Name 6VGNDmD1Nx0n7Olcko1bjSoqABFKDmABFKDmKFbSDmUOFKDmylo3qm_1
Workunit 2176909
Created 9 Apr 2022, 11:52:58 UTC
Sent 9 Apr 2022, 12:08:03 UTC
Report deadline 16 Apr 2022, 12:08:03 UTC
Received 9 Apr 2022, 15:09:53 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4055
Run time 11 min 14 sec
CPU time 12 min 50 sec
Validate state Valid
Credit 10.53
Device peak FLOPS 6.55 GFLOPS
Application version ATLAS Simulation v1.07 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.36 GB
Peak swap size 3.63 GB
Peak disk usage 80.80 MB

Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:08:10 (9606): wrapper (7.7.26015): starting
14:08:10 (9606): wrapper: running run_atlas (--nthreads 2)
[2022-04-09 14:08:10] Arguments: --nthreads 2
[2022-04-09 14:08:10] Threads: 2
[2022-04-09 14:08:10] Checking for CVMFS
[2022-04-09 14:08:11] Probing /cvmfs/atlas.cern.ch... OK
[2022-04-09 14:08:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-04-09 14:08:11] Running cvmfs_config stat atlas.cern.ch
[2022-04-09 14:08:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-04-09 14:08:11] 2.5.1.0 13013 457921 82876 102977 1 77 3774927 4096001 1 65024 1 756637204 99.9766 19349686 16836 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://137.138.150.196:3128 1
[2022-04-09 14:08:11] CVMFS is ok
[2022-04-09 14:08:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2022-04-09 14:08:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2022-04-09 14:08:11] Further information can be found at the LHC@home message board.
[2022-04-09 14:08:11] Using singularity image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-04-09 14:08:11] Checking for singularity binary...
[2022-04-09 14:08:11] which: no singularity in (/usr/sue/sbin:/usr/sue/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/opt/puppetlabs/bin:/root/bin)
[2022-04-09 14:08:11] Singularity is not installed, using version from CVMFS
[2022-04-09 14:08:11] Checking singularity works with /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-04-09 14:08:12] dcameron04.cern.ch
[2022-04-09 14:08:12] Singularity works
[2022-04-09 14:08:12] Set ATHENA_PROC_NUMBER=2
[2022-04-09 14:08:12] Starting ATLAS job with PandaID=5415285146
[2022-04-09 14:08:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/singularity/x86_64-el7/current/bin/singularity exec --pwd /root/boinc/slots/0 -B /cvmfs,/root /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-04-09 14:19:22]  *** The last 200 lines of the pilot log: ***
[2022-04-09 14:19:22]  allow_wan=False
[2022-04-09 14:19:22]  checksum={'adler32': '50139fb0'}
[2022-04-09 14:19:22]  dataset=hc_test.gangarbt.hc20245266.tid1036.BOINC-TEST.34
[2022-04-09 14:19:22]  ddm_activity=['write_lan', 'write_wan']
[2022-04-09 14:19:22]  ddmendpoint=NDGF-T1_DATADISK
[2022-04-09 14:19:22]  direct_access_lan=False
[2022-04-09 14:19:22]  direct_access_wan=False
[2022-04-09 14:19:22]  domain=
[2022-04-09 14:19:22]  filesize=2055388
[2022-04-09 14:19:22]  filetype=output
[2022-04-09 14:19:22]  guid=8C318ACC-E288-6D46-9C71-FE83A1A9880D
[2022-04-09 14:19:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-04-09 14:19:22]  is_tar=False
[2022-04-09 14:19:22]  lfn=output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root
[2022-04-09 14:19:22]  mtime=0
[2022-04-09 14:19:22]  protocol_id=None
[2022-04-09 14:19:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2022-04-09 14:19:22]  replicas=None
[2022-04-09 14:19:22]  scope=hc_test
[2022-04-09 14:19:22]  status=None
[2022-04-09 14:19:22]  status_code=0
[2022-04-09 14:19:22]  storage_token=
[2022-04-09 14:19:22]  surl=/root/boinc/slots/0/PanDA_Pilot-5415285146/output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root
[2022-04-09 14:19:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e2/f9/output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root
[2022-04-09 14:19:22]  workdir=None
[2022-04-09 14:19:22] ]
[2022-04-09 14:19:22] 2022-04-09 12:19:02,512 | INFO     | transferring file output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root from /root/boinc/slots/0/PanDA_Pilot-5415285146/output.1.2713d1a5-45ea-46cd-a73f-2d
[2022-04-09 14:19:22] 2022-04-09 12:19:02,512 | INFO     | executing command: /usr/bin/env mv /root/boinc/slots/0/PanDA_Pilot-5415285146/output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root /root/boinc/slots/0/out
[2022-04-09 14:19:22] 2022-04-09 12:19:02,549 | INFO     | Adding to output.list: output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e2/f9/output.1.
