Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
01:28:50 (128684): wrapper (7.7.26015): starting
01:28:50 (128684): wrapper: running run_atlas (--nthreads 2)
[2021-09-28 01:28:50] Arguments: --nthreads 2
[2021-09-28 01:28:50] Threads: 2
[2021-09-28 01:28:50] Checking for CVMFS
[2021-09-28 01:28:51] Probing /cvmfs/atlas.cern.ch... OK
[2021-09-28 01:28:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-09-28 01:28:54] Running cvmfs_config stat atlas.cern.ch
[2021-09-28 01:28:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-09-28 01:28:55] 2.9.0.0 147949 10287 69284 92958 0 58 2447992 4194304 7680 130560 0 90431767 99.993 737059 901 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-09-28 01:28:55] CVMFS is ok
[2021-09-28 01:28:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-09-28 01:28:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-09-28 01:28:56] Small home clusters do not require a local http proxy but it is suggested if
[2021-09-28 01:28:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-09-28 01:28:56] Further information can be found at the LHC@home message board.
[2021-09-28 01:28:56] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-09-28 01:28:56] Checking for singularity binary...
[2021-09-28 01:28:56] Using singularity found in PATH at /usr/local/bin/singularity
[2021-09-28 01:28:56] Running /usr/local/bin/singularity --version
[2021-09-28 01:28:56] singularity version 3.7.2+10-ga969f0f8c
[2021-09-28 01:28:56] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-09-28 01:28:57] E5-2670
[2021-09-28 01:28:57] Singularity works
[2021-09-28 01:28:57] Set ATHENA_PROC_NUMBER=2
[2021-09-28 01:28:58] Starting ATLAS job with PandaID=5204204702
[2021-09-28 01:28:58] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/11 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-09-28 02:59:27]  *** The last 200 lines of the pilot log: ***
[2021-09-28 02:59:27]  domain=
[2021-09-28 02:59:27]  filesize=2076648
[2021-09-28 02:59:27]  filetype=output
[2021-09-28 02:59:27]  guid=E9C36E9C-B44D-B344-9420-F24475F38FDD
[2021-09-28 02:59:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-28 02:59:27]  is_tar=False
[2021-09-28 02:59:27]  lfn=output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root
[2021-09-28 02:59:27]  mtime=0
[2021-09-28 02:59:27]  protocol_id=None
[2021-09-28 02:59:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-28 02:59:27]  replicas=None
[2021-09-28 02:59:27]  scope=hc_test
[2021-09-28 02:59:27]  status=None
[2021-09-28 02:59:27]  status_code=0
[2021-09-28 02:59:27]  storage_token=
[2021-09-28 02:59:27]  surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root
[2021-09-28 02:59:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/f8/e3/output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root
[2021-09-28 02:59:27]  workdir=None
[2021-09-28 02:59:27] ]
[2021-09-28 02:59:27] 2021-09-28 06:58:18,293 | INFO     | transferring file output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root from /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/output.1.a9a7941a-8801-4
[2021-09-28 02:59:27] 2021-09-28 06:58:18,294 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root /var/lib/boi
[2021-09-28 02:59:27] 2021-09-28 06:58:18,791 | INFO     | Adding to output.list: output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasda
[2021-09-28 02:59:27] 2021-09-28 06:58:18,797 | INFO     | executing command: ps aux -q 136813
[2021-09-28 02:59:27] 2021-09-28 06:58:19,045 | INFO     | monitor loop #60: job 0:5204204702 is in state 'stageout'
[2021-09-28 02:59:27] 2021-09-28 06:58:19,046 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 146579 B
[2021-09-28 02:59:27] 2021-09-28 06:58:19,046 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 1410800 B
