Name | fq8MDmT2jvzn7Olcko1bjSoqABFKDmABFKDmZr2WDmRfFKDm0sjY9m_0 |
Workunit | 2135410 |
Created | 15 Oct 2021, 21:35:28 UTC |
Sent | 15 Oct 2021, 21:36:59 UTC |
Report deadline | 22 Oct 2021, 21:36:59 UTC |
Received | 15 Oct 2021, 23:45:08 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4357 |
Run time | 1 hours 17 min 49 sec |
CPU time | 37 min 59 sec |
Validate state | Valid |
Credit | 27.53 |
Device peak FLOPS | 6.11 GFLOPS |
Application version | ATLAS Simulation v1.04 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.39 GB |
Peak swap size | 27.97 GB |
Peak disk usage | 84.59 MB |
<core_client_version>7.9.3</core_client_version> <![CDATA[ <stderr_txt> 18:01:08 (43312): wrapper (7.7.26015): starting 18:01:08 (43312): wrapper: running run_atlas (--nthreads 2) [2021-10-15 18:01:08] Arguments: --nthreads 2 [2021-10-15 18:01:08] Threads: 2 [2021-10-15 18:01:08] Checking for CVMFS [2021-10-15 18:01:09] Probing /cvmfs/atlas.cern.ch... OK [2021-10-15 18:01:10] Probing /cvmfs/atlas-condb.cern.ch... OK [2021-10-15 18:01:10] Running cvmfs_config stat atlas.cern.ch [2021-10-15 18:01:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2021-10-15 18:01:12] 2.9.0.0 54183 7227 58308 94054 2 77 3886319 4194305 6416 130560 0 63378159 99.998 197185 756 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 0 [2021-10-15 18:01:12] CVMFS is ok [2021-10-15 18:01:12] Efficiency of ATLAS tasks can be improved by the following measure(s): [2021-10-15 18:01:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2021-10-15 18:01:12] Small home clusters do not require a local http proxy but it is suggested if [2021-10-15 18:01:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2021-10-15 18:01:12] Further information can be found at the LHC@home message board. [2021-10-15 18:01:12] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2021-10-15 18:01:12] Checking for singularity binary... [2021-10-15 18:01:12] Using singularity found in PATH at /usr/local/bin/singularity [2021-10-15 18:01:12] Running /usr/local/bin/singularity --version [2021-10-15 18:01:12] singularity version 3.7.2+10-ga969f0f8c [2021-10-15 18:01:12] Checking singularity works with /usr/local/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2021-10-15 18:01:14] E5-2670 [2021-10-15 18:01:14] Singularity works [2021-10-15 18:01:14] Set ATHENA_PROC_NUMBER=2 [2021-10-15 18:01:14] Starting ATLAS job with PandaID=5221263868 [2021-10-15 18:01:14] Running command: /usr/local/bin/singularity exec --pwd /var/lib/boinc-client/slots/9 -B /cvmfs,/var /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2021-10-15 19:18:53] *** The last 200 lines of the pilot log: *** [2021-10-15 19:18:54] } [2021-10-15 19:18:54] 2021-10-15 23:17:49,951 | DEBUG | pilot.user.atlas.utilities | get_metadata_dict_from_txt | writing prmon dictionary to: /var/lib/boinc-client/slots/9/PanDA_Pilot-5221263868/memory_monitor_ou [2021-10-15 19:18:54] 2021-10-15 23:17:49,958 | INFO | pilot.util.container | execute | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X P [2021-10-15 19:18:54] 2021-10-15 23:17:55,066 | DEBUG | pilot.user.atlas.common | update_server | sent prmon JSON dictionary to logstash server [2021-10-15 19:18:54] 2021-10-15 23:17:55,066 | DEBUG | pilot.user.atlas.common | update_server | stdout: ok [2021-10-15 19:18:54] 2021-10-15 23:17:55,066 | DEBUG | pilot.user.atlas.common | update_server | stderr: % Total % Received % Xferd Average Speed Time Time Time Current [2021-10-15 19:18:54] Dload Upload Total Spent Left Speed [2021-10-15 19:18:54] [2021-10-15 19:18:54] 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 [2021-10-15 19:18:54] 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 [2021-10-15 19:18:54] 0 0 0 0 0 0 0 0 --:--:-- 0:00:04 --:--:-- 0 [2021-10-15 19:18:54] 100 18317 0 2 100 18315 0 4026 0:00:04 0:00:04 --:--:-- 4026 [2021-10-15 19:18:54] [2021-10-15 19:18:54] 2021-10-15 23:17:55,067 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2021-10-15 