Name | P7vMDml3Fpzn7Olcko1bjSoqABFKDmABFKDmZr2WDmBOFKDmONxrWo_0 |
Workunit | 2131641 |
Created | 28 Sep 2021, 0:21:59 UTC |
Sent | 28 Sep 2021, 0:58:04 UTC |
Report deadline | 5 Oct 2021, 0:58:04 UTC |
Received | 28 Sep 2021, 3:08:43 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 49 min 0 sec |
CPU time | 7 min 19 sec |
Validate state | Valid |
Credit | 19.23 |
Device peak FLOPS | 6.11 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.50 GB |
Peak swap size | 28.10 GB |
Peak disk usage | 84.89 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 21:37:33 (61576): wrapper (7.7.26015): starting 21:37:33 (61576): wrapper: running run_atlas (--nthreads 2) [2021-09-27 21:37:33] Arguments: --nthreads 2 [2021-09-27 21:37:33] Threads: 2 [2021-09-27 21:37:33] Checking for CVMFS [2021-09-27 21:37:34] Probing /cvmfs/atlas.cern.ch... OK [2021-09-27 21:37:35] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-09-27 21:37:35] Running cvmfs_config stat atlas.cern.ch [2021-09-27 21:37:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-09-27 21:37:37] 2.9.0.0 147949 10056 68988 92948 3 62 2195562 4194304 7046 130560 0 88275261 99.994 664761 847 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-09-27 21:37:37] CVMFS is ok [2021-09-27 21:37:37] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-09-27 21:37:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-09-27 21:37:37] Small home clusters do not require a local http proxy but it is suggested if [2021-09-27 21:37:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-09-27 21:37:37] Further information can be found at the LHC@home message board. [2021-09-27 21:37:37] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-09-27 21:37:37] Checking for singularity binary... [2021-09-27 21:37:37] Using singularity found in PATH at /usr/local/bin/singularity [2021-09-27 21:37:37] Running /usr/local/bin/singularity --version [2021-09-27 21:37:37] singularity version 3.7.2+10-ga969f0f8c [2021-09-27 21:37:37] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-09-27 21:37:38] E5-2670 [2021-09-27 21:37:38] Singularity works [2021-09-27 21:37:38] Set ATHENA_PROC_NUMBER=2 [2021-09-27 21:37:38] Starting ATLAS job with PandaID=5204050971 [2021-09-27 21:37:38] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/11 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-09-27 22:26:30] *** The last 200 lines of the pilot log: *** [2021-09-27 22:26:30] domain= [2021-09-27 22:26:30] filesize=1659380 [2021-09-27 22:26:30] filetype=output [2021-09-27 22:26:30] guid=0763B766-B402-574F-8482-E26F41306491 [2021-09-27 22:26:30] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK'] [2021-09-27 22:26:30] is_tar=False [2021-09-27 22:26:30] lfn=output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root [2021-09-27 22:26:30] mtime=0 [2021-09-27 22:26:30] protocol_id=None [2021-09-27 22:26:30] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': ' [2021-09-27 22:26:30] replicas=None [2021-09-27 22:26:30] scope=hc_test [2021-09-27 22:26:30] status=None [2021-09-27 22:26:30] status_code=0 [2021-09-27 22:26:30] storage_token= [2021-09-27 22:26:30] surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root [2021-09-27 22:26:30] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/42/16/output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root [2021-09-27 22:26:30] workdir=None [2021-09-27 22:26:30] ] [2021-09-27 22:26:30] 2021-09-28 02:25:18,869 | INFO | transferring file output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root from /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/output.1.6514fb8e-2d0e-4 [2021-09-27 22:26:30] 2021-09-28 02:25:18,869 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root /var/lib/boi [2021-09-27 22:26:30] 2021-09-28 02:25:19,498 | INFO | Adding to output.list: output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasda [2021-09-27 22:26:30] 2021-09-28 02:25:19,498 | INFO | executing command: ps aux -q 74604 [2021-09-27 22:26:30] 2021-09-28 