021-09-27 02:22:03,055 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:10,109 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 82 s) [2021-09-26 22:22:16] 2021-09-27 02:22:10,131 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-09-26 22:22:16] 2021-09-27 02:22:10,131 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-09-26 22:22:16] 2021-09-27 02:22:10,132 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-09-26 22:22:16] 2021-09-27 02:22:10,281 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-09-26 22:22:16] 2021-09-27 02:22:10,282 | INFO | root | wrap_up | traces error code: 0 [2021-09-26 22:22:16] 2021-09-27 02:22:10,282 | INFO | root | wrap_up | pilot has finished [2021-09-26 22:22:16] 2021-09-27 02:22:10,617 [wrapper] ==== pilot stdout END ==== [2021-09-26 22:22:16] 2021-09-27 02:22:10,941 [wrapper] ==== wrapper stdout RESUME ==== [2021-09-26 22:22:16] 2021-09-27 02:22:11,076 [wrapper] Pilot exit status: 0 [2021-09-26 22:22:16] 2021-09-27 02:22:11,932 [wrapper] pandaids: 5202789498 [2021-09-26 22:22:16] 2021-09-27 02:22:12,429 [wrapper] apfmon messages muted [2021-09-26 22:22:16] 2021-09-27 02:22:12,640 [wrapper] Test setup, not cleaning [2021-09-26 22:22:16] 2021-09-27 02:22:12,969 [wrapper] ==== wrapper stdout END ==== [2021-09-26 22:22:16] 2021-09-27 02:22:13,217 [wrapper] ==== wrapper stderr END ==== [2021-09-26 22:22:16] 2021-09-27 02:22:13,874 [wrapper] wrapperexiting ec=0, duration=5138 [2021-09-26 22:22:16] 2021-09-27 02:22:14,099 [wrapper] apfmon messages muted [2021-09-26 22:22:16] *** Error codes and diagnostics *** [2021-09-26 22:22:16] "exeErrorCode": 0, [2021-09-26 22:22:16] "exeErrorDiag": "", [2021-09-26 22:22:16] "pilotErrorCode": 0, [2021-09-26 22:22:16] "pilotErrorDiag": "", [2021-09-26 22:22:16] *** Listing of results directory *** [2021-09-26 22:22:16] total 45044 [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 346717 Sep 23 07:39 pilot2.tar.gz [2021-09-26 22:22:16] -rwx------ 1 boinc boinc 20631 Sep 26 20:30 runpilot2-wrapper.sh [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 3214 Sep 26 20:30 queuedata.json [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 107 Sep 26 20:56 wrapper_26015_x86_64-pc-linux-gnu [2021-09-26 22:22:16] -rwxr-xr-x 1 boinc boinc 6966 Sep 26 20:56 run_atlas [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 112 Sep 26 20:56 job.xml [2021-09-26 22:22:16] drwxrwx--x 2 boinc boinc 4096 Sep 26 20:56 shared [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 6167 Sep 26 20:56 init_data.xml [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 0 Sep 26 20:56 boinc_lockfile [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 37224345 Sep 26 20:56 EVNT.04972714._000026.pool.root.1 [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 16569 Sep 26 20:56 start_atlas.sh [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 356659 Sep 26 20:56 input.tar.gz [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 2599 Sep 26 20:56 pandaJob.out [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1082288 Sep 26 21:02 agis_schedconf.cvmfs.json [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1944996 Sep 26 21:02 cric_ddmendpoints.json [2021-09-26 22:22:16] drwx------ 4 boinc boinc 4096 Sep 26 21:02 pilot2 [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 534 Sep 26 22:09 boinc_task_state.xml [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1549765 Sep 26 22:21 output.1.b1fdc7cf-2d9f-46e2-a4a9-93b19b9a3e08_86046.pool.root [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1022 Sep 26 22:21 memory_monitor_summary.json [2021-09-26 22:22:16] -rw------- 1 boinc boinc 474152 Sep 26 22:21 b1fdc7cf-2d9f-46e2-a4a9-93b19b9a3e08_86046.1.job.log.tgz [2021-09-26 22:22:16] -rw------- 1 boinc boinc 7884 Sep 26 22:21 heartbeat.json [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 8192 Sep 26 22:22 boinc_mmap_file [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 25 Sep 26 22:22 wrapper_checkpoint.txt [2021-09-26 22:22:16] -rw------- 1 boinc boinc 7518 Sep 26 22:22 pilotlog.txt [2021-09-26 22:22:16] -rw------- 1 boinc boinc 450286 Sep 26 22:22 b1fdc7cf-2d9f-46e2-a4a9-93b19b9a3e08_86046.1.job.log [2021-09-26 22:22:16] -rw------- 1 boinc boinc 536 Sep 26 22:22 output.list [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 748 Sep 26 22:22 runtime_log [2021-09-26 22:22:16] -rw------- 1 boinc boinc 2498560 Sep 26 22:22 result.tar.gz [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 9565 Sep 26 22:22 runtime_log.err [2021-09-26 22:22:16] -rw------- 1 boinc boinc 566 Sep 26 22:22 gVVMDmOitozn7Olcko1bjSoqABFKDmABFKDmZr2WDm2MFKDm5EZSbm.diag [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 29741 Sep 26 22:22 stderr.txt [2021-09-26 22:22:16] HITS file was successfully produced: [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1549765 Sep 26 22:21 shared/HITS.pool.root.1 [2021-09-26 22:22:16] *** Contents of shared directory: *** [2021-09-26 22:22:16] total 40680 [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 16569 Sep 26 20:56 start_atlas.sh [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 356659 Sep 26 20:56 input.tar.gz [2021-09-26 22:22:16] -rw-r--r-- 1 boinc boinc 37224345 Sep 26 20:56 ATLAS.root_0 [2021-09-26 22:22:16] -rw------- 1 boinc boinc 1549765 Sep 26 22:21 HITS.pool.root.1 [2021-09-26 22:22:16] -rw------- 1 boinc boinc 2498560 Sep 26 22:22 result.tar.gz 22:22:17 (41839): run_atlas exited; CPU time 1286.123279 22:22:17 (41839): called boinc_finish(0) </stderr_txt> ]]>
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