Name P26MDmSYvtzn7Olcko1bjSoqABFKDmABFKDmZr2WDmwbFKDmSolaIm_0
Workunit 2134330
Created 10 Oct 2021, 21:28:56 UTC
Sent 10 Oct 2021, 21:33:04 UTC
Report deadline 17 Oct 2021, 21:33:04 UTC
Received 10 Oct 2021, 21:53:14 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 19 min 44 sec
CPU time 13 min 46 sec
Validate state Valid
Credit 7.00
Device peak FLOPS 6.11 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.41 GB
Peak swap size 2.12 GB
Peak disk usage 84.69 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
17:33:19 (53974): wrapper (7.7.26015): starting
17:33:19 (53974): wrapper: running run_atlas (--nthreads 2)
[2021-10-10 17:33:19] Arguments: --nthreads 2
[2021-10-10 17:33:19] Threads: 2
[2021-10-10 17:33:19] Checking for CVMFS
[2021-10-10 17:33:21] Probing /cvmfs/atlas.cern.ch... OK
[2021-10-10 17:33:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-10-10 17:33:23] Running cvmfs_config stat atlas.cern.ch
[2021-10-10 17:33:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-10-10 17:33:23] 2.9.0.0 54183 0 24568 93745 3 1 3678417 4194305 0 130560 0 0 100.000 0 0 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-10-10 17:33:23] CVMFS is ok
[2021-10-10 17:33:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-10-10 17:33:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-10-10 17:33:23] Small home clusters do not require a local http proxy but it is suggested if
[2021-10-10 17:33:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-10-10 17:33:23] Further information can be found at the LHC@home message board.
[2021-10-10 17:33:23] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-10-10 17:33:23] Checking for singularity binary...
[2021-10-10 17:33:23] Using singularity found in PATH at /usr/local/bin/singularity
[2021-10-10 17:33:23] Running /usr/local/bin/singularity --version
[2021-10-10 17:33:23] singularity version 3.7.2+10-ga969f0f8c
[2021-10-10 17:33:23] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-10-10 17:33:23] E5-2670
[2021-10-10 17:33:23] Singularity works
[2021-10-10 17:33:23] Set ATHENA_PROC_NUMBER=2
[2021-10-10 17:33:23] Starting ATLAS job with PandaID=5216393475
[2021-10-10 17:33:23] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/4 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-10-10 17:53:00]  *** The last 200 lines of the pilot log: ***
[2021-10-10 17:53:00]       "cpuEfficiency": 0.4528, 
[2021-10-10 17:53:00]       "cpuPWEfficiency": 0.4817, 
[2021-10-10 17:53:00]       "cpuTime": 6, 
[2021-10-10 17:53:00]       "cpuTimeTotal": 1049, 
[2021-10-10 17:53:00]       "externalCpuTime": 8, 
[2021-10-10 17:53:00]       "processedEvents": 2, 
[2021-10-10 17:53:00]       "trfPredata": null, 
[2021-10-10 17:53:00]       "wallTime": 1090
[2021-10-10 17:53:00]     }
[2021-10-10 17:53:00]   }
[2021-10-10 17:53:00] }
[2021-10-10 17:53:00] 2021-10-10 21:52:35,976 | DEBUG    | pilot.user.atlas.common          | update_server             | no need to update logstash for this job
[2021-10-10 17:53:00] 2021-10-10 21:52:35,976 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-10-10 17:53:00] 2021-10-10 21:52:35,976 | INFO     | pilot.control.job                | send_state                | job 5216393475 has finished - writing final server update
[2021-10-10 17:53:00] 2021-10-10 21:52:35,977 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 2
[2021-10-10 17:53:00] 2021-10-10 21:52:35,977 | INFO     | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | will not add max space = -34623315 B to job metrics
[2021-10-10 17:53:00] 2021-10-10 21:52:35,977 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-10-10 17:53:00] 2021-10-10 21:52:35,978 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-10-10 17:53:00] 2021-10-10 21:52:35,978 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: -595.49 B/s (using 12 data points, chi2=2470266)
[2021-10-10 17:53:00] 2021-10-10 21:52:35,979 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=4 nEvents=2 dbTime=122.39 dbData=4308190 leak=-595.49 chi2=2470266 even
[2021-10-10 17:53:00] 2021-10-10 21:52:35,979 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.200000
[2021-10-10 17:53:00] 2021-10-10 21:52:35,979 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-10-10 17:53:00] 2021-10-10 21:52:35,998 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-10-10 17:53:00] 2021-10-10 21:52:36,049 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-5216393475/memory_monitor_summary.json (trf na
[2021-10-10 17:53:00] 2021-10-10 21:52:36,051 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 5.421, 'nthreads': 6.21, 'pss': 1070040.0, 'rchar': 886255.0, 