02:25:20,391 | INFO | summary of transferred files: [2021-09-27 22:26:30] 2021-09-28 02:25:20,391 | INFO | -- lfn=output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root, status_code=0, status=transferred [2021-09-27 22:26:30] 2021-09-28 02:25:20,391 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971 [2021-09-27 22:26:30] 2021-09-28 02:25:20,917 | WARNING | failed to remove directory: /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root_001 (2, No such fil [2021-09-27 22:26:30] 2021-09-28 02:25:20,918 | WARNING | failed to remove directory: /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root_002 (2, No such fil [2021-09-27 22:26:30] 2021-09-28 02:25:20,930 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971 [2021-09-27 22:26:30] 2021-09-28 02:25:21,570 | INFO | will create archive /var/lib/boinc-client/slots/11/tarball_PandaJob_5204050971_BOINC-TEST/6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz [2021-09-27 22:26:30] 2021-09-28 02:25:21,571 | INFO | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/11/tarball_PandaJob_5204050971_BOINC-TEST/6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz tarb [2021-09-27 22:26:30] 2021-09-28 02:25:22,326 | INFO | prepare to stage-out 1 log file(s) [2021-09-27 22:26:30] 2021-09-28 02:25:22,326 | INFO | stage-out will not be done in a container [2021-09-27 22:26:30] 2021-09-28 02:25:22,327 | INFO | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']} [2021-09-27 22:26:30] 2021-09-28 02:25:22,327 | INFO | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK'] [2021-09-27 22:26:30] 2021-09-28 02:25:22,327 | INFO | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK [2021-09-27 22:26:30] 2021-09-28 02:25:22,327 | INFO | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default'] [2021-09-27 22:26:30] 2021-09-28 02:25:22,787 | INFO | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l [2021-09-27 22:26:30] 2021-09-28 02:25:22,787 | INFO | ready to transfer (stage-out) files: [ accessmode= [2021-09-27 22:26:30] activity=['pl', 'pw', 'w', 'default'] [2021-09-27 22:26:30] allow_lan=True [2021-09-27 22:26:30] allow_wan=False [2021-09-27 22:26:30] checksum={'adler32': 'fe1589ab'} [2021-09-27 22:26:30] dataset=hc_test.gangarbt.hc20216215.tid1109.BOINC-TEST.101 [2021-09-27 22:26:30] ddm_activity=<filter object at 0x7f7d0da7cfd0> [2021-09-27 22:26:30] ddmendpoint=NDGF-T1_DATADISK [2021-09-27 22:26:30] direct_access_lan=False [2021-09-27 22:26:30] direct_access_wan=False [2021-09-27 22:26:30] domain= [2021-09-27 22:26:30] filesize=542137 [2021-09-27 22:26:30] filetype=log [2021-09-27 22:26:30] guid=99344a7d-a4f9-4775-afa0-1b3a7faa3740 [2021-09-27 22:26:30] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK'] [2021-09-27 22:26:30] is_tar=False [2021-09-27 22:26:30] lfn=6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz [2021-09-27 22:26:30] mtime=0 [2021-09-27 22:26:30] protocol_id=None [2021-09-27 22:26:30] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': ' [2021-09-27 22:26:30] replicas=None [2021-09-27 22:26:30] scope=hc_test [2021-09-27 22:26:30] status=None [2021-09-27 22:26:30] status_code=0 [2021-09-27 22:26:30] storage_token= [2021-09-27 22:26:30] surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz [2021-09-27 22:26:30] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/53/af/6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz [2021-09-27 22:26:30] workdir=None [2021-09-27 22:26:30] ] [2021-09-27 22:26:30] 2021-09-28 02:25:23,047 | INFO | transferring file 6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz from /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/6514fb8e-2d0e-4f95-b496-c5089 [2021-09-27 22:26:30] 2021-09-28 02:25:23,048 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz /var/lib/boinc-cl [2021-09-27 22:26:30] 2021-09-28 02:25:23,838 | INFO | Adding to output.list: 6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadis [2021-09-27 22:26:30] 2021-09-28 02:25:23,839 | INFO | executing