Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
08:15:53 (96063): wrapper (7.7.26015): starting
08:15:53 (96063): wrapper: running run_atlas (--nthreads 2)
[2021-10-05 08:15:53] Arguments: --nthreads 2
[2021-10-05 08:15:53] Threads: 2
[2021-10-05 08:15:53] Checking for CVMFS
[2021-10-05 08:15:54] Probing /cvmfs/atlas.cern.ch... OK
[2021-10-05 08:15:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-10-05 08:15:58] Running cvmfs_config stat atlas.cern.ch
[2021-10-05 08:16:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-10-05 08:16:00] 2.9.0.0 147949 20774 68536 93413 1 58 2672188 4194305 8191 130560 0 182190031 99.994 1325924 899 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-10-05 08:16:00] CVMFS is ok
[2021-10-05 08:16:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-10-05 08:16:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-10-05 08:16:00] Small home clusters do not require a local http proxy but it is suggested if
[2021-10-05 08:16:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-10-05 08:16:00] Further information can be found at the LHC@home message board.
[2021-10-05 08:16:00] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-10-05 08:16:00] Checking for singularity binary...
[2021-10-05 08:16:00] Using singularity found in PATH at /usr/local/bin/singularity
[2021-10-05 08:16:00] Running /usr/local/bin/singularity --version
[2021-10-05 08:16:00] singularity version 3.7.2+10-ga969f0f8c
[2021-10-05 08:16:00] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-10-05 08:16:01] E5-2670
[2021-10-05 08:16:01] Singularity works
[2021-10-05 08:16:02] Set ATHENA_PROC_NUMBER=2
[2021-10-05 08:16:02] Starting ATLAS job with PandaID=5211642471
[2021-10-05 08:16:02] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/10 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-10-05 09:49:45]  *** The last 200 lines of the pilot log: ***
[2021-10-05 09:49:45] 2021-10-05 13:48:50,179 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-10-05 09:49:45] 2021-10-05 13:48:50,193 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-10-05 09:49:45]  activity=['pw', 'w', 'default']
[2021-10-05 09:49:45]  allow_lan=True
[2021-10-05 09:49:45]  allow_wan=False
[2021-10-05 09:49:45]  checksum={'adler32': '218352a3'}
[2021-10-05 09:49:45]  dataset=hc_test.gangarbt.hc20222275.tid957.BOINC-TEST.41
[2021-10-05 09:49:45]  ddm_activity=<filter object at 0x7f18e63b6510>
[2021-10-05 09:49:45]  ddmendpoint=NDGF-T1_DATADISK
[2021-10-05 09:49:45]  direct_access_lan=False
[2021-10-05 09:49:45]  direct_access_wan=False
[2021-10-05 09:49:45]  domain=
[2021-10-05 09:49:45]  filesize=1819356
[2021-10-05 09:49:45]  filetype=output
[2021-10-05 09:49:45]  guid=B63C0257-4F0A-AF46-A83A-886DC38C0C4D
[2021-10-05 09:49:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-10-05 09:49:45]  is_tar=False
[2021-10-05 09:49:45]  lfn=output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root
[2021-10-05 09:49:45]  mtime=0
[2021-10-05 09:49:45]  protocol_id=None
[2021-10-05 09:49:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-10-05 09:49:45]  replicas=None
[2021-10-05 09:49:45]  scope=hc_test
[2021-10-05 09:49:45]  status=None
[2021-10-05 09:49:45]  status_code=0
[2021-10-05 09:49:45]  storage_token=
[2021-10-05 09:49:45]  surl=/var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root
[2021-10-05 09:49:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/35/68/output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root
[2021-10-05 09:49:45]  workdir=None
[2021-10-05 09:49:45] ]
