Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
03:39:55 (148921): wrapper (7.7.26015): starting
03:39:55 (148921): wrapper: running run_atlas (--nthreads 2)
[2021-09-27 03:39:55] Arguments: --nthreads 2
[2021-09-27 03:39:55] Threads: 2
[2021-09-27 03:39:55] Checking for CVMFS
[2021-09-27 03:39:56] Probing /cvmfs/atlas.cern.ch... OK
[2021-09-27 03:39:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-09-27 03:39:57] Running cvmfs_config stat atlas.cern.ch
[2021-09-27 03:39:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-09-27 03:39:58] 2.9.0.0 147949 8978 69868 92903 3 119 3968741 4194305 7049 130560 0 78219794 99.993 628892 866 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-09-27 03:39:58] CVMFS is ok
[2021-09-27 03:39:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-09-27 03:39:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-09-27 03:39:58] Small home clusters do not require a local http proxy but it is suggested if
[2021-09-27 03:39:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-09-27 03:39:58] Further information can be found at the LHC@home message board.
[2021-09-27 03:39:58] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-09-27 03:39:58] Checking for singularity binary...
[2021-09-27 03:39:58] Using singularity found in PATH at /usr/local/bin/singularity
[2021-09-27 03:39:58] Running /usr/local/bin/singularity --version
[2021-09-27 03:39:58] singularity version 3.7.2+10-ga969f0f8c
[2021-09-27 03:39:58] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-09-27 03:40:00] E5-2670
[2021-09-27 03:40:00] Singularity works
[2021-09-27 03:40:00] Set ATHENA_PROC_NUMBER=2
[2021-09-27 03:40:00] Starting ATLAS job with PandaID=5203158717
[2021-09-27 03:40:00] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/5 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-09-27 04:23:43]  *** The last 200 lines of the pilot log: ***
[2021-09-27 04:23:43] 2021-09-27 08:22:41,508 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-27 04:23:43] 2021-09-27 08:22:41,508 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-09-27 04:23:43]  activity=['pw', 'w', 'default']
[2021-09-27 04:23:43]  allow_lan=True
[2021-09-27 04:23:43]  allow_wan=False
[2021-09-27 04:23:43]  checksum={'adler32': 'b69cc84a'}
[2021-09-27 04:23:43]  dataset=hc_test.gangarbt.hc20216215.tid1109.BOINC-TEST.101
[2021-09-27 04:23:43]  ddm_activity=<filter object at 0x7ff8d4771450>
[2021-09-27 04:23:43]  ddmendpoint=NDGF-T1_DATADISK
[2021-09-27 04:23:43]  direct_access_lan=False
[2021-09-27 04:23:43]  direct_access_wan=False
[2021-09-27 04:23:43]  domain=
[2021-09-27 04:23:43]  filesize=1659487
[2021-09-27 04:23:43]  filetype=output
[2021-09-27 04:23:43]  guid=F0ABECF1-471A-B84E-8D66-5A021350125D
[2021-09-27 04:23:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-27 04:23:43]  is_tar=False
[2021-09-27 04:23:43]  lfn=Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.root
[2021-09-27 04:23:43]  mtime=0
[2021-09-27 04:23:43]  protocol_id=None
[2021-09-27 04:23:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-27 04:23:43]  replicas=None
[2021-09-27 04:23:43]  scope=hc_test
[2021-09-27 04:23:43]  status=None
[2021-09-27 04:23:43]  status_code=0
[2021-09-27 04:23:43]  storage_token=
[2021-09-27 04:23:43]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.root
[2021-09-27 04:23:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/d1/0e/Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.root
[2021-09-27 04:23:43]  workdir=None
[2021-09-27 04:23:43] ]
[2021-09-27 04:23:43] 2021-09-27 08:22:41,845 | INFO     | transferring file Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.root from /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/H
[2021-09-27 04:23:43] 2021-09-27 08:22:41,849 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS
[2021-09-27 04:23:43] 2021-09-27 08:22:42,331 | INFO     | Adding to output.list: Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDAT
[2021-09-27 04:23:43] 2021-09-27 08:22:42,332 | INFO     | executing command: ps aux -q 1555
[2021-09-27 04:23:43] 2021-09-27 08:22:43,002 | INFO     | summary of transferred files:
[2021-09-27 04:23:43] 2021-09-27 08:22:43,002 | INFO     |  -- lfn=Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.root, status_code=0, status=transferred
[2021-09-27 04:23:43] 2021-09-27 08:22:43,003 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717
[2021-09-27 04:23:43] 2021-09-27 08:22:43,449 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.r
[2021-09-27 04:23:43] 2021-09-27 08:22:43,455 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.r
[2021-09-27 04:23:43] 2021-09-27 08:22:43,456 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717
[2021-09-27 04:23:43] 2021-09-27 08:22:44,025 | INFO     | will create archive /var/lib/boinc-client/slots/5/tarball_PandaJob_5203158717_BOINC-TEST/a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz
[2021-09-27 04:23:43] 2021-09-27 08:22:44,025 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/5/tarball_PandaJob_5203158717_BOINC-TEST/a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz tarball
[2021-09-27 04:23:43] 2021-09-27 08:22:44,981 | INFO     | prepare to stage-out 1 log file(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:44,990 | INFO     | stage-out will not be done in a container
[2021-09-27 04:23:43] 2021-09-27 08:22:44,991 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2021-09-27 04:23:43] 2021-09-27 08:22:44,991 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2021-09-27 04:23:43] 2021-09-27 08:22:44,991 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2021-09-27 04:23:43] 2021-09-27 08:22:44,992 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2021-09-27 04:23:43] 2021-09-27 08:22:45,527 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-27 04:23:43] 2021-09-27 08:22:45,527 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-09-27 04:23:43]  activity=['pl', 'pw', 'w', 'default']
[2021-09-27 04:23:43]  allow_lan=True
[2021-09-27 04:23:43]  allow_wan=False
[2021-09-27 04:23:43]  checksum={'adler32': '81213de3'}
[2021-09-27 04:23:43]  dataset=hc_test.gangarbt.hc20216215.tid1109.BOINC-TEST.101
[2021-09-27 04:23:43]  ddm_activity=<filter object at 0x7ff8f12ee310>
[2021-09-27 04:23:43]  ddmendpoint=NDGF-T1_DATADISK
[2021-09-27 04:23:43]  direct_access_lan=False
[2021-09-27 04:23:43]  direct_access_wan=False
[2021-09-27 04:23:43]  domain=
[2021-09-27 04:23:43]  filesize=541508
[2021-09-27 04:23:43]  filetype=log
[2021-09-27 04:23:43]  guid=26c83d1a-124d-49a3-b356-1510d89340ec
[2021-09-27 04:23:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-27 04:23:43]  is_tar=False
[2021-09-27 04:23:43]  lfn=a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz
[2021-09-27 04:23:43]  mtime=0
[2021-09-27 04:23:43]  protocol_id=None
[2021-09-27 04:23:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-27 04:23:43]  replicas=None
[2021-09-27 04:23:43]  scope=hc_test
[2021-09-27 04:23:43]  status=None
[2021-09-27 04:23:43]  status_code=0
[2021-09-27 04:23:43]  storage_token=
[2021-09-27 04:23:43]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz
[2021-09-27 04:23:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/f9/6c/a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz
[2021-09-27 04:23:43]  workdir=None
[2021-09-27 04:23:43] ]
[2021-09-27 04:23:43] 2021-09-27 08:22:45,788 | INFO     | transferring file a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz from /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/a25fd552-30e7-4899-bf01-bd18fd05
[2021-09-27 04:23:43] 2021-09-27 08:22:45,801 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz /var/lib/boinc-clien
[2021-09-27 04:23:43] 2021-09-27 08:22:46,322 | INFO     | Adding to output.list: a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadisk/
[2021-09-27 04:23:43] 2021-09-27 08:22:46,323 | INFO     | executing command: ps aux -q 1555
[2021-09-27 04:23:43] 2021-09-27 08:22:46,915 | INFO     | summary of transferred files:
[2021-09-27 04:23:43] 2021-09-27 08:22:46,915 | INFO     |  -- lfn=a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz, status_code=0, status=transferred
[2021-09-27 04:23:43] 2021-09-27 08:22:46,915 | INFO     | stage-out finished correctly
[2021-09-27 04:23:43] 2021-09-27 08:22:48,221 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2021-09-27 04:23:43] 2021-09-27 08:22:49,773 | INFO     | job 5203158717 has state=finished
[2021-09-27 04:23:43] 2021-09-27 08:22:49,773 | INFO     | preparing for final server update for job 5203158717 in state='finished'
[2021-09-27 04:23:43] 2021-09-27 08:22:49,781 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2021-09-27 04:23:43] 2021-09-27 08:22:49,781 | INFO     | job 5203158717 has finished - writing final server update
[2021-09-27 04:23:43] 2021-09-27 08:22:49,782 | INFO     | will not add max space = -34404029 B to job metrics
[2021-09-27 04:23:43] 2021-09-27 08:22:49,783 | INFO     | fitting pss+swap vs Time
[2021-09-27 04:23:43] 2021-09-27 08:22:49,783 | INFO     | current memory leak: -3.99 B/s (using 24 data points, chi2=14313939)
[2021-09-27 04:23:43] 2021-09-27 08:22:49,784 | INFO     | mean actualcorecount: 4.038462
[2021-09-27 04:23:43] 2021-09-27 08:22:49,784 | INFO     | total number of processed events: 2 (read)
[2021-09-27 04:23:43] 2021-09-27 08:22:49,802 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-09-27 04:23:43] 2021-09-27 08:22:50,354 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-5203158717/memory_monitor_summary.json (trf name=prmon)
[2021-09-27 04:23:43] 2021-09-27 08:22:50,356 | INFO     | extracted standard info from prmon json
[2021-09-27 04:23:43] 2021-09-27 08:22:50,356 | INFO     | extracted standard memory fields from prmon json
[2021-09-27 04:23:43] 2021-09-27 08:22:50,356 | INFO     | ..............................
[2021-09-27 04:23:43] 2021-09-27 08:22:50,356 | INFO     | . Timing measurements:
[2021-09-27 04:23:43] 2021-09-27 08:22:50,356 | INFO     | . get job = 0 s
[2021-09-27 04:23:43] 2021-09-27 08:22:50,356 | INFO     | . initial setup = 4 s
[2021-09-27 04:23:43] 2021-09-27 08:22:50,361 | INFO     | . payload setup = 171 s
[2021-09-27 04:23:43] 2021-09-27 08:22:50,361 | INFO     | . total setup = 175 s
[2021-09-27 04:23:43] 2021-09-27 08:22:50,361 | INFO     | . stage-in = 2 s
[2021-09-27 04:23:43] 2021-09-27 08:22:50,361 | INFO     | . payload execution = 2039 s
[2021-09-27 04:23:43] 2021-09-27 08:22:50,361 | INFO     | . stage-out = 6 s
[2021-09-27 04:23:43] 2021-09-27 08:22:50,361 | INFO     | ..............................
[2021-09-27 04:23:43] 2021-09-27 08:22:50,824 | INFO     | 
[2021-09-27 04:23:43] 2021-09-27 08:22:50,829 | INFO     | job summary report
[2021-09-27 04:23:43] 2021-09-27 08:22:50,829 | INFO     | --------------------------------------------------
[2021-09-27 04:23:43] 2021-09-27 08:22:50,829 | INFO     | PanDA job id: 5203158717
[2021-09-27 04:23:43] 2021-09-27 08:22:50,829 | INFO     | task id: NULL
[2021-09-27 04:23:43] 2021-09-27 08:22:50,830 | INFO     | errors: (none)
[2021-09-27 04:23:43] 2021-09-27 08:22:50,830 | INFO     | status: LOG_TRANSFER = DONE 
[2021-09-27 04:23:43] 2021-09-27 08:22:50,830 | INFO     | pilot state: finished 
[2021-09-27 04:23:43] 2021-09-27 08:22:50,830 | INFO     | transexitcode: 0
[2021-09-27 04:23:43] 2021-09-27 08:22:50,830 | INFO     | exeerrorcode: 0
[2021-09-27 04:23:43] 2021-09-27 08:22:50,830 | INFO     | exeerrordiag: 
[2021-09-27 04:23:43] 2021-09-27 08:22:50,830 | INFO     | exitcode: 0
[2021-09-27 04:23:43] 2021-09-27 08:22:50,831 | INFO     | exitmsg: OK
[2021-09-27 04:23:43] 2021-09-27 08:22:50,831 | INFO     | cpuconsumptiontime: 562 s
[2021-09-27 04:23:43] 2021-09-27 08:22:50,831 | INFO     | nevents: 2
[2021-09-27 04:23:43] 2021-09-27 08:22:50,831 | INFO     | neventsw: 0
[2021-09-27 04:23:43] 2021-09-27 08:22:50,831 | INFO     | pid: 5761
[2021-09-27 04:23:43] 2021-09-27 08:22:50,831 | INFO     | pgrp: 5761
[2021-09-27 04:23:43] 2021-09-27 08:22:50,831 | INFO     | corecount: 2
[2021-09-27 04:23:43] 2021-09-27 08:22:50,832 | INFO     | event service: False
[2021-09-27 04:23:43] 2021-09-27 08:22:50,832 | INFO     | sizes: {18121950: 3887998, 18121951: 3888110, 18121953: 3888215, 18121955: 3888275, 18121964: 3888331, 18124180: 3915389, 18124187: 3924901, 18124189: 3924957, 181
[2021-09-27 04:23:43] 2021-09-27 08:22:50,832 | INFO     | --------------------------------------------------
[2021-09-27 04:23:43] 2021-09-27 08:22:50,832 | INFO     | 
[2021-09-27 04:23:43] 2021-09-27 08:22:50,832 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2021-09-27 04:23:43] 2021-09-27 08:22:51,189 | INFO     | queue jobs has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,189 | INFO     | queue payloads has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,190 | INFO     | queue data_in has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,190 | INFO     | queue data_out has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,190 | INFO     | queue current_data_in has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,190 | INFO     | queue validated_jobs has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,190 | INFO     | queue validated_payloads has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,190 | INFO     | queue monitored_payloads has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,190 | INFO     | queue finished_jobs has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,191 | INFO     | queue finished_payloads has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,191 | INFO     | queue finished_data_in has 1 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,191 | INFO     | queue finished_data_out has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,191 | INFO     | queue failed_jobs has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,191 | INFO     | queue failed_payloads has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,191 | INFO     | queue failed_data_in has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,191 | INFO     | queue failed_data_out has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,191 | INFO     | queue completed_jobs has 0 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,192 | INFO     | queue completed_jobids has 1 job(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,192 | INFO     | job 5203158717 has completed (purged errors)
[2021-09-27 04:23:43] 2021-09-27 08:22:51,192 | INFO     | overall cleanup function is called
[2021-09-27 04:23:43] 2021-09-27 08:22:52,209 | INFO     | --- collectZombieJob: --- 10, [5761]
[2021-09-27 04:23:43] 2021-09-27 08:22:52,209 | INFO     | zombie collector trying to kill pid 5761
[2021-09-27 04:23:43] 2021-09-27 08:22:52,209 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-09-27 04:23:43] 2021-09-27 08:22:53,213 | INFO     | collected zombie processes
[2021-09-27 04:23:43] 2021-09-27 08:22:53,213 | INFO     | will now attempt to kill all subprocesses of pid=5761
[2021-09-27 04:23:43] 2021-09-27 08:22:54,069 | INFO     | process IDs to be killed: [5761] (in reverse order)
[2021-09-27 04:23:43] 2021-09-27 08:22:55,239 | WARNING  | found no corresponding commands to process id(s)
[2021-09-27 04:23:43] 2021-09-27 08:22:55,239 | INFO     | Do not look for orphan processes in BOINC jobs
[2021-09-27 04:23:43] 2021-09-27 08:22:55,239 | INFO     | ready for new job
[2021-09-27 04:23:43] 2021-09-27 08:22:55,240 | INFO     | pilot has finished for previous job - re-establishing logging
[2021-09-27 04:23:43] 2021-09-27 08:22:55,245 | INFO     | ****************************************
[2021-09-27 04:23:43] 2021-09-27 08:22:55,245 | INFO     | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-09-27 04:23:43] 2021-09-27 08:22:55,245 | INFO     | ****************************************
[2021-09-27 04:23:43] 2021-09-27 08:22:55,245 | INFO     | 
[2021-09-27 04:23:43] 2021-09-27 08:22:55,266 | INFO     | architecture information:
[2021-09-27 04:23:43] 2021-09-27 08:22:58,352 | INFO     | 
[2021-09-27 04:23:43] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-09-27 04:23:43] Distributor ID:	CentOS
[2021-09-27 04:23:43] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-09-27 04:23:43] Release:	7.8.2003
[2021-09-27 04:23:43] Codename:	Core
[2021-09-27 04:23:43] 2021-09-27 08:22:58,352 | INFO     | ****************************************
[2021-09-27 04:23:43] 2021-09-27 08:22:59,242 | INFO     | sufficient remaining disk space (39188430848 B)
[2021-09-27 04:23:43] 2021-09-27 08:22:59,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2021-09-27 04:23:43] 2021-09-27 08:22:59,245 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-09-27 04:23:43] 2021-09-27 08:22:59,249 | WARNING  | aborting monitor loop since graceful_stop has been set
[2021-09-27 04:23:43] 2021-09-27 08:22:59,249 | INFO     | [monitor] control thread has ended
[2021-09-27 04:23:43] 2021-09-27 08:22:59,457 | INFO     | [payload] execute_payloads thread has finished
[2021-09-27 04:23:43] 2021-09-27 08:22:59,733 | INFO     | [payload] validate_post thread has finished
[2021-09-27 04:23:43] 2021-09-27 08:22:59,857 | INFO     | [payload] validate_pre thread has finished
[2021-09-27 04:23:43] 2021-09-27 08:22:59,869 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2021-09-27 04:23:43] 2021-09-27 08:23:00,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2021-09-27 04:23:43] 2021-09-27 08:23:00,758 | INFO     | [payload] failed_post thread has finished
[2021-09-27 04:23:43] 2021-09-27 08:23:39,217 | WARNING  | no jobs in monitored_payloads queue (waited for 78 s)
[2021-09-27 04:23:43] 2021-09-27 08:23:40,061 | INFO     | end of generic workflow (traces error code: 0)
[2021-09-27 04:23:43] 2021-09-27 08:23:40,061 | INFO     | traces error code: 0
[2021-09-27 04:23:43] 2021-09-27 08:23:40,061 | INFO     | pilot has finished
[2021-09-27 04:23:43] 2021-09-27 08:23:40,306 [wrapper] ==== pilot stdout END ====
[2021-09-27 04:23:43] 2021-09-27 08:23:40,444 [wrapper] ==== wrapper stdout RESUME ====
[2021-09-27 04:23:43] 2021-09-27 08:23:40,625 [wrapper] Pilot exit status: 0
[2021-09-27 04:23:43] 2021-09-27 08:23:41,117 [wrapper] pandaids: 5203158717
[2021-09-27 04:23:43] 2021-09-27 08:23:41,469 [wrapper] apfmon messages muted
[2021-09-27 04:23:43] 2021-09-27 08:23:41,628 [wrapper] Test setup, not cleaning
[2021-09-27 04:23:43] 2021-09-27 08:23:41,785 [wrapper] ==== wrapper stdout END ====
[2021-09-27 04:23:43] 2021-09-27 08:23:41,932 [wrapper] ==== wrapper stderr END ====
[2021-09-27 04:23:43] 2021-09-27 08:23:42,151 [wrapper] wrapperexiting ec=0, duration=2617
[2021-09-27 04:23:43] 2021-09-27 08:23:42,313 [wrapper] apfmon messages muted
[2021-09-27 04:23:43]  *** Error codes and diagnostics ***
[2021-09-27 04:23:43]     "exeErrorCode": 0,
[2021-09-27 04:23:43]     "exeErrorDiag": "",
[2021-09-27 04:23:43]     "pilotErrorCode": 0,
[2021-09-27 04:23:43]     "pilotErrorDiag": "",
[2021-09-27 04:23:43]  *** Listing of results directory ***
[2021-09-27 04:23:43] total 44832
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc   344681 Sep 27 02:29 pilot2.tar.gz
[2021-09-27 04:23:43] -rwx------ 1 boinc boinc    20816 Sep 27 02:37 runpilot2-wrapper.sh
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc     3214 Sep 27 02:37 queuedata.json
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc      107 Sep 27 03:39 wrapper_26015_x86_64-pc-linux-gnu
[2021-09-27 04:23:43] -rwxr-xr-x 1 boinc boinc     6966 Sep 27 03:39 run_atlas
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc      112 Sep 27 03:39 job.xml
[2021-09-27 04:23:43] drwxrwx--x 2 boinc boinc     4096 Sep 27 03:39 shared
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc     6167 Sep 27 03:39 init_data.xml
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc        0 Sep 27 03:39 boinc_lockfile
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc    16533 Sep 27 03:40 start_atlas.sh
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc   354544 Sep 27 03:40 input.tar.gz
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc 38971704 Sep 27 03:40 EVNT.04972714._000035.pool.root.1
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc     2661 Sep 27 03:40 pandaJob.out
[2021-09-27 04:23:43] -rw------- 1 boinc boinc  1080101 Sep 27 03:45 agis_schedconf.cvmfs.json
[2021-09-27 04:23:43] -rw------- 1 boinc boinc  1944996 Sep 27 03:45 cric_ddmendpoints.json
[2021-09-27 04:23:43] drwx------ 4 boinc boinc     4096 Sep 27 03:45 pilot2
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc      534 Sep 27 04:11 boinc_task_state.xml
[2021-09-27 04:23:43] -rw------- 1 boinc boinc  1659487 Sep 27 04:22 Hits.hc_20216215.BOINC-TEST.a25fd552-30e7-4899-bf01-bd18fd05a897_87845.HITS.pool.root
[2021-09-27 04:23:43] -rw------- 1 boinc boinc     1020 Sep 27 04:22 memory_monitor_summary.json
[2021-09-27 04:23:43] -rw------- 1 boinc boinc   541508 Sep 27 04:22 a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log.tgz
[2021-09-27 04:23:43] -rw------- 1 boinc boinc     8447 Sep 27 04:22 heartbeat.json
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc     8192 Sep 27 04:23 boinc_mmap_file
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc       25 Sep 27 04:23 wrapper_checkpoint.txt
[2021-09-27 04:23:43] -rw------- 1 boinc boinc     1893 Sep 27 04:23 pilotlog.txt
[2021-09-27 04:23:43] -rw------- 1 boinc boinc   127952 Sep 27 04:23 a25fd552-30e7-4899-bf01-bd18fd05a897_87845.job.log
[2021-09-27 04:23:43] -rw------- 1 boinc boinc      582 Sep 27 04:23 output.list
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc      680 Sep 27 04:23 runtime_log
[2021-09-27 04:23:43] -rw------- 1 boinc boinc   686080 Sep 27 04:23 result.tar.gz
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc     9216 Sep 27 04:23 runtime_log.err
[2021-09-27 04:23:43] -rw------- 1 boinc boinc      563 Sep 27 04:23 lx3KDmQRzozn7Olcko1bjSoqABFKDmABFKDmZr2WDmFNFKDmwEYZMn.diag
[2021-09-27 04:23:43] -rw-r--r-- 1 boinc boinc    21547 Sep 27 04:23 stderr.txt
[2021-09-27 04:23:44] HITS file was successfully produced:
[2021-09-27 04:23:44] -rw------- 1 boinc boinc 1659487 Sep 27 04:22 shared/HITS.pool.root.1
[2021-09-27 04:23:44]  *** Contents of shared directory: ***
[2021-09-27 04:23:44] total 40728
[2021-09-27 04:23:44] -rw-r--r-- 1 boinc boinc    16533 Sep 27 03:39 start_atlas.sh
[2021-09-27 04:23:44] -rw-r--r-- 1 boinc boinc   354544 Sep 27 03:39 input.tar.gz
[2021-09-27 04:23:44] -rw-r--r-- 1 boinc boinc 38971704 Sep 27 03:39 ATLAS.root_0
[2021-09-27 04:23:44] -rw------- 1 boinc boinc  1659487 Sep 27 04:22 HITS.pool.root.1
[2021-09-27 04:23:44] -rw------- 1 boinc boinc   686080 Sep 27 04:23 result.tar.gz
04:23:45 (148921): run_atlas exited; CPU time 444.633977
04:23:45 (148921): called boinc_finish(0)

</stderr_txt>
]]>

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