command: ps aux -q 74604 [2021-09-27 22:26:30] 2021-09-28 02:25:23,877 | INFO | monitor loop #30: job 0:5204050971 is in state 'stageout' [2021-09-27 22:26:30] 2021-09-28 02:25:23,878 | INFO | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 144637 B [2021-09-27 22:26:30] 2021-09-28 02:25:23,879 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1504370 B [2021-09-27 22:26:30] 2021-09-28 02:25:23,879 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 13082 B [2021-09-27 22:26:30] 2021-09-28 02:25:24,202 | INFO | sufficient remaining disk space (41732276224 B) [2021-09-27 22:26:30] 2021-09-28 02:25:24,233 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added) [2021-09-27 22:26:30] 2021-09-28 02:25:24,241 | INFO | size of work directory /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971: 2888040 B (within 61362667520 B limit) [2021-09-27 22:26:30] 2021-09-28 02:25:24,241 | INFO | pfn file=/var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/EVNT.04972714._000035.pool.root.1 does not exist (skip from workdir size calculation) [2021-09-27 22:26:30] 2021-09-28 02:25:24,241 | INFO | pfn file=/var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root does not exist (skip from workdir size [2021-09-27 22:26:30] 2021-09-28 02:25:24,241 | INFO | total size of present input+output files: 0 B (workdir size: 2888040 B) [2021-09-27 22:26:30] 2021-09-28 02:25:24,242 | INFO | output file size check: skipping output file /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root si [2021-09-27 22:26:30] 2021-09-28 02:25:24,564 | INFO | summary of transferred files: [2021-09-27 22:26:30] 2021-09-28 02:25:24,565 | INFO | -- lfn=6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz, status_code=0, status=transferred [2021-09-27 22:26:30] 2021-09-28 02:25:24,565 | INFO | stage-out finished correctly [2021-09-27 22:26:30] 2021-09-28 02:25:24,903 | INFO | number of running child processes to parent process 80997: 1 [2021-09-27 22:26:30] 2021-09-28 02:25:24,903 | INFO | maximum number of monitored processes: 7 [2021-09-27 22:26:30] 2021-09-28 02:25:25,011 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2021-09-27 22:26:30] 2021-09-28 02:25:25,478 | INFO | job 5204050971 has state=finished [2021-09-27 22:26:30] 2021-09-28 02:25:25,478 | INFO | preparing for final server update for job 5204050971 in state='finished' [2021-09-27 22:26:30] 2021-09-28 02:25:25,478 | INFO | pilot will not update the server (heartbeat message will be written to file) [2021-09-27 22:26:30] 2021-09-28 02:25:25,479 | INFO | job 5204050971 has finished - writing final server update [2021-09-27 22:26:30] 2021-09-28 02:25:25,480 | INFO | fitting pss+swap vs Time [2021-09-27 22:26:30] 2021-09-28 02:25:25,481 | INFO | current memory leak: 101.92 B/s (using 28 data points, chi2=17164825) [2021-09-27 22:26:30] 2021-09-28 02:25:25,485 | INFO | mean actualcorecount: 4.555556 [2021-09-27 22:26:30] 2021-09-28 02:25:25,485 | INFO | total number of processed events: 2 (read) [2021-09-27 22:26:30] 2021-09-28 02:25:25,537 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-09-27 22:26:30] 2021-09-28 02:25:26,309 | INFO | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-5204050971/memory_monitor_summary.json (trf name=prmon) [2021-09-27 22:26:30] 2021-09-28 02:25:26,311 | INFO | extracted standard info from prmon json [2021-09-27 22:26:30] 2021-09-28 02:25:26,312 | INFO | extracted standard memory fields from prmon json [2021-09-27 22:26:30] 2021-09-28 02:25:26,312 | INFO | .............................. [2021-09-27 22:26:30] 2021-09-28 02:25:26,312 | INFO | . Timing measurements: [2021-09-27 22:26:30] 2021-09-28 02:25:26,312 | INFO | . get job = 0 s [2021-09-27 22:26:30] 2021-09-28 02:25:26,312 | INFO | . initial setup = 5 s [2021-09-27 22:26:30] 2021-09-28 02:25:26,312 | INFO | . payload setup = 200 s [2021-09-27 22:26:30] 2021-09-28 02:25:26,312 | INFO | . total setup = 205 s [2021-09-27 22:26:30] 2021-09-28 02:25:26,313 | INFO | . stage-in = 2 s [2021-09-27 22:26:30] 2021-09-28 02:25:26,313 | INFO | . payload execution = 2269 s [2021-09-27 22:26:30] 2021-09-28 02:25:26,313 | INFO | . stage-out = 6 s [2021-09-27 22:26:30] 2021-09-28 02:25:26,313 | INFO | .............................. [2021-09-27 22:26:30] 2021-09-28 02:25:26,845 | INFO | [2021-09-27 22:26:30] 2021-09-28 02:25:26,845 | INFO | job summary report [2021-09-27 22:26:30] 2021-09-28 02:25:26,845 | INFO | -------------------------------------------------- [2021-09-27 22:26:30] 2021-09-28 02:25:26,845 | INFO | PanDA job id: 5204050971 [2021-09-27 22:26:30] 2021-09-28 02:25:26,845 | INFO | task id: NULL [2021-09-27 22:26:30] 2021-09-28 02:25:26,846 | INFO | errors: (none) [2021-09-27 22:26:30] 2021-09-28 02:25:26,846 | INFO | status: LOG_TRANSFER = DONE [2021-09-27 22:26:30] 2021-09-28 02:25:26,846 | INFO | pilot state: finished [2021-09-27 22:26:30] 2021-09-28 02:25:26,846 | INFO | transexitcode: 0 [2021-09-27 22:26:30] 2021-09-28 02:25:26,846 | INFO | exeerrorcode: 0 [2021-09-27 22:26:30] 2021-09-28 02:25:26,846 | INFO | exeerrordiag: [2021-09-27 22:26:30] 2021-09-28 02:25:26,846 | INFO | exitcode: 0 [2021-09-27 22:26:30] 2021-09-28 02:25:26,846 | INFO | exitmsg: OK [2021-09-27 22:26:30] 2021-09-28 02:25:26,847 | INFO | cpuconsumptiontime: 560 s [2021-09-27 22:26:30] 2021-09-28 02:25:26,847 | INFO | nevents: 2 [2021-09-27 22:26:30] 2021-09-28 02:25:26,847 | INFO | neventsw: 0 [2021-09-27 22:26:30] 2021-09-28 02:25:26,847 | INFO | pid: 80997 [2021-09-27 22:26:30] 2021-09-28 02:25:26,847 | INFO | pgrp: 80997 [2021-09-27 22:26:30] 2021-09-28 02:25:26,847 | INFO | corecount: 2 [2021-09-27 22:26:30] 2021-09-28 02:25:26,847 | INFO | event service: False [2021-09-27 22:26:30] 2021-09-28 02:25:26,847 | INFO | sizes: {18186648: 3887909, 18186649: 3888021, 18186650: 3888078, 18186651: 3888240, 18186653: 3888242, 18186662: 3888298, 18189138: 3915366, 18189145: 3924892, 181 [2021-09-27 22:26:30] 2021-09-28 02:25:26,848 | INFO | -------------------------------------------------- [2021-09-27 22:26:30] 2021-09-28 02:25:26,848 | INFO | [2021-09-27 22:26:30] 2021-09-28 02:25:26,848 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/11 [2021-09-27 22:26:30] 2021-09-28 02:25:27,493 | INFO | queue jobs has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,493 | INFO | queue payloads has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,494 | INFO | queue data_in has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,494 | INFO | queue data_out has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,494 | INFO | queue current_data_in has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,494 | INFO | queue validated_jobs has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,494 | INFO | queue validated_payloads has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,494 | INFO | queue monitored_payloads has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,494 | INFO | queue finished_jobs has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,495 | INFO | queue finished_payloads has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,495 | INFO | queue finished_data_in has 1 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,495 | INFO | queue finished_data_out has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,495 | INFO | queue failed_jobs has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,495 | INFO | queue failed_payloads has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,495 | INFO | queue failed_data_in has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,495 | INFO | queue failed_data_out has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,496 | INFO | queue completed_jobs has 0 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,496 | INFO | queue completed_jobids has 1 job(s) [2021-09-27 22:26:30] 2021-09-28 02:25:27,496 | INFO | job 5204050971 has completed (purged errors) [2021-09-27 22:26:30] 2021-09-28 02:25:27,496 | INFO | overall cleanup function is called [2021-09-27 22:26:30] 2021-09-28 02:25:28,525 | INFO | --- collectZombieJob: --- 10, [80997] [2021-09-27 22:26:30] 2021-09-28 02:25:28,525 | INFO | zombie collector trying to kill pid 80997 [2021-09-27 22:26:30] 2021-09-28 02:25:28,525 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2021-09-27 22:26:30] 2021-09-28 02:25:29,529 | INFO | collected zombie processes [2021-09-27 22:26:30] 2021-09-28 02:25:29,529 | INFO | will now attempt to kill all subprocesses of pid=80997 [2021-09-27 22:26:30] 2021-09-28 02:25:30,257 | INFO | process IDs to be killed: [80997] (in reverse order) [2021-09-27 22:26:30] 2021-09-28 02:25:31,018 | WARNING | found no corresponding commands to process id(s) [2021-09-27 22:26:30] 2021-09-28 02:25:31,018 | INFO | Do not look for orphan processes in BOINC jobs [2021-09-27 22:26:30] 2021-09-28 02:25:31,019 | INFO | ready for new job [2021-09-27 22:26:30] 2021-09-28 02:25:31,019 | INFO | pilot has finished for previous job - re-establishing logging [2021-09-27 22:26:30] 2021-09-28 02:25:31,020 | INFO | **************************************** [2021-09-27 22:26:30] 2021-09-28 02:25:31,020 | INFO | *** PanDA Pilot version 2.12.6 (1) *** [2021-09-27 22:26:30] 2021-09-28 02:25:31,020 | INFO | **************************************** [2021-09-27 22:26:30] 2021-09-28 02:25:31,020 | INFO | [2021-09-27 22:26:30] 2021-09-28 02:25:31,046 | INFO | architecture information: [2021-09-27 22:26:30] 2021-09-28 02:25:33,112 | INFO | [2021-09-27 22:26:30] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-09-27 22:26:30] Distributor ID: CentOS [2021-09-27 22:26:30] Description: CentOS Linux release 7.8.2003 (Core) [2021-09-27 22:26:30] Release: 7.8.2003 [2021-09-27 22:26:30] Codename: Core [2021-09-27 22:26:30] 2021-09-28 02:25:33,112 | INFO | **************************************** [2021-09-27 22:26:30] 2021-09-28 02:25:33,894 | INFO | sufficient remaining disk space (41734373376 B) [2021-09-27 22:26:30] 2021-09-28 02:25:33,894 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2021-09-27 22:26:30] 2021-09-28 02:25:33,895 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2021-09-27 22:26:30] 2021-09-28 02:25:34,053 | INFO | [payload] execute_payloads thread has finished [2021-09-27 22:26:30] 2021-09-28 02:25:34,185 | INFO | [monitor] control thread has ended [2021-09-27 22:26:30] 2021-09-28 02:25:34,205 | INFO | [payload] failed_post thread has finished [2021-09-27 22:26:30] 2021-09-28 02:25:34,313 | INFO | [payload] validate_post thread has finished [2021-09-27 22:26:30] 2021-09-28 02:25:34,549 | INFO | [payload] validate_pre thread has finished [2021-09-27 22:26:30] 2021-09-28 02:25:35,877 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2021-09-27 22:26:30] 2021-09-28 02:25:36,029 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2021-09-27 22:26:30] 2021-09-28 02:26:26,526 | WARNING | no jobs in monitored_payloads queue (waited for 63 s) [2021-09-27 22:26:30] 2021-09-28 02:26:26,641 | INFO | end of generic workflow (traces error code: 0) [2021-09-27 22:26:30] 2021-09-28 02:26:26,641 | INFO | traces error code: 0 [2021-09-27 22:26:30] 2021-09-28 02:26:26,641 | INFO | pilot has finished [2021-09-27 22:26:30] 2021-09-28 02:26:26,924 [wrapper] ==== pilot stdout END ==== [2021-09-27 22:26:30] 2021-09-28 02:26:27,093 [wrapper] ==== wrapper stdout RESUME ==== [2021-09-27 22:26:30] 2021-09-28 02:26:27,158 [wrapper] Pilot exit status: 0 [2021-09-27 22:26:30] 2021-09-28 02:26:27,576 [wrapper] pandaids: 5204050971 [2021-09-27 22:26:30] 2021-09-28 02:26:27,889 [wrapper] apfmon messages muted [2021-09-27 22:26:30] 2021-09-28 02:26:27,960 [wrapper] Test setup, not cleaning [2021-09-27 22:26:30] 2021-09-28 02:26:28,121 [wrapper] ==== wrapper stdout END ==== [2021-09-27 22:26:30] 2021-09-28 02:26:28,309 [wrapper] ==== wrapper stderr END ==== [2021-09-27 22:26:30] 2021-09-28 02:26:28,573 [wrapper] wrapperexiting ec=0, duration=2926 [2021-09-27 22:26:30] 2021-09-28 02:26:28,689 [wrapper] apfmon messages muted [2021-09-27 22:26:30] *** Error codes and diagnostics *** [2021-09-27 22:26:30] "exeErrorCode": 0, [2021-09-27 22:26:30] "exeErrorDiag": "", [2021-09-27 22:26:30] "pilotErrorCode": 0, [2021-09-27 22:26:30] "pilotErrorDiag": "", [2021-09-27 22:26:30] *** Listing of results directory *** [2021-09-27 22:26:30] total 46464 [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 344681 Sep 27 19:22 pilot2.tar.gz [2021-09-27 22:26:30] -rwx------ 1 boinc boinc 20816 Sep 27 20:21 runpilot2-wrapper.sh [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 3214 Sep 27 20:21 queuedata.json [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 107 Sep 27 21:37 wrapper_26015_x86_64-pc-linux-gnu [2021-09-27 22:26:30] -rwxr-xr-x 1 boinc boinc 6966 Sep 27 21:37 run_atlas [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 112 Sep 27 21:37 job.xml [2021-09-27 22:26:30] drwxrwx--x 2 boinc boinc 4096 Sep 27 21:37 shared [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 6168 Sep 27 21:37 init_data.xml [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 0 Sep 27 21:37 boinc_lockfile [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 16541 Sep 27 21:37 start_atlas.sh [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 354550 Sep 27 21:37 input.tar.gz [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 38971704 Sep 27 21:37 EVNT.04972714._000035.pool.root.1 [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 2617 Sep 27 21:37 pandaJob.out [2021-09-27 22:26:30] -rw------- 1 boinc boinc 1080616 Sep 27 21:43 agis_schedconf.cvmfs.json [2021-09-27 22:26:30] -rw------- 1 boinc boinc 1944996 Sep 27 21:43 cric_ddmendpoints.json [2021-09-27 22:26:30] drwx------ 4 boinc boinc 4096 Sep 27 21:43 pilot2 [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 534 Sep 27 22:13 boinc_task_state.xml [2021-09-27 22:26:30] -rw------- 1 boinc boinc 1659380 Sep 27 22:24 output.1.6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.pool.root [2021-09-27 22:26:30] -rw------- 1 boinc boinc 1020 Sep 27 22:25 memory_monitor_summary.json [2021-09-27 22:26:30] -rw------- 1 boinc boinc 542137 Sep 27 22:25 6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log.tgz [2021-09-27 22:26:30] -rw------- 1 boinc boinc 8361 Sep 27 22:25 heartbeat.json [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 25 Sep 27 22:26 wrapper_checkpoint.txt [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 8192 Sep 27 22:26 boinc_mmap_file [2021-09-27 22:26:30] -rw------- 1 boinc boinc 1801 Sep 27 22:26 pilotlog.txt [2021-09-27 22:26:30] -rw------- 1 boinc boinc 131596 Sep 27 22:26 6514fb8e-2d0e-4f95-b496-c5089ebff9ab_75037.1.job.log [2021-09-27 22:26:30] -rw------- 1 boinc boinc 536 Sep 27 22:26 output.list [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 748 Sep 27 22:26 runtime_log [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 9557 Sep 27 22:26 runtime_log.err [2021-09-27 22:26:30] -rw------- 1 boinc boinc 2355200 Sep 27 22:26 result.tar.gz [2021-09-27 22:26:30] -rw------- 1 boinc boinc 564 Sep 27 22:26 P7vMDml3Fpzn7Olcko1bjSoqABFKDmABFKDmZr2WDmBOFKDmONxrWo.diag [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 22409 Sep 27 22:26 stderr.txt [2021-09-27 22:26:30] HITS file was successfully produced: [2021-09-27 22:26:30] -rw------- 1 boinc boinc 1659380 Sep 27 22:24 shared/HITS.pool.root.1 [2021-09-27 22:26:30] *** Contents of shared directory: *** [2021-09-27 22:26:30] total 42352 [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 16541 Sep 27 21:37 start_atlas.sh [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 354550 Sep 27 21:37 input.tar.gz [2021-09-27 22:26:30] -rw-r--r-- 1 boinc boinc 38971704 Sep 27 21:37 ATLAS.root_0 [2021-09-27 22:26:30] -rw------- 1 boinc boinc 1659380 Sep 27 22:24 HITS.pool.root.1 [2021-09-27 22:26:30] -rw------- 1 boinc boinc 2355200 Sep 27 22:26 result.tar.gz 22:26:32 (61576): run_atlas exited; CPU time 439.814759 22:26:32 (61576): called boinc_finish(0) </stderr_txt> ]]>
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