Name X7KLDmJK6ozn7Olcko1bjSoqABFKDmABFKDmZr2WDmSNFKDmhTdsJn_0
Workunit 2131548
Created 27 Sep 2021, 14:02:36 UTC
Sent 27 Sep 2021, 14:06:27 UTC
Report deadline 4 Oct 2021, 14:06:27 UTC
Received 27 Sep 2021, 15:43:30 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 36 min 44 sec
CPU time 7 min 10 sec
Validate state Valid
Credit 14.72
Device peak FLOPS 6.11 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.51 GB
Peak swap size 27.53 GB
Peak disk usage 84.83 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
10:08:52 (50001): wrapper (7.7.26015): starting
10:08:52 (50001): wrapper: running run_atlas (--nthreads 2)
[2021-09-27 10:08:52] Arguments: --nthreads 2
[2021-09-27 10:08:52] Threads: 2
[2021-09-27 10:08:52] Checking for CVMFS
[2021-09-27 10:08:53] Probing /cvmfs/atlas.cern.ch... OK
[2021-09-27 10:08:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-09-27 10:08:54] Running cvmfs_config stat atlas.cern.ch
[2021-09-27 10:08:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-09-27 10:08:55] 2.9.0.0 147949 9367 68340 92916 2 90 4071949 4194305 6877 130560 0 81898414 99.994 638076 854 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-09-27 10:08:55] CVMFS is ok
[2021-09-27 10:08:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-09-27 10:08:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-09-27 10:08:56] Small home clusters do not require a local http proxy but it is suggested if
[2021-09-27 10:08:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-09-27 10:08:56] Further information can be found at the LHC@home message board.
[2021-09-27 10:08:56] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-09-27 10:08:56] Checking for singularity binary...
[2021-09-27 10:08:56] Using singularity found in PATH at /usr/local/bin/singularity
[2021-09-27 10:08:56] Running /usr/local/bin/singularity --version
[2021-09-27 10:08:56] singularity version 3.7.2+10-ga969f0f8c
[2021-09-27 10:08:56] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-09-27 10:08:57] E5-2670
[2021-09-27 10:08:57] Singularity works
[2021-09-27 10:08:58] Set ATHENA_PROC_NUMBER=2
[2021-09-27 10:08:58] Starting ATLAS job with PandaID=5203530922
[2021-09-27 10:08:58] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/8 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-09-27 10:45:33]  *** The last 200 lines of the pilot log: ***
[2021-09-27 10:45:33] 2021-09-27 14:44:55,946 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-27 10:45:33] 2021-09-27 14:44:55,947 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-09-27 10:45:33]  activity=['pw', 'w', 'default']
[2021-09-27 10:45:33]  allow_lan=True
[2021-09-27 10:45:33]  allow_wan=False
[2021-09-27 10:45:33]  checksum={'adler32': 'a0b1a9cd'}
[2021-09-27 10:45:33]  dataset=hc_test.gangarbt.hc20216215.tid1109.BOINC-TEST.101
[2021-09-27 10:45:33]  ddm_activity=<filter object at 0x7f2cd907fd10>
[2021-09-27 10:45:33]  ddmendpoint=NDGF-T1_DATADISK
[2021-09-27 10:45:33]  direct_access_lan=False
[2021-09-27 10:45:33]  direct_access_wan=False
[2021-09-27 10:45:33]  domain=
[2021-09-27 10:45:33]  filesize=1659368
[2021-09-27 10:45:33]  filetype=output
[2021-09-27 10:45:33]  guid=DD006AE9-9CB4-AB49-80A5-157B57B8DC9A
[2021-09-27 10:45:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-27 10:45:33]  is_tar=False
[2021-09-27 10:45:33]  lfn=output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root
[2021-09-27 10:45:33]  mtime=0
[2021-09-27 10:45:33]  protocol_id=None
[2021-09-27 10:45:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-27 10:45:33]  replicas=None
[2021-09-27 10:45:33]  scope=hc_test
[2021-09-27 10:45:33]  status=None
[2021-09-27 10:45:33]  status_code=0
[2021-09-27 10:45:33]  storage_token=
