Name | hIpMDm5dwszn7Olcko1bjSoqABFKDmABFKDmZr2WDmXZFKDmv81EQo_0 |
Workunit | 2133613 |
Created | 8 Oct 2021, 4:26:42 UTC |
Sent | 8 Oct 2021, 4:42:19 UTC |
Report deadline | 15 Oct 2021, 4:42:19 UTC |
Received | 8 Oct 2021, 4:55:10 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4462 |
Run time | 12 min 15 sec |
CPU time | 6 min 9 sec |
Validate state | Valid |
Credit | 84.09 |
Device peak FLOPS | 49.42 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.49 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 82.53 MB |
<core_client_version>7.16.6</core_client_version> <![CDATA[ <stderr_txt> 00:42:32 (3282452): wrapper (7.7.26015): starting 00:42:32 (3282452): wrapper: running run_atlas (--nthreads 8) [2021-10-08 00:42:32] Arguments: --nthreads 8 [2021-10-08 00:42:32] Threads: 8 [2021-10-08 00:42:32] Checking for CVMFS [2021-10-08 00:42:32] Probing /cvmfs/atlas.cern.ch... OK [2021-10-08 00:42:32] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-10-08 00:42:32] Running cvmfs_config stat atlas.cern.ch [2021-10-08 00:42:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-10-08 00:42:32] 2.9.0.0 3282020 0 24700 93581 3 1 5506836 6144000 0 130560 0 0 0.000 529 794 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.100:3128 1 [2021-10-08 00:42:32] CVMFS is ok [2021-10-08 00:42:32] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-10-08 00:42:32] Checking for singularity binary... [2021-10-08 00:42:32] Using singularity found in PATH at /usr/local/bin/singularity [2021-10-08 00:42:32] Running /usr/local/bin/singularity --version [2021-10-08 00:42:32] singularity version 3.8.1 [2021-10-08 00:42:32] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-10-08 00:42:33] WARNING: While bind mounting '/cvmfs:/cvmfs': destination is already in the mount point list ORTHANC [2021-10-08 00:42:33] Singularity works [2021-10-08 00:42:33] Set ATHENA_PROC_NUMBER=8 [2021-10-08 00:42:33] Starting ATLAS job with PandaID=5213985372 [2021-10-08 00:42:33] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/11 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-10-08 00:54:44] *** The last 200 lines of the pilot log: *** [2021-10-08 00:54:44] "cpuEfficiency": 0.5772, [2021-10-08 00:54:44] "cpuPWEfficiency": 0.5772, [2021-10-08 00:54:44] "cpuTime": 3, [2021-10-08 00:54:44] "cpuTimeTotal": 357, [2021-10-08 00:54:44] "externalCpuTime": 2, [2021-10-08 00:54:44] "processedEvents": 2, [2021-10-08 00:54:44] "trfPredata": null, [2021-10-08 00:54:44] "wallTime": 622 [2021-10-08 00:54:44] } [2021-10-08 00:54:44] } [2021-10-08 00:54:44] } [2021-10-08 00:54:44] 2021-10-08 04:53:57,496 | DEBUG | pilot.user.atlas.common | update_server | no need to update logstash for this job [2021-10-08 00:54:44] 2021-10-08 04:53:57,496 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-10-08 00:54:44] 2021-10-08 04:53:57,496 | INFO | pilot.control.job | send_state | job 5213985372 has finished - writing final server update [2021-10-08 00:54:44] 2021-10-08 04:53:57,496 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 8 [2021-10-08 00:54:44] 2021-10-08 04:53:57,496 | INFO | pilot.user.atlas.jobmetrics | get_job_metrics_string | will not add max space = -38122852 B to job metrics [2021-10-08 00:54:44] 2021-10-08 04:53:57,497 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-10-08 00:54:44] 2021-10-08 04:53:57,497 | WARNING | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[1633668507.0, 1633668568.0, 1633668629.0, 1633668690.0], y=[1161335.0 [2021-10-08 00:54:44] 2021-10-08 04:53:57,497 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=4 nEvents=2 dbTime=85.42 dbData=4274626 eventnumber=14002" [2021-10-08 00:54:44] 2021-10-08 04:53:57,497 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 3.777778 [2021-10-08 00:54:44] 2021-10-08 04:53:57,497 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-10-08 00:54:44] 2021-10-08 04:53:57,520 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-10-08 00:54:44] 2021-10-08 04:53:57,571 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-5213985372/memory_monitor_summary.json (trf n [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.3629999999999995, 'nthreads': 6.181, 'pss': 1149111.0, 'rcha [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | .............................. [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | . payload setup = 12 s [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | . total setup = 13 s [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | . payload execution = 634 s [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | INFO | pilot.util.timing | timing_report | .............................. [2021-10-08 00:54:44] 2021-10-08 04:53:57,572 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-10-08 00:54:44] 2021-10-08 04:53:57,573 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5213985372', 'state': 'finished', 'timestamp': '2021-10-08T00:53:57 [2021-10-08 00:54:44] 2021-10-08 04:53:57,573 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/11/heartbeat.json [2021-10-08 00:54:44] 2021-10-08 