Name | aHyNDmF9Fpzn7Olcko1bjSoqABFKDmABFKDmZr2WDmDOFKDmHu9zgm_0 |
Workunit | 2131643 |
Created | 28 Sep 2021, 0:30:26 UTC |
Sent | 28 Sep 2021, 0:56:59 UTC |
Report deadline | 5 Oct 2021, 0:56:59 UTC |
Received | 28 Sep 2021, 3:08:43 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 15 min 28 sec |
CPU time | 33 min 53 sec |
Validate state | Valid |
Credit | 29.49 |
Device peak FLOPS | 6.11 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.39 GB |
Peak swap size | 28.03 GB |
Peak disk usage | 82.44 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 21:37:33 (61568): wrapper (7.7.26015): starting 21:37:33 (61568): wrapper: running run_atlas (--nthreads 2) [2021-09-27 21:37:33] Arguments: --nthreads 2 [2021-09-27 21:37:33] Threads: 2 [2021-09-27 21:37:33] Checking for CVMFS [2021-09-27 21:37:34] Probing /cvmfs/atlas.cern.ch... OK [2021-09-27 21:37:35] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-09-27 21:37:35] Running cvmfs_config stat atlas.cern.ch [2021-09-27 21:37:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-09-27 21:37:37] 2.9.0.0 147949 10056 68988 92948 3 62 2195562 4194304 7085 130560 0 88275240 99.994 664761 847 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-09-27 21:37:37] CVMFS is ok [2021-09-27 21:37:37] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-09-27 21:37:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-09-27 21:37:37] Small home clusters do not require a local http proxy but it is suggested if [2021-09-27 21:37:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-09-27 21:37:37] Further information can be found at the LHC@home message board. [2021-09-27 21:37:37] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-09-27 21:37:37] Checking for singularity binary... [2021-09-27 21:37:37] Using singularity found in PATH at /usr/local/bin/singularity [2021-09-27 21:37:37] Running /usr/local/bin/singularity --version [2021-09-27 21:37:37] singularity version 3.7.2+10-ga969f0f8c [2021-09-27 21:37:37] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-09-27 21:37:38] E5-2670 [2021-09-27 21:37:38] Singularity works [2021-09-27 21:37:38] Set ATHENA_PROC_NUMBER=2 [2021-09-27 21:37:38] Starting ATLAS job with PandaID=5204053932 [2021-09-27 21:37:38] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/7 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-09-27 22:52:57] *** The last 200 lines of the pilot log: *** [2021-09-27 22:52:57] domain= [2021-09-27 22:52:57] filesize=2076654 [2021-09-27 22:52:57] filetype=output [2021-09-27 22:52:57] guid=8101D809-C6D8-8248-A09C-318B28021DCD [2021-09-27 22:52:57] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK'] [2021-09-27 22:52:57] is_tar=False [2021-09-27 22:52:57] lfn=output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root [2021-09-27 22:52:57] mtime=0 [2021-09-27 22:52:57] protocol_id=None [2021-09-27 22:52:57] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': ' [2021-09-27 22:52:57] replicas=None [2021-09-27 22:52:57] scope=hc_test [2021-09-27 22:52:57] status=None [2021-09-27 22:52:57] status_code=0 [2021-09-27 22:52:57] storage_token= [2021-09-27 22:52:57] surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root [2021-09-27 22:52:57] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/b7/6a/output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root [2021-09-27 22:52:57] workdir=None [2021-09-27 22:52:57] ] [2021-09-27 22:52:57] 2021-09-28 02:51:45,781 | INFO | transferring file output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root from /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/output.1.f7f89c67-3c4a-4c [2021-09-27 22:52:57] 2021-09-28 02:51:45,781 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root /var/lib/boin [2021-09-27 22:52:57] 2021-09-28 02:51:46,086 | INFO | Adding to output.list: output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasda [2021-09-27 22:52:57] 2021-09-28 02:51:46,087 | INFO | executing command: ps aux -q 74598 [2021-09-27 22:52:57] 2021-09-28 02:51:46,421 | INFO | summary of transferred files: [2021-09-27 22:52:57] 2021-09-28 02:51:46,422 | INFO | -- lfn=output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root, status_code=0, status=transferred [2021-09-27 22:52:57] 2021-09-28 02:51:46,422 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932 [2021-09-27 22:52:57] 2021-09-28 02:51:46,925 | WARNING | failed to remove directory: /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root_002 (2, No such file [2021-09-27 22:52:57] 2021-09-28 02:51:46,926 | WARNING | failed to remove directory: /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root_001 (2, No such file [2021-09-27 22:52:57] 2021-09-28 02:51:46,928 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932 [2021-09-27 22:52:57] 2021-09-28 02:51:47,462 | INFO | will create archive /var/lib/boinc-client/slots/7/tarball_PandaJob_5204053932_BOINC-TEST/f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz [2021-09-27 22:52:57] 2021-09-28 02:51:47,462 | INFO | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/7/tarball_PandaJob_5204053932_BOINC-TEST/f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz tarba [2021-09-27 22:52:57] 2021-09-28 02:51:48,322 | INFO | prepare to stage-out 1 log file(s) [2021-09-27 22:52:57] 2021-09-28 02:51:48,322 | INFO | stage-out will not be done in a container [2021-09-27 22:52:57] 2021-09-28 02:51:48,323 | INFO | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']} [2021-09-27 22:52:57] 2021-09-28 02:51:48,323 | INFO | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK'] [2021-09-27 22:52:57] 2021-09-28 02:51:48,323 | INFO | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK [2021-09-27 22:52:57] 2021-09-28 02:51:48,323 | INFO | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default'] [2021-09-27 22:52:57] 2021-09-28 02:51:48,473 | INFO | monitor loop #49: job 0:5204053932 is in state 'stageout' [2021-09-27 22:52:57] 2021-09-28 02:51:48,474 | INFO | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 144366 B [2021-09-27 22:52:57] 2021-09-28 02:51:48,474 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1398955 B [2021-09-27 22:52:57] 2021-09-28 02:51:48,479 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 13339 B [2021-09-27 22:52:57] 2021-09-28 02:51:48,806 | INFO | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l [2021-09-27 22:52:57] 2021-09-28 02:51:48,810 | INFO | ready to transfer (stage-out) files: [ accessmode= [2021-09-27 22:52:57] activity=['pl', 'pw', 'w', 'default'] [2021-09-27 22:52:57] allow_lan=True [2021-09-27 22:52:57] allow_wan=False [2021-09-27 22:52:57] checksum={'adler32': 'c65dc7a5'} [2021-09-27 22:52:57] dataset=hc_test.gangarbt.hc20216392.tid957.BOINC-TEST.137 [2021-09-27 22:52:57] ddm_activity=<filter object at 0x7fd37ac55b50> [2021-09-27 22:52:57] ddmendpoint=NDGF-T1_DATADISK [2021-09-27 22:52:57] direct_access_lan=False [2021-09-27 22:52:57] direct_access_wan=False [2021-09-27 22:52:57] domain= [2021-09-27 22:52:57] filesize=458548 [2021-09-27 22:52:57] filetype=log [2021-09-27 22:52:57] guid=4f121234-4dcb-437f-8467-942012444fcf [2021-09-27 22:52:57] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK'] [2021-09-27 22:52:57] is_tar=False [2021-09-27 22:52:57] lfn=f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz [2021-09-27 22:52:57] mtime=0 [2021-09-27 22:52:57] protocol_id=None [2021-09-27 22:52:57] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': ' [2021-09-27 22:52:57] replicas=None [2021-09-27 22:52:57] scope=hc_test [2021-09-27 22:52:57] status=None [2021-09-27 22:52:57] status_code=0 [2021-09-27 22:52:57] storage_token= [2021-09-27 22:52:57] surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz [2021-09-27 22:52:57] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/30/e4/f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz [2021-09-27 22:52:57] workdir=None [2021-09-27 22:52:57] ] [2021-09-27 22:52:57] 2021-09-28 02:51:48,921 | INFO | sufficient remaining disk space (41679847424 B) [2021-09-27 22:52:57] 2021-09-28 02:51:48,921 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added) [2021-09-27 22:52:57] 2021-09-28 02:51:48,924 | INFO | size of work directory /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932: 3034085 B (within 61362667520 B limit) [2021-09-27 22:52:57] 2021-09-28 02:51:48,924 | INFO | pfn file=/var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/EVNT.04972714._000029.pool.root.1 does not exist (skip from workdir size calculation) [2021-09-27 22:52:57] 2021-09-28 02:51:48,924 | INFO | pfn file=/var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root does not exist (skip from workdir size [2021-09-27 22:52:57] 2021-09-28 02:51:48,924 | INFO | total size of present input+output files: 0 B (workdir size: 3034085 B) [2021-09-27 22:52:57] 2021-09-28 02:51:48,928 | INFO | output file size check: skipping output file /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root sin [2021-09-27 22:52:57] 2021-09-28 02:51:49,127 | INFO | transferring file f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz from /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/f7f89c67-3c4a-4ce4-a4b6-91d147 [2021-09-27 22:52:57] 2021-09-28 02:51:49,130 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz /var/lib/boinc-cli [2021-09-27 22:52:57] 2021-09-28 02:51:49,689 | INFO | number of running child processes to parent process 83424: 1 [2021-09-27 22:52:57] 2021-09-28 02:51:49,689 | INFO | maximum number of monitored processes: 7 [2021-09-27 22:52:57] 2021-09-28 02:51:49,949 | INFO | Adding to output.list: f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadis [2021-09-27 22:52:57] 2021-09-28 02:51:49,950 | INFO | executing command: ps aux -q 74598 [2021-09-27 22:52:57] 2021-09-28 02:51:50,518 | INFO | summary of transferred files: [2021-09-27 22:52:57] 2021-09-28 02:51:50,518 | INFO | -- lfn=f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz, status_code=0, status=transferred [2021-09-27 22:52:57] 2021-09-28 02:51:50,518 | INFO | stage-out finished correctly [2021-09-27 22:52:57] 2021-09-28 02:51:54,197 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2021-09-27 22:52:57] 2021-09-28 02:51:55,241 | INFO | job 5204053932 has state=finished [2021-09-27 22:52:57] 2021-09-28 02:51:55,241 | INFO | preparing for final server update for job 5204053932 in state='finished' [2021-09-27 22:52:57] 2021-09-28 02:51:55,242 | INFO | pilot will not update the server (heartbeat message will be written to file) [2021-09-27 22:52:57] 2021-09-28 02:51:55,242 | INFO | job 5204053932 has finished - writing final server update [2021-09-27 22:52:57] 2021-09-28 02:51:55,244 | INFO | fitting pss+swap vs Time [2021-09-27 22:52:57] 2021-09-28 02:51:55,249 | INFO | current memory leak: -64.20 B/s (using 53 data points, chi2=14229608) [2021-09-27 22:52:57] 2021-09-28 02:51:55,249 | INFO | mean actualcorecount: 4.800000 [2021-09-27 22:52:57] 2021-09-28 02:51:55,249 | INFO | total number of processed events: 2 (read) [2021-09-27 22:52:57] 2021-09-28 02:51:55,274 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-09-27 22:52:57] 2021-09-28 02:51:55,733 | INFO | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-5204053932/memory_monitor_summary.json (trf name=prmon) [2021-09-27 22:52:57] 2021-09-28 02:51:55,738 | INFO | extracted standard info from prmon json [2021-09-27 22:52:57] 2021-09-28 02:51:55,739 | INFO | extracted standard memory fields from prmon json [2021-09-27 22:52:57] 2021-09-28 02:51:55,739 | INFO | .............................. [2021-09-27 22:52:57] 2021-09-28 02:51:55,739 | INFO | . Timing measurements: [2021-09-27 22:52:57] 2021-09-28 02:51:55,739 | INFO | . get job = 0 s [2021-09-27 22:52:57] 2021-09-28 02:51:55,739 | INFO | . initial setup = 5 s [2021-09-27 22:52:57] 2021-09-28 02:51:55,739 | INFO | . payload setup = 252 s [2021-09-27 22:52:57] 2021-09-28 02:51:55,739 | INFO | . total setup = 257 s [2021-09-27 22:52:57] 2021-09-28 02:51:55,740 | INFO | . stage-in = 1 s [2021-09-27 22:52:57] 2021-09-28 02:51:55,740 | INFO | . payload execution = 3805 s [2021-09-27 22:52:57] 2021-09-28 02:51:55,740 | INFO | . stage-out = 5 s [2021-09-27 22:52:57] 2021-09-28 02:51:55,740 | INFO | .............................. [2021-09-27 22:52:57] 2021-09-28 02:51:56,537 | INFO | [2021-09-27 22:52:57] 2021-09-28 02:51:56,537 | INFO | job summary report [2021-09-27 22:52:57] 2021-09-28 02:51:56,537 | INFO | -------------------------------------------------- [2021-09-27 22:52:57] 2021-09-28 02:51:56,537 | INFO | PanDA job id: 5204053932 [2021-09-27 22:52:57] 2021-09-28 02:51:56,537 | INFO | task id: NULL [2021-09-27 22:52:57] 2021-09-28 02:51:56,538 | INFO | errors: (none) [2021-09-27 22:52:57] 2021-09-28 02:51:56,538 | INFO | status: LOG_TRANSFER = DONE [2021-09-27 22:52:57] 2021-09-28 02:51:56,538 | INFO | pilot state: finished [2021-09-27 22:52:57] 2021-09-28 02:51:56,538 | INFO | transexitcode: 0 [2021-09-27 22:52:57] 2021-09-28 02:51:56,538 | INFO | exeerrorcode: 0 [2021-09-27 22:52:57] 2021-09-28 02:51:56,538 | INFO | exeerrordiag: [2021-09-27 22:52:57] 2021-09-28 02:51:56,538 | INFO | exitcode: 0 [2021-09-27 22:52:57] 2021-09-28 02:51:56,539 | INFO | exitmsg: OK [2021-09-27 22:52:57] 2021-09-28 02:51:56,539 | INFO | cpuconsumptiontime: 2222 s [2021-09-27 22:52:57] 2021-09-28 02:51:56,539 | INFO | nevents: 2 [2021-09-27 22:52:57] 2021-09-28 02:51:56,539 | INFO | neventsw: 0 [2021-09-27 22:52:57] 2021-09-28 02:51:56,539 | INFO | pid: 83424 [2021-09-27 22:52:57] 2021-09-28 02:51:56,539 | INFO | pgrp: 83424 [2021-09-27 22:52:57] 2021-09-28 02:51:56,539 | INFO | corecount: 2 [2021-09-27 22:52:57] 2021-09-28 02:51:56,539 | INFO | event service: False [2021-09-27 22:52:57] 2021-09-28 02:51:56,540 | INFO | sizes: {18186647: 3886738, 18186648: 3887902, 18186649: 3888070, 18186650: 3888183, 18186653: 3888349, 18186661: 3888291, 18190724: 3912728, 18190725: 3912727, 181 [2021-09-27 22:52:57] 2021-09-28 02:51:56,540 | INFO | -------------------------------------------------- [2021-09-27 22:52:57] 2021-09-28 02:51:56,540 | INFO | [2021-09-27 22:52:57] 2021-09-28 02:51:56,540 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/7 [2021-09-27 22:52:57] 2021-09-28 02:51:56,913 | INFO | queue jobs has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,913 | INFO | queue payloads has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,913 | INFO | queue data_in has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,913 | INFO | queue data_out has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,913 | INFO | queue current_data_in has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue validated_jobs has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue validated_payloads has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue monitored_payloads has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue finished_jobs has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue finished_payloads has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue finished_data_in has 1 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue finished_data_out has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue failed_jobs has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,914 | INFO | queue failed_payloads has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,915 | INFO | queue failed_data_in has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,915 | INFO | queue failed_data_out has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,915 | INFO | queue completed_jobs has 0 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,915 | INFO | queue completed_jobids has 1 job(s) [2021-09-27 22:52:57] 2021-09-28 02:51:56,915 | INFO | job 5204053932 has completed (purged errors) [2021-09-27 22:52:57] 2021-09-28 02:51:56,915 | INFO | overall cleanup function is called [2021-09-27 22:52:57] 2021-09-28 02:51:57,937 | INFO | --- collectZombieJob: --- 10, [83424] [2021-09-27 22:52:57] 2021-09-28 02:51:57,937 | INFO | zombie collector trying to kill pid 83424 [2021-09-27 22:52:57] 2021-09-28 02:51:57,937 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2021-09-27 22:52:57] 2021-09-28 02:51:58,945 | INFO | collected zombie processes [2021-09-27 22:52:57] 2021-09-28 02:51:58,945 | INFO | will now attempt to kill all subprocesses of pid=83424 [2021-09-27 22:52:57] 2021-09-28 02:51:59,581 | INFO | process IDs to be killed: [83424] (in reverse order) [2021-09-27 22:52:57] 2021-09-28 02:52:00,007 | WARNING | found no corresponding commands to process id(s) [2021-09-27 22:52:57] 2021-09-28 02:52:00,013 | INFO | Do not look for orphan processes in BOINC jobs [2021-09-27 22:52:57] 2021-09-28 02:52:00,013 | INFO | ready for new job [2021-09-27 22:52:57] 2021-09-28 02:52:00,013 | INFO | pilot has finished for previous job - re-establishing logging [2021-09-27 22:52:57] 2021-09-28 02:52:00,017 | INFO | **************************************** [2021-09-27 22:52:57] 2021-09-28 02:52:00,018 | INFO | *** PanDA Pilot version 2.12.6 (1) *** [2021-09-27 22:52:57] 2021-09-28 02:52:00,018 | INFO | **************************************** [2021-09-27 22:52:57] 2021-09-28 02:52:00,018 | INFO | [2021-09-27 22:52:57] 2021-09-28 02:52:00,042 | INFO | architecture information: [2021-09-27 22:52:57] 2021-09-28 02:52:02,026 | INFO | [2021-09-27 22:52:57] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-09-27 22:52:57] Distributor ID: CentOS [2021-09-27 22:52:57] Description: CentOS Linux release 7.8.2003 (Core) [2021-09-27 22:52:57] Release: 7.8.2003 [2021-09-27 22:52:57] Codename: Core [2021-09-27 22:52:57] 2021-09-28 02:52:02,027 | INFO | **************************************** [2021-09-27 22:52:57] 2021-09-28 02:52:02,941 | INFO | sufficient remaining disk space (41681944576 B) [2021-09-27 22:52:57] 2021-09-28 02:52:02,942 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2021-09-27 22:52:57] 2021-09-28 02:52:03,261 | INFO | [monitor] control thread has ended [2021-09-27 22:52:57] 2021-09-28 02:52:03,265 | INFO | [payload] validate_pre thread has finished [2021-09-27 22:52:57] 2021-09-28 02:52:03,993 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2021-09-27 22:52:57] 2021-09-28 02:52:04,081 | INFO | [payload] execute_payloads thread has finished [2021-09-27 22:52:57] 2021-09-28 02:52:04,169 | INFO | [payload] failed_post thread has finished [2021-09-27 22:52:57] 2021-09-28 02:52:04,225 | INFO | [payload] validate_post thread has finished [2021-09-27 22:52:57] 2021-09-28 02:52:05,057 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2021-09-27 22:52:57] 2021-09-28 02:52:05,208 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2021-09-27 22:52:57] 2021-09-28 02:52:51,301 | WARNING | no jobs in monitored_payloads queue (waited for 63 s) [2021-09-27 22:52:57] 2021-09-28 02:52:52,304 | INFO | end of generic workflow (traces error code: 0) [2021-09-27 22:52:57] 2021-09-28 02:52:52,304 | INFO | traces error code: 0 [2021-09-27 22:52:57] 2021-09-28 02:52:52,305 | INFO | pilot has finished [2021-09-27 22:52:57] 2021-09-28 02:52:52,577 [wrapper] ==== pilot stdout END ==== [2021-09-27 22:52:57] 2021-09-28 02:52:52,738 [wrapper] ==== wrapper stdout RESUME ==== [2021-09-27 22:52:57] 2021-09-28 02:52:52,889 [wrapper] Pilot exit status: 0 [2021-09-27 22:52:57] 2021-09-28 02:52:53,721 [wrapper] pandaids: 5204053932 [2021-09-27 22:52:57] 2021-09-28 02:52:54,078 [wrapper] apfmon messages muted [2021-09-27 22:52:57] 2021-09-28 02:52:54,285 [wrapper] Test setup, not cleaning [2021-09-27 22:52:57] 2021-09-28 02:52:54,472 [wrapper] ==== wrapper stdout END ==== [2021-09-27 22:52:57] 2021-09-28 02:52:54,709 [wrapper] ==== wrapper stderr END ==== [2021-09-27 22:52:57] 2021-09-28 02:52:55,329 [wrapper] wrapperexiting ec=0, duration=4512 [2021-09-27 22:52:57] 2021-09-28 02:52:55,761 [wrapper] apfmon messages muted [2021-09-27 22:52:57] *** Error codes