[2021-09-27 10:45:33]  surl=/var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root
[2021-09-27 10:45:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/96/76/output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root
[2021-09-27 10:45:33]  workdir=None
[2021-09-27 10:45:33] ]
[2021-09-27 10:45:33] 2021-09-27 14:44:56,078 | INFO     | transferring file output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root from /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/output.1.379cc41e-5e61-4c
[2021-09-27 10:45:33] 2021-09-27 14:44:56,079 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root /var/lib/boin
[2021-09-27 10:45:33] 2021-09-27 14:44:56,497 | INFO     | Adding to output.list: output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasda
[2021-09-27 10:45:33] 2021-09-27 14:44:56,498 | INFO     | executing command: ps aux -q 57667
[2021-09-27 10:45:33] 2021-09-27 14:44:56,686 | INFO     | summary of transferred files:
[2021-09-27 10:45:33] 2021-09-27 14:44:56,686 | INFO     |  -- lfn=output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root, status_code=0, status=transferred
[2021-09-27 10:45:33] 2021-09-27 14:44:56,687 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922
[2021-09-27 10:45:33] 2021-09-27 14:44:57,053 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root_001 (2, No such file
[2021-09-27 10:45:33] 2021-09-27 14:44:57,053 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root_002 (2, No such file
[2021-09-27 10:45:33] 2021-09-27 14:44:57,055 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922
[2021-09-27 10:45:33] 2021-09-27 14:44:57,268 | INFO     | will create archive /var/lib/boinc-client/slots/8/tarball_PandaJob_5203530922_BOINC-TEST/379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz
[2021-09-27 10:45:33] 2021-09-27 14:44:57,269 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/8/tarball_PandaJob_5203530922_BOINC-TEST/379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz tarba
[2021-09-27 10:45:33] 2021-09-27 14:44:57,608 | INFO     | prepare to stage-out 1 log file(s)
[2021-09-27 10:45:33] 2021-09-27 14:44:57,608 | INFO     | stage-out will not be done in a container
[2021-09-27 10:45:33] 2021-09-27 14:44:57,609 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2021-09-27 10:45:33] 2021-09-27 14:44:57,609 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2021-09-27 10:45:33] 2021-09-27 14:44:57,609 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2021-09-27 10:45:33] 2021-09-27 14:44:57,610 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2021-09-27 10:45:33] 2021-09-27 14:44:57,908 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-27 10:45:33] 2021-09-27 14:44:57,917 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-09-27 10:45:33]  activity=['pl', 'pw', 'w', 'default']
[2021-09-27 10:45:33]  allow_lan=True
[2021-09-27 10:45:33]  allow_wan=False
[2021-09-27 10:45:33]  checksum={'adler32': 'adb110af'}
[2021-09-27 10:45:33]  dataset=hc_test.gangarbt.hc20216215.tid1109.BOINC-TEST.101
[2021-09-27 10:45:33]  ddm_activity=<filter object at 0x7f2cde51a910>
[2021-09-27 10:45:33]  ddmendpoint=NDGF-T1_DATADISK
[2021-09-27 10:45:33]  direct_access_lan=False
[2021-09-27 10:45:33]  direct_access_wan=False
[2021-09-27 10:45:33]  domain=
[2021-09-27 10:45:33]  filesize=537329
[2021-09-27 10:45:33]  filetype=log
[2021-09-27 10:45:33]  guid=bc448c20-587f-4114-b1e6-858ae7fb7551
[2021-09-27 10:45:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-27 10:45:33]  is_tar=False
[2021-09-27 10:45:33]  lfn=379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz
[2021-09-27 10:45:33]  mtime=0
[2021-09-27 10:45:33]  protocol_id=None
[2021-09-27 10:45:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-27 10:45:33]  replicas=None
