Name X21MDmiEaqzn7Olcko1bjSoqABFKDmABFKDmZr2WDmvSFKDmcEkqKn_0
Workunit 2132324
Created 1 Oct 2021, 16:06:46 UTC
Sent 1 Oct 2021, 16:12:29 UTC
Report deadline 8 Oct 2021, 16:12:29 UTC
Received 1 Oct 2021, 19:18:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 1 hours 12 min 50 sec
CPU time 20 min 46 sec
Validate state Valid
Credit 24.28
Device peak FLOPS 6.11 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.40 GB
Peak swap size 27.40 GB
Peak disk usage 81.13 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
13:04:35 (5007): wrapper (7.7.26015): starting
13:04:35 (5007): wrapper: running run_atlas (--nthreads 2)
[2021-10-01 13:04:35] Arguments: --nthreads 2
[2021-10-01 13:04:35] Threads: 2
[2021-10-01 13:04:35] Checking for CVMFS
[2021-10-01 13:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2021-10-01 13:04:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-10-01 13:04:37] Running cvmfs_config stat atlas.cern.ch
[2021-10-01 13:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-10-01 13:04:39] 2.9.0.0 147949 15303 69668 93177 0 62 2286069 4194304 7128 130560 0 135172565 99.995 941779 864 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-10-01 13:04:39] CVMFS is ok
[2021-10-01 13:04:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-10-01 13:04:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-10-01 13:04:39] Small home clusters do not require a local http proxy but it is suggested if
[2021-10-01 13:04:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-10-01 13:04:39] Further information can be found at the LHC@home message board.
[2021-10-01 13:04:39] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-10-01 13:04:39] Checking for singularity binary...
[2021-10-01 13:04:39] Using singularity found in PATH at /usr/local/bin/singularity
[2021-10-01 13:04:39] Running /usr/local/bin/singularity --version
[2021-10-01 13:04:39] singularity version 3.7.2+10-ga969f0f8c
[2021-10-01 13:04:39] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-10-01 13:04:41] E5-2670
[2021-10-01 13:04:41] Singularity works
[2021-10-01 13:04:41] Set ATHENA_PROC_NUMBER=2
[2021-10-01 13:04:41] Starting ATLAS job with PandaID=5207856713
[2021-10-01 13:04:41] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/2 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-10-01 14:17:23]  *** The last 200 lines of the pilot log: ***
[2021-10-01 14:17:23] 2021-10-01 18:16:53,184 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-10-01 14:17:23] 2021-10-01 18:16:53,201 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-10-01 14:17:23]  activity=['pw', 'w', 'default']
[2021-10-01 14:17:23]  allow_lan=True
[2021-10-01 14:17:23]  allow_wan=False
[2021-10-01 14:17:23]  checksum={'adler32': 'd5d873d0'}
[2021-10-01 14:17:23]  dataset=hc_test.gangarbt.hc20219856.tid957.BOINC-TEST.40
[2021-10-01 14:17:23]  ddm_activity=<filter object at 0x7fe3d053e1d0>
[2021-10-01 14:17:23]  ddmendpoint=NDGF-T1_DATADISK
[2021-10-01 14:17:23]  direct_access_lan=False
[2021-10-01 14:17:23]  direct_access_wan=False
[2021-10-01 14:17:23]  domain=
[2021-10-01 14:17:23]  filesize=1541940
[2021-10-01 14:17:23]  filetype=output
[2021-10-01 14:17:23]  guid=B4F1203C-2484-8640-BC02-FC4A3672A188
[2021-10-01 14:17:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-10-01 14:17:23]  is_tar=False
[2021-10-01 14:17:23]  lfn=Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.root
[2021-10-01 14:17:23]  mtime=0
[2021-10-01 14:17:23]  protocol_id=None
[2021-10-01 14:17:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-10-01 14:17:23]  replicas=None
[2021-10-01 14:17:23]  scope=hc_test
[2021-10-01 14:17:23]  status=None
[2021-10-01 14:17:23]  status_code=0
[2021-10-01 14:17:23]  storage_token=
[2021-10-01 14:17:23]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.root
[2021-10-01 14:17:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/5c/02/Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.root
[2021-10-01 14:17:23]  workdir=None
[2021-10-01 14:17:23] ]
[2021-10-01 14:17:23] 2021-10-01 18:16:53,474 | INFO     | transferring file Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.root from /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/Hi
[2021-10-01 14:17:23] 2021-10-01 18:16:53,475 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.
