Name fq8MDmT2jvzn7Olcko1bjSoqABFKDmABFKDmZr2WDmRfFKDm0sjY9m_0
Workunit 2135410
Created 15 Oct 2021, 21:35:28 UTC
Sent 15 Oct 2021, 21:36:59 UTC
Report deadline 22 Oct 2021, 21:36:59 UTC
Received 15 Oct 2021, 23:45:08 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4357
Run time 1 hours 17 min 49 sec
CPU time 37 min 59 sec
Validate state Valid
Credit 27.53
Device peak FLOPS 6.11 GFLOPS
Application version ATLAS Simulation v1.04 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.39 GB
Peak swap size 27.97 GB
Peak disk usage 84.59 MB

Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
18:01:08 (43312): wrapper (7.7.26015): starting
18:01:08 (43312): wrapper: running run_atlas (--nthreads 2)
[2021-10-15 18:01:08] Arguments: --nthreads 2
[2021-10-15 18:01:08] Threads: 2
[2021-10-15 18:01:08] Checking for CVMFS
[2021-10-15 18:01:09] Probing /cvmfs/atlas.cern.ch... OK
[2021-10-15 18:01:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2021-10-15 18:01:10] Running cvmfs_config stat atlas.cern.ch
[2021-10-15 18:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2021-10-15 18:01:12] 2.9.0.0 54183 7227 58308 94054 2 77 3886319 4194305 6416 130560 0 63378159 99.998 197185 756 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0
[2021-10-15 18:01:12] CVMFS is ok
[2021-10-15 18:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2021-10-15 18:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2021-10-15 18:01:12] Small home clusters do not require a local http proxy but it is suggested if
[2021-10-15 18:01:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2021-10-15 18:01:12] Further information can be found at the LHC@home message board.
[2021-10-15 18:01:12] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2021-10-15 18:01:12] Checking for singularity binary...
[2021-10-15 18:01:12] Using singularity found in PATH at /usr/local/bin/singularity
[2021-10-15 18:01:12] Running /usr/local/bin/singularity --version
[2021-10-15 18:01:12] singularity version 3.7.2+10-ga969f0f8c
[2021-10-15 18:01:12] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2021-10-15 18:01:14] E5-2670
[2021-10-15 18:01:14] Singularity works
[2021-10-15 18:01:14] Set ATHENA_PROC_NUMBER=2
[2021-10-15 18:01:14] Starting ATLAS job with PandaID=5221263868
[2021-10-15 18:01:14] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/9 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2021-10-15 19:18:53]  *** The last 200 lines of the pilot log: ***
[2021-10-15 19:18:54] }
[2021-10-15 19:18:54] 2021-10-15 23:17:49,951 | DEBUG    | pilot.user.atlas.utilities       | get_metadata_dict_from_txt | writing prmon dictionary to: /var/lib/boinc-client/slots/9/PanDA_Pilot-5221263868/memory_monitor_ou
[2021-10-15 19:18:54] 2021-10-15 23:17:49,958 | INFO     | pilot.util.container             | execute                   | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X P
[2021-10-15 19:18:54] 2021-10-15 23:17:55,066 | DEBUG    | pilot.user.atlas.common          | update_server             | sent prmon JSON dictionary to logstash server
[2021-10-15 19:18:54] 2021-10-15 23:17:55,066 | DEBUG    | pilot.user.atlas.common          | update_server             | stdout: ok
[2021-10-15 19:18:54] 2021-10-15 23:17:55,066 | DEBUG    | pilot.user.atlas.common          | update_server             | stderr:   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
[2021-10-15 19:18:54]                                  Dload  Upload   Total   Spent    Left  Speed
[2021-10-15 19:18:54] 
[2021-10-15 19:18:54]   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
[2021-10-15 19:18:54]   0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
[2021-10-15 19:18:54]   0     0    0     0    0     0      0      0 --:--:--  0:00:04 --:--:--     0
[2021-10-15 19:18:54] 100 18317    0     2  100 18315      0   4026  0:00:04  0:00:04 --:--:--  4026
[2021-10-15 19:18:54] 
[2021-10-15 19:18:54] 2021-10-15 23:17:55,067 | INFO     | pilot.control.job                | send_state                | pilot will not update the server (heartbeat message will be written to file)
[2021-10-15 19:18:54] 2021-10-15 23:17:55,067 | INFO     | pilot.control.job                | send_state                | job 5221263868 has finished - writing final server update
[2021-10-15 19:18:54] 2021-10-15 23:17:55,067 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics_string    | job definition core count: 2
[2021-10-15 19:18:54] 2021-10-15 23:17:55,069 | DEBUG    | pilot.api.analytics              | get_fitted_data           | removing tails from data to be fitted
[2021-10-15 19:18:54] 2021-10-15 23:17:55,069 | INFO     | pilot.api.analytics              | get_fitted_data           | fitting pss+swap vs Time
