Name | a9lMDmUABj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmmrIKDmJ8h4Fo_0 |
Workunit | 2205175 |
Created | 19 Aug 2022, 7:00:25 UTC |
Sent | 19 Aug 2022, 7:08:08 UTC |
Report deadline | 26 Aug 2022, 7:08:08 UTC |
Received | 19 Aug 2022, 7:14:14 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4636 |
Run time | 5 min 47 sec |
CPU time | 2 sec |
Validate state | Valid |
Credit | 24.85 |
Device peak FLOPS | 30.89 GFLOPS |
Application version | ATLAS Simulation v1.23 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 62.20 MB |
Peak swap size | 1.49 GB |
Peak disk usage | 78.01 MB |
<core_client_version>7.18.1</core_client_version> <![CDATA[ <stderr_txt> 09:08:15 (742463): wrapper (7.7.26015): starting 09:08:15 (742463): wrapper: running run_atlas (--nthreads 4) [2022-08-19 09:08:15] Arguments: --nthreads 4 [2022-08-19 09:08:15] Threads: 4 [2022-08-19 09:08:15] Checking for CVMFS [2022-08-19 09:08:16] Probing /cvmfs/atlas.cern.ch... OK [2022-08-19 09:08:16] Probing /cvmfs/atlas-condb.cern.ch... OK [2022-08-19 09:08:16] Running cvmfs_config stat atlas.cern.ch [2022-08-19 09:08:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2022-08-19 09:08:16] 2.8.2.0 742669 0 24812 108364 4 1 2985072 4096000 0 130560 0 0 0.000 664 1294 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://137.138.150.196:3128 1 [2022-08-19 09:08:16] CVMFS is ok [2022-08-19 09:08:16] Efficiency of ATLAS tasks can be improved by the following measure(s): [2022-08-19 09:08:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2022-08-19 09:08:16] Further information can be found at the LHC@home message board. [2022-08-19 09:08:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2022-08-19 09:08:16] Checking for apptainer binary... [2022-08-19 09:08:16] apptainer is not installed, using version from CVMFS [2022-08-19 09:08:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2022-08-19 09:08:16] pcoslo6 [2022-08-19 09:08:16] apptainer works [2022-08-19 09:08:16] Set ATHENA_PROC_NUMBER=4 [2022-08-19 09:08:16] Starting ATLAS job with PandaID=5567544066 [2022-08-19 09:08:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0,/tmp,/var/tmp /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2022-08-19 09:14:00] *** The last 200 lines of the pilot log: *** [2022-08-19 09:14:00] - Log from pilotlog.txt - [2022-08-19 09:14:00] 2022-08-19 07:13:10,777 | WARNING | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[], y=[] (must be same and length>=4) [2022-08-19 09:14:00] 2022-08-19 07:13:10,777 | DEBUG | pilot.user.atlas.jobmetrics | add_event_number | file /var/lib/boinc-client/slots/0/PanDA_Pilot-5567544066/eventLoopHeartBeat.txt does not exist (ski [2022-08-19 09:14:00] 2022-08-19 07:13:10,778 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | no job metrics (all values are zero) [2022-08-19 09:14:00] 2022-08-19 07:13:10,778 | INFO | pilot.control.job | get_data_structure | payload/TRF did not report the number of read events [2022-08-19 09:14:00] 2022-08-19 07:13:10,796 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2022-08-19 09:14:00] 2022-08-19 07:13:10,829 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567544066/memory_monitor_summary.json (trf na [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'HW': {'cpu': {'CPUs': 16, 'CoresPerSocket': 8, 'ModelName': 'Intel(R) Core(TM) [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.control.job | add_memory_info | memory information not available: 'Max' [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | .............................. [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | . initial setup = 20 s [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | . payload setup = 1 s [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | . payload execution = 2 s [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.timing | timing_report | .............................. [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.user.atlas.diagnose | get_log_extracts | building log extracts (sent to the server as 'pilotLog') [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | DEBUG | pilot.user.atlas.diagnose | get_panda_tracer_log | PanDA tracer log does not exist: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567544066/pandatracerlog [2022-08-19 09:14:00] 2022-08-19 07:13:10,830 | INFO | pilot.util.container | print_executable | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-5567544066/pilotlog.txt [2022-08-19 09:14:00] [end