Name gxQLDmxh5ozn7Olcko1bjSoqABFKDmABFKDmZr2WDmQNFKDmxE8jtn_0
Workunit 2131542
Created 27 Sep 2021, 13:18:45 UTC
Sent 27 Sep 2021, 13:21:38 UTC
Report deadline 4 Oct 2021, 13:21:38 UTC
Received 27 Sep 2021, 15:43:30 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 59 min 20 sec
CPU time 20 min 9 sec
Validate state Valid
Credit 24.09
Device peak FLOPS 6.11 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.38 GB
Peak swap size 27.53 GB
Peak disk usage 81.20 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
09:43:44 (10871): wrapper (7.7.26015): starting
09:43:44 (10871): wrapper: running run_atlas (--nthreads 2)
[2021-09-27 09:43:44] Arguments: --nthreads 2
[2021-09-27 09:43:44] Threads: 2
[2021-09-27 09:43:44] Checking for CVMFS
[2021-09-27 09:43:45] Probing /cvmfs/atlas.cern.ch... OK
[2021-09-27 09:43:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-09-27 09:43:46] Running cvmfs_config stat atlas.cern.ch
[2021-09-27 09:43:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-09-27 09:43:48] 2.9.0.0 147949 9342 72312 92916 0 74 4046305 4194304 7986 130560 0 81610986 99.994 637850 854 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-09-27 09:43:48] CVMFS is ok
[2021-09-27 09:43:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-09-27 09:43:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-09-27 09:43:48] Small home clusters do not require a local http proxy but it is suggested if
[2021-09-27 09:43:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-09-27 09:43:48] Further information can be found at the LHC@home message board.
[2021-09-27 09:43:48] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-09-27 09:43:48] Checking for singularity binary...
[2021-09-27 09:43:48] Using singularity found in PATH at /usr/local/bin/singularity
[2021-09-27 09:43:48] Running /usr/local/bin/singularity --version
[2021-09-27 09:43:48] singularity version 3.7.2+10-ga969f0f8c
[2021-09-27 09:43:48] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-09-27 09:43:49] E5-2670
[2021-09-27 09:43:49] Singularity works
[2021-09-27 09:43:49] Set ATHENA_PROC_NUMBER=2
[2021-09-27 09:43:49] Starting ATLAS job with PandaID=5203504117
[2021-09-27 09:43:49] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/7 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-09-27 10:43:01]  *** The last 200 lines of the pilot log: ***
[2021-09-27 10:43:01]       "cpuEfficiency": 0.2413, 
[2021-09-27 10:43:01]       "cpuPWEfficiency": 0.2623, 
[2021-09-27 10:43:01]       "cpuTime": 8, 
[2021-09-27 10:43:01]       "cpuTimeTotal": 1308, 
[2021-09-27 10:43:01]       "externalCpuTime": 24, 
[2021-09-27 10:43:01]       "processedEvents": 2, 
[2021-09-27 10:43:01]       "trfPredata": null, 
[2021-09-27 10:43:01]       "wallTime": 2470
[2021-09-27 10:43:01]     }
[2021-09-27 10:43:01]   }
[2021-09-27 10:43:01] }
[2021-09-27 10:43:01] 2021-09-27 14:41:53,510 | DEBUG    | pilot.user.atlas.common          | update_server             | no need to update logstash for this job
[2021-09-27 10:43:01] 2021-09-27 14:41:53,510 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-09-27 10:43:01] 2021-09-27 14:41:53,510 | INFO     | pilot.control.job                | send_state                | job 5203504117 has finished - writing final server update
[2021-09-27 10:43:01] 2021-09-27 14:41:53,510 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 2
[2021-09-27 10:43:01] 2021-09-27 14:41:53,510 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -33176009 B to job metrics
[2021-09-27 10:43:01] 2021-09-27 14:41:53,511 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-09-27 10:43:01] 2021-09-27 14:41:53,511 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-09-27 10:43:01] 2021-09-27 14:41:53,512 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 41.89 B/s (using 36 data points, chi2=9267081)
[2021-09-27 10:43:01] 2021-09-27 14:41:53,512 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=4 nEvents=2 dbTime=116.59 dbData=4308190 leak=41.89 chi2=9267081 eventn
[2021-09-27 10:43:01] 2021-09-27 14:41:53,512 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.411765
[2021-09-27 10:43:01] 2021-09-27 14:41:53,512 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-09-27 10:43:01] 2021-09-27 14:41:53,517 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-09-27 10:43:01] 2021-09-27 14:41:53,934 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-5203504117/memory_monitor_summary.json (trf na
[2021-09-27 10:43:01] 2021-09-27 14:41:53,936 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 5.604, 'nthreads': 6.302, 'pss': 936456.0, 'rchar': 369494.0, 
[2021-09-27 10:43:01] 2021-09-27 14:41:53,936 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-09-27 10:43:01] 2021-09-27 14:41:53,936 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-09-27 10:43:01] 2021-09-27 14:41:53,936 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-09-27 10:43:01] 2021-09-27 14:41:53,941 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-09-27 10:43:01] 2021-09-27 14:41:53,941 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-09-27 10:43:01] 2021-09-27 14:41:53,941 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 5 s
[2021-09-27 10:43:01] 2021-09-27 14:41:53,941 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 256 s
[2021-09-27 10:43:01] 2021-09-27 14:41:53,941 | INFO     | pilot.util.timing                | timing_report             | . total setup = 261 s
[2021-09-27 10:43:01] 2021-09-27 14:41:53,942 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 2 s
[2021-09-27 10:43:01] 2021-09-27 14:41:53,942 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 2795 s
[2021-09-27 10:43:01] 2021-09-27 14:41:53,942 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 4 s
[2021-09-27 10:43:01] 2021-09-27 14:41:53,942 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-09-27 10:43:01] 2021-09-27 14:41:53,942 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-09-27 10:43:01] 2021-09-27 14:41:53,943 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5203504117', 'state': 'finished', 'timestamp': '2021-09-27T10:41:53
[2021-09-27 10:43:01] 2021-09-27 14:41:53,944 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/7/heartbeat.json
[2021-09-27 10:43:01] 2021-09-27 14:41:53,944 | DEBUG    | pilot.control.job                | queue_monitor             | job 5203504117 was dequeued from the monitored payloads queue
[2021-09-27 10:43:01] 2021-09-27 14:41:54,301 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-09-27 10:43:01] 2021-09-27 14:41:54,653 | INFO     | pilot.control.job                | make_job_report           | 
[2021-09-27 10:43:01] 2021-09-27 14:41:54,653 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-09-27 10:43:01] 2021-09-27 14:41:54,653 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-09-27 10:43:01] 2021-09-27 14:41:54,653 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5203504117
[2021-09-27 10:43:01] 2021-09-27 14:41:54,654 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-09-27 10:43:01] 2021-09-27 14:41:54,654 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,654 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-09-27 10:43:01] 2021-09-27 14:41:54,654 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-09-27 10:43:01] 2021-09-27 14:41:54,654 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-09-27 10:43:01] 2021-09-27 14:41:54,654 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-09-27 10:43:01] 2021-09-27 14:41:54,655 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-09-27 10:43:01] 2021-09-27 14:41:54,655 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-09-27 10:43:01] 2021-09-27 14:41:54,655 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-09-27 10:43:01] 2021-09-27 14:41:54,655 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 1358 s
[2021-09-27 10:43:01] 2021-09-27 14:41:54,655 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-09-27 10:43:01] 2021-09-27 14:41:54,655 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-09-27 10:43:01] 2021-09-27 14:41:54,655 | INFO     | pilot.control.job                | make_job_report           | pid: 27129
[2021-09-27 10:43:01] 2021-09-27 14:41:54,656 | INFO     | pilot.control.job                | make_job_report           | pgrp: 27129
[2021-09-27 10:43:01] 2021-09-27 14:41:54,656 | INFO     | pilot.control.job                | make_job_report           | corecount: 2
[2021-09-27 10:43:01] 2021-09-27 14:41:54,656 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-09-27 10:43:01] 2021-09-27 14:41:54,656 | INFO     | pilot.control.job                | make_job_report           | sizes: {18143854: 3887887, 18143855: 3887999, 18143856: 3888112, 18143860: 3888278, 18143867: 388822
[2021-09-27 10:43:01] 2021-09-27 14:41:54,657 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-09-27 10:43:01] 2021-09-27 14:41:54,657 | INFO     | pilot.control.job                | make_job_report           | 
[2021-09-27 10:43:01] 2021-09-27 14:41:54,657 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/7:
[2021-09-27 10:43:01] 
[2021-09-27 10:43:01] 2021-09-27 14:41:54,657 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/7
[2021-09-27 10:43:01] 2021-09-27 14:41:54,970 | DEBUG    | pilot.control.job                | has_job_completed         | total 42732
[2021-09-27 10:43:01] -rw------- 1 boinc boinc   321017 Sep 27 10:41 34d6a1b3-b1d6-4771-bf7e-e97107b01958_64453.1.job.log
[2021-09-27 10:43:01] -rw------- 1 boinc boinc   463350 Sep 27 10:41 34d6a1b3-b1d6-4771-bf7e-e97107b01958_64453.1.job.log.tgz
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  1080858 Sep 27 09:50 agis_schedconf.cvmfs.json