[2021-09-27 10:45:33]  scope=hc_test
[2021-09-27 10:45:33]  status=None
[2021-09-27 10:45:33]  status_code=0
[2021-09-27 10:45:33]  storage_token=
[2021-09-27 10:45:33]  surl=/var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz
[2021-09-27 10:45:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/96/05/379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz
[2021-09-27 10:45:33]  workdir=None
[2021-09-27 10:45:33] ]
[2021-09-27 10:45:33] 2021-09-27 14:44:58,123 | INFO     | transferring file 379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz from /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/379cc41e-5e61-4c0f-9d23-f6a038
[2021-09-27 10:45:33] 2021-09-27 14:44:58,124 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz /var/lib/boinc-cli
[2021-09-27 10:45:33] 2021-09-27 14:44:58,543 | INFO     | Adding to output.list: 379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadis
[2021-09-27 10:45:33] 2021-09-27 14:44:58,543 | INFO     | executing command: ps aux -q 57667
[2021-09-27 10:45:33] 2021-09-27 14:44:59,136 | INFO     | summary of transferred files:
[2021-09-27 10:45:33] 2021-09-27 14:44:59,136 | INFO     |  -- lfn=379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz, status_code=0, status=transferred
[2021-09-27 10:45:33] 2021-09-27 14:44:59,136 | INFO     | stage-out finished correctly
[2021-09-27 10:45:33] 2021-09-27 14:45:02,261 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2021-09-27 10:45:33] 2021-09-27 14:45:03,605 | INFO     | job 5203530922 has state=finished
[2021-09-27 10:45:33] 2021-09-27 14:45:03,605 | INFO     | preparing for final server update for job 5203530922 in state='finished'
[2021-09-27 10:45:33] 2021-09-27 14:45:03,606 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2021-09-27 10:45:33] 2021-09-27 14:45:03,606 | INFO     | job 5203530922 has finished - writing final server update
[2021-09-27 10:45:33] 2021-09-27 14:45:03,606 | INFO     | will not add max space = -34429653 B to job metrics
[2021-09-27 10:45:33] 2021-09-27 14:45:03,607 | INFO     | fitting pss+swap vs Time
[2021-09-27 10:45:33] 2021-09-27 14:45:03,613 | INFO     | current memory leak: 545.07 B/s (using 18 data points, chi2=8154411)
[2021-09-27 10:45:33] 2021-09-27 14:45:03,613 | INFO     | mean actualcorecount: 4.190476
[2021-09-27 10:45:33] 2021-09-27 14:45:03,613 | INFO     | total number of processed events: 2 (read)
[2021-09-27 10:45:33] 2021-09-27 14:45:03,639 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-09-27 10:45:33] 2021-09-27 14:45:03,994 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-5203530922/memory_monitor_summary.json (trf name=prmon)
[2021-09-27 10:45:33] 2021-09-27 14:45:03,996 | INFO     | extracted standard info from prmon json
[2021-09-27 10:45:33] 2021-09-27 14:45:03,997 | INFO     | extracted standard memory fields from prmon json
[2021-09-27 10:45:33] 2021-09-27 14:45:03,997 | INFO     | ..............................
[2021-09-27 10:45:33] 2021-09-27 14:45:03,997 | INFO     | . Timing measurements:
[2021-09-27 10:45:33] 2021-09-27 14:45:03,998 | INFO     | . get job = 0 s
[2021-09-27 10:45:33] 2021-09-27 14:45:03,998 | INFO     | . initial setup = 4 s
[2021-09-27 10:45:33] 2021-09-27 14:45:03,998 | INFO     | . payload setup = 168 s
[2021-09-27 10:45:33] 2021-09-27 14:45:03,998 | INFO     | . total setup = 172 s
[2021-09-27 10:45:33] 2021-09-27 14:45:03,998 | INFO     | . stage-in = 1 s
[2021-09-27 10:45:33] 2021-09-27 14:45:03,998 | INFO     | . payload execution = 1644 s
[2021-09-27 10:45:33] 2021-09-27 14:45:03,998 | INFO     | . stage-out = 3 s
[2021-09-27 10:45:33] 2021-09-27 14:45:03,998 | INFO     | ..............................