[2021-10-05 09:49:45] 2021-10-05 13:48:50,451 | INFO     | transferring file output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root from /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/output.1.7e326b65-5b2f-4
[2021-10-05 09:49:45] 2021-10-05 13:48:50,451 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root /var/lib/boi
[2021-10-05 09:49:45] 2021-10-05 13:48:51,166 | INFO     | Adding to output.list: output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasda
[2021-10-05 09:49:45] 2021-10-05 13:48:51,167 | INFO     | executing command: ps aux -q 111061
[2021-10-05 09:49:45] 2021-10-05 13:48:51,680 | INFO     | summary of transferred files:
[2021-10-05 09:49:45] 2021-10-05 13:48:51,680 | INFO     |  -- lfn=output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root, status_code=0, status=transferred
[2021-10-05 09:49:45] 2021-10-05 13:48:51,680 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471
[2021-10-05 09:49:45] 2021-10-05 13:48:52,293 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root_001 (2, No such fil
[2021-10-05 09:49:45] 2021-10-05 13:48:52,293 | WARNING  | failed to remove directory: /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root_002 (2, No such fil
[2021-10-05 09:49:45] 2021-10-05 13:48:52,295 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471
[2021-10-05 09:49:45] 2021-10-05 13:48:52,729 | INFO     | will create archive /var/lib/boinc-client/slots/10/tarball_PandaJob_5211642471_BOINC-TEST/7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz
[2021-10-05 09:49:45] 2021-10-05 13:48:52,730 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/10/tarball_PandaJob_5211642471_BOINC-TEST/7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz tarb
[2021-10-05 09:49:45] 2021-10-05 13:48:53,433 | INFO     | prepare to stage-out 1 log file(s)
[2021-10-05 09:49:45] 2021-10-05 13:48:53,437 | INFO     | stage-out will not be done in a container
[2021-10-05 09:49:45] 2021-10-05 13:48:53,445 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2021-10-05 09:49:45] 2021-10-05 13:48:53,445 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2021-10-05 09:49:45] 2021-10-05 13:48:53,445 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2021-10-05 09:49:45] 2021-10-05 13:48:53,445 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2021-10-05 09:49:45] 2021-10-05 13:48:54,149 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2021-10-05 09:49:45] 2021-10-05 13:48:54,150 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2021-10-05 09:49:45]  activity=['pl', 'pw', 'w', 'default']
[2021-10-05 09:49:45]  allow_lan=True
[2021-10-05 09:49:45]  allow_wan=False
[2021-10-05 09:49:45]  checksum={'adler32': 'e054ade6'}
[2021-10-05 09:49:45]  dataset=hc_test.gangarbt.hc20222275.tid957.BOINC-TEST.41
[2021-10-05 09:49:45]  ddm_activity=<filter object at 0x7f18e6516bd0>
[2021-10-05 09:49:45]  ddmendpoint=NDGF-T1_DATADISK
[2021-10-05 09:49:45]  direct_access_lan=False
[2021-10-05 09:49:45]  direct_access_wan=False
[2021-10-05 09:49:45]  domain=
[2021-10-05 09:49:45]  filesize=464790
[2021-10-05 09:49:45]  filetype=log
[2021-10-05 09:49:45]  guid=62efad9e-8f8e-4df5-bf2d-d09546df27ac
[2021-10-05 09:49:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2021-10-05 09:49:45]  is_tar=False
[2021-10-05 09:49:45]  lfn=7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz
[2021-10-05 09:49:45]  mtime=0
[2021-10-05 09:49:45]  protocol_id=None
[2021-10-05 09:49:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2021-10-05 09:49:45]  replicas=None
[2021-10-05 09:49:45]  scope=hc_test
[2021-10-05 09:49:45]  status=None
[2021-10-05 09:49:45]  status_code=0
[2021-10-05 09:49:45]  storage_token=