and diagnostics *** [2021-09-27 22:52:57] "exeErrorCode": 0, [2021-09-27 22:52:57] "exeErrorDiag": "", [2021-09-27 22:52:57] "pilotErrorCode": 0, [2021-09-27 22:52:57] "pilotErrorDiag": "", [2021-09-27 22:52:57] *** Listing of results directory *** [2021-09-27 22:52:57] total 45908 [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 344681 Sep 27 20:22 pilot2.tar.gz [2021-09-27 22:52:57] -rwx------ 1 boinc boinc 20816 Sep 27 20:27 runpilot2-wrapper.sh [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 3214 Sep 27 20:30 queuedata.json [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 107 Sep 27 21:37 wrapper_26015_x86_64-pc-linux-gnu [2021-09-27 22:52:57] -rwxr-xr-x 1 boinc boinc 6966 Sep 27 21:37 run_atlas [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 112 Sep 27 21:37 job.xml [2021-09-27 22:52:57] drwxrwx--x 2 boinc boinc 4096 Sep 27 21:37 shared [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 6167 Sep 27 21:37 init_data.xml [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 0 Sep 27 21:37 boinc_lockfile [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 16541 Sep 27 21:37 start_atlas.sh [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 354550 Sep 27 21:37 input.tar.gz [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 37658468 Sep 27 21:37 EVNT.04972714._000029.pool.root.1 [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 2616 Sep 27 21:37 pandaJob.out [2021-09-27 22:52:57] -rw------- 1 boinc boinc 1080616 Sep 27 21:43 agis_schedconf.cvmfs.json [2021-09-27 22:52:57] -rw------- 1 boinc boinc 1944996 Sep 27 21:43 cric_ddmendpoints.json [2021-09-27 22:52:57] drwx------ 4 boinc boinc 4096 Sep 27 21:43 pilot2 [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 535 Sep 27 22:31 boinc_task_state.xml [2021-09-27 22:52:57] -rw------- 1 boinc boinc 2076654 Sep 27 22:51 output.1.f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.pool.root [2021-09-27 22:52:57] -rw------- 1 boinc boinc 1023 Sep 27 22:51 memory_monitor_summary.json [2021-09-27 22:52:57] -rw------- 1 boinc boinc 458548 Sep 27 22:51 f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log.tgz [2021-09-27 22:52:57] -rw------- 1 boinc boinc 7225 Sep 27 22:51 heartbeat.json [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 8192 Sep 27 22:52 boinc_mmap_file [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 26 Sep 27 22:52 wrapper_checkpoint.txt [2021-09-27 22:52:57] -rw------- 1 boinc boinc 1801 Sep 27 22:52 pilotlog.txt [2021-09-27 22:52:57] -rw------- 1 boinc boinc 175580 Sep 27 22:52 f7f89c67-3c4a-4ce4-a4b6-91d147140c10_11445.1.job.log [2021-09-27 22:52:57] -rw------- 1 boinc boinc 536 Sep 27 22:52 output.list [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 748 Sep 27 22:52 runtime_log [2021-09-27 22:52:57] -rw------- 1 boinc boinc 2734080 Sep 27 22:52 result.tar.gz [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 9541 Sep 27 22:52 runtime_log.err [2021-09-27 22:52:57] -rw------- 1 boinc boinc 565 Sep 27 22:52 aHyNDmF9Fpzn7Olcko1bjSoqABFKDmABFKDmZr2WDmDOFKDmHu9zgm.diag [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 22399 Sep 27 22:52 stderr.txt [2021-09-27 22:52:57] HITS file was successfully produced: [2021-09-27 22:52:57] -rw------- 1 boinc boinc 2076654 Sep 27 22:51 shared/HITS.pool.root.1 [2021-09-27 22:52:57] *** Contents of shared directory: *** [2021-09-27 22:52:57] total 41844 [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 37658468 Sep 27 21:37 ATLAS.root_0 [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 16541 Sep 27 21:37 start_atlas.sh [2021-09-27 22:52:57] -rw-r--r-- 1 boinc boinc 354550 Sep 27 21:37 input.tar.gz [2021-09-27 22:52:57] -rw------- 1 boinc boinc 2076654 Sep 27 22:51 HITS.pool.root.1 [2021-09-27 22:52:57] -rw------- 1 boinc boinc 2734080 Sep 27 22:52 result.tar.gz 22:52:59 (61568): run_atlas exited; CPU time 2033.846933 22:52:59 (61568): called boinc_finish(0) </stderr_txt> ]]>
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