[2021-09-28 02:59:27] 2021-09-28 06:58:19,046 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13121 B
[2021-09-28 02:59:27] 2021-09-28 06:58:19,325 | INFO     | summary of transferred files:
[2021-09-28 02:59:27] 2021-09-28 06:58:19,333 | INFO     |  -- lfn=output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root, status_code=0, status=transferred
[2021-09-28 02:59:27] 2021-09-28 06:58:19,334 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702
[2021-09-28 02:59:27] 2021-09-28 06:58:19,406 | INFO     | sufficient remaining disk space (40534802432 B)
[2021-09-28 02:59:27] 2021-09-28 06:58:19,406 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2021-09-28 02:59:27] 2021-09-28 06:58:19,413 | INFO     | size of work directory /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702: 4722984 B (within 61362667520 B limit)
[2021-09-28 02:59:27] 2021-09-28 06:58:19,413 | INFO     | pfn file=/var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root does not exist (skip from workdir size
[2021-09-28 02:59:27] 2021-09-28 06:58:19,413 | INFO     | total size of present input+output files: 37658468 B (workdir size: 4722984 B)
[2021-09-28 02:59:27] 2021-09-28 06:58:19,413 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root si
[2021-09-28 02:59:27] 2021-09-28 06:58:19,817 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root_001 (2, No such fil
[2021-09-28 02:59:27] 2021-09-28 06:58:19,817 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root_002 (2, No such fil
[2021-09-28 02:59:27] 2021-09-28 06:58:19,819 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702
[2021-09-28 02:59:27] 2021-09-28 06:58:20,171 | INFO     | number of running child processes to parent process 142220: 1
[2021-09-28 02:59:27] 2021-09-28 06:58:20,171 | INFO     | maximum number of monitored processes: 10
[2021-09-28 02:59:27] 2021-09-28 06:58:20,320 | INFO     | will create archive /var/lib/boinc-client/slots/11/tarball_PandaJob_5204204702_BOINC-TEST/a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz
[2021-09-28 02:59:27] 2021-09-28 06:58:20,322 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/11/tarball_PandaJob_5204204702_BOINC-TEST/a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz tarb
[2021-09-28 02:59:27] 2021-09-28 06:58:21,165 | INFO     | prepare to stage-out 1 log file(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:21,166 | INFO     | stage-out will not be done in a container
[2021-09-28 02:59:27] 2021-09-28 06:58:21,166 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2021-09-28 02:59:27] 2021-09-28 06:58:21,167 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2021-09-28 02:59:27] 2021-09-28 06:58:21,167 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2021-09-28 02:59:27] 2021-09-28 06:58:21,167 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2021-09-28 02:59:27] 2021-09-28 06:58:21,676 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-09-28 02:59:27] 2021-09-28 06:58:21,677 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-09-28 02:59:27]  activity=['pl', 'pw', 'w', 'default']
[2021-09-28 02:59:27]  allow_lan=True
[2021-09-28 02:59:27]  allow_wan=False
[2021-09-28 02:59:27]  checksum={'adler32': '180e26dd'}
[2021-09-28 02:59:27]  dataset=hc_test.gangarbt.hc20216578.tid1036.BOINC-TEST.122
[2021-09-28 02:59:27]  ddm_activity=<filter object at 0x7fc6bee69710>
[2021-09-28 02:59:27]  ddmendpoint=NDGF-T1_DATADISK
[2021-09-28 02:59:27]  direct_access_lan=False
[2021-09-28 02:59:27]  direct_access_wan=False
[2021-09-28 02:59:27]  domain=
[2021-09-28 02:59:27]  filesize=463195
[2021-09-28 02:59:27]  filetype=log
[2021-09-28 02:59:27]  guid=f562e003-93e7-45e3-8e3d-ee643ca7d9da
[2021-09-28 02:59:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-09-28 02:59:27]  is_tar=False
[2021-09-28 02:59:27]  lfn=a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz
[2021-09-28 02:59:27]  mtime=0
[2021-09-28 02:59:27]  protocol_id=None
[2021-09-28 02:59:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-09-28 02:59:27]  replicas=None
[2021-09-28 02:59:27]  scope=hc_test
[2021-09-28 02:59:27]  status=None
[2021-09-28 02:59:27]  status_code=0
[2021-09-28 02:59:27]  storage_token=
[2021-09-28 02:59:27]  surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz
[2021-09-28 02:59:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/39/94/a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz
[2021-09-28 02:59:27]  workdir=None
[2021-09-28 02:59:27] ]
[2021-09-28 02:59:27] 2021-09-28 06:58:21,934 | INFO     | transferring file a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz from /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/a9a7941a-8801-4ceb-9097-2ccb6
[2021-09-28 02:59:27] 2021-09-28 06:58:21,941 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz /var/lib/boinc-cl
[2021-09-28 02:59:27] 2021-09-28 06:58:22,425 | INFO     | Adding to output.list: a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadis
[2021-09-28 02:59:27] 2021-09-28 06:58:22,426 | INFO     | executing command: ps aux -q 136813
[2021-09-28 02:59:27] 2021-09-28 06:58:22,905 | INFO     | summary of transferred files:
[2021-09-28 02:59:27] 2021-09-28 06:58:22,906 | INFO     |  -- lfn=a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz, status_code=0, status=transferred
[2021-09-28 02:59:27] 2021-09-28 06:58:22,906 | INFO     | stage-out finished correctly
[2021-09-28 02:59:27] 2021-09-28 06:58:23,301 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2021-09-28 02:59:27] 2021-09-28 06:58:26,697 | INFO     | job 5204204702 has state=finished
[2021-09-28 02:59:27] 2021-09-28 06:58:26,697 | INFO     | preparing for final server update for job 5204204702 in state='finished'
[2021-09-28 02:59:27] 2021-09-28 06:58:26,698 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2021-09-28 02:59:27] 2021-09-28 06:58:26,698 | INFO     | job 5204204702 has finished - writing final server update
[2021-09-28 02:59:27] 2021-09-28 06:58:26,698 | INFO     | will not add max space = -32935484 B to job metrics
[2021-09-28 02:59:27] 2021-09-28 06:58:26,700 | INFO     | fitting pss+swap vs Time
[2021-09-28 02:59:27] 2021-09-28 06:58:26,705 | INFO     | current memory leak: -14.87 B/s (using 69 data points, chi2=14783685)
[2021-09-28 02:59:27] 2021-09-28 06:58:26,705 | INFO     | mean actualcorecount: 4.771930
[2021-09-28 02:59:27] 2021-09-28 06:58:26,705 | INFO     | total number of processed events: 2 (read)
[2021-09-28 02:59:27] 2021-09-28 06:58:26,726 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-09-28 02:59:27] 2021-09-28 06:58:27,133 | INFO     | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-5204204702/memory_monitor_summary.json (trf name=prmon)
[2021-09-28 02:59:27] 2021-09-28 06:58:27,135 | INFO     | extracted standard info from prmon json
[2021-09-28 02:59:27] 2021-09-28 06:58:27,136 | INFO     | extracted standard memory fields from prmon json
[2021-09-28 02:59:27] 2021-09-28 06:58:27,136 | INFO     | ..............................
[2021-09-28 02:59:27] 2021-09-28 06:58:27,136 | INFO     | . Timing measurements:
[2021-09-28 02:59:27] 2021-09-28 06:58:27,136 | INFO     | . get job = 0 s
[2021-09-28 02:59:27] 2021-09-28 06:58:27,136 | INFO     | . initial setup = 5 s
[2021-09-28 02:59:27] 2021-09-28 06:58:27,136 | INFO     | . payload setup = 237 s
[2021-09-28 02:59:27] 2021-09-28 06:58:27,145 | INFO     | . total setup = 242 s
[2021-09-28 02:59:27] 2021-09-28 06:58:27,145 | INFO     | . stage-in = 1 s
[2021-09-28 02:59:27] 2021-09-28 06:58:27,145 | INFO     | . payload execution = 4769 s
[2021-09-28 02:59:27] 2021-09-28 06:58:27,145 | INFO     | . stage-out = 5 s
[2021-09-28 02:59:27] 2021-09-28 06:58:27,145 | INFO     | ..............................