[2021-10-05 09:49:45]  surl=/var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz
[2021-10-05 09:49:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/d9/cc/7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz
[2021-10-05 09:49:45]  workdir=None
[2021-10-05 09:49:45] ]
[2021-10-05 09:49:45] 2021-10-05 13:48:54,441 | INFO     | transferring file 7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz from /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/7e326b65-5b2f-4e1d-ba7b-cab00
[2021-10-05 09:49:45] 2021-10-05 13:48:54,442 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz /var/lib/boinc-cl
[2021-10-05 09:49:45] 2021-10-05 13:48:55,002 | INFO     | Adding to output.list: 7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz davs://dav.ndgf.org:443;autodir=no;spacetoken=ATLASDATADISK/atlas/disk/atlasdatadis
[2021-10-05 09:49:45] 2021-10-05 13:48:55,006 | INFO     | executing command: ps aux -q 111061
[2021-10-05 09:49:45] 2021-10-05 13:48:55,821 | INFO     | summary of transferred files:
[2021-10-05 09:49:45] 2021-10-05 13:48:55,822 | INFO     |  -- lfn=7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz, status_code=0, status=transferred
[2021-10-05 09:49:45] 2021-10-05 13:48:55,822 | INFO     | stage-out finished correctly
[2021-10-05 09:49:45] 2021-10-05 13:48:57,493 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2021-10-05 09:49:45] 2021-10-05 13:48:58,989 | INFO     | job 5211642471 has state=finished
[2021-10-05 09:49:45] 2021-10-05 13:48:58,989 | INFO     | preparing for final server update for job 5211642471 in state='finished'
[2021-10-05 09:49:45] 2021-10-05 13:48:58,990 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2021-10-05 09:49:45] 2021-10-05 13:48:58,990 | INFO     | job 5211642471 has finished - writing final server update
[2021-10-05 09:49:45] 2021-10-05 13:48:58,991 | INFO     | will not add max space = -33403934 B to job metrics
[2021-10-05 09:49:45] 2021-10-05 13:48:58,992 | INFO     | fitting pss+swap vs Time
[2021-10-05 09:49:45] 2021-10-05 13:48:59,001 | INFO     | current memory leak: -12.10 B/s (using 63 data points, chi2=15401572)
[2021-10-05 09:49:45] 2021-10-05 13:48:59,001 | INFO     | mean actualcorecount: 4.634615
[2021-10-05 09:49:45] 2021-10-05 13:48:59,001 | INFO     | total number of processed events: 2 (read)
[2021-10-05 09:49:45] 2021-10-05 13:48:59,026 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-10-05 09:49:45] 2021-10-05 13:48:59,642 | INFO     | using path: /var/lib/boinc-client/slots/10/PanDA_Pilot-5211642471/memory_monitor_summary.json (trf name=prmon)
[2021-10-05 09:49:45] 2021-10-05 13:48:59,644 | INFO     | extracted standard info from prmon json
[2021-10-05 09:49:45] 2021-10-05 13:48:59,644 | INFO     | extracted standard memory fields from prmon json
[2021-10-05 09:49:45] 2021-10-05 13:48:59,653 | INFO     | ..............................
[2021-10-05 09:49:45] 2021-10-05 13:48:59,653 | INFO     | . Timing measurements:
[2021-10-05 09:49:45] 2021-10-05 13:48:59,653 | INFO     | . get job = 0 s
[2021-10-05 09:49:45] 2021-10-05 13:48:59,653 | INFO     | . initial setup = 7 s
[2021-10-05 09:49:45] 2021-10-05 13:48:59,653 | INFO     | . payload setup = 365 s
[2021-10-05 09:49:45] 2021-10-05 13:48:59,653 | INFO     | . total setup = 372 s
[2021-10-05 09:49:45] 2021-10-05 13:48:59,654 | INFO     | . stage-in = 3 s
[2021-10-05 09:49:45] 2021-10-05 13:48:59,654 | INFO     | . payload execution = 4560 s
[2021-10-05 09:49:45] 2021-10-05 13:48:59,654 | INFO     | . stage-out = 6 s
[2021-10-05 09:49:45] 2021-10-05 13:48:59,654 | INFO     | ..............................
[2021-10-05 09:49:45] 2021-10-05 13:49:00,049 | INFO     | 
[2021-10-05 09:49:45] 2021-10-05 13:49:00,049 | INFO     | job summary report
[2021-10-05 09:49:45] 2021-10-05 13:49:00,049 | INFO     | --------------------------------------------------
[2021-10-05 09:49:45] 2021-10-05 13:49:00,050 | INFO     | PanDA job id: 5211642471
[2021-10-05 09:49:45] 2021-10-05 13:49:00,050 | INFO     | task id: NULL
[2021-10-05 09:49:45] 2021-10-05 13:49:00,050 | INFO     | errors: (none)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,050 | INFO     | status: LOG_TRANSFER = DONE 
[2021-10-05 09:49:45] 2021-10-05 13:49:00,050 | INFO     | pilot state: finished 
[2021-10-05 09:49:45] 2021-10-05 13:49:00,050 | INFO     | transexitcode: 0
[2021-10-05 09:49:45] 2021-10-05 13:49:00,050 | INFO     | exeerrorcode: 0
[2021-10-05 09:49:45] 2021-10-05 13:49:00,050 | INFO     | exeerrordiag: 
[2021-10-05 09:49:45] 2021-10-05 13:49:00,051 | INFO     | exitcode: 0
[2021-10-05 09:49:45] 2021-10-05 13:49:00,051 | INFO     | exitmsg: OK
[2021-10-05 09:49:45] 2021-10-05 13:49:00,051 | INFO     | cpuconsumptiontime: 1844 s
[2021-10-05 09:49:45] 2021-10-05 13:49:00,051 | INFO     | nevents: 2
[2021-10-05 09:49:45] 2021-10-05 13:49:00,051 | INFO     | neventsw: 0
[2021-10-05 09:49:45] 2021-10-05 13:49:00,051 | INFO     | pid: 120728
[2021-10-05 09:49:45] 2021-10-05 13:49:00,051 | INFO     | pgrp: 120728
[2021-10-05 09:49:45] 2021-10-05 13:49:00,052 | INFO     | corecount: 2
[2021-10-05 09:49:45] 2021-10-05 13:49:00,052 | INFO     | event service: False
[2021-10-05 09:49:45] 2021-10-05 13:49:00,052 | INFO     | sizes: {18830001: 3917792, 18830002: 3917848, 18830003: 3918017, 18830005: 3918017, 18830008: 3918239, 18830016: 3918181, 18834948: 3947215, 18834956: 3956685, 188
[2021-10-05 09:49:45] 2021-10-05 13:49:00,052 | INFO     | --------------------------------------------------
[2021-10-05 09:49:45] 2021-10-05 13:49:00,052 | INFO     | 
[2021-10-05 09:49:45] 2021-10-05 13:49:00,052 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/10
[2021-10-05 09:49:45] 2021-10-05 13:49:00,514 | INFO     | queue jobs has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,516 | INFO     | queue payloads has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,516 | INFO     | queue data_in has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,521 | INFO     | queue data_out has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,525 | INFO     | queue current_data_in has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,525 | INFO     | queue validated_jobs has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,525 | INFO     | queue validated_payloads has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,525 | INFO     | queue monitored_payloads has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,525 | INFO     | queue finished_jobs has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,526 | INFO     | queue finished_payloads has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,526 | INFO     | queue finished_data_in has 1 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,526 | INFO     | queue finished_data_out has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,526 | INFO     | queue failed_jobs has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,526 | INFO     | queue failed_payloads has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,526 | INFO     | queue failed_data_in has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,526 | INFO     | queue failed_data_out has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,526 | INFO     | queue completed_jobs has 0 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,527 | INFO     | queue completed_jobids has 1 job(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,527 | INFO     | job 5211642471 has completed (purged errors)
[2021-10-05 09:49:45] 2021-10-05 13:49:00,527 | INFO     | overall cleanup function is called
[2021-10-05 09:49:45] 2021-10-05 13:49:01,541 | INFO     | --- collectZombieJob: --- 10, [120728]