[2022-04-09 14:19:22] 2022-04-09 12:19:02,550 | INFO     | executing command: ps aux -q 14320
[2022-04-09 14:19:22] 2022-04-09 12:19:02,616 | INFO     | summary of transferred files:
[2022-04-09 14:19:22] 2022-04-09 12:19:02,616 | INFO     |  -- lfn=output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root, status_code=0, status=transferred
[2022-04-09 14:19:22] 2022-04-09 12:19:02,616 | INFO     | executing command: ls -lF /root/boinc/slots/0/PanDA_Pilot-5415285146
[2022-04-09 14:19:22] 2022-04-09 12:19:02,671 | WARNING  | failed to remove directory: /root/boinc/slots/0/PanDA_Pilot-5415285146/output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root_001 (2, No such file or direct
[2022-04-09 14:19:22] 2022-04-09 12:19:02,672 | WARNING  | failed to remove directory: /root/boinc/slots/0/PanDA_Pilot-5415285146/output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root_002 (2, No such file or direct
[2022-04-09 14:19:22] 2022-04-09 12:19:02,673 | INFO     | executing command: ls -lF /root/boinc/slots/0/PanDA_Pilot-5415285146
[2022-04-09 14:19:22] 2022-04-09 12:19:02,709 | INFO     | will create archive /root/boinc/slots/0/2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz
[2022-04-09 14:19:22] 2022-04-09 12:19:02,710 | INFO     | executing command: pwd;tar cvfz /root/boinc/slots/0/2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz tarball_PandaJob_5415285146_BOINC-TEST --dereference -
[2022-04-09 14:19:22] 2022-04-09 12:19:02,808 | INFO     | copied /root/boinc/slots/0/2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz to /root/boinc/slots/0/PanDA_Pilot-5415285146
[2022-04-09 14:19:22] 2022-04-09 12:19:02,808 | INFO     | prepare to stage-out 1 log file(s)
[2022-04-09 14:19:22] 2022-04-09 12:19:02,808 | INFO     | stage-out will not be done in a container
[2022-04-09 14:19:22] 2022-04-09 12:19:02,811 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2022-04-09 14:19:22] 2022-04-09 12:19:02,811 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2022-04-09 14:19:22] 2022-04-09 12:19:02,811 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2022-04-09 14:19:22] 2022-04-09 12:19:02,811 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2022-04-09 14:19:22] 2022-04-09 12:19:02,961 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2022-04-09 14:19:22] 2022-04-09 12:19:02,961 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2022-04-09 14:19:22]  activity=['pl', 'pw', 'w', 'default']
[2022-04-09 14:19:22]  allow_lan=True
[2022-04-09 14:19:22]  allow_wan=False
[2022-04-09 14:19:22]  checksum={'adler32': 'e2a4cdca'}
[2022-04-09 14:19:22]  dataset=hc_test.gangarbt.hc20245266.tid1036.BOINC-TEST.34
[2022-04-09 14:19:22]  ddm_activity=['write_lan', 'write_wan']
[2022-04-09 14:19:22]  ddmendpoint=NDGF-T1_DATADISK
[2022-04-09 14:19:22]  direct_access_lan=False
[2022-04-09 14:19:22]  direct_access_wan=False
[2022-04-09 14:19:22]  domain=
[2022-04-09 14:19:22]  filesize=438007
[2022-04-09 14:19:22]  filetype=log
[2022-04-09 14:19:22]  guid=127e0c5a-3494-4398-a72f-cdd286bf0177
[2022-04-09 14:19:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-04-09 14:19:22]  is_tar=False
[2022-04-09 14:19:22]  lfn=2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz
[2022-04-09 14:19:22]  mtime=0
[2022-04-09 14:19:22]  protocol_id=None
[2022-04-09 14:19:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}, {'endpoint': 'srm://srm.ndgf.org:8443/srm/managerv2?SFN=', 'flavour': '
[2022-04-09 14:19:22]  replicas=None
[2022-04-09 14:19:22]  scope=hc_test
[2022-04-09 14:19:22]  status=None
[2022-04-09 14:19:22]  status_code=0
[2022-04-09 14:19:22]  storage_token=