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc        0 Sep 27 09:43 boinc_lockfile
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     8192 Sep 27 10:41 boinc_mmap_file
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc      534 Sep 27 10:32 boinc_task_state.xml
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  1944996 Sep 27 09:50 cric_ddmendpoints.json
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc 37224345 Sep 27 09:43 EVNT.04972714._000026.pool.root.1
[2021-09-27 10:43:01] -rw------- 1 boinc boinc      130 Sep 27 09:43 gxQLDmxh5ozn7Olcko1bjSoqABFKDmABFKDmZr2WDmQNFKDmxE8jtn.diag
[2021-09-27 10:43:01] -rw------- 1 boinc boinc     7888 Sep 27 10:41 heartbeat.json
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     6167 Sep 27 09:43 init_data.xml
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc   356652 Sep 27 09:43 input.tar.gz
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc      112 Sep 27 09:43 job.xml
[2021-09-27 10:43:01] -rw------- 1 boinc boinc     1023 Sep 27 10:41 memory_monitor_summary.json
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  1549777 Sep 27 10:41 output.1.34d6a1b3-b1d6-4771-bf7e-e97107b01958_64453.pool.root
[2021-09-27 10:43:01] -rw------- 1 boinc boinc      536 Sep 27 10:41 output.list
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     2599 Sep 27 09:43 pandaJob.out
[2021-09-27 10:43:01] drwxrwx--- 3 boinc boinc     4096 Sep 27 10:41 PanDA_Pilot-5203504117/
[2021-09-27 10:43:01] drwx------ 4 boinc boinc     4096 Sep 27 09:50 pilot2/
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc   346717 Sep 23 07:39 pilot2.tar.gz
[2021-09-27 10:43:01] -rw------- 1 boinc boinc   301872 Sep 27 10:41 pilotlog.txt
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     3214 Sep 27 09:18 queuedata.json
[2021-09-27 10:43:01] -rwxr-xr-x 1 boinc boinc     6966 Sep 27 09:43 run_atlas*
[2021-09-27 10:43:01] -rwx------ 1 boinc boinc    20631 Sep 27 09:18 runpilot2-wrapper.sh*
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc      407 Sep 27 09:43 runtime_log
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     5565 Sep 27 09:43 runtime_log.err
[2021-09-27 10:43:01] drwxrwx--x 2 boinc boinc     4096 Sep 27 09:43 shared/
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc    16569 Sep 27 09:43 start_atlas.sh
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     2260 Sep 27 09:43 stderr.txt
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc      107 Sep 27 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc       25 Sep 27 10:41 wrapper_checkpoint.txt
[2021-09-27 10:43:01] 2021-09-27 14:41:54,971 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,971 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,972 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,972 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,972 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,972 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,973 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,973 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,973 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,973 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,973 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,973 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,973 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,974 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,974 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,974 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,974 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,974 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,974 | INFO     | pilot.control.job                | has_job_completed         | job 5203504117 has completed (purged errors)
[2021-09-27 10:43:01] 2021-09-27 14:41:54,975 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-09-27 10:43:01] 2021-09-27 14:41:54,980 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/7/PanDA_Pilot-5203504117
[2021-09-27 10:43:01] 2021-09-27 14:41:55,989 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [27129]
[2021-09-27 10:43:01] 2021-09-27 14:41:55,989 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 27129
[2021-09-27 10:43:01] 2021-09-27 14:41:55,989 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-09-27 10:43:01] 2021-09-27 14:41:56,161 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 79 s)
[2021-09-27 10:43:01] 2021-09-27 14:41:56,993 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-09-27 10:43:01] 2021-09-27 14:41:56,993 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=27129
[2021-09-27 10:43:01] 2021-09-27 14:41:57,513 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [27129] (in reverse order)