[2021-10-05 09:49:45] 2021-10-05 13:49:01,541 | INFO     | zombie collector trying to kill pid 120728
[2021-10-05 09:49:45] 2021-10-05 13:49:01,541 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-10-05 09:49:45] 2021-10-05 13:49:02,545 | INFO     | collected zombie processes
[2021-10-05 09:49:45] 2021-10-05 13:49:02,553 | INFO     | will now attempt to kill all subprocesses of pid=120728
[2021-10-05 09:49:45] 2021-10-05 13:49:03,209 | INFO     | process IDs to be killed: [120728] (in reverse order)
[2021-10-05 09:49:45] 2021-10-05 13:49:03,912 | WARNING  | found no corresponding commands to process id(s)
[2021-10-05 09:49:45] 2021-10-05 13:49:03,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2021-10-05 09:49:45] 2021-10-05 13:49:03,913 | INFO     | ready for new job
[2021-10-05 09:49:45] 2021-10-05 13:49:03,913 | INFO     | pilot has finished for previous job - re-establishing logging
[2021-10-05 09:49:45] 2021-10-05 13:49:03,914 | INFO     | ****************************************
[2021-10-05 09:49:45] 2021-10-05 13:49:03,914 | INFO     | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-10-05 09:49:45] 2021-10-05 13:49:03,914 | INFO     | ****************************************
[2021-10-05 09:49:45] 2021-10-05 13:49:03,914 | INFO     | 
[2021-10-05 09:49:45] 2021-10-05 13:49:03,934 | INFO     | architecture information:
[2021-10-05 09:49:45] 2021-10-05 13:49:06,533 | INFO     | 
[2021-10-05 09:49:45] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-10-05 09:49:45] Distributor ID:	CentOS
[2021-10-05 09:49:45] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-10-05 09:49:45] Release:	7.8.2003
[2021-10-05 09:49:45] Codename:	Core
[2021-10-05 09:49:45] 2021-10-05 13:49:06,533 | INFO     | ****************************************
[2021-10-05 09:49:45] 2021-10-05 13:49:07,345 | INFO     | sufficient remaining disk space (44970278912 B)
[2021-10-05 09:49:45] 2021-10-05 13:49:07,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2021-10-05 09:49:45] 2021-10-05 13:49:07,357 | WARNING  | aborting monitor loop since graceful_stop has been set
[2021-10-05 09:49:45] 2021-10-05 13:49:07,357 | INFO     | [monitor] control thread has ended
[2021-10-05 09:49:45] 2021-10-05 13:49:07,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2021-10-05 09:49:45] 2021-10-05 13:49:07,601 | INFO     | [payload] execute_payloads thread has finished
[2021-10-05 09:49:45] 2021-10-05 13:49:07,605 | INFO     | [payload] validate_pre thread has finished
[2021-10-05 09:49:45] 2021-10-05 13:49:07,673 | INFO     | [payload] validate_post thread has finished
[2021-10-05 09:49:45] 2021-10-05 13:49:08,493 | INFO     | [payload] failed_post thread has finished
[2021-10-05 09:49:45] 2021-10-05 13:49:08,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-10-05 09:49:45] 2021-10-05 13:49:09,089 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2021-10-05 09:49:45] 2021-10-05 13:49:39,249 | WARNING  | no jobs in monitored_payloads queue (waited for 81 s)
[2021-10-05 09:49:45] 2021-10-05 13:49:40,121 | INFO     | end of generic workflow (traces error code: 0)
[2021-10-05 09:49:45] 2021-10-05 13:49:40,125 | INFO     | traces error code: 0
[2021-10-05 09:49:45] 2021-10-05 13:49:40,125 | INFO     | pilot has finished
[2021-10-05 09:49:45] 2021-10-05 13:49:40,521 [wrapper] ==== pilot stdout END ====
[2021-10-05 09:49:45] 2021-10-05 13:49:40,709 [wrapper] ==== wrapper stdout RESUME ====
[2021-10-05 09:49:45] 2021-10-05 13:49:40,905 [wrapper] Pilot exit status: 0
[2021-10-05 09:49:45] 2021-10-05 13:49:41,589 [wrapper] pandaids: 5211642471
[2021-10-05 09:49:45] 2021-10-05 13:49:42,020 [wrapper] apfmon messages muted
[2021-10-05 09:49:45] 2021-10-05 13:49:42,225 [wrapper] Test setup, not cleaning
[2021-10-05 09:49:45] 2021-10-05 13:49:42,409 [wrapper] ==== wrapper stdout END ====
[2021-10-05 09:49:45] 2021-10-05 13:49:42,537 [wrapper] ==== wrapper stderr END ====
[2021-10-05 09:49:45] 2021-10-05 13:49:43,005 [wrapper] wrapperexiting ec=0, duration=5615
[2021-10-05 09:49:45] 2021-10-05 13:49:43,157 [wrapper] apfmon messages muted
[2021-10-05 09:49:45]  *** Error codes and diagnostics ***