19:18:54] 2021-10-15 23:17:55,067 | INFO | pilot.control.job | send_state | job 5221263868 has finished - writing final server update [2021-10-15 19:18:54] 2021-10-15 23:17:55,067 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 2 [2021-10-15 19:18:54] 2021-10-15 23:17:55,069 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2021-10-15 19:18:54] 2021-10-15 23:17:55,069 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time [2021-10-15 19:18:54] 2021-10-15 23:17:55,077 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 29.53 B/s (using 56 data points, chi2=16604045) [2021-10-15 19:18:54] 2021-10-15 23:17:55,078 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=4 nEvents=2 dbTime=133.67 dbData=4308190 workDirSize=3094007 leak=29.53 [2021-10-15 19:18:54] 2021-10-15 23:17:55,078 | INFO | pilot.control.job | get_data_structure | mean actualcorecount: 4.000000 [2021-10-15 19:18:54] 2021-10-15 23:17:55,078 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2021-10-15 19:18:54] 2021-10-15 23:17:55,102 | INFO | pilot.util.container | execute | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2021-10-15 19:18:54] 2021-10-15 23:17:55,714 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-5221263868/memory_monitor_summary.json (trf na [2021-10-15 19:18:54] 2021-10-15 23:17:55,721 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 6.174, 'nthreads': 6.904, 'pss': 1096889.0, 'rchar': 283817.0, [2021-10-15 19:18:54] 2021-10-15 23:17:55,721 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2021-10-15 19:18:54] 2021-10-15 23:17:55,721 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | .............................. [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | . initial setup = 4 s [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | . payload setup = 244 s [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | . total setup = 248 s [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | . stage-in = 1 s [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | . payload execution = 4010 s [2021-10-15 19:18:54] 2021-10-15 23:17:55,722 | INFO | pilot.util.timing | timing_report | . stage-out = 5 s [2021-10-15 19:18:54] 2021-10-15 23:17:55,723 | INFO | pilot.util.timing | timing_report | .............................. [2021-10-15 19:18:54] 2021-10-15 23:17:55,723 | DEBUG | pilot.control.job | send_state | is_harvester_mode(args) : False [2021-10-15 19:18:54] 2021-10-15 23:17:55,724 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5221263868', 'state': 'finished', 'timestamp': '2021-10-15T19:17:55 [2021-10-15 19:18:54] 2021-10-15 23:17:55,724 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file /var/lib/boinc-client/slots/9/heartbeat.json [2021-10-15 19:18:54] 2021-10-15 23:17:55,724 | DEBUG | pilot.control.job | queue_monitor | job 5221263868 was dequeued from the monitored payloads queue [2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | DEBUG | pilot.control.job | queue_monitor | tmp job object deleted [2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | INFO | pilot.control.job | make_job_report | [2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | INFO | pilot.control.job | make_job_report | job summary report [2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-10-15 19:18:54] 2021-10-15 23:17:56,163 | INFO | pilot.control.job | make_job_report | PanDA job id: 5221263868 [2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO | pilot.control.job | make_job_report | task id: NULL [2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO | pilot.control.job | make_job_report | errors: (none) [2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO | pilot.control.job | make_job_report | pilot state: finished [2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2021-10-15 19:18:54] 2021-10-15 23:17:56,164 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 2470 s [2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO | pilot.control.job | make_job_report | nevents: 2 [2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO | pilot.control.job | make_job_report | pid: 55842 [2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO | pilot.control.job | make_job_report | pgrp: 55842 [2021-10-15 19:18:54] 2021-10-15 23:17:56,165 | INFO | pilot.control.job | make_job_report | corecount: 2 [2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO | pilot.control.job | make_job_report | event service: False [2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO | pilot.control.job | make_job_report | sizes: {19728808: 3900045, 19728809: 3900101, 19728810: 3900270, 19728813: 3900436, 19728821: 390037 [2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO | pilot.control.job | make_job_report | [2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/9: [2021-10-15 19:18:54] [2021-10-15 19:18:54] 2021-10-15 23:17:56,166 | INFO | pilot.util.container | execute | executing command: ls -lF /var/lib/boinc-client/slots/9 [2021-10-15 19:18:54] 2021-10-15 23:17:56,614 | DEBUG | pilot.control.job | has_job_completed | total 45016 [2021-10-15 19:18:54] -rw------- 1 boinc boinc 409891 Oct 15 19:17 00f117ae-7ea3-445e-a439-c504e4787a53_66967.1.job.log [2021-10-15 19:18:54] -rw------- 1 boinc boinc 475765 Oct 15 19:17 00f117ae-7ea3-445e-a439-c504e4787a53_66967.1.job.log.tgz [2021-10-15 19:18:54] -rw------- 1 boinc boinc 1085224 Oct 15 18:06 agis_schedconf.cvmfs.json [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 0 Oct 15 18:01 boinc_lockfile [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 8192 Oct 15 19:17 boinc_mmap_file [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 535 Oct 15 19:02 boinc_task_state.xml [2021-10-15 19:18:54] -rw------- 1 boinc boinc 1964225 Oct 15 18:06 cric_ddmendpoints.json [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 38217911 Oct 15 18:01 EVNT.04972714._000030.pool.root.1 [2021-10-15 19:18:54] -rw------- 1 boinc boinc 130 Oct 15 18:01 fq8MDmT2jvzn7Olcko1bjSoqABFKDmABFKDmZr2WDmRfFKDm0sjY9m.diag [2021-10-15 19:18:54] -rw------- 1 boinc boinc 8628 Oct 15 19:17 heartbeat.json [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 6165 Oct 15 18:01 init_data.xml [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 356638 Oct 15 18:01 input.tar.gz [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 112 Oct 15 18:01 job.xml [2021-10-15 19:18:54] -rw------- 1 boinc boinc 1019 Oct 15 19:17 memory_monitor_summary.json [2021-10-15 19:18:54] -rw------- 1 boinc boinc 2677069 Oct 15 19:17 output.1.00f117ae-7ea3-445e-a439-c504e4787a53_66967.pool.root [2021-10-15 19:18:54] -rw------- 1 boinc boinc 536 Oct 15 19:17 output.list [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 2595 Oct 15 18:01 pandaJob.out [2021-10-15 19:18:54] drwxrwx--- 3 boinc boinc 4096 Oct 15 19:17 PanDA_Pilot-5221263868/ [2021-10-15 19:18:54] drwx------ 4 boinc boinc 4096 Oct 15 18:06 pilot2/ [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 346720 Oct 8 13:39 pilot2.tar.gz [2021-10-15 19:18:54] -rw------- 1 boinc boinc 390710 Oct 15 19:17 pilotlog.txt [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 3214 Oct 15 17:35 queuedata.json [2021-10-15 19:18:54] -rwxr-xr-x 1 boinc boinc 6966 Oct 15 18:01 run_atlas* [2021-10-15 19:18:54] -rwx------ 1 boinc boinc 20631 Oct 15 17:35 runpilot2-wrapper.sh* [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 407 Oct 15 18:01 runtime_log [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 5565 Oct 15 18:01 runtime_log.err [2021-10-15 19:18:54] drwxrwx--x 2 boinc boinc 4096 Oct 15 18:01 shared/ [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 16569 Oct 15 18:01 start_atlas.sh [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 2259 Oct 15 18:01 stderr.txt [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 107 Oct 15 18:01 wrapper_26015_x86_64-pc-linux-gnu [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 26 Oct 15 19:17 wrapper_checkpoint.txt [2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO | pilot.util.queuehandling | queue_report | queue jobs has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO | pilot.util.queuehandling | queue_report | queue payloads has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO | pilot.util.queuehandling | queue_report | queue data_in has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO | pilot.util.queuehandling | queue_report | queue data_out has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,617 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in has 1 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,618 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs has 0 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2021-10-15 19:18:54] 2021-10-15 23:17:56,619 | INFO | pilot.control.job | has_job_completed | job 5221263868 has completed (purged errors) [2021-10-15 19:18:54] 2021-10-15 23:17:56,620 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2021-10-15 19:18:54] 2021-10-15 23:17:56,633 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/9/PanDA_Pilot-5221263868 [2021-10-15 19:18:54] 2021-10-15 23:17:57,641 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [55842] [2021-10-15 19:18:54] 2021-10-15 23:17:57,657 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 55842 [2021-10-15 19:18:54] 2021-10-15 23:17:57,657 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2021-10-15 19:18:54] 2021-10-15 23:17:58,661 | INFO | pilot.util.processes | cleanup | collected zombie processes [2021-10-15 19:18:54] 2021-10-15 23:17:58,662 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=55842 [2021-10-15 19:18:54] 2021-10-15 23:17:59,325 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [55842] (in reverse order) [2021-10-15 19:18:54] 2021-10-15 23:18:00,228 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2021-10-15 19:18:54] 2021-10-15 23:18:00,234 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2021-10-15 19:18:54] 2021-10-15 23:18:00,234 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2021-10-15 19:18:54] 2021-10-15 23:18:00,235 | INFO | pilot.control.job | retrieve | ready for new job [2021-10-15 19:18:54] 2021-10-15 23:18:00,235 | INFO | root | retrieve | pilot has finished for previous job - re-establishing logging [2021-10-15 19:18:54] 2021-10-15 23:18:00,271 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-10-15 19:18:54] 2021-10-15 23:18:00,277 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 2.12.6 (1) *** [2021-10-15 19:18:54] 2021-10-15 23:18:00,277 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-10-15 19:18:54] 2021-10-15 23:18:00,277 | INFO | pilot.util.auxiliary | pilot_version_banner | [2021-10-15 19:18:54] 2021-10-15 23:18:00,298 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2021-10-15 19:18:54] 2021-10-15 23:18:02,574 | INFO | pilot.util.auxiliary | display_architecture_info | [2021-10-15 19:18:54] LSB Version: :core-4.1-amd64:core-4.1-noarch [2021-10-15 19:18:54] Distributor ID: CentOS [2021-10-15 19:18:54] Description: CentOS Linux release 7.8.2003 (Core) [2021-10-15 19:18:54] Release: 7.8.2003 [2021-10-15 19:18:54] Codename: Core [2021-10-15 19:18:54] 2021-10-15 23:18:02,574 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2021-10-15 19:18:54] 2021-10-15 23:18:03,081 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/9 [2021-10-15 19:18:54] 2021-10-15 23:18:03,494 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (44298141696 B) [2021-10-15 19:18:54] 2021-10-15 23:18:03,501 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2021-10-15 19:18:54] 2021-10-15 23:18:03,501 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:03,502 | DEBUG | pilot.control.job | retrieve | [job] retrieve thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:03,504 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2021-10-15 19:18:54] 2021-10-15 23:18:03,505 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2021-10-15 19:18:54] 2021-10-15 23:18:03,513 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:03,513 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:03,789 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:03,789 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:03,965 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:03,969 | DEBUG | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:04,053 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:04,053 | DEBUG | pilot.control.job | validate | [job] validate thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:04,085 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2021-10-15 19:18:54] 2021-10-15 23:18:04,085 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:04,085 | DEBUG | pilot.control.job | control | [job] control thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:04,109 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:04,125 | DEBUG | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:04,389 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:04,389 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:04,437 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2021-10-15 19:18:54] 2021-10-15 23:18:04,446 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:04,446 | DEBUG | pilot.control.payload | control | [payload] control thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:04,629 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2021-10-15 19:18:54] 2021-10-15 23:18:04,629 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:04,629 | DEBUG | pilot.control.data | control | [data] control thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:04,685 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:04,693 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:04,769 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2021-10-15 19:18:54] 2021-10-15 23:18:05,041 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2021-10-15 19:18:54] 2021-10-15 23:18:05,193 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2021-10-15 19:18:54] 2021-10-15 23:18:05,200 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:05,200 | DEBUG | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:05,773 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:05,773 | DEBUG | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:08,049 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2021-10-15 19:18:54] 2021-10-15 23:18:08,053 | DEBUG | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:49,829 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 63 s) [2021-10-15 19:18:54] 2021-10-15 23:18:49,829 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2021-10-15 19:18:54] 2021-10-15 23:18:49,829 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2021-10-15 19:18:54] 2021-10-15 23:18:49,829 | DEBUG | pilot.control.job | job_monitor | [job] job monitor thread has finished [2021-10-15 19:18:54] 2021-10-15 23:18:50,209 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2021-10-15 19:18:54] 2021-10-15 23:18:50,209 | INFO | root | wrap_up | traces error code: 0 [2021-10-15 19:18:54] 2021-10-15 23:18:50,213 | INFO | root | wrap_up | pilot has finished [2021-10-15 19:18:54] 2021-10-15 23:18:50,517 [wrapper] ==== pilot stdout END ==== [2021-10-15 19:18:54] 2021-10-15 23:18:50,637 [wrapper] ==== wrapper stdout RESUME ==== [2021-10-15 19:18:54] 2021-10-15 23:18:50,726 [wrapper] Pilot exit status: 0 [2021-10-15 19:18:54] 2021-10-15 23:18:51,225 [wrapper] pandaids: 5221263868 [2021-10-15 19:18:54] 2021-10-15 23:18:51,573 [wrapper] apfmon messages muted [2021-10-15 19:18:54] 2021-10-15 23:18:51,696 [wrapper] Test setup, not cleaning [2021-10-15 19:18:54] 2021-10-15 23:18:51,805 [wrapper] ==== wrapper stdout END ==== [2021-10-15 19:18:54] 2021-10-15 23:18:51,906 [wrapper] ==== wrapper stderr END ==== [2021-10-15 19:18:54] 2021-10-15 23:18:52,193 [wrapper] wrapperexiting ec=0, duration=4654 [2021-10-15 19:18:54] 2021-10-15 23:18:52,309 [wrapper] apfmon messages muted [2021-10-15 19:18:54] *** Error codes and diagnostics *** [2021-10-15 19:18:54] "exeErrorCode": 0, [2021-10-15 19:18:54] "exeErrorDiag": "", [2021-10-15 19:18:54] "pilotErrorCode": 0, [2021-10-15 19:18:54] "pilotErrorDiag": "", [2021-10-15 19:18:54] *** Listing of results directory *** [2021-10-15 19:18:54] total 48188 [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 346720 Oct 8 13:39 pilot2.tar.gz [2021-10-15 19:18:54] -rwx------ 1 boinc boinc 20631 Oct 15 17:35 runpilot2-wrapper.sh [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 3214 Oct 15 17:35 queuedata.json [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 107 Oct 15 18:01 wrapper_26015_x86_64-pc-linux-gnu [2021-10-15 19:18:54] -rwxr-xr-x 1 boinc boinc 6966 Oct 15 18:01 run_atlas [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 112 Oct 15 18:01 job.xml [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 6165 Oct 15 18:01 init_data.xml [2021-10-15 19:18:54] drwxrwx--x 2 boinc boinc 4096 Oct 15 18:01 shared [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 0 Oct 15 18:01 boinc_lockfile [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 16569 Oct 15 18:01 start_atlas.sh [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 356638 Oct 15 18:01 input.tar.gz [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 38217911 Oct 15 18:01 EVNT.04972714._000030.pool.root.1 [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 2595 Oct 15 18:01 pandaJob.out [2021-10-15 19:18:54] -rw------- 1 boinc boinc 1085224 Oct 15 18:06 agis_schedconf.cvmfs.json [2021-10-15 19:18:54] -rw------- 1 boinc boinc 1964225 Oct 15 18:06 cric_ddmendpoints.json [2021-10-15 19:18:54] drwx------ 4 boinc boinc 4096 Oct 15 18:06 pilot2 [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 535 Oct 15 19:02 boinc_task_state.xml [2021-10-15 19:18:54] -rw------- 1 boinc boinc 2677069 Oct 15 19:17 output.1.00f117ae-7ea3-445e-a439-c504e4787a53_66967.pool.root [2021-10-15 19:18:54] -rw------- 1 boinc boinc 1019 Oct 15 19:17 memory_monitor_summary.json [2021-10-15 19:18:54] -rw------- 1 boinc boinc 475765 Oct 15 19:17 00f117ae-7ea3-445e-a439-c504e4787a53_66967.1.job.log.tgz [2021-10-15 19:18:54] -rw------- 1 boinc boinc 8628 Oct 15 19:17 heartbeat.json [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 8192 Oct 15 19:18 boinc_mmap_file [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 26 Oct 15 19:18 wrapper_checkpoint.txt [2021-10-15 19:18:54] -rw------- 1 boinc boinc 7517 Oct 15 19:18 pilotlog.txt [2021-10-15 19:18:54] -rw------- 1 boinc boinc 424715 Oct 15 19:18 00f117ae-7ea3-445e-a439-c504e4787a53_66967.1.job.log [2021-10-15 19:18:54] -rw------- 1 boinc boinc 536 Oct 15 19:18 output.list [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 748 Oct 15 19:18 runtime_log [2021-10-15 19:18:54] -rw------- 1 boinc boinc 3594240 Oct 15 19:18 result.tar.gz [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 9549 Oct 15 19:18 runtime_log.err [2021-10-15 19:18:54] -rw------- 1 boinc boinc 565 Oct 15 19:18 fq8MDmT2jvzn7Olcko1bjSoqABFKDmABFKDmZr2WDmRfFKDm0sjY9m.diag [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 30451 Oct 15 19:18 stderr.txt [2021-10-15 19:18:54] HITS file was successfully produced: [2021-10-15 19:18:54] -rw------- 1 boinc boinc 2677069 Oct 15 19:17 shared/HITS.pool.root.1 [2021-10-15 19:18:54] *** Contents of shared directory: *** [2021-10-15 19:18:54] total 43824 [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 38217911 Oct 15 18:01 ATLAS.root_0 [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 16569 Oct 15 18:01 start_atlas.sh [2021-10-15 19:18:54] -rw-r--r-- 1 boinc boinc 356638 Oct 15 18:01 input.tar.gz [2021-10-15 19:18:54] -rw------- 1 boinc boinc 2677069 Oct 15 19:17 HITS.pool.root.1 [2021-10-15 19:18:54] -rw------- 1 boinc boinc 3594240 Oct 15 19:18 result.tar.gz 19:18:56 (43312): run_atlas exited; CPU time 2279.384502 19:18:56 (43312): called boinc_finish(0) </stderr_txt> ]]>
©2024 CERN