[2021-10-15 19:18:54] 2021-10-15 23:17:55,077 | INFO     | pilot.api.analytics              | get_fitted_data           | current memory leak: 29.53 B/s (using 56 data points, chi2=16604045)
[2021-10-15 19:18:54] 2021-10-15 23:17:55,078 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | job metrics="actualCoreCount=4 nEvents=2 dbTime=133.67 dbData=4308190 workDirSize=3094007 leak=29.53
[2021-10-15 19:18:54] 2021-10-15 23:17:55,078 | INFO     | pilot.control.job                | get_data_structure        | mean actualcorecount: 4.000000
[2021-10-15 19:18:54] 2021-10-15 23:17:55,078 | INFO     | pilot.control.job                | get_data_structure        | total number of processed events: 2 (read)
[2021-10-15 19:18:54] 2021-10-15 23:17:55,102 | INFO     | pilot.util.container             | execute                   | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2021-10-15 19:18:54] 2021-10-15 23:17:55,714 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-5221263868/memory_monitor_summary.json (trf na
[2021-10-15 19:18:54] 2021-10-15 23:17:55,721 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 6.174, 'nthreads': 6.904, 'pss': 1096889.0, 'rchar': 283817.0,
[2021-10-15 19:18:54] 2021-10-15 23:17:55,721 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2021-10-15 19:18:54] 2021-10-15 23:17:55,721 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 4 s
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 244 s
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | . total setup = 248 s
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 1 s
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 4010 s
[2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 5 s
[2021-10-15 19:18:54] 2021-10-15 23:17:55,723 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2021-10-15 19:18:54] 2021-10-15 23:17:55,723 | DEBUG    | pilot.control.job                | send_state                | is_harvester_mode(args) : False
[2021-10-15 19:18:54] 2021-10-15 23:17:55,724 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5221263868', 'state': 'finished', 'timestamp': '2021-10-15T19:17:55
[2021-10-15 19:18:54] 2021-10-15 23:17:55,724 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file /var/lib/boinc-client/slots/9/heartbeat.json
[2021-10-15 19:18:54] 2021-10-15 23:17:55,724 | DEBUG    | pilot.control.job                | queue_monitor             | job 5221263868 was dequeued from the monitored payloads queue
[2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | DEBUG    | pilot.control.job                | queue_monitor             | tmp job object deleted
[2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | INFO     | pilot.control.job                | make_job_report           | 
[2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5221263868
[2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 2470 s
[2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO     | pilot.control.job                | make_job_report           | pid: 55842
[2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO     | pilot.control.job                | make_job_report           | pgrp: 55842
[2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO     | pilot.control.job                | make_job_report           | corecount: 2
[2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO     | pilot.control.job                | make_job_report           | sizes: {19728808: 3900045, 19728809: 3900101, 19728810: 3900270, 19728813: 3900436, 19728821: 390037
[2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO     | pilot.control.job                | make_job_report           | 
[2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/9:
[2021-10-15 19:18:54] 
[2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO     | pilot.util.container             | execute                   | executing command: ls -lF /var/lib/boinc-client/slots/9
[2021-10-15 19:18:54] 2021-10-15 23:17:56,614 | DEBUG    | pilot.control.job                | has_job_completed         | total 45016
[2021-10-15 19:18:54] -rw------- 1 boinc boinc   409891 Oct 15 19:17 00f117ae-7ea3-445e-a439-c504e4787a53_66967.1.job.log
[2021-10-15 19:18:54] -rw------- 1 boinc boinc   475765 Oct 15 19:17 00f117ae-7ea3-445e-a439-c504e4787a53_66967.1.job.log.tgz
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  1085224 Oct 15 18:06 agis_schedconf.cvmfs.json
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc        0 Oct 15 18:01 boinc_lockfile
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     8192 Oct 15 19:17 boinc_mmap_file
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc      535 Oct 15 19:02 boinc_task_state.xml
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  1964225 Oct 15 18:06 cric_ddmendpoints.json
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 38217911 Oct 15 18:01 EVNT.04972714._000030.pool.root.1
[2021-10-15 19:18:54] -rw------- 1 boinc boinc      130 Oct 15 18:01 fq8MDmT2jvzn7Olcko1bjSoqABFKDmABFKDmZr2WDmRfFKDm0sjY9m.diag
[2021-10-15 19:18:54] -rw------- 1 boinc boinc     8628 Oct 15 19:17 heartbeat.json
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     6165 Oct 15 18:01 init_data.xml
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc   356638 Oct 15 18:01 input.tar.gz
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc      112 Oct 15 18:01 job.xml
[2021-10-15 19:18:54] -rw------- 1 boinc boinc     1019 Oct 15 19:17 memory_monitor_summary.json
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  2677069 Oct 15 19:17 output.1.00f117ae-7ea3-445e-a439-c504e4787a53_66967.pool.root
[2021-10-15 19:18:54] -rw------- 1 boinc boinc      536 Oct 15 19:17 output.list
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     2595 Oct 15 18:01 pandaJob.out
[2021-10-15 19:18:54] drwxrwx--- 3 boinc boinc     4096 Oct 15 19:17 PanDA_Pilot-5221263868/
[2021-10-15 19:18:54] drwx------ 4 boinc boinc     4096 Oct 15 18:06 pilot2/
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc   346720 Oct  8 13:39 pilot2.tar.gz
[2021-10-15 19:18:54] -rw------- 1 boinc boinc   390710 Oct 15 19:17 pilotlog.txt
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     3214 Oct 15 17:35 queuedata.json
[2021-10-15 19:18:54] -rwxr-xr-x 1 boinc boinc     6966 Oct 15 18:01 run_atlas*
[2021-10-15 19:18:54] -rwx------ 1 boinc boinc    20631 Oct 15 17:35 runpilot2-wrapper.sh*
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc      407 Oct 15 18:01 runtime_log
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     5565 Oct 15 18:01 runtime_log.err
[2021-10-15 19:18:54] drwxrwx--x 2 boinc boinc     4096 Oct 15 18:01 shared/
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc    16569 Oct 15 18:01 start_atlas.sh
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     2259 Oct 15 18:01 stderr.txt
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc      107 Oct 15 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc       26 Oct 15 19:17 wrapper_checkpoint.txt
[2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in has 1 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs has 0 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO     | pilot.control.job                | has_job_completed         | job 5221263868 has completed (purged errors)
[2021-10-15 19:18:54] 2021-10-15 23:17:56,620 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2021-10-15 19:18:54] 2021-10-15 23:17:56,633 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/9/PanDA_Pilot-5221263868
[2021-10-15 19:18:54] 2021-10-15 23:17:57,641 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [55842]
[2021-10-15 19:18:54] 2021-10-15 23:17:57,657 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 55842
[2021-10-15 19:18:54] 2021-10-15 23:17:57,657 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2021-10-15 19:18:54] 2021-10-15 23:17:58,661 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2021-10-15 19:18:54] 2021-10-15 23:17:58,662 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=55842
[2021-10-15 19:18:54] 2021-10-15 23:17:59,325 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [55842] (in reverse order)
[2021-10-15 19:18:54] 2021-10-15 23:18:00,228 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2021-10-15 19:18:54] 2021-10-15 23:18:00,234 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2021-10-15 19:18:54] 2021-10-15 23:18:00,234 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2021-10-15 19:18:54] 2021-10-15 23:18:00,235 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2021-10-15 19:18:54] 2021-10-15 23:18:00,235 | INFO     | root                             | retrieve                  | pilot has finished for previous job - re-establishing logging
[2021-10-15 19:18:54] 2021-10-15 23:18:00,271 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-10-15 19:18:54] 2021-10-15 23:18:00,277 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 2.12.6 (1)  ***
[2021-10-15 19:18:54] 2021-10-15 23:18:00,277 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-10-15 19:18:54] 2021-10-15 23:18:00,277 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2021-10-15 19:18:54] 2021-10-15 23:18:00,298 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2021-10-15 19:18:54] 2021-10-15 23:18:02,574 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2021-10-15 19:18:54] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2021-10-15 19:18:54] Distributor ID:	CentOS