[2021-10-05 09:49:45]     "exeErrorCode": 0,
[2021-10-05 09:49:45]     "exeErrorDiag": "",
[2021-10-05 09:49:45]     "pilotErrorCode": 0,
[2021-10-05 09:49:45]     "pilotErrorDiag": "",
[2021-10-05 09:49:45]  *** Listing of results directory ***
[2021-10-05 09:49:45] total 45784
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc   344681 Oct  5 06:28 pilot2.tar.gz
[2021-10-05 09:49:45] -rwx------ 1 boinc boinc    21085 Oct  5 06:45 runpilot2-wrapper.sh
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc     3214 Oct  5 06:45 queuedata.json
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc      107 Oct  5 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2021-10-05 09:49:45] -rwxr-xr-x 1 boinc boinc     6966 Oct  5 08:15 run_atlas
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc      112 Oct  5 08:15 job.xml
[2021-10-05 09:49:45] drwxrwx--x 2 boinc boinc     4096 Oct  5 08:15 shared
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc     6168 Oct  5 08:15 init_data.xml
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc        0 Oct  5 08:15 boinc_lockfile
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc    16541 Oct  5 08:16 start_atlas.sh
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc   354625 Oct  5 08:16 input.tar.gz
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc 37965264 Oct  5 08:16 EVNT.04972714._000027.pool.root.1
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc     2612 Oct  5 08:16 pandaJob.out
[2021-10-05 09:49:45] -rw------- 1 boinc boinc  1073965 Oct  5 08:26 agis_schedconf.cvmfs.json
[2021-10-05 09:49:45] -rw------- 1 boinc boinc  1973214 Oct  5 08:26 cric_ddmendpoints.json
[2021-10-05 09:49:45] drwx------ 4 boinc boinc     4096 Oct  5 08:26 pilot2
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc      535 Oct  5 09:25 boinc_task_state.xml
[2021-10-05 09:49:45] -rw------- 1 boinc boinc  1819356 Oct  5 09:48 output.1.7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.pool.root
[2021-10-05 09:49:45] -rw------- 1 boinc boinc     1021 Oct  5 09:48 memory_monitor_summary.json
[2021-10-05 09:49:45] -rw------- 1 boinc boinc   464790 Oct  5 09:48 7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log.tgz
[2021-10-05 09:49:45] -rw------- 1 boinc boinc    10037 Oct  5 09:48 heartbeat.json
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc     8192 Oct  5 09:49 boinc_mmap_file
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc       26 Oct  5 09:49 wrapper_checkpoint.txt
[2021-10-05 09:49:45] -rw------- 1 boinc boinc     1893 Oct  5 09:49 pilotlog.txt
[2021-10-05 09:49:45] -rw------- 1 boinc boinc   193287 Oct  5 09:49 7e326b65-5b2f-4e1d-ba7b-cab00e6c1d4d_35393.1.job.log
[2021-10-05 09:49:45] -rw------- 1 boinc boinc      536 Oct  5 09:49 output.list
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc      748 Oct  5 09:49 runtime_log
[2021-10-05 09:49:45] -rw------- 1 boinc boinc  2498560 Oct  5 09:49 result.tar.gz
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc     9557 Oct  5 09:49 runtime_log.err
[2021-10-05 09:49:45] -rw------- 1 boinc boinc      565 Oct  5 09:49 8GYNDmu7wrzn7Olcko1bjSoqABFKDmABFKDmZr2WDmBXFKDmCxtHhn.diag
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc    21483 Oct  5 09:49 stderr.txt
[2021-10-05 09:49:45] HITS file was successfully produced:
[2021-10-05 09:49:45] -rw------- 1 boinc boinc 1819356 Oct  5 09:48 shared/HITS.pool.root.1
[2021-10-05 09:49:45]  *** Contents of shared directory: ***
[2021-10-05 09:49:45] total 41668
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc    16541 Oct  5 08:15 start_atlas.sh
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc   354625 Oct  5 08:15 input.tar.gz
[2021-10-05 09:49:45] -rw-r--r-- 1 boinc boinc 37965264 Oct  5 08:15 ATLAS.root_0
[2021-10-05 09:49:45] -rw------- 1 boinc boinc  1819356 Oct  5 09:48 HITS.pool.root.1
[2021-10-05 09:49:45] -rw------- 1 boinc boinc  2498560 Oct  5 09:49 result.tar.gz
09:49:46 (96063): run_atlas exited; CPU time 1615.360956
09:49:46 (96063): called boinc_finish(0)

</stderr_txt>
]]>

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