[2021-09-28 02:59:27] 2021-09-28 06:58:27,681 | INFO     | 
[2021-09-28 02:59:27] 2021-09-28 06:58:27,681 | INFO     | job summary report
[2021-09-28 02:59:27] 2021-09-28 06:58:27,681 | INFO     | --------------------------------------------------
[2021-09-28 02:59:27] 2021-09-28 06:58:27,681 | INFO     | PanDA job id: 5204204702
[2021-09-28 02:59:27] 2021-09-28 06:58:27,681 | INFO     | task id: NULL
[2021-09-28 02:59:27] 2021-09-28 06:58:27,682 | INFO     | errors: (none)
[2021-09-28 02:59:27] 2021-09-28 06:58:27,682 | INFO     | status: LOG_TRANSFER = DONE 
[2021-09-28 02:59:27] 2021-09-28 06:58:27,682 | INFO     | pilot state: finished 
[2021-09-28 02:59:27] 2021-09-28 06:58:27,682 | INFO     | transexitcode: 0
[2021-09-28 02:59:27] 2021-09-28 06:58:27,682 | INFO     | exeerrorcode: 0
[2021-09-28 02:59:27] 2021-09-28 06:58:27,682 | INFO     | exeerrordiag: 
[2021-09-28 02:59:27] 2021-09-28 06:58:27,682 | INFO     | exitcode: 0
[2021-09-28 02:59:27] 2021-09-28 06:58:27,682 | INFO     | exitmsg: OK
[2021-09-28 02:59:27] 2021-09-28 06:58:27,683 | INFO     | cpuconsumptiontime: 2361 s
[2021-09-28 02:59:27] 2021-09-28 06:58:27,683 | INFO     | nevents: 2
[2021-09-28 02:59:27] 2021-09-28 06:58:27,683 | INFO     | neventsw: 0
[2021-09-28 02:59:27] 2021-09-28 06:58:27,683 | INFO     | pid: 142220
[2021-09-28 02:59:27] 2021-09-28 06:58:27,683 | INFO     | pgrp: 142220
[2021-09-28 02:59:27] 2021-09-28 06:58:27,683 | INFO     | corecount: 2
[2021-09-28 02:59:27] 2021-09-28 06:58:27,683 | INFO     | event service: False
[2021-09-28 02:59:27] 2021-09-28 06:58:27,684 | INFO     | sizes: {18200490: 3886609, 18200491: 3887886, 18200492: 3887999, 18200493: 3887999, 18200495: 3888221, 18200504: 3888163, 18205517: 3914514, 18205523: 3924040, 182
[2021-09-28 02:59:27] 2021-09-28 06:58:27,684 | INFO     | --------------------------------------------------
[2021-09-28 02:59:27] 2021-09-28 06:58:27,684 | INFO     | 
[2021-09-28 02:59:27] 2021-09-28 06:58:27,684 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11
[2021-09-28 02:59:27] 2021-09-28 06:58:28,155 | INFO     | queue jobs has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,155 | INFO     | queue payloads has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,155 | INFO     | queue data_in has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,155 | INFO     | queue data_out has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,156 | INFO     | queue current_data_in has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,156 | INFO     | queue validated_jobs has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,156 | INFO     | queue validated_payloads has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,156 | INFO     | queue monitored_payloads has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,156 | INFO     | queue finished_jobs has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,156 | INFO     | queue finished_payloads has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,156 | INFO     | queue finished_data_in has 1 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,156 | INFO     | queue finished_data_out has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,161 | INFO     | queue failed_jobs has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,161 | INFO     | queue failed_payloads has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,161 | INFO     | queue failed_data_in has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,161 | INFO     | queue failed_data_out has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,161 | INFO     | queue completed_jobs has 0 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,161 | INFO     | queue completed_jobids has 1 job(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,161 | INFO     | job 5204204702 has completed (purged errors)
[2021-09-28 02:59:27] 2021-09-28 06:58:28,162 | INFO     | overall cleanup function is called
[2021-09-28 02:59:27] 2021-09-28 06:58:29,177 | INFO     | --- collectZombieJob: --- 10, [142220]