04:53:57,573 | DEBUG | pilot.control.job | queue_monitor | job 5213985372 was dequeued from the monitored payloads queue [2021-10-08 00:54:44] 2021-10-08 04:53:57,630 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-10-08 00:54:44] 2021-10-08 04:53:57,857 | INFO | pilot.control.job | make_job_report | [2021-10-08 00:54:44] 2021-10-08 04:53:57,857 | INFO | pilot.control.job | make_job_report | job summary report [2021-10-08 00:54:44] 2021-10-08 04:53:57,857 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-10-08 00:54:44] 2021-10-08 04:53:57,857 | INFO | pilot.control.job | make_job_report | PanDA job id: 5213985372 [2021-10-08 00:54:44] 2021-10-08 04:53:57,857 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-10-08 00:54:44] 2021-10-08 04:53:57,857 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-10-08 00:54:44] 2021-10-08 04:53:57,857 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 376 s [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | pid: 3306434 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | pgrp: 3306434 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | corecount: 8 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | event service: False [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | sizes: {17353978: 3922726, 17353989: 3922612, 17354639: 3943078, 17354640: 3952548, 17354642: 395282 [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.control.job | make_job_report | [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/11: [2021-10-08 00:54:44] [2021-10-08 00:54:44] 2021-10-08 04:53:57,858 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/11 [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | DEBUG | pilot.control.job | has_job_completed | total 44148 [2021-10-08 00:54:44] -rw------- 1 boinc boinc 156589 Oct 8 00:53 a8ed6cdb-a571-42e6-b8f2-d148f9d4c4bc_23293.1.job.log [2021-10-08 00:54:44] -rw------- 1 boinc boinc 156083 Oct 8 00:53 a8ed6cdb-a571-42e6-b8f2-d148f9d4c4bc_23293.1.job.log.tgz [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1084299 Oct 8 00:42 agis_schedconf.cvmfs.json [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 0 Oct 8 00:42 boinc_lockfile [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 8192 Oct 8 00:53 boinc_mmap_file [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 532 Oct 8 00:53 boinc_task_state.xml [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1975642 Oct 8 00:42 cric_ddmendpoints.json [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 38971704 Oct 8 00:42 EVNT.04972714._000035.pool.root.1 [2021-10-08 00:54:44] -rw------- 1 boinc boinc 6512 Oct 8 00:53 heartbeat.json [2021-10-08 00:54:44] -rw------- 1 boinc boinc 130 Oct 8 00:42 hIpMDm5dwszn7Olcko1bjSoqABFKDmABFKDmZr2WDmXZFKDmv81EQo.diag [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 9294 Oct 8 00:42 init_data.xml [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 356657 Oct 8 00:42 input.tar.gz [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 112 Oct 8 00:42 job.xml [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1024 Oct 8 00:53 memory_monitor_summary.json [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1847281 Oct 8 00:53 output.1.a8ed6cdb-a571-42e6-b8f2-d148f9d4c4bc_23293.pool.root [2021-10-08 00:54:44] -rw------- 1 boinc boinc 536 Oct 8 00:53 output.list [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 2595 Oct 8 00:42 pandaJob.out [2021-10-08 00:54:44] drwxrwx--- 2 boinc boinc 4096 Oct 8 00:53 PanDA_Pilot-5213985372/ [2021-10-08 00:54:44] drwx------ 4 boinc boinc 4096 Oct 8 00:42 pilot2/ [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 346717 Sep 23 07:39 pilot2.tar.gz [2021-10-08 00:54:44] -rw------- 1 boinc boinc 137118 Oct 8 00:53 pilotlog.txt [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 3214 Oct 8 00:26 queuedata.json [2021-10-08 00:54:44] -rwxr-xr-x 1 boinc boinc 6966 Oct 8 00:42 run_atlas* [2021-10-08 00:54:44] -rwx------ 1 boinc boinc 20631 Oct 8 00:26 runpilot2-wrapper.sh* [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 407 Oct 8 00:42 runtime_log [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 6960 Oct 8 00:42 runtime_log.err [2021-10-08 00:54:44] -rw------- 1 boinc boinc 463 Oct 8 00:42 setup.sh.local [2021-10-08 00:54:44] drwxrwx--x 2 boinc boinc 4096 Oct 8 00:42 shared/ [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 16569 Oct 8 00:42 start_atlas.sh [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 1833 Oct 8 00:42 stderr.txt [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 107 Oct 8 00:42 wrapper_26015_x86_64-pc-linux-gnu [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 24 Oct 8 00:53 wrapper_checkpoint.txt [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,875 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,876 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,876 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,876 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,876 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-10-08 00:54:44] 2021-10-08 04:53:57,876 | INFO | pilot.control.job | has_job_completed | job 5213985372 has completed (purged errors) [2021-10-08 00:54:44] 2021-10-08 04:53:57,876 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-10-08 00:54:44] 2021-10-08 04:53:57,877 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/11/PanDA_Pilot-5213985372 [2021-10-08 00:54:44] 2021-10-08 04:53:58,882 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [3306434] [2021-10-08 00:54:44] 2021-10-08 04:53:58,882 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 3306434 [2021-10-08 00:54:44] 2021-10-08 04:53:58,882 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-10-08 00:54:44] 2021-10-08 04:53:59,887 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-10-08 00:54:44] 2021-10-08 04:53:59,887 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=3306434 [2021-10-08 00:54:44] 2021-10-08 04:53:59,936 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [3306434] (in reverse order) [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | INFO | pilot.control.job | retrieve | ready for new job [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.6 (1) *** [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-10-08 00:54:44] 2021-10-08 04:53:59,970 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-10-08 00:54:44] 2021-10-08 04:53:59,988 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-10-08 00:54:44] 2021-10-08 04:54:00,056 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-10-08 00:54:44] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-10-08 00:54:44] Distributor ID: CentOS [2021-10-08 00:54:44] Description: CentOS Linux release 7.8.2003 (Core) [2021-10-08 00:54:44] Release: 7.8.2003 [2021-10-08 00:54:44] Codename: Core [2021-10-08 00:54:44] 2021-10-08 04:54:00,056 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-10-08 00:54:44] 2021-10-08 04:54:00,558 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/11 [2021-10-08 00:54:44] 2021-10-08 04:54:00,570 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (357314854912 B) [2021-10-08 00:54:44] 2021-10-08 04:54:00,570 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-10-08 00:54:44] 2021-10-08 04:54:00,570 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:00,570 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-10-08 00:54:44] 2021-10-08 04:54:00,570 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:00,571 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-10-08 00:54:44] 2021-10-08 04:54:00,827 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:00,827 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,043 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-10-08 00:54:44] 2021-10-08 04:54:01,043 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,043 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,047 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-10-08 00:54:44] 2021-10-08 04:54:01,047 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,047 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,053 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-10-08 00:54:44] 2021-10-08 04:54:01,054 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,054 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,059 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,059 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,141 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,141 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,171 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-10-08 00:54:44] 2021-10-08 04:54:01,226 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,226 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,272 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,272 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,463 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,463 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:01,478 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:01,478 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:02,171 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:02,171 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:02,639 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-10-08 00:54:44] 2021-10-08 04:54:02,639 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:02,639 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:03,501 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-10-08 00:54:44] 2021-10-08 04:54:06,501 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-10-08 00:54:44] 2021-10-08 04:54:06,502 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:43,397 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s) [2021-10-08 00:54:44] 2021-10-08 04:54:43,397 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-10-08 00:54:44] 2021-10-08 04:54:43,397 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-10-08 00:54:44] 2021-10-08 04:54:43,397 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-10-08 00:54:44] 2021-10-08 04:54:44,006 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-10-08 00:54:44] 