[2021-09-27 10:45:33] 2021-09-27 14:45:04,257 | INFO     | 
[2021-09-27 10:45:33] 2021-09-27 14:45:04,265 | INFO     | job summary report
[2021-09-27 10:45:33] 2021-09-27 14:45:04,265 | INFO     | --------------------------------------------------
[2021-09-27 10:45:33] 2021-09-27 14:45:04,265 | INFO     | PanDA job id: 5203530922
[2021-09-27 10:45:33] 2021-09-27 14:45:04,265 | INFO     | task id: NULL
[2021-09-27 10:45:33] 2021-09-27 14:45:04,265 | INFO     | errors: (none)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,265 | INFO     | status: LOG_TRANSFER = DONE 
[2021-09-27 10:45:33] 2021-09-27 14:45:04,266 | INFO     | pilot state: finished 
[2021-09-27 10:45:33] 2021-09-27 14:45:04,266 | INFO     | transexitcode: 0
[2021-09-27 10:45:33] 2021-09-27 14:45:04,266 | INFO     | exeerrorcode: 0
[2021-09-27 10:45:33] 2021-09-27 14:45:04,266 | INFO     | exeerrordiag: 
[2021-09-27 10:45:33] 2021-09-27 14:45:04,266 | INFO     | exitcode: 0
[2021-09-27 10:45:33] 2021-09-27 14:45:04,266 | INFO     | exitmsg: OK
[2021-09-27 10:45:33] 2021-09-27 14:45:04,266 | INFO     | cpuconsumptiontime: 537 s
[2021-09-27 10:45:33] 2021-09-27 14:45:04,266 | INFO     | nevents: 2
[2021-09-27 10:45:33] 2021-09-27 14:45:04,267 | INFO     | neventsw: 0
[2021-09-27 10:45:33] 2021-09-27 14:45:04,267 | INFO     | pid: 61723
[2021-09-27 10:45:33] 2021-09-27 14:45:04,267 | INFO     | pgrp: 61723
[2021-09-27 10:45:33] 2021-09-27 14:45:04,267 | INFO     | corecount: 2
[2021-09-27 10:45:33] 2021-09-27 14:45:04,267 | INFO     | event service: False
[2021-09-27 10:45:33] 2021-09-27 14:45:04,267 | INFO     | sizes: {18145282: 3886744, 18145283: 3888020, 18145284: 3888133, 18145285: 3856450, 18145286: 3888241, 18145296: 3888297, 18147114: 3915008, 18147119: 3924476, 181
[2021-09-27 10:45:33] 2021-09-27 14:45:04,267 | INFO     | --------------------------------------------------
[2021-09-27 10:45:33] 2021-09-27 14:45:04,267 | INFO     | 
[2021-09-27 10:45:33] 2021-09-27 14:45:04,268 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8
[2021-09-27 10:45:33] 2021-09-27 14:45:04,601 | INFO     | queue jobs has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,602 | INFO     | queue payloads has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,602 | INFO     | queue data_in has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,602 | INFO     | queue data_out has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,602 | INFO     | queue current_data_in has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,602 | INFO     | queue validated_jobs has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,602 | INFO     | queue validated_payloads has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,602 | INFO     | queue monitored_payloads has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,603 | INFO     | queue finished_jobs has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,603 | INFO     | queue finished_payloads has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,603 | INFO     | queue finished_data_in has 1 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,603 | INFO     | queue finished_data_out has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,603 | INFO     | queue failed_jobs has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,603 | INFO     | queue failed_payloads has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,603 | INFO     | queue failed_data_in has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,604 | INFO     | queue failed_data_out has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,604 | INFO     | queue completed_jobs has 0 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,604 | INFO     | queue completed_jobids has 1 job(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,604 | INFO     | job 5203530922 has completed (purged errors)
[2021-09-27 10:45:33] 2021-09-27 14:45:04,604 | INFO     | overall cleanup function is called
[2021-09-27 10:45:33] 2021-09-27 14:45:05,629 | INFO     | --- collectZombieJob: --- 10, [61723]