[2021-09-28 02:59:27] 2021-09-28 06:58:29,177 | INFO     | zombie collector trying to kill pid 142220
[2021-09-28 02:59:27] 2021-09-28 06:58:29,177 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-09-28 02:59:27] 2021-09-28 06:58:30,185 | INFO     | collected zombie processes
[2021-09-28 02:59:27] 2021-09-28 06:58:30,185 | INFO     | will now attempt to kill all subprocesses of pid=142220
[2021-09-28 02:59:27] 2021-09-28 06:58:30,749 | INFO     | process IDs to be killed: [142220] (in reverse order)
[2021-09-28 02:59:27] 2021-09-28 06:58:31,195 | WARNING  | found no corresponding commands to process id(s)
[2021-09-28 02:59:27] 2021-09-28 06:58:31,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2021-09-28 02:59:27] 2021-09-28 06:58:31,196 | INFO     | ready for new job
[2021-09-28 02:59:27] 2021-09-28 06:58:31,196 | INFO     | pilot has finished for previous job - re-establishing logging
[2021-09-28 02:59:27] 2021-09-28 06:58:31,201 | INFO     | ****************************************
[2021-09-28 02:59:27] 2021-09-28 06:58:31,201 | INFO     | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-09-28 02:59:27] 2021-09-28 06:58:31,202 | INFO     | ****************************************
[2021-09-28 02:59:27] 2021-09-28 06:58:31,202 | INFO     | 
[2021-09-28 02:59:27] 2021-09-28 06:58:31,226 | INFO     | architecture information:
[2021-09-28 02:59:27] 2021-09-28 06:58:33,669 | INFO     | 
[2021-09-28 02:59:27] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-09-28 02:59:27] Distributor ID:	CentOS
[2021-09-28 02:59:27] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-09-28 02:59:27] Release:	7.8.2003
[2021-09-28 02:59:27] Codename:	Core
[2021-09-28 02:59:27] 2021-09-28 06:58:33,670 | INFO     | ****************************************
[2021-09-28 02:59:27] 2021-09-28 06:58:34,533 | INFO     | sufficient remaining disk space (40537948160 B)
[2021-09-28 02:59:27] 2021-09-28 06:58:34,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2021-09-28 02:59:27] 2021-09-28 06:58:34,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-09-28 02:59:27] 2021-09-28 06:58:34,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2021-09-28 02:59:27] 2021-09-28 06:58:34,825 | INFO     | [monitor] control thread has ended
[2021-09-28 02:59:27] 2021-09-28 06:58:35,001 | INFO     | [payload] validate_post thread has finished
[2021-09-28 02:59:27] 2021-09-28 06:58:35,125 | INFO     | [payload] validate_pre thread has finished
[2021-09-28 02:59:27] 2021-09-28 06:58:35,149 | INFO     | [payload] execute_payloads thread has finished
[2021-09-28 02:59:27] 2021-09-28 06:58:35,533 | INFO     | [payload] failed_post thread has finished
[2021-09-28 02:59:27] 2021-09-28 06:58:36,721 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2021-09-28 02:59:27] 2021-09-28 06:59:21,873 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
[2021-09-28 02:59:27] 2021-09-28 06:59:22,789 | INFO     | end of generic workflow (traces error code: 0)
[2021-09-28 02:59:27] 2021-09-28 06:59:22,789 | INFO     | traces error code: 0
[2021-09-28 02:59:27] 2021-09-28 06:59:22,790 | INFO     | pilot has finished
[2021-09-28 02:59:27] 2021-09-28 06:59:23,105 [wrapper] ==== pilot stdout END ====
[2021-09-28 02:59:27] 2021-09-28 06:59:23,329 [wrapper] ==== wrapper stdout RESUME ====
[2021-09-28 02:59:27] 2021-09-28 06:59:23,509 [wrapper] Pilot exit status: 0
[2021-09-28 02:59:27] 2021-09-28 06:59:24,221 [wrapper] pandaids: 5204204702
[2021-09-28 02:59:27] 2021-09-28 06:59:24,573 [wrapper] apfmon messages muted
[2021-09-28 02:59:27] 2021-09-28 06:59:24,714 [wrapper] Test setup, not cleaning
[2021-09-28 02:59:27] 2021-09-28 06:59:24,909 [wrapper] ==== wrapper stdout END ====
[2021-09-28 02:59:27] 2021-09-28 06:59:25,037 [wrapper] ==== wrapper stderr END ====
[2021-09-28 02:59:27] 2021-09-28 06:59:25,512 [wrapper] wrapperexiting ec=0, duration=5423
[2021-09-28 02:59:27] 2021-09-28 06:59:25,641 [wrapper] apfmon messages muted
[2021-09-28 02:59:27]  *** Error codes and diagnostics ***
[2021-09-28 02:59:27]     "exeErrorCode": 0,