[2021-10-01 14:17:23] 2021-10-01 18:16:53,911 | INFO     | Adding to output.list: Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATA
[2021-10-01 14:17:23] 2021-10-01 18:16:53,912 | INFO     | executing command: ps aux -q 13123
[2021-10-01 14:17:23] 2021-10-01 18:16:54,093 | INFO     | summary of transferred files:
[2021-10-01 14:17:23] 2021-10-01 18:16:54,094 | INFO     |  -- lfn=Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.root, status_code=0, status=transferred
[2021-10-01 14:17:23] 2021-10-01 18:16:54,094 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713
[2021-10-01 14:17:23] 2021-10-01 18:16:54,671 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.ro
[2021-10-01 14:17:23] 2021-10-01 18:16:54,672 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.ro
[2021-10-01 14:17:23] 2021-10-01 18:16:54,674 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713
[2021-10-01 14:17:23] 2021-10-01 18:16:55,211 | INFO     | will create archive /var/lib/boinc-client/slots/2/tarball_PandaJob_5207856713_BOINC-TEST/06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz
[2021-10-01 14:17:23] 2021-10-01 18:16:55,212 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/2/tarball_PandaJob_5207856713_BOINC-TEST/06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz tarball_
[2021-10-01 14:17:23] 2021-10-01 18:16:55,993 | INFO     | prepare to stage-out 1 log file(s)
[2021-10-01 14:17:23] 2021-10-01 18:16:55,994 | INFO     | stage-out will not be done in a container
[2021-10-01 14:17:23] 2021-10-01 18:16:56,001 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2021-10-01 14:17:23] 2021-10-01 18:16:56,001 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2021-10-01 14:17:23] 2021-10-01 18:16:56,001 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2021-10-01 14:17:23] 2021-10-01 18:16:56,001 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2021-10-01 14:17:23] 2021-10-01 18:16:56,550 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-10-01 14:17:23] 2021-10-01 18:16:56,551 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-10-01 14:17:23]  activity=['pl', 'pw', 'w', 'default']
[2021-10-01 14:17:23]  allow_lan=True
[2021-10-01 14:17:23]  allow_wan=False
[2021-10-01 14:17:23]  checksum={'adler32': '67064f48'}
[2021-10-01 14:17:23]  dataset=hc_test.gangarbt.hc20219856.tid957.BOINC-TEST.40
[2021-10-01 14:17:23]  ddm_activity=<filter object at 0x7fe3d4c00fd0>
[2021-10-01 14:17:23]  ddmendpoint=NDGF-T1_DATADISK
[2021-10-01 14:17:23]  direct_access_lan=False
[2021-10-01 14:17:23]  direct_access_wan=False
[2021-10-01 14:17:23]  domain=
[2021-10-01 14:17:23]  filesize=457983
[2021-10-01 14:17:23]  filetype=log
[2021-10-01 14:17:23]  guid=9f2c2c05-bdcb-4071-9e67-41fa2c39ac32
[2021-10-01 14:17:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-10-01 14:17:23]  is_tar=False
[2021-10-01 14:17:23]  lfn=06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz
[2021-10-01 14:17:23]  mtime=0
[2021-10-01 14:17:23]  protocol_id=None
[2021-10-01 14:17:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-10-01 14:17:23]  replicas=None
[2021-10-01 14:17:23]  scope=hc_test
[2021-10-01 14:17:23]  status=None
[2021-10-01 14:17:23]  status_code=0
[2021-10-01 14:17:23]  storage_token=
[2021-10-01 14:17:23]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz
[2021-10-01 14:17:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/a4/46/06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz
[2021-10-01 14:17:23]  workdir=None
[2021-10-01 14:17:23] ]
[2021-10-01 14:17:23] 2021-10-01 18:16:56,849 | INFO     | transferring file 06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz from /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/06b4e9b1-0105-42b1-a277-62e773bec
[2021-10-01 14:17:23] 2021-10-01 18:16:56,849 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz /var/lib/boinc-client
[2021-10-01 14:17:23] 2021-10-01 18:16:57,097 | INFO     | Adding to output.list: 06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadisk/r
[2021-10-01 14:17:23] 2021-10-01 18:16:57,098 | INFO     | executing command: ps aux -q 13123
[2021-10-01 14:17:23] 2021-10-01 18:16:57,777 | INFO     | summary of transferred files:
[2021-10-01 14:17:23] 2021-10-01 18:16:57,777 | INFO     |  -- lfn=06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz, status_code=0, status=transferred
[2021-10-01 14:17:23] 2021-10-01 18:16:57,778 | INFO     | stage-out finished correctly
[2021-10-01 14:17:23] 2021-10-01 18:17:00,261 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2021-10-01 14:17:23] 2021-10-01 18:17:00,681 | INFO     | job 5207856713 has state=finished
[2021-10-01 14:17:23] 2021-10-01 18:17:00,681 | INFO     | preparing for final server update for job 5207856713 in state='finished'
[2021-10-01 14:17:23] 2021-10-01 18:17:00,686 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /var/lib/boinc-client/slots/2/PanDA_Pilot-520
[2021-10-01 14:17:23] 2021-10-01 18:17:06,605 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2021-10-01 14:17:23] 2021-10-01 18:17:06,605 | INFO     | job 5207856713 has finished - writing final server update
[2021-10-01 14:17:23] 2021-10-01 18:17:06,606 | INFO     | will not add max space = -33104380 B to job metrics
[2021-10-01 14:17:23] 2021-10-01 18:17:06,608 | INFO     | fitting pss+swap vs Time
[2021-10-01 14:17:23] 2021-10-01 18:17:06,613 | INFO     | current memory leak: -123.65 B/s (using 51 data points, chi2=16809302)
[2021-10-01 14:17:23] 2021-10-01 18:17:06,619 | INFO     | mean actualcorecount: 4.386364
[2021-10-01 14:17:23] 2021-10-01 18:17:06,620 | INFO     | total number of processed events: 2 (read)
[2021-10-01 14:17:23] 2021-10-01 18:17:06,646 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-10-01 14:17:23] 2021-10-01 18:17:07,265 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-5207856713/memory_monitor_summary.json (trf name=prmon)
[2021-10-01 14:17:23] 2021-10-01 18:17:07,270 | INFO     | extracted standard info from prmon json
[2021-10-01 14:17:23] 2021-10-01 18:17:07,271 | INFO     | extracted standard memory fields from prmon json
[2021-10-01 14:17:23] 2021-10-01 18:17:07,271 | INFO     | ..............................
[2021-10-01 14:17:23] 2021-10-01 18:17:07,271 | INFO     | . Timing measurements:
[2021-10-01 14:17:23] 2021-10-01 18:17:07,271 | INFO     | . get job = 0 s
[2021-10-01 14:17:23] 2021-10-01 18:17:07,271 | INFO     | . initial setup = 5 s
[2021-10-01 14:17:23] 2021-10-01 18:17:07,271 | INFO     | . payload setup = 252 s
[2021-10-01 14:17:23] 2021-10-01 18:17:07,272 | INFO     | . total setup = 257 s
[2021-10-01 14:17:23] 2021-10-01 18:17:07,272 | INFO     | . stage-in = 2 s
[2021-10-01 14:17:23] 2021-10-01 18:17:07,272 | INFO     | . payload execution = 3671 s
[2021-10-01 14:17:23] 2021-10-01 18:17:07,272 | INFO     | . stage-out = 5 s
[2021-10-01 14:17:23] 2021-10-01 18:17:07,272 | INFO     | ..............................
