Name | 6buLDmjDAj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmgrIKDmjhYwqn_0 |
Workunit | 2205166 |
Created | 19 Aug 2022, 5:59:33 UTC |
Sent | 19 Aug 2022, 6:00:08 UTC |
Report deadline | 26 Aug 2022, 6:00:08 UTC |
Received | 19 Aug 2022, 6:08:21 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4636 |
Run time | 7 min 56 sec |
CPU time | 8 sec |
Validate state | Valid |
Credit | 34.08 |
Device peak FLOPS | 30.89 GFLOPS |
Application version | ATLAS Simulation v1.23 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 63.06 MB |
Peak swap size | 1.49 GB |
Peak disk usage | 78.00 MB |
<core_client_version>7.18.1</core_client_version> <![CDATA[ <stderr_txt> 08:00:15 (715145): wrapper (7.7.26015): starting 08:00:15 (715145): wrapper: running run_atlas (--nthreads 4) [2022-08-19 08:00:15] Arguments: --nthreads 4 [2022-08-19 08:00:15] Threads: 4 [2022-08-19 08:00:15] Checking for CVMFS [2022-08-19 08:00:15] Probing /cvmfs/atlas.cern.ch... OK [2022-08-19 08:00:15] Probing /cvmfs/atlas-condb.cern.ch... OK [2022-08-19 08:00:15] Running cvmfs_config stat atlas.cern.ch [2022-08-19 08:00:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2022-08-19 08:00:15] 2.8.2.0 702443 10 31364 108361 1 25 2982126 4096000 0 130560 0 30602 99.979 746 2902 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://137.138.150.196:3128 1 [2022-08-19 08:00:15] CVMFS is ok [2022-08-19 08:00:15] Efficiency of ATLAS tasks can be improved by the following measure(s): [2022-08-19 08:00:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2022-08-19 08:00:15] Further information can be found at the LHC@home message board. [2022-08-19 08:00:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2022-08-19 08:00:15] Checking for apptainer binary... [2022-08-19 08:00:15] apptainer is not installed, using version from CVMFS [2022-08-19 08:00:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2022-08-19 08:00:15] pcoslo6 [2022-08-19 08:00:15] apptainer works [2022-08-19 08:00:15] Set ATHENA_PROC_NUMBER=4 [2022-08-19 08:00:15] Starting ATLAS job with PandaID=5567499098 [2022-08-19 08:00:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0,/tmp,/var/tmp /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2022-08-19 08:08:08] *** The last 200 lines of the pilot log: *** [2022-08-19 08:08:08] - Log from pilotlog.txt - [2022-08-19 08:08:08] 2022-08-19 06:07:18,949 | DEBUG | pilot.user.atlas.jobmetrics | add_event_number | file /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/eventLoopHeartBeat.txt does not exist (ski [2022-08-19 08:08:08] 2022-08-19 06:07:18,949 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | no job metrics (all values are zero) [2022-08-19 08:08:08] 2022-08-19 06:07:18,950 | INFO | pilot.control.job | get_data_structure | payload/TRF did not report the number of read events [2022-08-19 08:08:08] 2022-08-19 06:07:18,968 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/memory_monitor_summary.json (trf na [2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 1.0, 'nthreads': 1.0, 'pss': 0.0, 'rchar': 0.0, 'read_bytes': [2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2022-08-19 08:08:08] 2022-08-19 06:07:19,001 | INFO | pilot.util.timing | timing_report | .............................. [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.timing | timing_report | . initial setup = 21 s [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.timing | timing_report | . payload setup = 1 s [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.timing | timing_report | . payload execution = 2 s [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.timing | timing_report | .............................. [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.user.atlas.diagnose | get_log_extracts | building log extracts (sent to the server as 'pilotLog') [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | DEBUG | pilot.user.atlas.diagnose | get_panda_tracer_log | PanDA tracer log does not exist: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/pandatracerlog [2022-08-19 08:08:08] 2022-08-19 06:07:19,002 | INFO | pilot.util.container | print_executable | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/pilotlog.txt [2022-08-19 08:08:08] [end log extracts] [2022-08-19 08:08:08] 2022-08-19 06:07:19,008 | WARNING | pilot.util.https | add_error_codes | pilotErrorCodes = [1305, 1187] (will report primary/first error code) [2022-08-19 08:08:08] 2022-08-19 06:07:19,009 | WARNING | pilot.util.https | add_error_codes | pilotErrorDiags = ["Failed to execute payload:mktemp: failed to create file via template '/tmp/asetu [2022-08-19 08:08:08] 2022-08-19 06:07:19,009 | DEBUG | pilot.control.job | send_state | data={'jobId': '5567499098', 'state': 'failed', 'timestamp': '2022-08-19T08:07:18+01:00', 'siteName' [2022-08-19 08:08:08] 2022-08-19 06:07:19,009 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5567499098', 'state': 'failed', 'timestamp': '2022-08-19T08:07:18+0 [2022-08-19 08:08:08] 2022-08-19 06:07:19,009 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc-client/slots/0/heartbeat.json [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | job summary report [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | PanDA job id: 5567499098 [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | task id: NULL [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | error 1/2: 1305: Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_X [2022-08-19 08:08:08] /bin/bash: Sim_tf.py: command not found [2022-08-19 08:08:08] [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | error 2/2: 1187: Payload metadata does not exist [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | pilot error code: 1187 [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | pilot error diag: metadata does not exist: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098/meta [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2022-08-19 08:08:08] 2022-08-19 06:07:19,041 | INFO | pilot.control.job | make_job_report | pilot state: failed [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | transexitcode: 127 [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | exitmsg: [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 3 s [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | nevents: 0 [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | pid: 723067 [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | pgrp: 723067 [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | corecount: 4 [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | event service: False [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | sizes: {0: 2657327, 11: 2657327, 7: 2666079, 9: 2666079, 124: 2666051} [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.control.job | make_job_report | [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/0: [2022-08-19 08:08:08] [2022-08-19 08:08:08] 2022-08-19 06:07:19,042 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc-client/slots/0 [2022-08-19 08:08:08] 2022-08-19 06:07:19,054 | DEBUG | pilot.control.job | has_job_completed | total 40588 [2022-08-19 08:08:08] -rw------- 1 boinc boinc 138 Aug 19 08:00 6buLDmjDAj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmgrIKDmjhYwqn.diag [2022-08-19 08:08:08] -rw------- 1 boinc boinc 105802 Aug 19 08:07 9157454c-4e4f-4ae9-b4b1-6d5f328d4659_95221.1.job.log [2022-08-19 08:08:08] -rw------- 1 boinc boinc 10359 Aug 19 08:05 9157454c-4e4f-4ae9-b4b1-6d5f328d4659_95221.1.job.log.tgz [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 08:00 EVNT.04972714._000038.pool.root.1 [2022-08-19 08:08:08] drwxrwx--- 2 boinc boinc 4096 Aug 19 08:05 PanDA_Pilot-5567499098/ [2022-08-19 08:08:08] -rw------- 1 boinc boinc 1782703 Aug 19 08:05 agis_ddmendpoints.agis.ALL.json [2022-08-19 08:08:08] -rw------- 1 boinc boinc 1016305 Aug 19 08:04 agis_schedconf.cvmfs.json [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 0 Aug 19 08:00 boinc_lockfile [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 8192 Aug 19 08:07 boinc_mmap_file [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 528 Aug 19 08:07 boinc_task_state.xml [2022-08-19 08:08:08] -rw------- 1 boinc boinc 2568 Aug 19 08:07 heartbeat.json [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 6541 Aug 19 08:00 init_data.xml [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 389585 Aug 19 08:00 input.tar.gz [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 112 Aug 19 08:00 job.xml [2022-08-19 08:08:08] -rw------- 1 boinc boinc 895 Aug 19 08:05 memory_monitor_summary.json [2022-08-19 08:08:08] -rw------- 1 boinc boinc 227 Aug 19 08:05 output.list [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 2648 Aug 19 08:00 pandaJob.out [2022-08-19 08:08:08] drwx------ 4 boinc boinc 4096 Aug 19 08:05 pilot3/ [2022-08-19 08:08:08] -rw------- 1 boinc boinc 378739 Aug 19 07:59 pilot3.tar.gz [2022-08-19 08:08:08] -rw------- 1 boinc boinc 86541 Aug 19 08:07 pilotlog.txt [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 4534 Aug 19 07:59 queuedata.json [2022-08-19 08:08:08] -rwxr-xr-x 1 boinc boinc 7825 Aug 19 08:00 run_atlas* [2022-08-19 08:08:08] -rwx------ 1 boinc boinc 26743 Aug 19 07:59 runpilot2-wrapper.sh* [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 407 Aug 19 08:00 runtime_log [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 5599 Aug 19 08:00 runtime_log.err [2022-08-19 08:08:08] drwxrwx--x 2 boinc boinc 4096 Aug 19 08:00 shared/ [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 16664 Aug 19 08:00 start_atlas.sh [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 2025 Aug 19 08:00 stderr.txt [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 107 Aug 19 08:00 wrapper_26015_x86_64-pc-linux-gnu [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 22 Aug 19 08:07 wrapper_checkpoint.txt [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.control.job | has_job_completed | job 5567499098 has completed (purged errors) [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2022-08-19 08:08:08] 2022-08-19 06:07:19,055 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2022-08-19 08:08:08] 2022-08-19 06:07:19,056 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567499098 [2022-08-19 08:08:08] 2022-08-19 06:07:20,061 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [723067] [2022-08-19 08:08:08] 2022-08-19 06:07:20,062 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 723067 [2022-08-19 08:08:08] 2022-08-19 06:07:20,062 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2022-08-19 08:08:08] 2022-08-19 06:07:21,067 | INFO | pilot.util.processes | cleanup | collected zombie processes [2022-08-19 08:08:08] 2022-08-19 06:07:21,068 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=723067 [2022-08-19 08:08:08] 2022-08-19 06:07:21,129 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [723067] (in reverse order) [2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | INFO | pilot.control.job | retrieve | ready for new job [2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2022-08-19 08:08:08] 2022-08-19 06:07:21,149 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2022-08-19 08:08:08] 2022-08-19 06:07:21,150 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.3.4 (69) *** [2022-08-19 08:08:08] 2022-08-19 06:07:21,150 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2022-08-19 08:08:08] 2022-08-19 06:07:21,150 | INFO | pilot.util.auxiliary | pilot_version_banner | [2022-08-19 08:08:08] 2022-08-19 06:07:21,167 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2022-08-19 08:08:08] 2022-08-19 06:07:21,203 | INFO | pilot.util.auxiliary | display_architecture_info | [2022-08-19 08:08:08] LSB Version: :core-4.1-amd64:core-4.1-noarch [2022-08-19 08:08:08] Distributor ID: CentOS [2022-08-19 08:08:08] Description: CentOS Linux release 7.9.2009 (Core) [2022-08-19 08:08:08] Release: 7.9.2009 [2022-08-19 08:08:08] Codename: Core [2022-08-19 08:08:08] 2022-08-19 06:07:21,203 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2022-08-19 08:08:08] 2022-08-19 06:07:21,706 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/0 [2022-08-19 08:08:08] 2022-08-19 06:07:21,707 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc-client/slots/0 [2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2022-08-19 08:08:08] /dev/nvme0n1p2 238777 81876 144701 37% /var/lib/boinc-client/slots/0 [2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (151729995776 B) [2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:21,734 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:21,746 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:21,746 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:21,821 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:21,822 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:21,922 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:21,923 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:21,999 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2022-08-19 08:08:08] 2022-08-19 06:07:21,999 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:22,000 | INFO | pilot.control.data | control | [data] control thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:22,021 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2022-08-19 08:08:08] 2022-08-19 06:07:22,031 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2022-08-19 08:08:08] 2022-08-19 06:07:22,101 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:22,101 | INFO | pilot.control.job | validate | [job] validate thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:22,141 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:22,141 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:22,280 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:22,280 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:22,398 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:22,400 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:22,633 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2022-08-19 08:08:08] 2022-08-19 06:07:22,850 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2022-08-19 08:08:08] 2022-08-19 06:07:22,850 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:22,851 | INFO | pilot.control.payload | control | [payload] control thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:22,898 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2022-08-19 08:08:08] 2022-08-19 06:07:22,899 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:22,899 | INFO | pilot.control.job | control | [job] control thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:23,634 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:23,635 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:24,050 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2022-08-19 08:08:08] 2022-08-19 06:07:24,050 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:24,050 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:25,022 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:25,023 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2022-08-19 08:08:08] 2022-08-19 06:07:37,277 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2022-08-19 08:08:08] 2022-08-19 06:07:37,278 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2022-08-19 08:08:08] 2022-08-19 06:07:37,278 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2022-08-19 08:08:08] 2022-08-19 06:07:37,278 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2022-08-19 08:08:08] 2022-08-19 06:08:07,527 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) [2022-08-19 08:08:08] 2022-08-19 06:08:07,527 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2022-08-19 08:08:08] 2022-08-19 06:08:07,528 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2022-08-19 08:08:08] 2022-08-19 06:08:07,528 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2022-08-19 08:08:08] 2022-08-19 06:08:08,328 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2022-08-19 08:08:08] 2022-08-19 06:08:08,329 | INFO | root | wrap_up | traces error code: 0 [2022-08-19 08:08:08] 2022-08-19 06:08:08,329 | INFO | root | wrap_up | pilot has finished [2022-08-19 08:08:08] 2022-08-19 06:08:08,426 [wrapper] ==== pilot stdout END ==== [2022-08-19 08:08:08] 2022-08-19 06:08:08,429 [wrapper] ==== wrapper stdout RESUME ==== [2022-08-19 08:08:08] 2022-08-19 06:08:08,430 [wrapper] pilotpid: 721299 [2022-08-19 08:08:08] 2022-08-19 06:08:08,432 [wrapper] Pilot exit status: 0 [2022-08-19 08:08:08] 2022-08-19 06:08:08,438 [wrapper] pandaids: 5567499098 [2022-08-19 08:08:08] 2022-08-19 06:08:08,441 [wrapper] apfmon messages muted [2022-08-19 08:08:08] 2022-08-19 06:08:08,443 [wrapper] Test setup, not cleaning [2022-08-19 08:08:08] 2022-08-19 06:08:08,445 [wrapper] ==== wrapper stdout END ==== [2022-08-19 08:08:08] 2022-08-19 06:08:08,446 [wrapper] ==== wrapper stderr END ==== [2022-08-19 08:08:08] 2022-08-19 06:08:08,449 [wrapper] wrapperexiting ec=0, duration=473 [2022-08-19 08:08:08] 2022-08-19 06:08:08,451 [wrapper] apfmon messages muted [2022-08-19 08:08:08] *** Error codes and diagnostics *** [2022-08-19 08:08:08] "exeErrorCode": 0, [2022-08-19 08:08:08] "exeErrorDiag": "", [2022-08-19 08:08:08] "pilotErrorCode": 1305, [2022-08-19 08:08:08] "pilotErrorDiag": "Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: command not found\n", [2022-08-19 08:08:08] *** Listing of results directory *** [2022-08-19 08:08:08] total 40696 [2022-08-19 08:08:08] -rwx------ 1 boinc boinc 26743 Aug 19 07:59 runpilot2-wrapper.sh [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 4534 Aug 19 07:59 queuedata.json [2022-08-19 08:08:08] -rw------- 1 boinc boinc 378739 Aug 19 07:59 pilot3.tar.gz [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 107 Aug 19 08:00 wrapper_26015_x86_64-pc-linux-gnu [2022-08-19 08:08:08] -rwxr-xr-x 1 boinc boinc 7825 Aug 19 08:00 run_atlas [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 112 Aug 19 08:00 job.xml [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 16664 Aug 19 08:00 start_atlas.sh [2022-08-19 08:08:08] drwxrwx--x 2 boinc boinc 4096 Aug 19 08:00 shared [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 389585 Aug 19 08:00 input.tar.gz [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 6541 Aug 19 08:00 init_data.xml [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 08:00 EVNT.04972714._000038.pool.root.1 [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 0 Aug 19 08:00 boinc_lockfile [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 2648 Aug 19 08:00 pandaJob.out [2022-08-19 08:08:08] -rw------- 1 boinc boinc 1016305 Aug 19 08:04 agis_schedconf.cvmfs.json [2022-08-19 08:08:08] -rw------- 1 boinc boinc 1782703 Aug 19 08:05 agis_ddmendpoints.agis.ALL.json [2022-08-19 08:08:08] drwx------ 4 boinc boinc 4096 Aug 19 08:05 pilot3 [2022-08-19 08:08:08] -rw------- 1 boinc boinc 895 Aug 19 08:05 memory_monitor_summary.json [2022-08-19 08:08:08] -rw------- 1 boinc boinc 10359 Aug 19 08:05 9157454c-4e4f-4ae9-b4b1-6d5f328d4659_95221.1.job.log.tgz [2022-08-19 08:08:08] -rw------- 1 boinc boinc 2568 Aug 19 08:07 heartbeat.json [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 528 Aug 19 08:07 boinc_task_state.xml [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 8192 Aug 19 08:08 boinc_mmap_file [2022-08-19 08:08:08] -rw------- 1 boinc boinc 8445 Aug 19 08:08 pilotlog.txt [2022-08-19 08:08:08] -rw------- 1 boinc boinc 122084 Aug 19 08:08 9157454c-4e4f-4ae9-b4b1-6d5f328d4659_95221.1.job.log [2022-08-19 08:08:08] -rw------- 1 boinc boinc 227 Aug 19 08:08 output.list [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 22 Aug 19 08:08 wrapper_checkpoint.txt [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 9026 Aug 19 08:08 runtime_log.err [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 686 Aug 19 08:08 runtime_log [2022-08-19 08:08:08] -rw------- 1 boinc boinc 143360 Aug 19 08:08 result.tar.gz [2022-08-19 08:08:08] -rw------- 1 boinc boinc 550 Aug 19 08:08 6buLDmjDAj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmgrIKDmjhYwqn.diag [2022-08-19 08:08:08] -rw-r--r-- 1 boinc boinc 30907 Aug 19 08:08 stderr.txt [2022-08-19 08:08:08] No HITS result produced [2022-08-19 08:08:08] *** Contents of shared directory: *** [2022-08-19 08:08:08] total 37288 [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 16664 Aug 19 08:00 start_atlas.sh [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 389585 Aug 19 08:00 input.tar.gz [2022-08-19 08:08:08] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 08:00 ATLAS.root_0 [2022-08-19 08:08:08] -rw------- 1 boinc boinc 143360 Aug 19 08:08 result.tar.gz 08:08:10 (715145): run_atlas exited; CPU time 8.836895 08:08:10 (715145): called boinc_finish(0) </stderr_txt> ]]>
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