log extracts] [2022-08-19 09:14:00] 2022-08-19 07:13:10,836 | WARNING | pilot.util.https | add_error_codes | pilotErrorCodes = [1305, 1187] (will report primary/first error code) [2022-08-19 09:14:00] 2022-08-19 07:13:10,836 | WARNING | pilot.util.https | add_error_codes | pilotErrorDiags = ["Failed to execute payload:mktemp: failed to create file via template '/tmp/asetu [2022-08-19 09:14:00] 2022-08-19 07:13:10,836 | DEBUG | pilot.control.job | send_state | data={'jobId': '5567544066', 'state': 'failed', 'timestamp': '2022-08-19T09:13:10+01:00', 'siteName' [2022-08-19 09:14:00] 2022-08-19 07:13:10,837 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5567544066', 'state': 'failed', 'timestamp': '2022-08-19T09:13:10+0 [2022-08-19 09:14:00] 2022-08-19 07:13:10,837 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc-client/slots/0/heartbeat.json [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | job summary report [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | PanDA job id: 5567544066 [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | task id: NULL [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | error 1/2: 1305: Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_X [2022-08-19 09:14:00] /bin/bash: Sim_tf.py: command not found [2022-08-19 09:14:00] [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | error 2/2: 1187: Payload metadata does not exist [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | pilot error code: 1187 [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | pilot error diag: metadata does not exist: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567544066/meta [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | pilot state: failed [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | transexitcode: 127 [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | exitmsg: [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 3 s [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | nevents: 0 [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | pid: 750322 [2022-08-19 09:14:00] 2022-08-19 07:13:10,868 | INFO | pilot.control.job | make_job_report | pgrp: 750322 [2022-08-19 09:14:00] 2022-08-19 07:13:10,869 | INFO | pilot.control.job | make_job_report | corecount: 4 [2022-08-19 09:14:00] 2022-08-19 07:13:10,869 | INFO | pilot.control.job | make_job_report | event service: False [2022-08-19 09:14:00] 2022-08-19 07:13:10,869 | INFO | pilot.control.job | make_job_report | sizes: {0: 2655286, 1: 2655747, 12: 2655747, 7: 2664499, 8: 2664499, 124: 2664471} [2022-08-19 09:14:00] 2022-08-19 07:13:10,869 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2022-08-19 09:14:00] 2022-08-19 07:13:10,869 | INFO | pilot.control.job | make_job_report | [2022-08-19 09:14:00] 2022-08-19 07:13:10,869 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/0: [2022-08-19 09:14:00] [2022-08-19 09:14:00] 2022-08-19 07:13:10,869 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc-client/slots/0 [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | DEBUG | pilot.control.job | has_job_completed | total 40584 [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 09:08 EVNT.04972714._000038.pool.root.1 [2022-08-19 09:14:00] drwxrwx--- 2 boinc boinc 4096 Aug 19 09:11 PanDA_Pilot-5567544066/ [2022-08-19 09:14:00] -rw------- 1 boinc boinc 138 Aug 19 09:08 a9lMDmUABj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmmrIKDmJ8h4Fo.diag [2022-08-19 09:14:00] -rw------- 1 boinc boinc 1781578 Aug 19 09:10 agis_ddmendpoints.agis.ALL.json [2022-08-19 09:14:00] -rw------- 1 boinc boinc 1016297 Aug 19 09:10 agis_schedconf.cvmfs.json [2022-08-19 09:14:00] -rw------- 1 boinc boinc 103486 Aug 19 09:13 bd3b59c1-1603-46c1-b193-a7746e4403d3_63138.1.job.log [2022-08-19 09:14:00] -rw------- 1 boinc boinc 10174 Aug 19 09:11 bd3b59c1-1603-46c1-b193-a7746e4403d3_63138.1.job.log.tgz [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 0 Aug 19 09:08 boinc_lockfile [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 8192 Aug 19 09:13 boinc_mmap_file [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 528 Aug 19 09:13 boinc_task_state.xml [2022-08-19 09:14:00] -rw------- 1 boinc boinc 2253 Aug 19 09:13 heartbeat.json [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 6541 Aug 19 09:08 init_data.xml [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 389593 Aug 19 09:08 input.tar.gz [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 112 Aug 19 09:08 job.xml [2022-08-19 09:14:00] -rw------- 1 boinc boinc 279 Aug 19 09:11 memory_monitor_summary.json [2022-08-19 09:14:00] -rw------- 1 boinc boinc 227 Aug 19 09:11 output.list [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 2648 Aug 19 09:08 pandaJob.out [2022-08-19 09:14:00] drwx------ 4 boinc boinc 4096 Aug 19 09:10 pilot3/ [2022-08-19 09:14:00] -rw------- 1 boinc boinc 378739 Aug 19 09:00 pilot3.tar.gz [2022-08-19 09:14:00] -rw------- 1 boinc boinc 84480 Aug 19 09:13 pilotlog.txt [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 4534 Aug 19 09:00 queuedata.json [2022-08-19 09:14:00] -rwxr-xr-x 1 boinc boinc 7825 Aug 19 09:08 run_atlas* [2022-08-19 09:14:00] -rwx------ 1 boinc boinc 26743 Aug 19 09:00 runpilot2-wrapper.sh* [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 407 Aug 19 09:08 runtime_log [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 5599 Aug 19 09:08 runtime_log.err [2022-08-19 09:14:00] drwxrwx--x 2 boinc boinc 4096 Aug 19 09:08 shared/ [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 16664 Aug 19 09:08 start_atlas.sh [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 2018 Aug 19 09:08 stderr.txt [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 107 Aug 19 09:08 wrapper_26015_x86_64-pc-linux-gnu [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 22 Aug 19 09:13 wrapper_checkpoint.txt [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,880 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,881 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,881 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2022-08-19 09:14:00] 2022-08-19 07:13:10,881 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,881 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2022-08-19 09:14:00] 2022-08-19 07:13:10,881 | INFO | pilot.control.job | has_job_completed | job 5567544066 has completed (purged errors) [2022-08-19 09:14:00] 2022-08-19 07:13:10,881 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2022-08-19 09:14:00] 2022-08-19 07:13:10,881 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2022-08-19 09:14:00] 2022-08-19 07:13:10,881 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/0/PanDA_Pilot-5567544066 [2022-08-19 09:14:00] 2022-08-19 07:13:11,883 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [750322] [2022-08-19 09:14:00] 2022-08-19 07:13:11,883 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 750322 [2022-08-19 09:14:00] 2022-08-19 07:13:11,891 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2022-08-19 09:14:00] 2022-08-19 07:13:12,895 | INFO | pilot.util.processes | cleanup | collected zombie processes [2022-08-19 09:14:00] 2022-08-19 07:13:12,895 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=750322 [2022-08-19 09:14:00] 2022-08-19 07:13:12,952 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [750322] (in reverse order) [2022-08-19 09:14:00] 2022-08-19 07:13:12,970 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2022-08-19 09:14:00] 2022-08-19 07:13:12,970 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2022-08-19 09:14:00] 2022-08-19 07:13:12,971 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2022-08-19 09:14:00] 2022-08-19 07:13:12,971 | INFO | pilot.control.job | retrieve | ready for new job [2022-08-19 09:14:00] 2022-08-19 07:13:12,971 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2022-08-19 09:14:00] 2022-08-19 07:13:12,971 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2022-08-19 09:14:00] 2022-08-19 07:13:12,971 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.3.4 (69) *** [2022-08-19 09:14:00] 2022-08-19 07:13:12,971 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2022-08-19 09:14:00] 2022-08-19 07:13:12,971 | INFO | pilot.util.auxiliary | pilot_version_banner | [2022-08-19 09:14:00] 2022-08-19 07:13:12,991 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2022-08-19 09:14:00] 2022-08-19 07:13:13,025 | INFO | pilot.util.auxiliary | display_architecture_info | [2022-08-19 09:14:00] LSB Version: :core-4.1-amd64:core-4.1-noarch [2022-08-19 09:14:00] Distributor ID: CentOS [2022-08-19 09:14:00] Description: CentOS Linux release 7.9.2009 (Core) [2022-08-19 09:14:00] Release: 7.9.2009 [2022-08-19 09:14:00] Codename: Core [2022-08-19 09:14:00] 2022-08-19 07:13:13,026 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2022-08-19 09:14:00] 2022-08-19 07:13:13,528 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/0 [2022-08-19 09:14:00] 2022-08-19 07:13:13,528 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc-client/slots/0 [2022-08-19 09:14:00] 2022-08-19 07:13:13,542 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2022-08-19 09:14:00] /dev/nvme0n1p2 238777 81886 144691 37% /var/lib/boinc-client/slots/0 [2022-08-19 09:14:00] 2022-08-19 07:13:13,542 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2022-08-19 09:14:00] 2022-08-19 07:13:13,542 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (151719510016 B) [2022-08-19 09:14:00] 2022-08-19 07:13:13,542 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2022-08-19 09:14:00] 2022-08-19 07:13:13,542 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:13,542 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:13,720 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:13,720 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:13,762 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2022-08-19 09:14:00] 2022-08-19 07:13:13,844 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2022-08-19 09:14:00] 2022-08-19 07:13:13,844 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:13,844 | INFO | pilot.control.data | control | [data] control thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:13,854 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:13,855 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:13,855 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:13,855 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:13,866 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2022-08-19 09:14:00] 2022-08-19 07:13:14,070 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:14,071 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:14,075 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:14,075 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:14,087 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:14,087 | INFO | pilot.control.job | validate | [job] validate thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:14,277 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:14,277 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:14,439 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2022-08-19 09:14:00] 2022-08-19 07:13:14,731 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2022-08-19 09:14:00] 2022-08-19 07:13:14,731 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:14,731 | INFO | pilot.control.payload | control | [payload] control thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:14,832 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2022-08-19 09:14:00] 2022-08-19 07:13:14,832 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:14,833 | INFO | pilot.control.job | control | [job] control thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:15,440 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:15,440 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:15,878 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2022-08-19 09:14:00] 2022-08-19 07:13:15,878 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:15,878 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:16,867 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:16,868 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:29,369 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2022-08-19 09:14:00] 2022-08-19 07:13:29,370 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2022-08-19 09:14:00] 2022-08-19 07:13:29,370 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2022-08-19 09:14:00] 2022-08-19 07:13:29,370 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2022-08-19 09:14:00] 2022-08-19 07:13:59,427 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 62 s) [2022-08-19 09:14:00] 2022-08-19 07:13:59,427 | DEBUG | pilot.util.processes | threads_aborted | aborting since the last relevant thread is about to finish [2022-08-19 09:14:00] 2022-08-19 07:13:59,428 | DEBUG | pilot.control.job | job_monitor | will proceed to set job_aborted [2022-08-19 09:14:00] 2022-08-19 07:13:59,428 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2022-08-19 09:14:00] 2022-08-19 07:14:00,129 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2022-08-19 09:14:00] 2022-08-19 07:14:00,130 | INFO | root | wrap_up | traces error code: 0 [2022-08-19 09:14:00] 2022-08-19 07:14:00,130 | INFO | root | wrap_up | pilot has finished [2022-08-19 09:14:00] 2022-08-19 07:14:00,227 [wrapper] ==== pilot stdout END ==== [2022-08-19 09:14:00] 2022-08-19 07:14:00,231 [wrapper] ==== wrapper stdout