[2021-09-28 02:59:27]     "exeErrorDiag": "",
[2021-09-28 02:59:27]     "pilotErrorCode": 0,
[2021-09-28 02:59:27]     "pilotErrorDiag": "",
[2021-09-28 02:59:27]  *** Listing of results directory ***
[2021-09-28 02:59:27] total 45972
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc   344681 Sep 27 23:25 pilot2.tar.gz
[2021-09-28 02:59:27] -rwx------ 1 boinc boinc    20631 Sep 28 00:05 runpilot2-wrapper.sh
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc     3214 Sep 28 00:05 queuedata.json
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc      107 Sep 28 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2021-09-28 02:59:27] -rwxr-xr-x 1 boinc boinc     6966 Sep 28 01:28 run_atlas
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc      112 Sep 28 01:28 job.xml
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc     6168 Sep 28 01:28 init_data.xml
[2021-09-28 02:59:27] drwxrwx--x 2 boinc boinc     4096 Sep 28 01:28 shared
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc        0 Sep 28 01:28 boinc_lockfile
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc    16573 Sep 28 01:28 start_atlas.sh
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc   354494 Sep 28 01:28 input.tar.gz
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc 37658468 Sep 28 01:28 EVNT.04972714._000029.pool.root.1
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc     2613 Sep 28 01:28 pandaJob.out
[2021-09-28 02:59:27] -rw------- 1 boinc boinc  1080616 Sep 28 01:34 agis_schedconf.cvmfs.json
[2021-09-28 02:59:27] -rw------- 1 boinc boinc  1944996 Sep 28 01:34 cric_ddmendpoints.json
[2021-09-28 02:59:27] drwx------ 4 boinc boinc     4096 Sep 28 01:34 pilot2
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc      535 Sep 28 02:36 boinc_task_state.xml
[2021-09-28 02:59:27] -rw------- 1 boinc boinc  2076648 Sep 28 02:57 output.1.a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.pool.root
[2021-09-28 02:59:27] -rw------- 1 boinc boinc     1022 Sep 28 02:58 memory_monitor_summary.json
[2021-09-28 02:59:27] -rw------- 1 boinc boinc   463195 Sep 28 02:58 a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log.tgz
[2021-09-28 02:59:27] -rw------- 1 boinc boinc     7895 Sep 28 02:58 heartbeat.json
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc     8192 Sep 28 02:59 boinc_mmap_file
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc       26 Sep 28 02:59 wrapper_checkpoint.txt
[2021-09-28 02:59:27] -rw------- 1 boinc boinc     1801 Sep 28 02:59 pilotlog.txt
[2021-09-28 02:59:27] -rw------- 1 boinc boinc   202217 Sep 28 02:59 a9a7941a-8801-4ceb-9097-2ccb6541cb97_19521.1.job.log
[2021-09-28 02:59:27] -rw------- 1 boinc boinc      536 Sep 28 02:59 output.list
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc      748 Sep 28 02:59 runtime_log
[2021-09-28 02:59:27] -rw------- 1 boinc boinc  2764800 Sep 28 02:59 result.tar.gz
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc     9569 Sep 28 02:59 runtime_log.err
[2021-09-28 02:59:27] -rw------- 1 boinc boinc      566 Sep 28 02:59 DvwMDmpXJpzn7Olcko1bjSoqABFKDmABFKDmZr2WDmNOFKDmaGMcUn.diag
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc    22332 Sep 28 02:59 stderr.txt
[2021-09-28 02:59:27] HITS file was successfully produced:
[2021-09-28 02:59:27] -rw------- 1 boinc boinc 2076648 Sep 28 02:57 shared/HITS.pool.root.1
[2021-09-28 02:59:27]  *** Contents of shared directory: ***
[2021-09-28 02:59:27] total 41872
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc 37658468 Sep 28 01:28 ATLAS.root_0
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc    16573 Sep 28 01:28 start_atlas.sh
[2021-09-28 02:59:27] -rw-r--r-- 1 boinc boinc   354494 Sep 28 01:28 input.tar.gz
[2021-09-28 02:59:27] -rw------- 1 boinc boinc  2076648 Sep 28 02:57 HITS.pool.root.1
[2021-09-28 02:59:27] -rw------- 1 boinc boinc  2764800 Sep 28 02:59 result.tar.gz
02:59:29 (128684): run_atlas exited; CPU time 2120.969709
02:59:29 (128684): called boinc_finish(0)

</stderr_txt>
]]>

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