[2022-04-09 14:19:22]  surl=/root/boinc/slots/0/PanDA_Pilot-5415285146/2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz
[2022-04-09 14:19:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/db/06/2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz
[2022-04-09 14:19:22]  workdir=None
[2022-04-09 14:19:22] ]
[2022-04-09 14:19:22] 2022-04-09 12:19:03,024 | INFO     | transferring file 2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz from /root/boinc/slots/0/PanDA_Pilot-5415285146/2713d1a5-45ea-46cd-a73f-2dd90004d256_535
[2022-04-09 14:19:22] 2022-04-09 12:19:03,024 | INFO     | executing command: /usr/bin/env mv /root/boinc/slots/0/PanDA_Pilot-5415285146/2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz /root/boinc/slots/0/2713d1a5
[2022-04-09 14:19:22] 2022-04-09 12:19:03,060 | INFO     | Adding to output.list: 2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/db/06/2713d1a5-45ea-
[2022-04-09 14:19:22] 2022-04-09 12:19:03,061 | INFO     | executing command: ps aux -q 14320
[2022-04-09 14:19:22] 2022-04-09 12:19:03,107 | INFO     | summary of transferred files:
[2022-04-09 14:19:22] 2022-04-09 12:19:03,107 | INFO     |  -- lfn=2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz, status_code=0, status=transferred
[2022-04-09 14:19:22] 2022-04-09 12:19:03,107 | INFO     | stage-out finished correctly
[2022-04-09 14:19:22] 2022-04-09 12:19:04,608 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2022-04-09 14:19:22] 2022-04-09 12:19:07,538 | INFO     | job 5415285146 has state=finished
[2022-04-09 14:19:22] 2022-04-09 12:19:07,539 | INFO     | preparing for final server update for job 5415285146 in state='finished'
[2022-04-09 14:19:22] 2022-04-09 12:19:07,539 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2022-04-09 14:19:22] 2022-04-09 12:19:07,539 | INFO     | job 5415285146 has finished - writing final server update
[2022-04-09 14:19:22] 2022-04-09 12:19:07,540 | INFO     | will not add max space = -33188239 B to job metrics
[2022-04-09 14:19:22] 2022-04-09 12:19:07,540 | WARNING  | wrong length of table data, x=[1649506450.0, 1649506511.0, 1649506572.0], y=[1657251.0, 1675657.0, 1556783.0] (must be same and length>=4)
[2022-04-09 14:19:22] 2022-04-09 12:19:07,541 | INFO     | mean actualcorecount: 3.625
[2022-04-09 14:19:22] 2022-04-09 12:19:07,541 | INFO     | total number of processed events: 2 (read)
[2022-04-09 14:19:22] 2022-04-09 12:19:07,541 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-04-09 14:19:22] 2022-04-09 12:19:07,586 | INFO     | using path: /root/boinc/slots/0/PanDA_Pilot-5415285146/memory_monitor_summary.json (trf name=prmon)
[2022-04-09 14:19:22] 2022-04-09 12:19:07,587 | INFO     | extracted standard info from prmon json
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | extracted standard memory fields from prmon json
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | ..............................
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | . Timing measurements:
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | . get job = 0 s
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | . initial setup = 1 s
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | . payload setup = 13 s
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | . total setup = 14 s
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | . stage-in = 0 s
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | . payload execution = 601 s
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | . stage-out = 0 s
[2022-04-09 14:19:22] 2022-04-09 12:19:07,588 | INFO     | ..............................