[2021-10-15 19:18:54] Description:	CentOS Linux release 7.8.2003 (Core)
[2021-10-15 19:18:54] Release:	7.8.2003
[2021-10-15 19:18:54] Codename:	Core
[2021-10-15 19:18:54] 2021-10-15 23:18:02,574 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2021-10-15 19:18:54] 2021-10-15 23:18:03,081 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/9
[2021-10-15 19:18:54] 2021-10-15 23:18:03,494 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (44298141696 B)
[2021-10-15 19:18:54] 2021-10-15 23:18:03,501 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2021-10-15 19:18:54] 2021-10-15 23:18:03,501 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:03,502 | DEBUG    | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:03,504 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set
[2021-10-15 19:18:54] 2021-10-15 23:18:03,505 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2021-10-15 19:18:54] 2021-10-15 23:18:03,513 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:03,513 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:03,789 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:03,789 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:03,965 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:03,969 | DEBUG    | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:04,053 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:04,053 | DEBUG    | pilot.control.job                | validate                  | [job] validate thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:04,085 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2021-10-15 19:18:54] 2021-10-15 23:18:04,085 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:04,085 | DEBUG    | pilot.control.job                | control                   | [job] control thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:04,109 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:04,125 | DEBUG    | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:04,389 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:04,389 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:04,437 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2021-10-15 19:18:54] 2021-10-15 23:18:04,446 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:04,446 | DEBUG    | pilot.control.payload            | control                   | [payload] control thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:04,629 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2021-10-15 19:18:54] 2021-10-15 23:18:04,629 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:04,629 | DEBUG    | pilot.control.data               | control                   | [data] control thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:04,685 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:04,693 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:04,769 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2021-10-15 19:18:54] 2021-10-15 23:18:05,041 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2021-10-15 19:18:54] 2021-10-15 23:18:05,193 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2021-10-15 19:18:54] 2021-10-15 23:18:05,200 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:05,200 | DEBUG    | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:05,773 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:05,773 | DEBUG    | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:08,049 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2021-10-15 19:18:54] 2021-10-15 23:18:08,053 | DEBUG    | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:49,829 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 63 s)
[2021-10-15 19:18:54] 2021-10-15 23:18:49,829 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2021-10-15 19:18:54] 2021-10-15 23:18:49,829 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2021-10-15 19:18:54] 2021-10-15 23:18:49,829 | DEBUG    | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:50,209 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2021-10-15 19:18:54] 2021-10-15 23:18:50,209 | INFO     | root                             | wrap_up                   | traces error code: 0
[2021-10-15 19:18:54] 2021-10-15 23:18:50,213 | INFO     | root                             | wrap_up                   | pilot has finished
[2021-10-15 19:18:54] 2021-10-15 23:18:50,517 [wrapper] ==== pilot stdout END ====
[2021-10-15 19:18:54] 2021-10-15 23:18:50,637 [wrapper] ==== wrapper stdout RESUME ====
[2021-10-15 19:18:54] 2021-10-15 23:18:50,726 [wrapper] Pilot exit status: 0
[2021-10-15 19:18:54] 2021-10-15 23:18:51,225 [wrapper] pandaids: 5221263868
[2021-10-15 19:18:54] 2021-10-15 23:18:51,573 [wrapper] apfmon messages muted
[2021-10-15 19:18:54] 2021-10-15 23:18:51,696 [wrapper] Test setup, not cleaning
[2021-10-15 19:18:54] 2021-10-15 23:18:51,805 [wrapper] ==== wrapper stdout END ====
[2021-10-15 19:18:54] 2021-10-15 23:18:51,906 [wrapper] ==== wrapper stderr END ====
[2021-10-15 19:18:54] 2021-10-15 23:18:52,193 [wrapper] wrapperexiting ec=0, duration=4654
[2021-10-15 19:18:54] 2021-10-15 23:18:52,309 [wrapper] apfmon messages muted
[2021-10-15 19:18:54]  *** Error codes and diagnostics ***
[2021-10-15 19:18:54]     "exeErrorCode": 0,
[2021-10-15 19:18:54]     "exeErrorDiag": "",
[2021-10-15 19:18:54]     "pilotErrorCode": 0,
[2021-10-15 19:18:54]     "pilotErrorDiag": "",
[2021-10-15 19:18:54]  *** Listing of results directory ***
[2021-10-15 19:18:54] total 48188
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc   346720 Oct  8 13:39 pilot2.tar.gz
[2021-10-15 19:18:54] -rwx------ 1 boinc boinc    20631 Oct 15 17:35 runpilot2-wrapper.sh
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     3214 Oct 15 17:35 queuedata.json
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc      107 Oct 15 18:01 wrapper_26015_x86_64-pc-linux-gnu
[2021-10-15 19:18:54] -rwxr-xr-x 1 boinc boinc     6966 Oct 15 18:01 run_atlas
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc      112 Oct 15 18:01 job.xml
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     6165 Oct 15 18:01 init_data.xml
[2021-10-15 19:18:54] drwxrwx--x 2 boinc boinc     4096 Oct 15 18:01 shared
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc        0 Oct 15 18:01 boinc_lockfile
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc    16569 Oct 15 18:01 start_atlas.sh
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc   356638 Oct 15 18:01 input.tar.gz
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 38217911 Oct 15 18:01 EVNT.04972714._000030.pool.root.1
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     2595 Oct 15 18:01 pandaJob.out
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  1085224 Oct 15 18:06 agis_schedconf.cvmfs.json
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  1964225 Oct 15 18:06 cric_ddmendpoints.json
[2021-10-15 19:18:54] drwx------ 4 boinc boinc     4096 Oct 15 18:06 pilot2
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc      535 Oct 15 19:02 boinc_task_state.xml
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  2677069 Oct 15 19:17 output.1.00f117ae-7ea3-445e-a439-c504e4787a53_66967.pool.root
[2021-10-15 19:18:54] -rw------- 1 boinc boinc     1019 Oct 15 19:17 memory_monitor_summary.json
[2021-10-15 19:18:54] -rw------- 1 boinc boinc   475765 Oct 15 19:17 00f117ae-7ea3-445e-a439-c504e4787a53_66967.1.job.log.tgz
[2021-10-15 19:18:54] -rw------- 1 boinc boinc     8628 Oct 15 19:17 heartbeat.json
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     8192 Oct 15 19:18 boinc_mmap_file
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc       26 Oct 15 19:18 wrapper_checkpoint.txt
[2021-10-15 19:18:54] -rw------- 1 boinc boinc     7517 Oct 15 19:18 pilotlog.txt
[2021-10-15 19:18:54] -rw------- 1 boinc boinc   424715 Oct 15 19:18 00f117ae-7ea3-445e-a439-c504e4787a53_66967.1.job.log
[2021-10-15 19:18:54] -rw------- 1 boinc boinc      536 Oct 15 19:18 output.list
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc      748 Oct 15 19:18 runtime_log
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  3594240 Oct 15 19:18 result.tar.gz
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc     9549 Oct 15 19:18 runtime_log.err
[2021-10-15 19:18:54] -rw------- 1 boinc boinc      565 Oct 15 19:18 fq8MDmT2jvzn7Olcko1bjSoqABFKDmABFKDmZr2WDmRfFKDm0sjY9m.diag
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc    30451 Oct 15 19:18 stderr.txt
[2021-10-15 19:18:54] HITS file was successfully produced:
[2021-10-15 19:18:54] -rw------- 1 boinc boinc 2677069 Oct 15 19:17 shared/HITS.pool.root.1
[2021-10-15 19:18:54]  *** Contents of shared directory: ***
[2021-10-15 19:18:54] total 43824
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 38217911 Oct 15 18:01 ATLAS.root_0
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc    16569 Oct 15 18:01 start_atlas.sh
[2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc   356638 Oct 15 18:01 input.tar.gz
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  2677069 Oct 15 19:17 HITS.pool.root.1
[2021-10-15 19:18:54] -rw------- 1 boinc boinc  3594240 Oct 15 19:18 result.tar.gz
19:18:56 (43312): run_atlas exited; CPU time 2279.384502
19:18:56 (43312): called boinc_finish(0)

</stderr_txt>
]]>


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