[2021-09-27 10:43:01] 2021-09-27 14:41:58,160 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-09-27 10:43:01] 2021-09-27 14:41:58,161 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-09-27 10:43:01] 2021-09-27 14:41:58,161 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-09-27 10:43:01] 2021-09-27 14:41:58,161 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-09-27 10:43:01] 2021-09-27 14:41:58,161 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-09-27 10:43:01] 2021-09-27 14:41:58,162 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-09-27 10:43:01] 2021-09-27 14:41:58,163 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-09-27 10:43:01] 2021-09-27 14:41:58,163 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-09-27 10:43:01] 2021-09-27 14:41:58,163 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-09-27 10:43:01] 2021-09-27 14:41:58,182 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-09-27 10:43:01] 2021-09-27 14:42:00,185 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-09-27 10:43:01] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-09-27 10:43:01] Distributor ID:	CentOS
[2021-09-27 10:43:01] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-09-27 10:43:01] Release:	7.8.2003
[2021-09-27 10:43:01] Codename:	Core
[2021-09-27 10:43:01] 2021-09-27 14:42:00,185 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-09-27 10:43:01] 2021-09-27 14:42:00,689 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/7
[2021-09-27 10:43:01] 2021-09-27 14:42:00,848 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (38924189696 B)
[2021-09-27 10:43:01] 2021-09-27 14:42:00,849 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-09-27 10:43:01] 2021-09-27 14:42:00,850 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:00,850 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:00,917 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-09-27 10:43:01] 2021-09-27 14:42:01,029 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,029 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:01,057 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-09-27 10:43:01] 2021-09-27 14:42:01,061 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-09-27 10:43:01] 2021-09-27 14:42:01,061 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,061 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:01,129 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,129 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:01,189 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,189 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:01,277 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-09-27 10:43:01] 2021-09-27 14:42:01,277 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,277 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:01,637 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-09-27 10:43:01] 2021-09-27 14:42:01,637 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,637 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:01,708 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,709 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:01,751 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,752 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:01,921 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:01,921 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:02,049 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:02,049 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:02,326 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:02,329 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:02,909 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-09-27 10:43:01] 2021-09-27 14:42:03,345 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-09-27 10:43:01] 2021-09-27 14:42:03,345 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:03,345 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:05,921 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-09-27 10:43:01] 2021-09-27 14:42:05,921 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:57,781 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 140 s)
[2021-09-27 10:43:01] 2021-09-27 14:42:57,782 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-09-27 10:43:01] 2021-09-27 14:42:57,782 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-09-27 10:43:01] 2021-09-27 14:42:57,782 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:58,669 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-09-27 10:43:01] 2021-09-27 14:42:58,669 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-09-27 10:43:01] 2021-09-27 14:42:58,670 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-09-27 10:43:01] 2021-09-27 14:42:59,006 [wrapper] ==== pilot stdout END ====
[2021-09-27 10:43:01] 2021-09-27 14:42:59,124 [wrapper] ==== wrapper stdout RESUME ====
[2021-09-27 10:43:01] 2021-09-27 14:42:59,229 [wrapper] Pilot exit status: 0
[2021-09-27 10:43:01] 2021-09-27 14:42:59,621 [wrapper] pandaids: 5203504117
[2021-09-27 10:43:01] 2021-09-27 14:42:59,922 [wrapper] apfmon messages muted
[2021-09-27 10:43:01] 2021-09-27 14:42:59,955 [wrapper] Test setup, not cleaning
[2021-09-27 10:43:01] 2021-09-27 14:43:00,113 [wrapper] ==== wrapper stdout END ====
[2021-09-27 10:43:01] 2021-09-27 14:43:00,171 [wrapper] ==== wrapper stderr END ====
[2021-09-27 10:43:01] 2021-09-27 14:43:00,453 [wrapper] wrapperexiting ec=0, duration=3546
[2021-09-27 10:43:01] 2021-09-27 14:43:00,581 [wrapper] apfmon messages muted
[2021-09-27 10:43:01]  *** Error codes and diagnostics ***
[2021-09-27 10:43:01]     "exeErrorCode": 0,
[2021-09-27 10:43:01]     "exeErrorDiag": "",
[2021-09-27 10:43:01]     "pilotErrorCode": 0,
[2021-09-27 10:43:01]     "pilotErrorDiag": "",
[2021-09-27 10:43:01]  *** Listing of results directory ***
[2021-09-27 10:43:01] total 44792
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc   346717 Sep 23 07:39 pilot2.tar.gz
[2021-09-27 10:43:01] -rwx------ 1 boinc boinc    20631 Sep 27 09:18 runpilot2-wrapper.sh
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     3214 Sep 27 09:18 queuedata.json
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc      107 Sep 27 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2021-09-27 10:43:01] -rwxr-xr-x 1 boinc boinc     6966 Sep 27 09:43 run_atlas
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc      112 Sep 27 09:43 job.xml
[2021-09-27 10:43:01] drwxrwx--x 2 boinc boinc     4096 Sep 27 09:43 shared
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     6167 Sep 27 09:43 init_data.xml
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc        0 Sep 27 09:43 boinc_lockfile
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc    16569 Sep 27 09:43 start_atlas.sh
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc   356652 Sep 27 09:43 input.tar.gz
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc 37224345 Sep 27 09:43 EVNT.04972714._000026.pool.root.1
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     2599 Sep 27 09:43 pandaJob.out
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  1080858 Sep 27 09:50 agis_schedconf.cvmfs.json
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  1944996 Sep 27 09:50 cric_ddmendpoints.json
[2021-09-27 10:43:01] drwx------ 4 boinc boinc     4096 Sep 27 09:50 pilot2
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc      534 Sep 27 10:32 boinc_task_state.xml
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  1549777 Sep 27 10:41 output.1.34d6a1b3-b1d6-4771-bf7e-e97107b01958_64453.pool.root
[2021-09-27 10:43:01] -rw------- 1 boinc boinc     1023 Sep 27 10:41 memory_monitor_summary.json
[2021-09-27 10:43:01] -rw------- 1 boinc boinc   463350 Sep 27 10:41 34d6a1b3-b1d6-4771-bf7e-e97107b01958_64453.1.job.log.tgz
[2021-09-27 10:43:01] -rw------- 1 boinc boinc     7888 Sep 27 10:41 heartbeat.json
[2021-09-27 10:43:01] -rw------- 1 boinc boinc     7363 Sep 27 10:42 pilotlog.txt
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     8192 Sep 27 10:42 boinc_mmap_file
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc       25 Sep 27 10:42 wrapper_checkpoint.txt
[2021-09-27 10:43:01] -rw------- 1 boinc boinc   335846 Sep 27 10:43 34d6a1b3-b1d6-4771-bf7e-e97107b01958_64453.1.job.log
[2021-09-27 10:43:01] -rw------- 1 boinc boinc      536 Sep 27 10:43 output.list
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc      748 Sep 27 10:43 runtime_log
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  2365440 Sep 27 10:43 result.tar.gz
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc     9549 Sep 27 10:43 runtime_log.err
[2021-09-27 10:43:01] -rw------- 1 boinc boinc      565 Sep 27 10:43 gxQLDmxh5ozn7Olcko1bjSoqABFKDmABFKDmZr2WDmQNFKDmxE8jtn.diag
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc    29740 Sep 27 10:43 stderr.txt
[2021-09-27 10:43:01] HITS file was successfully produced:
[2021-09-27 10:43:01] -rw------- 1 boinc boinc 1549777 Sep 27 10:41 shared/HITS.pool.root.1
[2021-09-27 10:43:01]  *** Contents of shared directory: ***
[2021-09-27 10:43:01] total 40552
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc    16569 Sep 27 09:43 start_atlas.sh
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc   356652 Sep 27 09:43 input.tar.gz
[2021-09-27 10:43:01] -rw-r--r-- 1 boinc boinc 37224345 Sep 27 09:43 ATLAS.root_0
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  1549777 Sep 27 10:41 HITS.pool.root.1
[2021-09-27 10:43:01] -rw------- 1 boinc boinc  2365440 Sep 27 10:43 result.tar.gz
10:43:03 (10871): run_atlas exited; CPU time 1209.893760
10:43:03 (10871): called boinc_finish(0)

</stderr_txt>
]]>


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