[2021-10-10 17:53:00] 2021-10-10 21:52:36,051 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-10-10 17:53:00] 2021-10-10 21:52:36,051 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-10-10 17:53:00] 2021-10-10 21:52:36,052 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-10-10 17:53:00] 2021-10-10 21:52:36,052 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-10-10 17:53:00] 2021-10-10 21:52:36,052 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-10-10 17:53:00] 2021-10-10 21:52:36,052 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 1 s
[2021-10-10 17:53:00] 2021-10-10 21:52:36,052 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 12 s
[2021-10-10 17:53:00] 2021-10-10 21:52:36,052 | INFO     | pilot.util.timing                | timing_report             | . total setup = 13 s
[2021-10-10 17:53:00] 2021-10-10 21:52:36,052 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2021-10-10 17:53:00] 2021-10-10 21:52:36,052 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 1106 s
[2021-10-10 17:53:00] 2021-10-10 21:52:36,053 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 0 s
[2021-10-10 17:53:00] 2021-10-10 21:52:36,053 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-10-10 17:53:00] 2021-10-10 21:52:36,053 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-10-10 17:53:00] 2021-10-10 21:52:36,054 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5216393475', 'state': 'finished', 'timestamp': '2021-10-10T17:52:35
[2021-10-10 17:53:00] 2021-10-10 21:52:36,054 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/4/heartbeat.json
[2021-10-10 17:53:00] 2021-10-10 21:52:36,054 | DEBUG    | pilot.control.job                | queue_monitor             | job 5216393475 was dequeued from the monitored payloads queue
[2021-10-10 17:53:00] 2021-10-10 21:52:36,216 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-10-10 17:53:00] 2021-10-10 21:52:36,290 | INFO     | pilot.control.job                | make_job_report           | 
[2021-10-10 17:53:00] 2021-10-10 21:52:36,291 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-10-10 17:53:00] 2021-10-10 21:52:36,291 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-10-10 17:53:00] 2021-10-10 21:52:36,291 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5216393475
[2021-10-10 17:53:00] 2021-10-10 21:52:36,291 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-10-10 17:53:00] 2021-10-10 21:52:36,291 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,291 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-10-10 17:53:00] 2021-10-10 21:52:36,291 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-10-10 17:53:00] 2021-10-10 21:52:36,291 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 1029 s
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | pid: 62520
[2021-10-10 17:53:00] 2021-10-10 21:52:36,292 | INFO     | pilot.control.job                | make_job_report           | pgrp: 62520
[2021-10-10 17:53:00] 2021-10-10 21:52:36,293 | INFO     | pilot.control.job                | make_job_report           | corecount: 2
[2021-10-10 17:53:00] 2021-10-10 21:52:36,293 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-10-10 17:53:00] 2021-10-10 21:52:36,293 | INFO     | pilot.control.job                | make_job_report           | sizes: {19294848: 3916082, 19294849: 3916247, 19295972: 3941411, 19295973: 3950879, 19295976: 395115
[2021-10-10 17:53:00] 2021-10-10 21:52:36,293 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-10-10 17:53:00] 2021-10-10 21:52:36,293 | INFO     | pilot.control.job                | make_job_report           | 
[2021-10-10 17:53:00] 2021-10-10 21:52:36,293 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/4:
[2021-10-10 17:53:00] 
[2021-10-10 17:53:00] 2021-10-10 21:52:36,293 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/4
[2021-10-10 17:53:00] 2021-10-10 21:52:36,324 | DEBUG    | pilot.control.job                | has_job_completed         | total 44460
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  1084389 Oct 10 17:33 agis_schedconf.cvmfs.json
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc        0 Oct 10 17:33 boinc_lockfile
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     8192 Oct 10 17:52 boinc_mmap_file
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc      532 Oct 10 17:47 boinc_task_state.xml
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  1972161 Oct 10 17:33 cric_ddmendpoints.json
[2021-10-10 17:53:00] -rw------- 1 boinc boinc   204068 Oct 10 17:52 d601d5ae-faa4-4d47-b47a-0b80b1baaac7_82064.1.job.log
[2021-10-10 17:53:00] -rw------- 1 boinc boinc   449010 Oct 10 17:52 d601d5ae-faa4-4d47-b47a-0b80b1baaac7_82064.1.job.log.tgz