[2022-04-09 14:19:22] 2022-04-09 12:19:07,970 | INFO     | 
[2022-04-09 14:19:22] 2022-04-09 12:19:07,970 | INFO     | job summary report
[2022-04-09 14:19:22] 2022-04-09 12:19:07,970 | INFO     | --------------------------------------------------
[2022-04-09 14:19:22] 2022-04-09 12:19:07,970 | INFO     | PanDA job id: 5415285146
[2022-04-09 14:19:22] 2022-04-09 12:19:07,970 | INFO     | task id: NULL
[2022-04-09 14:19:22] 2022-04-09 12:19:07,970 | INFO     | errors: (none)
[2022-04-09 14:19:22] 2022-04-09 12:19:07,970 | INFO     | status: LOG_TRANSFER = DONE 
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | pilot state: finished 
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | transexitcode: 0
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | exeerrorcode: 0
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | exeerrordiag: 
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | exitcode: 0
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | exitmsg: OK
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | cpuconsumptiontime: 813 s
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | nevents: 2
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | neventsw: 0
[2022-04-09 14:19:22] 2022-04-09 12:19:07,971 | INFO     | pid: 17333
[2022-04-09 14:19:22] 2022-04-09 12:19:07,972 | INFO     | pgrp: 17333
[2022-04-09 14:19:22] 2022-04-09 12:19:07,972 | INFO     | corecount: 2
[2022-04-09 14:19:22] 2022-04-09 12:19:07,972 | INFO     | event service: False
[2022-04-09 14:19:22] 2022-04-09 12:19:07,972 | INFO     | sizes: {0: 3417646, 1: 3418000, 12: 3418000, 618: 3440828, 619: 3450816, 621: 3450872, 624: 3451222}
[2022-04-09 14:19:22] 2022-04-09 12:19:07,972 | INFO     | --------------------------------------------------
[2022-04-09 14:19:22] 2022-04-09 12:19:07,972 | INFO     | 
[2022-04-09 14:19:22] 2022-04-09 12:19:07,972 | INFO     | executing command: ls -lF /root/boinc/slots/0
[2022-04-09 14:19:22] 2022-04-09 12:19:08,008 | INFO     | queue jobs had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue payloads had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue data_in had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue data_out had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue current_data_in had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue completed_jobids has 1 job(s)
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | job 5415285146 has completed (purged errors)
[2022-04-09 14:19:22] 2022-04-09 12:19:08,010 | INFO     | overall cleanup function is called
[2022-04-09 14:19:22] 2022-04-09 12:19:09,020 | INFO     | --- collectZombieJob: --- 10, [17333]
[2022-04-09 14:19:22] 2022-04-09 12:19:09,020 | INFO     | zombie collector trying to kill pid 17333
[2022-04-09 14:19:22] 2022-04-09 12:19:09,020 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-04-09 14:19:22] 2022-04-09 12:19:10,026 | INFO     | collected zombie processes
[2022-04-09 14:19:22] 2022-04-09 12:19:10,026 | INFO     | will now attempt to kill all subprocesses of pid=17333
[2022-04-09 14:19:22] 2022-04-09 12:19:10,085 | INFO     | process IDs to be killed: [17333] (in reverse order)
[2022-04-09 14:19:22] 2022-04-09 12:19:10,158 | WARNING  | found no corresponding commands to process id(s)
[2022-04-09 14:19:22] 2022-04-09 12:19:10,158 | INFO     | Do not look for orphan processes in BOINC jobs
[2022-04-09 14:19:22] 2022-04-09 12:19:10,158 | INFO     | ready for new job
[2022-04-09 14:19:22] 2022-04-09 12:19:10,159 | INFO     | pilot has finished for previous job - re-establishing logging
[2022-04-09 14:19:22] 2022-04-09 12:19:10,160 | INFO     | ****************************************
[2022-04-09 14:19:22] 2022-04-09 12:19:10,160 | INFO     | ***  PanDA Pilot version 3.2.4 (16)  ***
[2022-04-09 14:19:22] 2022-04-09 12:19:10,160 | INFO     | ****************************************
[2022-04-09 14:19:22] 2022-04-09 12:19:10,160 | INFO     | 
[2022-04-09 14:19:22] 2022-04-09 12:19:10,160 | INFO     | pilot is running in a VM
[2022-04-09 14:19:22] 2022-04-09 12:19:10,160 | INFO     | architecture information:
[2022-04-09 14:19:22] 2022-04-09 12:19:10,299 | INFO     | 
[2022-04-09 14:19:22] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-04-09 14:19:22] Distributor ID:	CentOS
[2022-04-09 14:19:22] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-04-09 14:19:22] Release:	7.9.2009
[2022-04-09 14:19:22] Codename:	Core
[2022-04-09 14:19:22] 2022-04-09 12:19:10,300 | INFO     | ****************************************
[2022-04-09 14:19:22] 2022-04-09 12:19:10,830 | INFO     | sufficient remaining disk space (27462205440 B)
[2022-04-09 14:19:22] 2022-04-09 12:19:10,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2022-04-09 14:19:22] 2022-04-09 12:19:10,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-04-09 14:19:22] 2022-04-09 12:19:10,831 | WARNING  | aborting monitor loop since graceful_stop has been set
[2022-04-09 14:19:22] 2022-04-09 12:19:10,832 | INFO     | [monitor] control thread has ended
[2022-04-09 14:19:22] 2022-04-09 12:19:11,191 | INFO     | [payload] execute_payloads thread has finished
[2022-04-09 14:19:22] 2022-04-09 12:19:11,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2022-04-09 14:19:22] 2022-04-09 12:19:11,275 | INFO     | [payload] failed_post thread has finished
[2022-04-09 14:19:22] 2022-04-09 12:19:11,509 | INFO     | [payload] validate_pre thread has finished
[2022-04-09 14:19:22] 2022-04-09 12:19:11,904 | INFO     | [payload] validate_post thread has finished
[2022-04-09 14:19:22] 2022-04-09 12:19:12,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2022-04-09 14:19:22] 2022-04-09 12:19:15,092 | WARNING  | no jobs in monitored_payloads queue (waited for 73 s)
[2022-04-09 14:19:22] 2022-04-09 12:19:22,460 | INFO     | [payload] run_realtimelog thread has finished
[2022-04-09 14:19:22] 2022-04-09 12:19:22,565 | INFO     | end of generic workflow (traces error code: 0)
[2022-04-09 14:19:22] 2022-04-09 12:19:22,566 | INFO     | traces error code: 0
[2022-04-09 14:19:22] 2022-04-09 12:19:22,566 | INFO     | pilot has finished
[2022-04-09 14:19:22] 2022-04-09 12:19:22,648 [wrapper] ==== pilot stdout END ====
[2022-04-09 14:19:22] 2022-04-09 12:19:22,655 [wrapper] ==== wrapper stdout RESUME ====
[2022-04-09 14:19:22] 2022-04-09 12:19:22,662 [wrapper] pilotpid: 14320
[2022-04-09 14:19:22] 2022-04-09 12:19:22,669 [wrapper] Pilot exit status: 0
[2022-04-09 14:19:22] 2022-04-09 12:19:22,695 [wrapper] pandaids: 5415285146
[2022-04-09 14:19:22] 2022-04-09 12:19:22,709 [wrapper] apfmon messages muted
[2022-04-09 14:19:22] 2022-04-09 12:19:22,716 [wrapper] Test setup, not cleaning
[2022-04-09 14:19:22] 2022-04-09 12:19:22,723 [wrapper] ==== wrapper stdout END ====
[2022-04-09 14:19:22] 2022-04-09 12:19:22,731 [wrapper] ==== wrapper stderr END ====
[2022-04-09 14:19:22] 2022-04-09 12:19:22,745 [wrapper] wrapperexiting ec=0, duration=670
[2022-04-09 14:19:22] 2022-04-09 12:19:22,752 [wrapper] apfmon messages muted
[2022-04-09 14:19:22]  *** Error codes and diagnostics ***
[2022-04-09 14:19:22]     "exeErrorCode": 0,
[2022-04-09 14:19:22]     "exeErrorDiag": "",
[2022-04-09 14:19:22]     "pilotErrorCode": 0,
[2022-04-09 14:19:22]     "pilotErrorDiag": "",
[2022-04-09 14:19:22]  *** Listing of results directory ***
[2022-04-09 14:19:22] total 45936
[2022-04-09 14:19:22] -rw-r--r--. 1 root root   356726 Apr  9 12:32 pilot2.tar.gz
[2022-04-09 14:19:22] -rwx------. 1 4871 1028    27041 Apr  9 13:01 runpilot2-wrapper.sh
[2022-04-09 14:19:22] -rw-r--r--. 1 root root     4534 Apr  9 13:01 queuedata.json
[2022-04-09 14:19:22] -rw-r--r--. 1 root root      107 Apr  9 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2022-04-09 14:19:22] -rwxr-xr-x. 1 root root     6969 Apr  9 14:08 run_atlas
[2022-04-09 14:19:22] -rw-r--r--. 1 root root      112 Apr  9 14:08 job.xml
[2022-04-09 14:19:22] -rw-r--r--. 2 root root 37658468 Apr  9 14:08 EVNT.04972714._000029.pool.root.1
[2022-04-09 14:19:22] -rw-r--r--. 1 root root     5909 Apr  9 14:08 init_data.xml
[2022-04-09 14:19:22] -rw-r--r--. 2 root root    16589 Apr  9 14:08 start_atlas.sh
[2022-04-09 14:19:22] drwxrwx--x. 2 root root       68 Apr  9 14:08 shared
[2022-04-09 14:19:22] -rw-r--r--. 2 root root   368174 Apr  9 14:08 input.tar.gz
[2022-04-09 14:19:22] -rw-r--r--. 1 root root        0 Apr  9 14:08 boinc_lockfile
[2022-04-09 14:19:22] -rw-r--r--. 1 root root     2673 Apr  9 14:08 pandaJob.out
[2022-04-09 14:19:22] -rw-------. 1 root root      414 Apr  9 14:08 setup.sh.local
[2022-04-09 14:19:22] -rw-------. 1 root root  1009135 Apr  9 14:08 agis_schedconf.cvmfs.json
[2022-04-09 14:19:22] -rw-------. 1 root root  2294376 Apr  9 14:08 agis_ddmendpoints.agis.ALL.json
[2022-04-09 14:19:22] drwxr-xr-x. 4  320  320      260 Apr  9 14:08 pilot3
[2022-04-09 14:19:22] -rw-r--r--. 1 root root      532 Apr  9 14:15 boinc_task_state.xml
[2022-04-09 14:19:22] -rw-------. 1 root root  2055388 Apr  9 14:18 output.1.2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.pool.root
[2022-04-09 14:19:22] -rw-------. 1 root root     1018 Apr  9 14:18 memory_monitor_summary.json
[2022-04-09 14:19:22] -rw-------. 1 root root   438007 Apr  9 14:19 2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log.tgz
[2022-04-09 14:19:22] -rw-------. 1 root root     7905 Apr  9 14:19 heartbeat.json
[2022-04-09 14:19:22] -rw-r--r--. 1 root root     8192 Apr  9 14:19 boinc_mmap_file
[2022-04-09 14:19:22] -rw-r--r--. 1 root root       24 Apr  9 14:19 wrapper_checkpoint.txt
[2022-04-09 14:19:22] -rw-------. 1 root root     2038 Apr  9 14:19 pilotlog.txt
[2022-04-09 14:19:22] -rw-------. 1 root root    80988 Apr  9 14:19 2713d1a5-45ea-46cd-a73f-2dd90004d256_53571.1.job.log
[2022-04-09 14:19:22] -rw-------. 1 root root      464 Apr  9 14:19 output.list
[2022-04-09 14:19:22] -rw-r--r--. 1 root root      748 Apr  9 14:19 runtime_log
[2022-04-09 14:19:22] -rw-------. 1 root root  2590720 Apr  9 14:19 result.tar.gz
[2022-04-09 14:19:22] -rw-r--r--. 1 root root    10398 Apr  9 14:19 runtime_log.err
[2022-04-09 14:19:22] -rw-------. 1 root root      577 Apr  9 14:19 6VGNDmD1Nx0n7Olcko1bjSoqABFKDmABFKDmKFbSDmUOFKDmylo3qm.diag
[2022-04-09 14:19:22] -rw-r--r--. 1 root root    21484 Apr  9 14:19 stderr.txt
[2022-04-09 14:19:22] HITS file was successfully produced:
[2022-04-09 14:19:22] -rw-------. 1 root root 2055388 Apr  9 14:18 shared/HITS.pool.root.1
[2022-04-09 14:19:22]  *** Contents of shared directory: ***
[2022-04-09 14:19:22] total 41696
[2022-04-09 14:19:22] -rw-r--r--. 2 root root 37658468 Apr  9 14:08 ATLAS.root_0
[2022-04-09 14:19:22] -rw-r--r--. 2 root root    16589 Apr  9 14:08 start_atlas.sh
[2022-04-09 14:19:22] -rw-r--r--. 2 root root   368174 Apr  9 14:08 input.tar.gz
[2022-04-09 14:19:22] -rw-------. 1 root root  2055388 Apr  9 14:18 HITS.pool.root.1
[2022-04-09 14:19:22] -rw-------. 1 root root  2590720 Apr  9 14:19 result.tar.gz
14:19:23 (9606): run_atlas exited; CPU time 770.244627
14:19:23 (9606): called boinc_finish(0)

</stderr_txt>
]]>


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