RESUME ==== [2022-08-19 09:14:00] 2022-08-19 07:14:00,233 [wrapper] pilotpid: 748772 [2022-08-19 09:14:00] 2022-08-19 07:14:00,235 [wrapper] Pilot exit status: 0 [2022-08-19 09:14:00] 2022-08-19 07:14:00,241 [wrapper] pandaids: 5567544066 [2022-08-19 09:14:00] 2022-08-19 07:14:00,244 [wrapper] apfmon messages muted [2022-08-19 09:14:00] 2022-08-19 07:14:00,246 [wrapper] Test setup, not cleaning [2022-08-19 09:14:00] 2022-08-19 07:14:00,248 [wrapper] ==== wrapper stdout END ==== [2022-08-19 09:14:00] 2022-08-19 07:14:00,249 [wrapper] ==== wrapper stderr END ==== [2022-08-19 09:14:00] 2022-08-19 07:14:00,253 [wrapper] wrapperexiting ec=0, duration=344 [2022-08-19 09:14:00] 2022-08-19 07:14:00,254 [wrapper] apfmon messages muted [2022-08-19 09:14:00] *** Error codes and diagnostics *** [2022-08-19 09:14:00] "exeErrorCode": 0, [2022-08-19 09:14:00] "exeErrorDiag": "", [2022-08-19 09:14:00] "pilotErrorCode": 1305, [2022-08-19 09:14:00] "pilotErrorDiag": "Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: command not found\n", [2022-08-19 09:14:00] *** Listing of results directory *** [2022-08-19 09:14:00] total 40692 [2022-08-19 09:14:00] -rwx------ 1 boinc boinc 26743 Aug 19 09:00 runpilot2-wrapper.sh [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 4534 Aug 19 09:00 queuedata.json [2022-08-19 09:14:00] -rw------- 1 boinc boinc 378739 Aug 19 09:00 pilot3.tar.gz [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 107 Aug 19 09:08 wrapper_26015_x86_64-pc-linux-gnu [2022-08-19 09:14:00] -rwxr-xr-x 1 boinc boinc 7825 Aug 19 09:08 run_atlas [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 112 Aug 19 09:08 job.xml [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 16664 Aug 19 09:08 start_atlas.sh [2022-08-19 09:14:00] drwxrwx--x 2 boinc boinc 4096 Aug 19 09:08 shared [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 389593 Aug 19 09:08 input.tar.gz [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 6541 Aug 19 09:08 init_data.xml [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 09:08 EVNT.04972714._000038.pool.root.1 [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 0 Aug 19 09:08 boinc_lockfile [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 2648 Aug 19 09:08 pandaJob.out [2022-08-19 09:14:00] -rw------- 1 boinc boinc 1016297 Aug 19 09:10 agis_schedconf.cvmfs.json [2022-08-19 09:14:00] -rw------- 1 boinc boinc 1781578 Aug 19 09:10 agis_ddmendpoints.agis.ALL.json [2022-08-19 09:14:00] drwx------ 4 boinc boinc 4096 Aug 19 09:10 pilot3 [2022-08-19 09:14:00] -rw------- 1 boinc boinc 279 Aug 19 09:11 memory_monitor_summary.json [2022-08-19 09:14:00] -rw------- 1 boinc boinc 10174 Aug 19 09:11 bd3b59c1-1603-46c1-b193-a7746e4403d3_63138.1.job.log.tgz [2022-08-19 09:14:00] -rw------- 1 boinc boinc 2253 Aug 19 09:13 heartbeat.json [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 528 Aug 19 09:13 boinc_task_state.xml [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 8192 Aug 19 09:13 boinc_mmap_file [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 22 Aug 19 09:13 wrapper_checkpoint.txt [2022-08-19 09:14:00] -rw------- 1 boinc boinc 8445 Aug 19 09:14 pilotlog.txt [2022-08-19 09:14:00] -rw------- 1 boinc boinc 119768 Aug 19 09:14 bd3b59c1-1603-46c1-b193-a7746e4403d3_63138.1.job.log [2022-08-19 09:14:00] -rw------- 1 boinc boinc 227 Aug 19 09:14 output.list [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 9026 Aug 19 09:14 runtime_log.err [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 686 Aug 19 09:14 runtime_log [2022-08-19 09:14:00] -rw------- 1 boinc boinc 143360 Aug 19 09:14 result.tar.gz [2022-08-19 09:14:00] -rw------- 1 boinc boinc 550 Aug 19 09:14 a9lMDmUABj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmmrIKDmJ8h4Fo.diag [2022-08-19 09:14:00] -rw-r--r-- 1 boinc boinc 30931 Aug 19 09:14 stderr.txt [2022-08-19 09:14:00] No HITS result produced [2022-08-19 09:14:00] *** Contents of shared directory: *** [2022-08-19 09:14:00] total 37284 [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 16664 Aug 19 09:08 start_atlas.sh [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 389593 Aug 19 09:08 input.tar.gz [2022-08-19 09:14:00] -rw-r--r-- 2 boinc boinc 37620382 Aug 19 09:08 ATLAS.root_0 [2022-08-19 09:14:00] -rw------- 1 boinc boinc 143360 Aug 19 09:14 result.tar.gz 09:14:01 (742463): run_atlas exited; CPU time 9.084011 09:14:01 (742463): called boinc_finish(0) </stderr_txt> ]]>
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