[2021-10-01 14:17:23] 2021-10-01 18:17:07,749 | INFO     | 
[2021-10-01 14:17:23] 2021-10-01 18:17:07,750 | INFO     | job summary report
[2021-10-01 14:17:23] 2021-10-01 18:17:07,750 | INFO     | --------------------------------------------------
[2021-10-01 14:17:23] 2021-10-01 18:17:07,750 | INFO     | PanDA job id: 5207856713
[2021-10-01 14:17:23] 2021-10-01 18:17:07,753 | INFO     | task id: NULL
[2021-10-01 14:17:23] 2021-10-01 18:17:07,753 | INFO     | errors: (none)
[2021-10-01 14:17:23] 2021-10-01 18:17:07,753 | INFO     | status: LOG_TRANSFER = DONE 
[2021-10-01 14:17:23] 2021-10-01 18:17:07,753 | INFO     | pilot state: finished 
[2021-10-01 14:17:23] 2021-10-01 18:17:07,754 | INFO     | transexitcode: 0
[2021-10-01 14:17:23] 2021-10-01 18:17:07,754 | INFO     | exeerrorcode: 0
[2021-10-01 14:17:23] 2021-10-01 18:17:07,754 | INFO     | exeerrordiag: 
[2021-10-01 14:17:23] 2021-10-01 18:17:07,754 | INFO     | exitcode: 0
[2021-10-01 14:17:23] 2021-10-01 18:17:07,754 | INFO     | exitmsg: OK
[2021-10-01 14:17:23] 2021-10-01 18:17:07,754 | INFO     | cpuconsumptiontime: 1417 s
[2021-10-01 14:17:23] 2021-10-01 18:17:07,754 | INFO     | nevents: 2
[2021-10-01 14:17:23] 2021-10-01 18:17:07,754 | INFO     | neventsw: 0
[2021-10-01 14:17:23] 2021-10-01 18:17:07,755 | INFO     | pid: 18521
[2021-10-01 14:17:23] 2021-10-01 18:17:07,755 | INFO     | pgrp: 18521
[2021-10-01 14:17:23] 2021-10-01 18:17:07,755 | INFO     | corecount: 2
[2021-10-01 14:17:23] 2021-10-01 18:17:07,755 | INFO     | event service: False
[2021-10-01 14:17:23] 2021-10-01 18:17:07,755 | INFO     | sizes: {18501488: 3896630, 18501489: 3897794, 18501490: 3897962, 18501491: 3898075, 18501494: 3898241, 18501502: 3898183, 18505432: 3924033, 18505438: 3933541, 185
[2021-10-01 14:17:23] 2021-10-01 18:17:07,755 | INFO     | --------------------------------------------------
[2021-10-01 14:17:23] 2021-10-01 18:17:07,755 | INFO     | 
[2021-10-01 14:17:23] 2021-10-01 18:17:07,756 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2021-10-01 14:17:23] 2021-10-01 18:17:08,043 | INFO     | queue jobs has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,043 | INFO     | queue payloads has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,043 | INFO     | queue data_in has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,043 | INFO     | queue data_out has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,043 | INFO     | queue current_data_in has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,044 | INFO     | queue validated_jobs has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,044 | INFO     | queue validated_payloads has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,044 | INFO     | queue monitored_payloads has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,044 | INFO     | queue finished_jobs has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,044 | INFO     | queue finished_payloads has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,044 | INFO     | queue finished_data_in has 1 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,044 | INFO     | queue finished_data_out has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,044 | INFO     | queue failed_jobs has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,045 | INFO     | queue failed_payloads has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,045 | INFO     | queue failed_data_in has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,045 | INFO     | queue failed_data_out has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,045 | INFO     | queue completed_jobs has 0 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,045 | INFO     | queue completed_jobids has 1 job(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,045 | INFO     | job 5207856713 has completed (purged errors)
[2021-10-01 14:17:23] 2021-10-01 18:17:08,046 | INFO     | overall cleanup function is called
[2021-10-01 14:17:23] 2021-10-01 18:17:09,057 | INFO     | --- collectZombieJob: --- 10, [18521]
[2021-10-01 14:17:23] 2021-10-01 18:17:09,063 | INFO     | zombie collector trying to kill pid 18521
[2021-10-01 14:17:23] 2021-10-01 18:17:09,063 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-10-01 14:17:23] 2021-10-01 18:17:10,069 | INFO     | collected zombie processes
[2021-10-01 14:17:23] 2021-10-01 18:17:10,069 | INFO     | will now attempt to kill all subprocesses of pid=18521
[2021-10-01 14:17:23] 2021-10-01 18:17:10,869 | WARNING  | no jobs in monitored_payloads queue (waited for 91 s)
[2021-10-01 14:17:23] 2021-10-01 18:17:10,901 | INFO     | process IDs to be killed: [18521] (in reverse order)
[2021-10-01 14:17:23] 2021-10-01 18:17:11,848 | WARNING  | found no corresponding commands to process id(s)
[2021-10-01 14:17:23] 2021-10-01 18:17:11,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2021-10-01 14:17:23] 2021-10-01 18:17:11,849 | INFO     | ready for new job
[2021-10-01 14:17:23] 2021-10-01 18:17:11,849 | INFO     | pilot has finished for previous job - re-establishing logging
[2021-10-01 14:17:23] 2021-10-01 18:17:11,851 | INFO     | ****************************************
[2021-10-01 14:17:23] 2021-10-01 18:17:11,851 | INFO     | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-10-01 14:17:23] 2021-10-01 18:17:11,851 | INFO     | ****************************************
[2021-10-01 14:17:23] 2021-10-01 18:17:11,851 | INFO     | 
[2021-10-01 14:17:23] 2021-10-01 18:17:11,881 | INFO     | architecture information:
[2021-10-01 14:17:23] 2021-10-01 18:17:14,186 | INFO     | 
[2021-10-01 14:17:23] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-10-01 14:17:23] Distributor ID:	CentOS
[2021-10-01 14:17:23] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-10-01 14:17:23] Release:	7.8.2003
[2021-10-01 14:17:23] Codename:	Core
[2021-10-01 14:17:23] 2021-10-01 18:17:14,189 | INFO     | ****************************************
[2021-10-01 14:17:23] 2021-10-01 18:17:15,030 | INFO     | sufficient remaining disk space (44111495168 B)
[2021-10-01 14:17:23] 2021-10-01 18:17:15,030 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2021-10-01 14:17:23] 2021-10-01 18:17:15,273 | INFO     | [payload] failed_post thread has finished
[2021-10-01 14:17:23] 2021-10-01 18:17:15,289 | INFO     | [payload] validate_pre thread has finished
[2021-10-01 14:17:23] 2021-10-01 18:17:15,329 | INFO     | [monitor] control thread has ended
[2021-10-01 14:17:23] 2021-10-01 18:17:15,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-10-01 14:17:23] 2021-10-01 18:17:16,037 | INFO     | [payload] execute_payloads thread has finished
[2021-10-01 14:17:23] 2021-10-01 18:17:16,349 | INFO     | [payload] validate_post thread has finished
[2021-10-01 14:17:23] 2021-10-01 18:17:16,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2021-10-01 14:17:23] 2021-10-01 18:17:16,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2021-10-01 14:17:23] 2021-10-01 18:17:19,377 | INFO     | end of generic workflow (traces error code: 0)
[2021-10-01 14:17:23] 2021-10-01 18:17:19,378 | INFO     | traces error code: 0
[2021-10-01 14:17:23] 2021-10-01 18:17:19,378 | INFO     | pilot has finished
[2021-10-01 14:17:23] 2021-10-01 18:17:19,708 [wrapper] ==== pilot stdout END ====
[2021-10-01 14:17:23] 2021-10-01 18:17:19,809 [wrapper] ==== wrapper stdout RESUME ====
[2021-10-01 14:17:23] 2021-10-01 18:17:19,932 [wrapper] Pilot exit status: 0
[2021-10-01 14:17:23] 2021-10-01 18:17:20,357 [wrapper] pandaids: 5207856713
[2021-10-01 14:17:23] 2021-10-01 18:17:20,697 [wrapper] apfmon messages muted
[2021-10-01 14:17:23] 2021-10-01 18:17:20,821 [wrapper] Test setup, not cleaning
[2021-10-01 14:17:23] 2021-10-01 18:17:20,957 [wrapper] ==== wrapper stdout END ====
[2021-10-01 14:17:23] 2021-10-01 18:17:21,097 [wrapper] ==== wrapper stderr END ====
[2021-10-01 14:17:23] 2021-10-01 18:17:21,481 [wrapper] wrapperexiting ec=0, duration=4355
[2021-10-01 14:17:23] 2021-10-01 18:17:21,625 [wrapper] apfmon messages muted
[2021-10-01 14:17:23]  *** Error codes and diagnostics ***
[2021-10-01 14:17:23]     "exeErrorCode": 0,
[2021-10-01 14:17:23]     "exeErrorDiag": "",
[2021-10-01 14:17:23]     "pilotErrorCode": 0,
[2021-10-01 14:17:23]     "pilotErrorDiag": "",
[2021-10-01 14:17:23]  *** Listing of results directory ***
[2021-10-01 14:17:23] total 42956
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc   344681 Oct  1 11:24 pilot2.tar.gz
[2021-10-01 14:17:23] -rwx------ 1 boinc boinc    20816 Oct  1 12:06 runpilot2-wrapper.sh
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc     3214 Oct  1 12:06 queuedata.json
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc      107 Oct  1 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2021-10-01 14:17:23] -rwxr-xr-x 1 boinc boinc     6966 Oct  1 13:04 run_atlas
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc      112 Oct  1 13:04 job.xml
[2021-10-01 14:17:23] drwxrwx--x 2 boinc boinc     4096 Oct  1 13:04 shared
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc     6167 Oct  1 13:04 init_data.xml
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc        0 Oct  1 13:04 boinc_lockfile
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc    16529 Oct  1 13:04 start_atlas.sh
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc   354554 Oct  1 13:04 input.tar.gz
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc 37224345 Oct  1 13:04 EVNT.04972714._000026.pool.root.1
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc     2651 Oct  1 13:04 pandaJob.out
[2021-10-01 14:17:23] -rw------- 1 boinc boinc  1081552 Oct  1 13:11 agis_schedconf.cvmfs.json
[2021-10-01 14:17:23] -rw------- 1 boinc boinc  1964086 Oct  1 13:11 cric_ddmendpoints.json
[2021-10-01 14:17:23] drwx------ 4 boinc boinc     4096 Oct  1 13:11 pilot2
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc      534 Oct  1 14:01 boinc_task_state.xml
[2021-10-01 14:17:23] -rw------- 1 boinc boinc  1541940 Oct  1 14:16 Hits.hc_20219856.BOINC-TEST.06b4e9b1-0105-42b1-a277-62e773beccfe_8708.HITS.pool.root
[2021-10-01 14:17:23] -rw------- 1 boinc boinc     1016 Oct  1 14:16 memory_monitor_summary.json
[2021-10-01 14:17:23] -rw------- 1 boinc boinc   457983 Oct  1 14:16 06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log.tgz
[2021-10-01 14:17:23] -rw------- 1 boinc boinc     7979 Oct  1 14:17 heartbeat.json
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc     8192 Oct  1 14:17 boinc_mmap_file
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc       25 Oct  1 14:17 wrapper_checkpoint.txt
[2021-10-01 14:17:23] -rw------- 1 boinc boinc     1710 Oct  1 14:17 pilotlog.txt
[2021-10-01 14:17:23] -rw------- 1 boinc boinc   174856 Oct  1 14:17 06b4e9b1-0105-42b1-a277-62e773beccfe_8708.job.log
[2021-10-01 14:17:23] -rw------- 1 boinc boinc      578 Oct  1 14:17 output.list
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc      677 Oct  1 14:17 runtime_log
[2021-10-01 14:17:23] -rw------- 1 boinc boinc   655360 Oct  1 14:17 result.tar.gz
[2021-10-01 14:17:23] -rw------- 1 boinc boinc      565 Oct  1 14:17 X21MDmiEaqzn7Olcko1bjSoqABFKDmABFKDmZr2WDmvSFKDmcEkqKn.diag
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc     9187 Oct  1 14:17 runtime_log.err
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc    21651 Oct  1 14:17 stderr.txt
[2021-10-01 14:17:23] HITS file was successfully produced:
[2021-10-01 14:17:23] -rw------- 1 boinc boinc 1541940 Oct  1 14:16 shared/HITS.pool.root.1
[2021-10-01 14:17:23]  *** Contents of shared directory: ***
[2021-10-01 14:17:23] total 38868
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc    16529 Oct  1 13:04 start_atlas.sh
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc   354554 Oct  1 13:04 input.tar.gz
[2021-10-01 14:17:23] -rw-r--r-- 1 boinc boinc 37224345 Oct  1 13:04 ATLAS.root_0
[2021-10-01 14:17:23] -rw------- 1 boinc boinc  1541940 Oct  1 14:16 HITS.pool.root.1
[2021-10-01 14:17:23] -rw------- 1 boinc boinc   655360 Oct  1 14:17 result.tar.gz
14:17:24 (5007): run_atlas exited; CPU time 1246.738202
14:17:24 (5007): called boinc_finish(0)

</stderr_txt>
]]>


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