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc 38971704 Oct 10 17:33 EVNT.04972714._000035.pool.root.1
[2021-10-10 17:53:00] -rw------- 1 boinc boinc     8615 Oct 10 17:52 heartbeat.json
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     6167 Oct 10 17:33 init_data.xml
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc   356635 Oct 10 17:33 input.tar.gz
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc      112 Oct 10 17:33 job.xml
[2021-10-10 17:53:00] -rw------- 1 boinc boinc     1023 Oct 10 17:52 memory_monitor_summary.json
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  1789351 Oct 10 17:52 output.1.d601d5ae-faa4-4d47-b47a-0b80b1baaac7_82064.pool.root
[2021-10-10 17:53:00] -rw------- 1 boinc boinc      536 Oct 10 17:52 output.list
[2021-10-10 17:53:00] -rw------- 1 boinc boinc      130 Oct 10 17:33 P26MDmSYvtzn7Olcko1bjSoqABFKDmABFKDmZr2WDmwbFKDmSolaIm.diag
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     2598 Oct 10 17:33 pandaJob.out
[2021-10-10 17:53:00] drwxrwx--- 3 boinc boinc     4096 Oct 10 17:52 PanDA_Pilot-5216393475/
[2021-10-10 17:53:00] drwx------ 4 boinc boinc     4096 Oct 10 17:33 pilot2/
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc   346720 Oct  8 13:39 pilot2.tar.gz
[2021-10-10 17:53:00] -rw------- 1 boinc boinc   184887 Oct 10 17:52 pilotlog.txt
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     3214 Oct 10 17:28 queuedata.json
[2021-10-10 17:53:00] -rwxr-xr-x 1 boinc boinc     6966 Oct 10 17:33 run_atlas*
[2021-10-10 17:53:00] -rwx------ 1 boinc boinc    20631 Oct 10 17:28 runpilot2-wrapper.sh*
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc      407 Oct 10 17:33 runtime_log
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     5565 Oct 10 17:33 runtime_log.err
[2021-10-10 17:53:00] drwxrwx--x 2 boinc boinc     4096 Oct 10 17:33 shared/
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc    16569 Oct 10 17:33 start_atlas.sh
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     2239 Oct 10 17:33 stderr.txt
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc      107 Oct 10 17:33 wrapper_26015_x86_64-pc-linux-gnu
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc       25 Oct 10 17:52 wrapper_checkpoint.txt
[2021-10-10 17:53:00] 2021-10-10 21:52:36,324 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,324 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,324 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,324 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,325 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,325 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,325 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,325 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,325 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,325 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,325 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,325 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,326 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,326 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,326 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,326 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,326 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,326 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,326 | INFO     | pilot.control.job                | has_job_completed         | job 5216393475 has completed (purged errors)
[2021-10-10 17:53:00] 2021-10-10 21:52:36,326 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-10-10 17:53:00] 2021-10-10 21:52:36,331 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/4/PanDA_Pilot-5216393475
[2021-10-10 17:53:00] 2021-10-10 21:52:37,336 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [62520]
[2021-10-10 17:53:00] 2021-10-10 21:52:37,337 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 62520
[2021-10-10 17:53:00] 2021-10-10 21:52:37,337 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-10-10 17:53:00] 2021-10-10 21:52:38,342 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-10-10 17:53:00] 2021-10-10 21:52:38,342 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=62520
[2021-10-10 17:53:00] 2021-10-10 21:52:38,432 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [62520] (in reverse order)
[2021-10-10 17:53:00] 2021-10-10 21:52:38,497 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-10-10 17:53:00] 2021-10-10 21:52:38,497 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-10-10 17:53:00] 2021-10-10 21:52:38,497 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-10-10 17:53:00] 2021-10-10 21:52:38,497 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-10-10 17:53:00] 2021-10-10 21:52:38,497 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-10-10 17:53:00] 2021-10-10 21:52:38,498 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-10-10 17:53:00] 2021-10-10 21:52:38,499 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-10-10 17:53:00] 2021-10-10 21:52:38,499 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-10-10 17:53:00] 2021-10-10 21:52:38,499 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-10-10 17:53:00] 2021-10-10 21:52:38,518 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-10-10 17:53:00] 2021-10-10 21:52:38,637 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-10-10 17:53:00] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-10-10 17:53:00] Distributor ID:	CentOS
[2021-10-10 17:53:00] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-10-10 17:53:00] Release:	7.8.2003
[2021-10-10 17:53:00] Codename:	Core
[2021-10-10 17:53:00] 2021-10-10 21:52:38,638 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-10-10 17:53:00] 2021-10-10 21:52:39,141 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/4
[2021-10-10 17:53:00] 2021-10-10 21:52:39,165 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (51296337920 B)
[2021-10-10 17:53:00] 2021-10-10 21:52:39,166 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-10-10 17:53:00] 2021-10-10 21:52:39,166 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:39,166 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-10-10 17:53:00] 2021-10-10 21:52:39,167 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-10-10 17:53:00] 2021-10-10 21:52:39,167 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:39,167 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-10-10 17:53:00] 2021-10-10 21:52:39,291 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-10-10 17:53:00] 2021-10-10 21:52:39,291 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:39,291 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:39,399 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:39,400 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:39,711 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:39,712 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:39,792 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-10-10 17:53:00] 2021-10-10 21:52:39,793 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:39,793 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:39,853 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:39,853 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:40,012 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:40,012 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:40,025 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:40,025 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:40,092 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-10-10 17:53:00] 2021-10-10 21:52:40,092 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:40,092 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:40,167 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:40,168 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:40,459 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:40,459 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:40,474 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:40,474 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:41,227 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-10-10 17:53:00] 2021-10-10 21:52:41,228 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:41,228 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:52:41,499 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-10-10 17:53:00] 2021-10-10 21:52:44,500 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-10-10 17:53:00] 2021-10-10 21:52:44,500 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:53:00,251 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s)
[2021-10-10 17:53:00] 2021-10-10 21:53:00,251 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-10-10 17:53:00] 2021-10-10 21:53:00,251 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-10-10 17:53:00] 2021-10-10 21:53:00,251 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-10-10 17:53:00] 2021-10-10 21:53:00,647 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-10-10 17:53:00] 2021-10-10 21:53:00,647 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-10-10 17:53:00] 2021-10-10 21:53:00,647 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-10-10 17:53:00] 2021-10-10 21:53:00,730 [wrapper] ==== pilot stdout END ====
[2021-10-10 17:53:00] 2021-10-10 21:53:00,736 [wrapper] ==== wrapper stdout RESUME ====
[2021-10-10 17:53:00] 2021-10-10 21:53:00,742 [wrapper] Pilot exit status: 0
[2021-10-10 17:53:00] 2021-10-10 21:53:00,761 [wrapper] pandaids: 5216393475
[2021-10-10 17:53:00] 2021-10-10 21:53:00,773 [wrapper] apfmon messages muted
[2021-10-10 17:53:00] 2021-10-10 21:53:00,780 [wrapper] Test setup, not cleaning
[2021-10-10 17:53:00] 2021-10-10 21:53:00,786 [wrapper] ==== wrapper stdout END ====
[2021-10-10 17:53:00] 2021-10-10 21:53:00,792 [wrapper] ==== wrapper stderr END ====
[2021-10-10 17:53:00] 2021-10-10 21:53:00,804 [wrapper] wrapperexiting ec=0, duration=1177
[2021-10-10 17:53:00] 2021-10-10 21:53:00,810 [wrapper] apfmon messages muted
[2021-10-10 17:53:00]  *** Error codes and diagnostics ***
[2021-10-10 17:53:00]     "exeErrorCode": 0,
[2021-10-10 17:53:00]     "exeErrorDiag": "",
[2021-10-10 17:53:00]     "pilotErrorCode": 0,
[2021-10-10 17:53:00]     "pilotErrorDiag": "",
[2021-10-10 17:53:00]  *** Listing of results directory ***
[2021-10-10 17:53:00] total 46744
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc   346720 Oct  8 13:39 pilot2.tar.gz
[2021-10-10 17:53:00] -rwx------ 1 boinc boinc    20631 Oct 10 17:28 runpilot2-wrapper.sh
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     3214 Oct 10 17:28 queuedata.json
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc      107 Oct 10 17:33 wrapper_26015_x86_64-pc-linux-gnu
[2021-10-10 17:53:00] -rwxr-xr-x 1 boinc boinc     6966 Oct 10 17:33 run_atlas
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc      112 Oct 10 17:33 job.xml
[2021-10-10 17:53:00] drwxrwx--x 2 boinc boinc     4096 Oct 10 17:33 shared
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     6167 Oct 10 17:33 init_data.xml
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc        0 Oct 10 17:33 boinc_lockfile
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc    16569 Oct 10 17:33 start_atlas.sh
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc   356635 Oct 10 17:33 input.tar.gz
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc 38971704 Oct 10 17:33 EVNT.04972714._000035.pool.root.1
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     2598 Oct 10 17:33 pandaJob.out
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  1084389 Oct 10 17:33 agis_schedconf.cvmfs.json
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  1972161 Oct 10 17:33 cric_ddmendpoints.json
[2021-10-10 17:53:00] drwx------ 4 boinc boinc     4096 Oct 10 17:33 pilot2
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc      532 Oct 10 17:47 boinc_task_state.xml
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  1789351 Oct 10 17:52 output.1.d601d5ae-faa4-4d47-b47a-0b80b1baaac7_82064.pool.root
[2021-10-10 17:53:00] -rw------- 1 boinc boinc     1023 Oct 10 17:52 memory_monitor_summary.json
[2021-10-10 17:53:00] -rw------- 1 boinc boinc   449010 Oct 10 17:52 d601d5ae-faa4-4d47-b47a-0b80b1baaac7_82064.1.job.log.tgz
[2021-10-10 17:53:00] -rw------- 1 boinc boinc     8615 Oct 10 17:52 heartbeat.json
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     8192 Oct 10 17:52 boinc_mmap_file
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc       25 Oct 10 17:52 wrapper_checkpoint.txt
[2021-10-10 17:53:00] -rw------- 1 boinc boinc     7517 Oct 10 17:53 pilotlog.txt
[2021-10-10 17:53:00] -rw------- 1 boinc boinc   218892 Oct 10 17:53 d601d5ae-faa4-4d47-b47a-0b80b1baaac7_82064.1.job.log
[2021-10-10 17:53:00] -rw------- 1 boinc boinc      536 Oct 10 17:53 output.list
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc     9549 Oct 10 17:53 runtime_log.err
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc      748 Oct 10 17:53 runtime_log
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  2478080 Oct 10 17:53 result.tar.gz
[2021-10-10 17:53:00] -rw------- 1 boinc boinc      561 Oct 10 17:53 P26MDmSYvtzn7Olcko1bjSoqABFKDmABFKDmZr2WDmwbFKDmSolaIm.diag
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc    29713 Oct 10 17:53 stderr.txt
[2021-10-10 17:53:00] HITS file was successfully produced:
[2021-10-10 17:53:00] -rw------- 1 boinc boinc 1789351 Oct 10 17:52 shared/HITS.pool.root.1
[2021-10-10 17:53:00]  *** Contents of shared directory: ***
[2021-10-10 17:53:00] total 42604
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc 38971704 Oct 10 17:33 ATLAS.root_0
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc    16569 Oct 10 17:33 start_atlas.sh
[2021-10-10 17:53:00] -rw-r--r-- 1 boinc boinc   356635 Oct 10 17:33 input.tar.gz
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  1789351 Oct 10 17:52 HITS.pool.root.1
[2021-10-10 17:53:00] -rw------- 1 boinc boinc  2478080 Oct 10 17:53 result.tar.gz
17:53:02 (53974): run_atlas exited; CPU time 997.265748
17:53:02 (53974): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN