| Name | KCNODmw63ozn7Olcko1bjSoqABFKDmABFKDmZr2WDmKNFKDmC4s43n_0 |
| Workunit | 2131534 |
| Created | 27 Sep 2021, 11:36:32 UTC |
| Sent | 27 Sep 2021, 12:12:40 UTC |
| Report deadline | 4 Oct 2021, 12:12:40 UTC |
| Received | 27 Sep 2021, 13:53:15 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4357 |
| Run time | 1 hours 39 min 54 sec |
| CPU time | 35 min 20 sec |
| Validate state | Valid |
| Credit | 41.90 |
| Device peak FLOPS | 6.11 GFLOPS |
| Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.39 GB |
| Peak swap size | 27.53 GB |
| Peak disk usage | 82.49 MB |
Stderr output
<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
08:13:09 (74324): wrapper (7.7.26015): starting
08:13:09 (74324): wrapper: running run_atlas (--nthreads 2)
[2021-09-27 08:13:09] Arguments: --nthreads 2
[2021-09-27 08:13:09] Threads: 2
[2021-09-27 08:13:09] Checking for CVMFS
[2021-09-27 08:13:10] Probing /cvmfs/atlas.cern.ch... OK
[2021-09-27 08:13:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-09-27 08:13:12] Running cvmfs_config stat atlas.cern.ch
[2021-09-27 08:13:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-09-27 08:13:14] 2.9.0.0 147949 9251 68692 92913 2 58 3996436 4194305 8273 130560 0 80711857 99.993 635938 855 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-09-27 08:13:14] CVMFS is ok
[2021-09-27 08:13:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-09-27 08:13:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-09-27 08:13:14] Small home clusters do not require a local http proxy but it is suggested if
[2021-09-27 08:13:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-09-27 08:13:14] Further information can be found at the LHC@home message board.
[2021-09-27 08:13:14] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-09-27 08:13:14] Checking for singularity binary...
[2021-09-27 08:13:14] Using singularity found in PATH at /usr/local/bin/singularity
[2021-09-27 08:13:14] Running /usr/local/bin/singularity --version
[2021-09-27 08:13:14] singularity version 3.7.2+10-ga969f0f8c
[2021-09-27 08:13:14] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-09-27 08:13:15] E5-2670
[2021-09-27 08:13:15] Singularity works
[2021-09-27 08:13:16] Set ATHENA_PROC_NUMBER=2
[2021-09-27 08:13:16] Starting ATLAS job with PandaID=5203380234
[2021-09-27 08:13:16] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/11 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-09-27 09:53:00] *** The last 200 lines of the pilot log: ***
[2021-09-27 09:53:00] 2021-09-27 13:51:52,145 | INFO | trying to use copytool=mv for activity=['pw', 'w', 'default']
[2021-09-27 09:53:00] 2021-09-27 13:51:52,612 | INFO | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-27 09:53:00] 2021-09-27 13:51:52,625 | INFO | ready to transfer (stage-out) files: [ accessmode=
[2021-09-27 09:53:00] activity=['pw', 'w', 'default']
[2021-09-27 09:53:00] allow_lan=True
[2021-09-27 09:53:00] allow_wan=False
[2021-09-27 09:53:00] checksum={'adler32': 'f172d14e'}
[2021-09-27 09:53:00] dataset=hc_test.gangarbt.hc20216392.tid957.BOINC-TEST.137
[2021-09-27 09:53:00] ddm_activity=<filter object at 0x7f9b7670f1d0>
[2021-09-27 09:53:00] ddmendpoint=NDGF-T1_DATADISK
[2021-09-27 09:53:00] direct_access_lan=False
[2021-09-27 09:53:00] direct_access_wan=False
[2021-09-27 09:53:00] domain=
[2021-09-27 09:53:00] filesize=2076723
[2021-09-27 09:53:00] filetype=output
[2021-09-27 09:53:00] guid=E7974170-DDAB-0349-9EB3-1DA3A627EF88
[2021-09-27 09:53:00] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-27 09:53:00] is_tar=False
[2021-09-27 09:53:00] lfn=Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.root
[2021-09-27 09:53:00] mtime=0
[2021-09-27 09:53:00] protocol_id=None
[2021-09-27 09:53:00] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-27 09:53:00] replicas=None
[2021-09-27 09:53:00] scope=hc_test
[2021-09-27 09:53:00] status=None
[2021-09-27 09:53:00] status_code=0
[2021-09-27 09:53:00] storage_token=
[2021-09-27 09:53:00] surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.root
[2021-09-27 09:53:00] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/69/2e/Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.root
[2021-09-27 09:53:00] workdir=None
[2021-09-27 09:53:00] ]
[2021-09-27 09:53:00] 2021-09-27 13:51:52,847 | INFO | transferring file Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.root from /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/
[2021-09-27 09:53:00] 2021-09-27 13:51:52,848 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HIT
[2021-09-27 09:53:00] 2021-09-27 13:51:53,518 | INFO | Adding to output.list: Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDAT
[2021-09-27 09:53:00] 2021-09-27 13:51:53,519 | INFO | executing command: ps aux -q 82979
[2021-09-27 09:53:00] 2021-09-27 13:51:54,293 | INFO | summary of transferred files:
[2021-09-27 09:53:00] 2021-09-27 13:51:54,294 | INFO | -- lfn=Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.root, status_code=0, status=transferred
[2021-09-27 09:53:00] 2021-09-27 13:51:54,294 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234
[2021-09-27 09:53:00] 2021-09-27 13:51:54,953 | WARNING | failed to remove directory: /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.
[2021-09-27 09:53:00] 2021-09-27 13:51:54,953 | WARNING | failed to remove directory: /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.
[2021-09-27 09:53:00] 2021-09-27 13:51:54,962 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234
[2021-09-27 09:53:00] 2021-09-27 13:51:55,409 | INFO | will create archive /var/lib/boinc-client/slots/11/tarball_PandaJob_5203380234_BOINC-TEST/8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz
[2021-09-27 09:53:00] 2021-09-27 13:51:55,409 | INFO | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/11/tarball_PandaJob_5203380234_BOINC-TEST/8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz tarbal
[2021-09-27 09:53:00] 2021-09-27 13:51:56,398 | INFO | prepare to stage-out 1 log file(s)
[2021-09-27 09:53:00] 2021-09-27 13:51:56,405 | INFO | stage-out will not be done in a container
[2021-09-27 09:53:00] 2021-09-27 13:51:56,406 | INFO | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2021-09-27 09:53:00] 2021-09-27 13:51:56,406 | INFO | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2021-09-27 09:53:00] 2021-09-27 13:51:56,406 | INFO | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2021-09-27 09:53:00] 2021-09-27 13:51:56,406 | INFO | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2021-09-27 09:53:00] 2021-09-27 13:51:56,921 | INFO | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-27 09:53:00] 2021-09-27 13:51:56,922 | INFO | ready to transfer (stage-out) files: [ accessmode=
[2021-09-27 09:53:00] activity=['pl', 'pw', 'w', 'default']
[2021-09-27 09:53:00] allow_lan=True
[2021-09-27 09:53:00] allow_wan=False
[2021-09-27 09:53:00] checksum={'adler32': '4e9fa527'}
[2021-09-27 09:53:00] dataset=hc_test.gangarbt.hc20216392.tid957.BOINC-TEST.137
[2021-09-27 09:53:00] ddm_activity=<filter object at 0x7f9b788f26d0>
[2021-09-27 09:53:00] ddmendpoint=NDGF-T1_DATADISK
[2021-09-27 09:53:00] direct_access_lan=False
[2021-09-27 09:53:00] direct_access_wan=False
[2021-09-27 09:53:00] domain=
[2021-09-27 09:53:00] filesize=465790
[2021-09-27 09:53:00] filetype=log
[2021-09-27 09:53:00] guid=cc8963ce-31b5-46f6-99e2-77237bb66728
[2021-09-27 09:53:00] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-27 09:53:00] is_tar=False
[2021-09-27 09:53:00] lfn=8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz
[2021-09-27 09:53:00] mtime=0
[2021-09-27 09:53:00] protocol_id=None
[2021-09-27 09:53:00] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-27 09:53:00] replicas=None
[2021-09-27 09:53:00] scope=hc_test
[2021-09-27 09:53:00] status=None
[2021-09-27 09:53:00] status_code=0
[2021-09-27 09:53:00] storage_token=
[2021-09-27 09:53:00] surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz
[2021-09-27 09:53:00] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c8/89/8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz
[2021-09-27 09:53:00] workdir=None
[2021-09-27 09:53:00] ]
[2021-09-27 09:53:00] 2021-09-27 13:51:57,165 | INFO | transferring file 8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz from /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/8b2e41e0-ca62-4f24-ad81-b0908ff
[2021-09-27 09:53:00] 2021-09-27 13:51:57,165 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz /var/lib/boinc-clie
[2021-09-27 09:53:00] 2021-09-27 13:51:57,649 | INFO | Adding to output.list: 8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadisk/
[2021-09-27 09:53:00] 2021-09-27 13:51:57,650 | INFO | executing command: ps aux -q 82979
[2021-09-27 09:53:00] 2021-09-27 13:51:58,187 | INFO | summary of transferred files:
[2021-09-27 09:53:00] 2021-09-27 13:51:58,188 | INFO | -- lfn=8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz, status_code=0, status=transferred
[2021-09-27 09:53:00] 2021-09-27 13:51:58,188 | INFO | stage-out finished correctly
[2021-09-27 09:53:00] 2021-09-27 13:51:58,619 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue
[2021-09-27 09:53:00] 2021-09-27 13:52:01,133 | INFO | job 5203380234 has state=finished
[2021-09-27 09:53:00] 2021-09-27 13:52:01,137 | INFO | preparing for final server update for job 5203380234 in state='finished'
[2021-09-27 09:53:00] 2021-09-27 13:52:01,137 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2021-09-27 09:53:00] 2021-09-27 13:52:01,138 | INFO | job 5203380234 has finished - writing final server update
[2021-09-27 09:53:00] 2021-09-27 13:52:01,138 | INFO | will not add max space = -33030476 B to job metrics
[2021-09-27 09:53:00] 2021-09-27 13:52:01,140 | INFO | fitting pss+swap vs Time
[2021-09-27 09:53:00] 2021-09-27 13:52:01,153 | INFO | current memory leak: 50.08 B/s (using 72 data points, chi2=13681510)
[2021-09-27 09:53:00] 2021-09-27 13:52:01,154 | INFO | mean actualcorecount: 4.491525
[2021-09-27 09:53:00] 2021-09-27 13:52:01,154 | INFO | total number of processed events: 2 (read)
[2021-09-27 09:53:00] 2021-09-27 13:52:01,178 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-09-27 09:53:00] 2021-09-27 13:52:01,871 | INFO | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-5203380234/memory_monitor_summary.json (trf name=prmon)
[2021-09-27 09:53:00] 2021-09-27 13:52:01,877 | INFO | extracted standard info from prmon json
[2021-09-27 09:53:00] 2021-09-27 13:52:01,877 | INFO | extracted standard memory fields from prmon json
[2021-09-27 09:53:00] 2021-09-27 13:52:01,877 | INFO | ..............................
[2021-09-27 09:53:00] 2021-09-27 13:52:01,877 | INFO | . Timing measurements:
[2021-09-27 09:53:00] 2021-09-27 13:52:01,878 | INFO | . get job = 0 s
[2021-09-27 09:53:00] 2021-09-27 13:52:01,878 | INFO | . initial setup = 5 s
[2021-09-27 09:53:00] 2021-09-27 13:52:01,878 | INFO | . payload setup = 342 s
[2021-09-27 09:53:00] 2021-09-27 13:52:01,878 | INFO | . total setup = 347 s
[2021-09-27 09:53:00] 2021-09-27 13:52:01,878 | INFO | . stage-in = 2 s
[2021-09-27 09:53:00] 2021-09-27 13:52:01,878 | INFO | . payload execution = 5123 s
[2021-09-27 09:53:00] 2021-09-27 13:52:01,878 | INFO | . stage-out = 6 s
[2021-09-27 09:53:00] 2021-09-27 13:52:01,878 | INFO | ..............................
[2021-09-27 09:53:00] 2021-09-27 13:52:02,697 | INFO |
[2021-09-27 09:53:00] 2021-09-27 13:52:02,701 | INFO | job summary report
[2021-09-27 09:53:00] 2021-09-27 13:52:02,701 | INFO | --------------------------------------------------
[2021-09-27 09:53:00] 2021-09-27 13:52:02,701 | INFO | PanDA job id: 5203380234
[2021-09-27 09:53:00] 2021-09-27 13:52:02,701 | INFO | task id: NULL
[2021-09-27 09:53:00] 2021-09-27 13:52:02,701 | INFO | errors: (none)
[2021-09-27 09:53:00] 2021-09-27 13:52:02,703 | INFO | status: LOG_TRANSFER = DONE
[2021-09-27 09:53:00] 2021-09-27 13:52:02,704 | INFO | pilot state: finished
[2021-09-27 09:53:00] 2021-09-27 13:52:02,704 | INFO | transexitcode: 0
[2021-09-27 09:53:00] 2021-09-27 13:52:02,704 | INFO | exeerrorcode: 0
[2021-09-27 09:53:00] 2021-09-27 13:52:02,704 | INFO | exeerrordiag:
[2021-09-27 09:53:00] 2021-09-27 13:52:02,704 | INFO | exitcode: 0
[2021-09-27 09:53:00] 2021-09-27 13:52:02,704 | INFO | exitmsg: OK
[2021-09-27 09:53:00] 2021-09-27 13:52:02,704 | INFO | cpuconsumptiontime: 2394 s
[2021-09-27 09:53:00] 2021-09-27 13:52:02,705 | INFO | nevents: 2
[2021-09-27 09:53:00] 2021-09-27 13:52:02,705 | INFO | neventsw: 0
[2021-09-27 09:53:00] 2021-09-27 13:52:02,705 | INFO | pid: 92833
[2021-09-27 09:53:00] 2021-09-27 13:52:02,705 | INFO | pgrp: 92833
[2021-09-27 09:53:00] 2021-09-27 13:52:02,705 | INFO | corecount: 2
[2021-09-27 09:53:00] 2021-09-27 13:52:02,705 | INFO | event service: False
[2021-09-27 09:53:00] 2021-09-27 13:52:02,705 | INFO | sizes: {18138447: 3887993, 18138448: 3888049, 18138449: 3888218, 18138450: 3888218, 18138452: 3888440, 18138460: 3888382, 18143932: 3915003, 18143939: 3924573, 181
[2021-09-27 09:53:00] 2021-09-27 13:52:02,706 | INFO | --------------------------------------------------
[2021-09-27 09:53:00] 2021-09-27 13:52:02,706 | INFO |
[2021-09-27 09:53:00] 2021-09-27 13:52:02,706 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/11
[2021-09-27 09:53:00] 2021-09-27 13:52:03,265 | INFO | queue jobs has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,265 | INFO | queue payloads has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,265 | INFO | queue data_in has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,265 | INFO | queue data_out has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,265 | INFO | queue current_data_in has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,265 | INFO | queue validated_jobs has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,266 | INFO | queue validated_payloads has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,266 | INFO | queue monitored_payloads has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,266 | INFO | queue finished_jobs has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,266 | INFO | queue finished_payloads has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,266 | INFO | queue finished_data_in has 1 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,266 | INFO | queue finished_data_out has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,266 | INFO | queue failed_jobs has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,267 | INFO | queue failed_payloads has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,267 | INFO | queue failed_data_in has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,267 | INFO | queue failed_data_out has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,267 | INFO | queue completed_jobs has 0 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,267 | INFO | queue completed_jobids has 1 job(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,267 | INFO | job 5203380234 has completed (purged errors)
[2021-09-27 09:53:00] 2021-09-27 13:52:03,267 | INFO | overall cleanup function is called
[2021-09-27 09:53:00] 2021-09-27 13:52:04,297 | INFO | --- collectZombieJob: --- 10, [92833]
[2021-09-27 09:53:00] 2021-09-27 13:52:04,297 | INFO | zombie collector trying to kill pid 92833
[2021-09-27 09:53:00] 2021-09-27 13:52:04,297 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-09-27 09:53:00] 2021-09-27 13:52:05,301 | INFO | collected zombie processes
[2021-09-27 09:53:00] 2021-09-27 13:52:05,301 | INFO | will now attempt to kill all subprocesses of pid=92833
[2021-09-27 09:53:00] 2021-09-27 13:52:06,017 | INFO | process IDs to be killed: [92833] (in reverse order)
[2021-09-27 09:53:00] 2021-09-27 13:52:07,388 | WARNING | found no corresponding commands to process id(s)
[2021-09-27 09:53:00] 2021-09-27 13:52:07,388 | INFO | Do not look for orphan processes in BOINC jobs
[2021-09-27 09:53:00] 2021-09-27 13:52:07,389 | INFO | ready for new job
[2021-09-27 09:53:00] 2021-09-27 13:52:07,389 | INFO | pilot has finished for previous job - re-establishing logging
[2021-09-27 09:53:00] 2021-09-27 13:52:07,390 | INFO | ****************************************
[2021-09-27 09:53:00] 2021-09-27 13:52:07,391 | INFO | *** PanDA Pilot version 2.12.6 (1) ***
[2021-09-27 09:53:00] 2021-09-27 13:52:07,391 | INFO | ****************************************
[2021-09-27 09:53:00] 2021-09-27 13:52:07,391 | INFO |
[2021-09-27 09:53:00] 2021-09-27 13:52:07,414 | INFO | architecture information:
[2021-09-27 09:53:00] 2021-09-27 13:52:10,705 | INFO |
[2021-09-27 09:53:00] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2021-09-27 09:53:00] Distributor ID: CentOS
[2021-09-27 09:53:00] Description: CentOS Linux release 7.8.2003 (Core)
[2021-09-27 09:53:00] Release: 7.8.2003
[2021-09-27 09:53:00] Codename: Core
[2021-09-27 09:53:00] 2021-09-27 13:52:10,705 | INFO | ****************************************
[2021-09-27 09:53:00] 2021-09-27 13:52:11,513 | INFO | sufficient remaining disk space (38110494720 B)
[2021-09-27 09:53:00] 2021-09-27 13:52:11,513 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2021-09-27 09:53:00] 2021-09-27 13:52:11,517 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2021-09-27 09:53:00] 2021-09-27 13:52:11,677 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2021-09-27 09:53:00] 2021-09-27 13:52:11,701 | INFO | [payload] validate_post thread has finished
[2021-09-27 09:53:00] 2021-09-27 13:52:11,897 | INFO | [payload] failed_post thread has finished
[2021-09-27 09:53:00] 2021-09-27 13:52:12,217 | INFO | [monitor] control thread has ended
[2021-09-27 09:53:00] 2021-09-27 13:52:12,653 | INFO | [payload] validate_pre thread has finished
[2021-09-27 09:53:00] 2021-09-27 13:52:12,989 | INFO | [payload] execute_payloads thread has finished
[2021-09-27 09:53:00] 2021-09-27 13:52:14,045 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-09-27 09:53:00] 2021-09-27 13:52:55,133 | WARNING | no jobs in monitored_payloads queue (waited for 78 s)
[2021-09-27 09:53:00] 2021-09-27 13:52:55,877 | INFO | end of generic workflow (traces error code: 0)
[2021-09-27 09:53:00] 2021-09-27 13:52:55,889 | INFO | traces error code: 0
[2021-09-27 09:53:00] 2021-09-27 13:52:55,889 | INFO | pilot has finished
[2021-09-27 09:53:00] 2021-09-27 13:52:56,172 [wrapper] ==== pilot stdout END ====
[2021-09-27 09:53:00] 2021-09-27 13:52:56,421 [wrapper] ==== wrapper stdout RESUME ====
[2021-09-27 09:53:00] 2021-09-27 13:52:56,593 [wrapper] Pilot exit status: 0
[2021-09-27 09:53:00] 2021-09-27 13:52:57,169 [wrapper] pandaids: 5203380234
[2021-09-27 09:53:00] 2021-09-27 13:52:57,461 [wrapper] apfmon messages muted
[2021-09-27 09:53:00] 2021-09-27 13:52:57,554 [wrapper] Test setup, not cleaning
[2021-09-27 09:53:00] 2021-09-27 13:52:57,770 [wrapper] ==== wrapper stdout END ====
[2021-09-27 09:53:00] 2021-09-27 13:52:58,041 [wrapper] ==== wrapper stderr END ====
[2021-09-27 09:53:00] 2021-09-27 13:52:58,337 [wrapper] wrapperexiting ec=0, duration=5976
[2021-09-27 09:53:00] 2021-09-27 13:52:58,524 [wrapper] apfmon messages muted
[2021-09-27 09:53:00] *** Error codes and diagnostics ***
[2021-09-27 09:53:00] "exeErrorCode": 0,
[2021-09-27 09:53:00] "exeErrorDiag": "",
[2021-09-27 09:53:00] "pilotErrorCode": 0,
[2021-09-27 09:53:00] "pilotErrorDiag": "",
[2021-09-27 09:53:00] *** Listing of results directory ***
[2021-09-27 09:53:00] total 43964
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 344681 Sep 27 07:28 pilot2.tar.gz
[2021-09-27 09:53:00] -rwx------ 1 boinc boinc 20816 Sep 27 07:36 runpilot2-wrapper.sh
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 3214 Sep 27 07:36 queuedata.json
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 107 Sep 27 08:13 wrapper_26015_x86_64-pc-linux-gnu
[2021-09-27 09:53:00] -rwxr-xr-x 1 boinc boinc 6966 Sep 27 08:13 run_atlas
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 112 Sep 27 08:13 job.xml
[2021-09-27 09:53:00] drwxrwx--x 2 boinc boinc 4096 Sep 27 08:13 shared
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 6168 Sep 27 08:13 init_data.xml
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 0 Sep 27 08:13 boinc_lockfile
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 16533 Sep 27 08:13 start_atlas.sh
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 354556 Sep 27 08:13 input.tar.gz
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 37658468 Sep 27 08:13 EVNT.04972714._000029.pool.root.1
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 2660 Sep 27 08:13 pandaJob.out
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 1079137 Sep 27 08:20 agis_schedconf.cvmfs.json
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 1944996 Sep 27 08:20 cric_ddmendpoints.json
[2021-09-27 09:53:00] drwx------ 4 boinc boinc 4096 Sep 27 08:20 pilot2
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 535 Sep 27 09:30 boinc_task_state.xml
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 2076723 Sep 27 09:51 Hits.hc_20216392.BOINC-TEST.8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.HITS.pool.root
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 1021 Sep 27 09:51 memory_monitor_summary.json
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 465790 Sep 27 09:51 8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log.tgz
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 7983 Sep 27 09:52 heartbeat.json
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 8192 Sep 27 09:52 boinc_mmap_file
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 26 Sep 27 09:52 wrapper_checkpoint.txt
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 1801 Sep 27 09:52 pilotlog.txt
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 210502 Sep 27 09:52 8b2e41e0-ca62-4f24-ad81-b0908ffc37ba_72001.job.log
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 582 Sep 27 09:52 output.list
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 680 Sep 27 09:53 runtime_log
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 696320 Sep 27 09:53 result.tar.gz
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 9232 Sep 27 09:53 runtime_log.err
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 566 Sep 27 09:53 KCNODmw63ozn7Olcko1bjSoqABFKDmABFKDmZr2WDmKNFKDmC4s43n.diag
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 21566 Sep 27 09:53 stderr.txt
[2021-09-27 09:53:00] HITS file was successfully produced:
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 2076723 Sep 27 09:51 shared/HITS.pool.root.1
[2021-09-27 09:53:00] *** Contents of shared directory: ***
[2021-09-27 09:53:00] total 39856
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 16533 Sep 27 08:13 start_atlas.sh
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 354556 Sep 27 08:13 input.tar.gz
[2021-09-27 09:53:00] -rw-r--r-- 1 boinc boinc 37658468 Sep 27 08:13 ATLAS.root_0
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 2076723 Sep 27 09:51 HITS.pool.root.1
[2021-09-27 09:53:00] -rw------- 1 boinc boinc 696320 Sep 27 09:53 result.tar.gz
09:53:02 (74324): run_atlas exited; CPU time 2120.789866
09:53:02 (74324): called boinc_finish(0)
</stderr_txt>
]]>
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