2021-10-08 04:54:44,007 | INFO | root | wrap_up | traces error code: 0 [2021-10-08 00:54:44] 2021-10-08 04:54:44,007 | INFO | root | wrap_up | pilot has finished [2021-10-08 00:54:44] 2021-10-08 04:54:44,040 [wrapper] ==== pilot stdout END ==== [2021-10-08 00:54:44] 2021-10-08 04:54:44,043 [wrapper] ==== wrapper stdout RESUME ==== [2021-10-08 00:54:44] 2021-10-08 04:54:44,047 [wrapper] Pilot exit status: 0 [2021-10-08 00:54:44] 2021-10-08 04:54:44,059 [wrapper] pandaids: 5213985372 [2021-10-08 00:54:44] 2021-10-08 04:54:44,067 [wrapper] apfmon messages muted [2021-10-08 00:54:44] 2021-10-08 04:54:44,071 [wrapper] Test setup, not cleaning [2021-10-08 00:54:44] 2021-10-08 04:54:44,075 [wrapper] ==== wrapper stdout END ==== [2021-10-08 00:54:44] 2021-10-08 04:54:44,079 [wrapper] ==== wrapper stderr END ==== [2021-10-08 00:54:44] 2021-10-08 04:54:44,086 [wrapper] wrapperexiting ec=0, duration=730 [2021-10-08 00:54:44] 2021-10-08 04:54:44,090 [wrapper] apfmon messages muted [2021-10-08 00:54:44] *** Error codes and diagnostics *** [2021-10-08 00:54:44] "exeErrorCode": 0, [2021-10-08 00:54:44] "exeErrorDiag": "", [2021-10-08 00:54:44] "pilotErrorCode": 0, [2021-10-08 00:54:44] "pilotErrorDiag": "", [2021-10-08 00:54:44] *** Listing of results directory *** [2021-10-08 00:54:44] total 46196 [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 346717 Sep 23 07:39 pilot2.tar.gz [2021-10-08 00:54:44] -rwx------ 1 boinc boinc 20631 Oct 8 00:26 runpilot2-wrapper.sh [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 3214 Oct 8 00:26 queuedata.json [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 107 Oct 8 00:42 wrapper_26015_x86_64-pc-linux-gnu [2021-10-08 00:54:44] -rwxr-xr-x 1 boinc boinc 6966 Oct 8 00:42 run_atlas [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 112 Oct 8 00:42 job.xml [2021-10-08 00:54:44] drwxrwx--x 2 boinc boinc 4096 Oct 8 00:42 shared [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 9294 Oct 8 00:42 init_data.xml [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 0 Oct 8 00:42 boinc_lockfile [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 16569 Oct 8 00:42 start_atlas.sh [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 356657 Oct 8 00:42 input.tar.gz [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 38971704 Oct 8 00:42 EVNT.04972714._000035.pool.root.1 [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 2595 Oct 8 00:42 pandaJob.out [2021-10-08 00:54:44] -rw------- 1 boinc boinc 463 Oct 8 00:42 setup.sh.local [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1084299 Oct 8 00:42 agis_schedconf.cvmfs.json [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1975642 Oct 8 00:42 cric_ddmendpoints.json [2021-10-08 00:54:44] drwx------ 4 boinc boinc 4096 Oct 8 00:42 pilot2 [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1847281 Oct 8 00:53 output.1.a8ed6cdb-a571-42e6-b8f2-d148f9d4c4bc_23293.pool.root [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1024 Oct 8 00:53 memory_monitor_summary.json [2021-10-08 00:54:44] -rw------- 1 boinc boinc 156083 Oct 8 00:53 a8ed6cdb-a571-42e6-b8f2-d148f9d4c4bc_23293.1.job.log.tgz [2021-10-08 00:54:44] -rw------- 1 boinc boinc 6512 Oct 8 00:53 heartbeat.json [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 532 Oct 8 00:53 boinc_task_state.xml [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 24 Oct 8 00:54 wrapper_checkpoint.txt [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 8192 Oct 8 00:54 boinc_mmap_file [2021-10-08 00:54:44] -rw------- 1 boinc boinc 7519 Oct 8 00:54 pilotlog.txt [2021-10-08 00:54:44] -rw------- 1 boinc boinc 171485 Oct 8 00:54 a8ed6cdb-a571-42e6-b8f2-d148f9d4c4bc_23293.1.job.log [2021-10-08 00:54:44] -rw------- 1 boinc boinc 536 Oct 8 00:54 output.list [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 10955 Oct 8 00:54 runtime_log.err [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 748 Oct 8 00:54 runtime_log [2021-10-08 00:54:44] -rw------- 1 boinc boinc 2191360 Oct 8 00:54 result.tar.gz [2021-10-08 00:54:44] -rw------- 1 boinc boinc 560 Oct 8 00:54 hIpMDm5dwszn7Olcko1bjSoqABFKDmABFKDmZr2WDmXZFKDmv81EQo.diag [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 29275 Oct 8 00:54 stderr.txt [2021-10-08 00:54:44] HITS file was successfully produced: [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1847281 Oct 8 00:53 shared/HITS.pool.root.1 [2021-10-08 00:54:44] *** Contents of shared directory: *** [2021-10-08 00:54:44] total 42376 [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 16569 Oct 8 00:42 start_atlas.sh [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 356657 Oct 8 00:42 input.tar.gz [2021-10-08 00:54:44] -rw-r--r-- 1 boinc boinc 38971704 Oct 8 00:42 ATLAS.root_0 [2021-10-08 00:54:44] -rw------- 1 boinc boinc 1847281 Oct 8 00:53 HITS.pool.root.1 [2021-10-08 00:54:44] -rw------- 1 boinc boinc 2191360 Oct 8 00:54 result.tar.gz 00:54:45 (3282452): run_atlas exited; CPU time 369.628968 00:54:45 (3282452): called boinc_finish(0) </stderr_txt> ]]>
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