[2021-09-27 10:45:33] 2021-09-27 14:45:05,629 | INFO     | zombie collector trying to kill pid 61723
[2021-09-27 10:45:33] 2021-09-27 14:45:05,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-09-27 10:45:33] 2021-09-27 14:45:06,637 | INFO     | collected zombie processes
[2021-09-27 10:45:33] 2021-09-27 14:45:06,637 | INFO     | will now attempt to kill all subprocesses of pid=61723
[2021-09-27 10:45:33] 2021-09-27 14:45:07,065 | INFO     | process IDs to be killed: [61723] (in reverse order)
[2021-09-27 10:45:33] 2021-09-27 14:45:07,258 | WARNING  | found no corresponding commands to process id(s)
[2021-09-27 10:45:33] 2021-09-27 14:45:07,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2021-09-27 10:45:33] 2021-09-27 14:45:07,259 | INFO     | ready for new job
[2021-09-27 10:45:33] 2021-09-27 14:45:07,259 | INFO     | pilot has finished for previous job - re-establishing logging
[2021-09-27 10:45:33] 2021-09-27 14:45:07,260 | INFO     | ****************************************
[2021-09-27 10:45:33] 2021-09-27 14:45:07,260 | INFO     | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-09-27 10:45:33] 2021-09-27 14:45:07,260 | INFO     | ****************************************
[2021-09-27 10:45:33] 2021-09-27 14:45:07,260 | INFO     | 
[2021-09-27 10:45:33] 2021-09-27 14:45:07,290 | INFO     | architecture information:
[2021-09-27 10:45:33] 2021-09-27 14:45:09,159 | INFO     | 
[2021-09-27 10:45:33] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-09-27 10:45:33] Distributor ID:	CentOS
[2021-09-27 10:45:33] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-09-27 10:45:33] Release:	7.8.2003
[2021-09-27 10:45:33] Codename:	Core
[2021-09-27 10:45:33] 2021-09-27 14:45:09,160 | INFO     | ****************************************
[2021-09-27 10:45:33] 2021-09-27 14:45:09,931 | INFO     | sufficient remaining disk space (38313918464 B)
[2021-09-27 10:45:33] 2021-09-27 14:45:09,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2021-09-27 10:45:33] 2021-09-27 14:45:09,932 | WARNING  | aborting monitor loop since graceful_stop has been set
[2021-09-27 10:45:33] 2021-09-27 14:45:09,932 | INFO     | [monitor] control thread has ended
[2021-09-27 10:45:33] 2021-09-27 14:45:09,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2021-09-27 10:45:33] 2021-09-27 14:45:09,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2021-09-27 10:45:33] 2021-09-27 14:45:10,113 | INFO     | [payload] validate_pre thread has finished
[2021-09-27 10:45:33] 2021-09-27 14:45:10,229 | INFO     | [payload] execute_payloads thread has finished
[2021-09-27 10:45:33] 2021-09-27 14:45:10,414 | INFO     | [payload] validate_post thread has finished
[2021-09-27 10:45:33] 2021-09-27 14:45:11,089 | INFO     | [payload] failed_post thread has finished
[2021-09-27 10:45:33] 2021-09-27 14:45:13,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-09-27 10:45:33] 2021-09-27 14:45:29,677 | WARNING  | no jobs in monitored_payloads queue (waited for 78 s)
[2021-09-27 10:45:33] 2021-09-27 14:45:30,521 | INFO     | end of generic workflow (traces error code: 0)
[2021-09-27 10:45:33] 2021-09-27 14:45:30,522 | INFO     | traces error code: 0
[2021-09-27 10:45:33] 2021-09-27 14:45:30,523 | INFO     | pilot has finished
[2021-09-27 10:45:33] 2021-09-27 14:45:30,765 [wrapper] ==== pilot stdout END ====
[2021-09-27 10:45:33] 2021-09-27 14:45:30,811 [wrapper] ==== wrapper stdout RESUME ====
[2021-09-27 10:45:33] 2021-09-27 14:45:30,919 [wrapper] Pilot exit status: 0
[2021-09-27 10:45:33] 2021-09-27 14:45:31,370 [wrapper] pandaids: 5203530922
[2021-09-27 10:45:33] 2021-09-27 14:45:31,507 [wrapper] apfmon messages muted
[2021-09-27 10:45:33] 2021-09-27 14:45:31,604 [wrapper] Test setup, not cleaning
[2021-09-27 10:45:33] 2021-09-27 14:45:31,697 [wrapper] ==== wrapper stdout END ====
[2021-09-27 10:45:33] 2021-09-27 14:45:31,845 [wrapper] ==== wrapper stderr END ====
[2021-09-27 10:45:33] 2021-09-27 14:45:32,096 [wrapper] wrapperexiting ec=0, duration=2189
[2021-09-27 10:45:33] 2021-09-27 14:45:32,269 [wrapper] apfmon messages muted
[2021-09-27 10:45:33]  *** Error codes and diagnostics ***
[2021-09-27 10:45:33]     "exeErrorCode": 0,
[2021-09-27 10:45:33]     "exeErrorDiag": "",
[2021-09-27 10:45:33]     "pilotErrorCode": 0,
[2021-09-27 10:45:33]     "pilotErrorDiag": "",
[2021-09-27 10:45:33]  *** Listing of results directory ***
[2021-09-27 10:45:33] total 46420
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc   344681 Sep 27 09:26 pilot2.tar.gz
[2021-09-27 10:45:33] -rwx------ 1 boinc boinc    20816 Sep 27 09:58 runpilot2-wrapper.sh
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc     3214 Sep 27 10:02 queuedata.json
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc      107 Sep 27 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2021-09-27 10:45:33] -rwxr-xr-x 1 boinc boinc     6966 Sep 27 10:08 run_atlas
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc      112 Sep 27 10:08 job.xml
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc     6167 Sep 27 10:08 init_data.xml
[2021-09-27 10:45:33] drwxrwx--x 2 boinc boinc     4096 Sep 27 10:08 shared
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc        0 Sep 27 10:08 boinc_lockfile
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc    16541 Sep 27 10:08 start_atlas.sh
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc   354555 Sep 27 10:08 input.tar.gz
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc 38971704 Sep 27 10:08 EVNT.04972714._000035.pool.root.1
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc     2617 Sep 27 10:08 pandaJob.out
[2021-09-27 10:45:33] -rw------- 1 boinc boinc  1080866 Sep 27 10:14 agis_schedconf.cvmfs.json
[2021-09-27 10:45:33] -rw------- 1 boinc boinc  1944996 Sep 27 10:14 cric_ddmendpoints.json
[2021-09-27 10:45:33] drwx------ 4 boinc boinc     4096 Sep 27 10:14 pilot2
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc      534 Sep 27 10:37 boinc_task_state.xml
[2021-09-27 10:45:33] -rw------- 1 boinc boinc  1659368 Sep 27 10:44 output.1.379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.pool.root
[2021-09-27 10:45:33] -rw------- 1 boinc boinc     1019 Sep 27 10:44 memory_monitor_summary.json
[2021-09-27 10:45:33] -rw------- 1 boinc boinc   537329 Sep 27 10:44 379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log.tgz
[2021-09-27 10:45:33] -rw------- 1 boinc boinc     8352 Sep 27 10:45 heartbeat.json
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc     8192 Sep 27 10:45 boinc_mmap_file
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc       25 Sep 27 10:45 wrapper_checkpoint.txt
[2021-09-27 10:45:33] -rw------- 1 boinc boinc     1893 Sep 27 10:45 pilotlog.txt
[2021-09-27 10:45:33] -rw------- 1 boinc boinc   114233 Sep 27 10:45 379cc41e-5e61-4c0f-9d23-f6a038124ccc_55418.1.job.log
[2021-09-27 10:45:33] -rw------- 1 boinc boinc      536 Sep 27 10:45 output.list
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc      748 Sep 27 10:45 runtime_log
[2021-09-27 10:45:33] -rw------- 1 boinc boinc  2334720 Sep 27 10:45 result.tar.gz
[2021-09-27 10:45:33] -rw------- 1 boinc boinc      564 Sep 27 10:45 X7KLDmJK6ozn7Olcko1bjSoqABFKDmABFKDmZr2WDmSNFKDmhTdsJn.diag
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc     9541 Sep 27 10:45 runtime_log.err
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc    21466 Sep 27 10:45 stderr.txt
[2021-09-27 10:45:33] HITS file was successfully produced:
[2021-09-27 10:45:33] -rw------- 1 boinc boinc 1659368 Sep 27 10:44 shared/HITS.pool.root.1
[2021-09-27 10:45:33]  *** Contents of shared directory: ***
[2021-09-27 10:45:33] total 42332
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc 38971704 Sep 27 10:08 ATLAS.root_0
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc    16541 Sep 27 10:08 start_atlas.sh
[2021-09-27 10:45:33] -rw-r--r-- 1 boinc boinc   354555 Sep 27 10:08 input.tar.gz
[2021-09-27 10:45:33] -rw------- 1 boinc boinc  1659368 Sep 27 10:44 HITS.pool.root.1
[2021-09-27 10:45:33] -rw------- 1 boinc boinc  2334720 Sep 27 10:45 result.tar.gz
10:45:35 (50001): run_atlas exited; CPU time 430.055391
10:45:35 (50001): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN