Name 6buLDmjDAj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmgrIKDmjhYwqn_0
Workunit 2205166
Created 19 Aug 2022, 5:59:33 UTC
Sent 19 Aug 2022, 6:00:08 UTC
Report deadline 26 Aug 2022, 6:00:08 UTC
Received 19 Aug 2022, 6:08:21 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4636
Run time 7 min 56 sec
CPU time 8 sec
Validate state Valid
Credit 34.08
Device peak FLOPS 30.89 GFLOPS
Application version ATLAS Simulation v1.23 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 63.06 MB
Peak swap size 1.49 GB
Peak disk usage 78.00 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
08:00:15 (715145): wrapper (7.7.26015): starting
08:00:15 (715145): wrapper: running run_atlas (--nthreads 4)
[2022-08-19 08:00:15] Arguments: --nthreads 4
[2022-08-19 08:00:15] Threads: 4
[2022-08-19 08:00:15] Checking for CVMFS
[2022-08-19 08:00:15] Probing /cvmfs/atlas.cern.ch... OK
[2022-08-19 08:00:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-08-19 08:00:15] Running cvmfs_config stat atlas.cern.ch
[2022-08-19 08:00:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-08-19 08:00:15] 2.8.2.0 702443 10 31364 108361 1 25 2982126 4096000 0 130560 0 30602 99.979 746 2902 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://137.138.150.196:3128 1
[2022-08-19 08:00:15] CVMFS is ok
[2022-08-19 08:00:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2022-08-19 08:00:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2022-08-19 08:00:15] Further information can be found at the LHC@home message board.
[2022-08-19 08:00:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-08-19 08:00:15] Checking for apptainer binary...
[2022-08-19 08:00:15] apptainer is not installed, using version from CVMFS
[2022-08-19 08:00:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-08-19 08:00:15] pcoslo6
[2022-08-19 08:00:15] apptainer works
[2022-08-19 08:00:15] Set ATHENA_PROC_NUMBER=4
[2022-08-19 08:00:15] Starting ATLAS job with PandaID=5567499098
[2022-08-19 08:00:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0,/tmp,/var/tmp /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-08-19 08:08:08]  *** The last 200 lines of the pilot log: ***
[2022-08-19 08:08:08] - Log from pilotlog.txt -
[2022-08-19 08:08:08] 2022-08-19 06:07:18,949 | DEBUG    | pilot.user.atlas.jobmetrics      | add_event_number          | file /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/eventLoopHeartBeat.txt does not exist (ski
[2022-08-19 08:08:08] 2022-08-19 06:07:18,949 | DEBUG    | pilot.user.atlas.jobmetrics      | get_job_metrics           | no job metrics (all values are zero)
[2022-08-19 08:08:08] 2022-08-19 06:07:18,950 | INFO     | pilot.control.job                | get_data_structure        | payload/TRF did not report the number of read events
[2022-08-19 08:08:08] 2022-08-19 06:07:18,968 | INFO     | pilot.util.container             | print_executable          | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/memory_monitor_summary.json (trf na
[2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 1.0, 'nthreads': 1.0, 'pss': 0.0, 'rchar': 0.0, 'read_bytes': 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.timing                | timing_report             | . get job = 0 s
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 21 s
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 1 s
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 0 s
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 2 s
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 0 s
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.user.atlas.diagnose        | get_log_extracts          | building log extracts (sent to the server as 'pilotLog')
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | DEBUG    | pilot.user.atlas.diagnose        | get_panda_tracer_log      | PanDA tracer log does not exist: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/pandatracerlog
[2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO     | pilot.util.container             | print_executable          | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/pilotlog.txt
[2022-08-19 08:08:08] [end log extracts]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,008 | WARNING  | pilot.util.https                 | add_error_codes           | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2022-08-19 08:08:08] 2022-08-19 06:07:19,009 | WARNING  | pilot.util.https                 | add_error_codes           | pilotErrorDiags = ["Failed to execute payload:mktemp: failed to create file via template '/tmp/asetu
[2022-08-19 08:08:08] 2022-08-19 06:07:19,009 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5567499098', 'state': 'failed', 'timestamp': '2022-08-19T08:07:18+01:00', 'siteName'
[2022-08-19 08:08:08] 2022-08-19 06:07:19,009 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5567499098', 'state': 'failed', 'timestamp': '2022-08-19T08:07:18+0
[2022-08-19 08:08:08] 2022-08-19 06:07:19,009 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc-client/slots/0/heartbeat.json
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5567499098
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | error 1/2: 1305: Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_X
[2022-08-19 08:08:08] /bin/bash: Sim_tf.py: command not found
[2022-08-19 08:08:08] 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | error 2/2: 1187: Payload metadata does not exist
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | pilot error code: 1187
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | pilot error diag: metadata does not exist: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/meta
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO     | pilot.control.job                | make_job_report           | pilot state: failed 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 127
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | exitmsg: 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 3 s
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | nevents: 0
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | pid: 723067
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | pgrp: 723067
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | corecount: 4
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2657327, 11: 2657327, 7: 2666079, 9: 2666079, 124: 2666051}
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.control.job                | make_job_report           | 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/0:
[2022-08-19 08:08:08] 
[2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc-client/slots/0
[2022-08-19 08:08:08] 2022-08-19 06:07:19,054 | DEBUG    | pilot.control.job                | has_job_completed         | total 40588
[2022-08-19 08:08:08] -rw------- 1 boinc boinc      138 Aug 19 08:00 6buLDmjDAj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmgrIKDmjhYwqn.diag
[2022-08-19 08:08:08] -rw------- 1 boinc boinc   105802 Aug 19 08:07 9157454c-4e4f-4ae9-b4b1-6d5f328d4659_95221.1.job.log
[2022-08-19 08:08:08] -rw------- 1 boinc boinc    10359 Aug 19 08:05 9157454c-4e4f-4ae9-b4b1-6d5f328d4659_95221.1.job.log.tgz
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 08:00 EVNT.04972714._000038.pool.root.1
[2022-08-19 08:08:08] drwxrwx--- 2 boinc boinc     4096 Aug 19 08:05 PanDA_Pilot-5567499098/
[2022-08-19 08:08:08] -rw------- 1 boinc boinc  1782703 Aug 19 08:05 agis_ddmendpoints.agis.ALL.json
[2022-08-19 08:08:08] -rw------- 1 boinc boinc  1016305 Aug 19 08:04 agis_schedconf.cvmfs.json
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc        0 Aug 19 08:00 boinc_lockfile
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     8192 Aug 19 08:07 boinc_mmap_file
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc      528 Aug 19 08:07 boinc_task_state.xml
[2022-08-19 08:08:08] -rw------- 1 boinc boinc     2568 Aug 19 08:07 heartbeat.json
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     6541 Aug 19 08:00 init_data.xml
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc   389585 Aug 19 08:00 input.tar.gz
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc      112 Aug 19 08:00 job.xml
[2022-08-19 08:08:08] -rw------- 1 boinc boinc      895 Aug 19 08:05 memory_monitor_summary.json
[2022-08-19 08:08:08] -rw------- 1 boinc boinc      227 Aug 19 08:05 output.list
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     2648 Aug 19 08:00 pandaJob.out
[2022-08-19 08:08:08] drwx------ 4 boinc boinc     4096 Aug 19 08:05 pilot3/
[2022-08-19 08:08:08] -rw------- 1 boinc boinc   378739 Aug 19 07:59 pilot3.tar.gz
[2022-08-19 08:08:08] -rw------- 1 boinc boinc    86541 Aug 19 08:07 pilotlog.txt
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     4534 Aug 19 07:59 queuedata.json
[2022-08-19 08:08:08] -rwxr-xr-x 1 boinc boinc     7825 Aug 19 08:00 run_atlas*
[2022-08-19 08:08:08] -rwx------ 1 boinc boinc    26743 Aug 19 07:59 runpilot2-wrapper.sh*
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc      407 Aug 19 08:00 runtime_log
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     5599 Aug 19 08:00 runtime_log.err
[2022-08-19 08:08:08] drwxrwx--x 2 boinc boinc     4096 Aug 19 08:00 shared/
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc    16664 Aug 19 08:00 start_atlas.sh
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     2025 Aug 19 08:00 stderr.txt
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc      107 Aug 19 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc       22 Aug 19 08:07 wrapper_checkpoint.txt
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.control.job                | has_job_completed         | job 5567499098 has completed (purged errors)
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2022-08-19 08:08:08] 2022-08-19 06:07:19,056 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098
[2022-08-19 08:08:08] 2022-08-19 06:07:20,061 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [723067]
[2022-08-19 08:08:08] 2022-08-19 06:07:20,062 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 723067
[2022-08-19 08:08:08] 2022-08-19 06:07:20,062 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-08-19 08:08:08] 2022-08-19 06:07:21,067 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2022-08-19 08:08:08] 2022-08-19 06:07:21,068 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=723067
[2022-08-19 08:08:08] 2022-08-19 06:07:21,129 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [723067] (in reverse order)
[2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2022-08-19 08:08:08] 2022-08-19 06:07:21,150 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.3.4 (69)  ***
[2022-08-19 08:08:08] 2022-08-19 06:07:21,150 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2022-08-19 08:08:08] 2022-08-19 06:07:21,150 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2022-08-19 08:08:08] 2022-08-19 06:07:21,167 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2022-08-19 08:08:08] 2022-08-19 06:07:21,203 | INFO     | pilot.util.auxiliary             | display_architecture_info | 
[2022-08-19 08:08:08] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-08-19 08:08:08] Distributor ID:	CentOS
[2022-08-19 08:08:08] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-08-19 08:08:08] Release:	7.9.2009
[2022-08-19 08:08:08] Codename:	Core
[2022-08-19 08:08:08] 2022-08-19 06:07:21,203 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ****************************************
[2022-08-19 08:08:08] 2022-08-19 06:07:21,706 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/0
[2022-08-19 08:08:08] 2022-08-19 06:07:21,707 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc-client/slots/0
[2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2022-08-19 08:08:08] /dev/nvme0n1p2         238777 81876    144701      37% /var/lib/boinc-client/slots/0
[2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (151729995776 B)
[2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | DEBUG    | pilot.control.job                | retrieve                  | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:21,746 | DEBUG    | pilot.control.payload            | execute_payloads          | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:21,746 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:21,821 | DEBUG    | pilot.control.payload            | failed_post               | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:21,822 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:21,922 | DEBUG    | pilot.control.job                | create_data_payload       | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:21,923 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:21,999 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2022-08-19 08:08:08] 2022-08-19 06:07:21,999 | DEBUG    | pilot.control.data               | control                   | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:22,000 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:22,021 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-08-19 08:08:08] 2022-08-19 06:07:22,031 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2022-08-19 08:08:08] 2022-08-19 06:07:22,101 | DEBUG    | pilot.control.job                | validate                  | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:22,101 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:22,141 | DEBUG    | pilot.control.payload            | validate_pre              | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:22,141 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:22,280 | DEBUG    | pilot.control.payload            | validate_post             | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:22,280 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:22,398 | DEBUG    | pilot.control.data               | copytool_in               | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:22,400 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:22,633 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2022-08-19 08:08:08] 2022-08-19 06:07:22,850 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2022-08-19 08:08:08] 2022-08-19 06:07:22,850 | DEBUG    | pilot.control.payload            | control                   | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:22,851 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:22,898 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2022-08-19 08:08:08] 2022-08-19 06:07:22,899 | DEBUG    | pilot.control.job                | control                   | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:22,899 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:23,634 | DEBUG    | pilot.control.data               | copytool_out              | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:23,635 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:24,050 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2022-08-19 08:08:08] 2022-08-19 06:07:24,050 | DEBUG    | pilot.control.job                | queue_monitor             | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:24,050 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:25,022 | DEBUG    | pilot.control.data               | queue_monitoring          | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:25,023 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:07:37,277 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2022-08-19 08:08:08] 2022-08-19 06:07:37,278 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2022-08-19 08:08:08] 2022-08-19 06:07:37,278 | DEBUG    | pilot.control.payload            | run_realtimelog           | will not set job_aborted yet
[2022-08-19 08:08:08] 2022-08-19 06:07:37,278 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:08:07,527 | WARNING  | pilot.control.job                | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s)
[2022-08-19 08:08:08] 2022-08-19 06:08:07,527 | DEBUG    | pilot.util.processes             | threads_aborted           | aborting since the last relevant thread is about to finish
[2022-08-19 08:08:08] 2022-08-19 06:08:07,528 | DEBUG    | pilot.control.job                | job_monitor               | will proceed to set job_aborted
[2022-08-19 08:08:08] 2022-08-19 06:08:07,528 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2022-08-19 08:08:08] 2022-08-19 06:08:08,328 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2022-08-19 08:08:08] 2022-08-19 06:08:08,329 | INFO     | root                             | wrap_up                   | traces error code: 0
[2022-08-19 08:08:08] 2022-08-19 06:08:08,329 | INFO     | root                             | wrap_up                   | pilot has finished
[2022-08-19 08:08:08] 2022-08-19 06:08:08,426 [wrapper] ==== pilot stdout END ====
[2022-08-19 08:08:08] 2022-08-19 06:08:08,429 [wrapper] ==== wrapper stdout RESUME ====
[2022-08-19 08:08:08] 2022-08-19 06:08:08,430 [wrapper] pilotpid: 721299
[2022-08-19 08:08:08] 2022-08-19 06:08:08,432 [wrapper] Pilot exit status: 0
[2022-08-19 08:08:08] 2022-08-19 06:08:08,438 [wrapper] pandaids: 5567499098
[2022-08-19 08:08:08] 2022-08-19 06:08:08,441 [wrapper] apfmon messages muted
[2022-08-19 08:08:08] 2022-08-19 06:08:08,443 [wrapper] Test setup, not cleaning
[2022-08-19 08:08:08] 2022-08-19 06:08:08,445 [wrapper] ==== wrapper stdout END ====
[2022-08-19 08:08:08] 2022-08-19 06:08:08,446 [wrapper] ==== wrapper stderr END ====
[2022-08-19 08:08:08] 2022-08-19 06:08:08,449 [wrapper] wrapperexiting ec=0, duration=473
[2022-08-19 08:08:08] 2022-08-19 06:08:08,451 [wrapper] apfmon messages muted
[2022-08-19 08:08:08]  *** Error codes and diagnostics ***
[2022-08-19 08:08:08]     "exeErrorCode": 0,
[2022-08-19 08:08:08]     "exeErrorDiag": "",
[2022-08-19 08:08:08]     "pilotErrorCode": 1305,
[2022-08-19 08:08:08]     "pilotErrorDiag": "Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: command not found\n",
[2022-08-19 08:08:08]  *** Listing of results directory ***
[2022-08-19 08:08:08] total 40696
[2022-08-19 08:08:08] -rwx------ 1 boinc boinc    26743 Aug 19 07:59 runpilot2-wrapper.sh
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     4534 Aug 19 07:59 queuedata.json
[2022-08-19 08:08:08] -rw------- 1 boinc boinc   378739 Aug 19 07:59 pilot3.tar.gz
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc      107 Aug 19 08:00 wrapper_26015_x86_64-pc-linux-gnu
[2022-08-19 08:08:08] -rwxr-xr-x 1 boinc boinc     7825 Aug 19 08:00 run_atlas
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc      112 Aug 19 08:00 job.xml
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc    16664 Aug 19 08:00 start_atlas.sh
[2022-08-19 08:08:08] drwxrwx--x 2 boinc boinc     4096 Aug 19 08:00 shared
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc   389585 Aug 19 08:00 input.tar.gz
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     6541 Aug 19 08:00 init_data.xml
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 08:00 EVNT.04972714._000038.pool.root.1
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc        0 Aug 19 08:00 boinc_lockfile
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     2648 Aug 19 08:00 pandaJob.out
[2022-08-19 08:08:08] -rw------- 1 boinc boinc  1016305 Aug 19 08:04 agis_schedconf.cvmfs.json
[2022-08-19 08:08:08] -rw------- 1 boinc boinc  1782703 Aug 19 08:05 agis_ddmendpoints.agis.ALL.json
[2022-08-19 08:08:08] drwx------ 4 boinc boinc     4096 Aug 19 08:05 pilot3
[2022-08-19 08:08:08] -rw------- 1 boinc boinc      895 Aug 19 08:05 memory_monitor_summary.json
[2022-08-19 08:08:08] -rw------- 1 boinc boinc    10359 Aug 19 08:05 9157454c-4e4f-4ae9-b4b1-6d5f328d4659_95221.1.job.log.tgz
[2022-08-19 08:08:08] -rw------- 1 boinc boinc     2568 Aug 19 08:07 heartbeat.json
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc      528 Aug 19 08:07 boinc_task_state.xml
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     8192 Aug 19 08:08 boinc_mmap_file
[2022-08-19 08:08:08] -rw------- 1 boinc boinc     8445 Aug 19 08:08 pilotlog.txt
[2022-08-19 08:08:08] -rw------- 1 boinc boinc   122084 Aug 19 08:08 9157454c-4e4f-4ae9-b4b1-6d5f328d4659_95221.1.job.log
[2022-08-19 08:08:08] -rw------- 1 boinc boinc      227 Aug 19 08:08 output.list
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc       22 Aug 19 08:08 wrapper_checkpoint.txt
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc     9026 Aug 19 08:08 runtime_log.err
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc      686 Aug 19 08:08 runtime_log
[2022-08-19 08:08:08] -rw------- 1 boinc boinc   143360 Aug 19 08:08 result.tar.gz
[2022-08-19 08:08:08] -rw------- 1 boinc boinc      550 Aug 19 08:08 6buLDmjDAj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmgrIKDmjhYwqn.diag
[2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc    30907 Aug 19 08:08 stderr.txt
[2022-08-19 08:08:08] No HITS result produced
[2022-08-19 08:08:08]  *** Contents of shared directory: ***
[2022-08-19 08:08:08] total 37288
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc    16664 Aug 19 08:00 start_atlas.sh
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc   389585 Aug 19 08:00 input.tar.gz
[2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 08:00 ATLAS.root_0
[2022-08-19 08:08:08] -rw------- 1 boinc boinc   143360 Aug 19 08:08 result.tar.gz
08:08:10 (715145): run_atlas exited; CPU time 8.836895
08:08:10 (715145): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN