Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:37:37 (354346): wrapper (7.7.26015): starting
12:37:37 (354346): wrapper: running run_atlas (--nthreads 1)
[2022-08-19 12:37:37] Arguments: --nthreads 1
[2022-08-19 12:37:37] Threads: 1
[2022-08-19 12:37:37] Checking for CVMFS
[2022-08-19 12:37:38] Probing /cvmfs/atlas.cern.ch... OK
[2022-08-19 12:37:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-08-19 12:37:38] Running cvmfs_config stat atlas.cern.ch
[2022-08-19 12:37:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-08-19 12:37:38] 2.9.4.0 3710 4127 67556 108372 0 78 3497884 4096000 2261 130560 0 11758466 99.615 3682526 1874 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.241.124.14:3128 1
[2022-08-19 12:37:38] CVMFS is ok
[2022-08-19 12:37:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-08-19 12:37:38] Checking for apptainer binary...
[2022-08-19 12:37:38] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2022-08-19 12:37:38] apptainer is not installed, using version from CVMFS
[2022-08-19 12:37:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-08-19 12:37:39] RYZEN9COS8
[2022-08-19 12:37:39] apptainer works
[2022-08-19 12:38:29] Starting ATLAS job with PandaID=5515971838
[2022-08-19 12:38:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9,/tmp,/var/tmp /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-08-19 12:50:41]  *** The last 200 lines of the pilot log: ***
[2022-08-19 12:50:41] 2022-08-19 10:50:20,954 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2022-08-19 12:50:41]  activity=['pw', 'w', 'default']
[2022-08-19 12:50:41]  allow_lan=True
[2022-08-19 12:50:41]  allow_wan=False
[2022-08-19 12:50:41]  checksum={'adler32': '3e6934ad'}
[2022-08-19 12:50:41]  dataset=hc_test.gangarbt.hc20247452.tid1184.BOINC-TEST.23
[2022-08-19 12:50:41]  ddm_activity=['write_lan', 'write_wan']
[2022-08-19 12:50:41]  ddmendpoint=NDGF-T1_DATADISK
[2022-08-19 12:50:41]  direct_access_lan=False
[2022-08-19 12:50:41]  direct_access_wan=False
[2022-08-19 12:50:41]  domain=
[2022-08-19 12:50:41]  filesize=1276064
[2022-08-19 12:50:41]  filetype=output
[2022-08-19 12:50:41]  guid=DF2D186C-F9B4-EC4E-AA10-8868CD4F48C0
[2022-08-19 12:50:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-08-19 12:50:41]  is_tar=False
[2022-08-19 12:50:41]  lfn=output.1.8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.pool.root
[2022-08-19 12:50:41]  mtime=0
[2022-08-19 12:50:41]  protocol_id=None
[2022-08-19 12:50:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-08-19 12:50:41]  replicas=None
[2022-08-19 12:50:41]  scope=hc_test
[2022-08-19 12:50:41]  status=None
[2022-08-19 12:50:41]  status_code=0
[2022-08-19 12:50:41]  storage_token=
[2022-08-19 12:50:41]  surl=/var/lib/boinc/slots/9/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.pool.root
[2022-08-19 12:50:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/76/80/output.1.8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.pool.root
[2022-08-19 12:50:41]  workdir=None
[2022-08-19 12:50:41] ]
[2022-08-19 12:50:41] 2022-08-19 10:50:20,999 | INFO     | transferring file output.1.8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.pool.root from /var/lib/boinc/slots/9/PanDA_Pilot-5515971838/output.1.8a6e718d-c92
[2022-08-19 12:50:41] 2022-08-19 10:50:20,999 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/9/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.pool.root /var/lib/
[2022-08-19 12:50:41] 2022-08-19 10:50:21,040 | INFO     | Adding to output.list: output.1.8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.pool.root davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/76/8
[2022-08-19 12:50:41] 2022-08-19 10:50:21,040 | INFO     | executing command: ps aux -q 364791
[2022-08-19 12:50:41] 2022-08-19 10:50:21,093 | INFO     | summary of transferred files:
[2022-08-19 12:50:41] 2022-08-19 10:50:21,093 | INFO     |  -- lfn=output.1.8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.pool.root, status_code=0, status=transferred
[2022-08-19 12:50:41] 2022-08-19 10:50:21,093 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9/PanDA_Pilot-5515971838
[2022-08-19 12:50:41] 2022-08-19 10:50:21,150 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9/PanDA_Pilot-5515971838
[2022-08-19 12:50:41] 2022-08-19 10:50:21,215 | INFO     | will create archive /var/lib/boinc/slots/9/8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz
[2022-08-19 12:50:41] 2022-08-19 10:50:21,215 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc/slots/9/8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz tarball_PandaJob_5515971838_BOINC-TEST -
[2022-08-19 12:50:41] 2022-08-19 10:50:21,310 | INFO     | copied /var/lib/boinc/slots/9/8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz to /var/lib/boinc/slots/9/PanDA_Pilot-5515971838
[2022-08-19 12:50:41] 2022-08-19 10:50:21,310 | INFO     | prepare to stage-out 1 log file(s)
[2022-08-19 12:50:41] 2022-08-19 10:50:21,310 | INFO     | stage-out will not be done in a container
[2022-08-19 12:50:41] 2022-08-19 10:50:21,318 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2022-08-19 12:50:41] 2022-08-19 10:50:21,319 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2022-08-19 12:50:41] 2022-08-19 10:50:21,319 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2022-08-19 12:50:41] 2022-08-19 10:50:21,319 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2022-08-19 12:50:41] 2022-08-19 10:50:21,417 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2022-08-19 12:50:41] 2022-08-19 10:50:21,417 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2022-08-19 12:50:41]  activity=['pl', 'pw', 'w', 'default']
[2022-08-19 12:50:41]  allow_lan=True
[2022-08-19 12:50:41]  allow_wan=False
[2022-08-19 12:50:41]  checksum={'adler32': 'd9506fda'}
[2022-08-19 12:50:41]  dataset=hc_test.gangarbt.hc20247452.tid1184.BOINC-TEST.23
[2022-08-19 12:50:41]  ddm_activity=['write_lan', 'write_wan']
[2022-08-19 12:50:41]  ddmendpoint=NDGF-T1_DATADISK
[2022-08-19 12:50:41]  direct_access_lan=False
[2022-08-19 12:50:41]  direct_access_wan=False
[2022-08-19 12:50:41]  domain=
[2022-08-19 12:50:41]  filesize=158102
[2022-08-19 12:50:41]  filetype=log
[2022-08-19 12:50:41]  guid=e5faf5be-08d3-42e1-a1bb-2b7a1e3c51c3
[2022-08-19 12:50:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-08-19 12:50:41]  is_tar=False
[2022-08-19 12:50:41]  lfn=8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz
[2022-08-19 12:50:41]  mtime=0
[2022-08-19 12:50:41]  protocol_id=None
[2022-08-19 12:50:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-08-19 12:50:41]  replicas=None
[2022-08-19 12:50:41]  scope=hc_test
[2022-08-19 12:50:41]  status=None
[2022-08-19 12:50:41]  status_code=0
[2022-08-19 12:50:41]  storage_token=
[2022-08-19 12:50:41]  surl=/var/lib/boinc/slots/9/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz
[2022-08-19 12:50:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c5/12/8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz
[2022-08-19 12:50:41]  workdir=None
[2022-08-19 12:50:41] ]
[2022-08-19 12:50:41] 2022-08-19 10:50:21,455 | INFO     | transferring file 8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz from /var/lib/boinc/slots/9/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-00
[2022-08-19 12:50:41] 2022-08-19 10:50:21,456 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/9/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz /var/lib/boinc
[2022-08-19 12:50:41] 2022-08-19 10:50:21,494 | INFO     | Adding to output.list: 8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c5/12/8a6
[2022-08-19 12:50:41] 2022-08-19 10:50:21,495 | INFO     | executing command: ps aux -q 364791
[2022-08-19 12:50:41] 2022-08-19 10:50:21,551 | INFO     | summary of transferred files:
[2022-08-19 12:50:41] 2022-08-19 10:50:21,551 | INFO     |  -- lfn=8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz, status_code=0, status=transferred
[2022-08-19 12:50:41] 2022-08-19 10:50:21,551 | INFO     | stage-out finished correctly
[2022-08-19 12:50:41] 2022-08-19 10:50:23,946 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2022-08-19 12:50:41] 2022-08-19 10:50:25,999 | INFO     | job 5515971838 has state=finished
[2022-08-19 12:50:41] 2022-08-19 10:50:25,999 | INFO     | preparing for final server update for job 5515971838 in state='finished'
[2022-08-19 12:50:41] 2022-08-19 10:50:25,999 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2022-08-19 12:50:41] 2022-08-19 10:50:25,999 | INFO     | job 5515971838 has finished - writing final server update
[2022-08-19 12:50:41] 2022-08-19 10:50:25,999 | INFO     | will not add max space = -37039658 B to job metrics
[2022-08-19 12:50:41] 2022-08-19 10:50:26,000 | WARNING  | wrong length of table data, x=[1660905945.0, 1660906006.0, 1660906067.0], y=[1068643.0, 1268653.0, 1529310.0] (must be same and length>=4)
[2022-08-19 12:50:41] 2022-08-19 10:50:26,000 | INFO     | total number of processed events: 2 (read)
[2022-08-19 12:50:41] 2022-08-19 10:50:26,001 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-08-19 12:50:41] 2022-08-19 10:50:26,054 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | extracted standard info from prmon json
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | extracted standard memory fields from prmon json
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | ..............................
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | . Timing measurements:
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | . get job = 0 s
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | . initial setup = 2 s
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | . payload setup = 43 s
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | . total setup = 45 s
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | . stage-in = 0 s
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | . payload execution = 616 s
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | . stage-out = 0 s
[2022-08-19 12:50:41] 2022-08-19 10:50:26,055 | INFO     | ..............................
[2022-08-19 12:50:41] 2022-08-19 10:50:26,124 | INFO     | 
[2022-08-19 12:50:41] 2022-08-19 10:50:26,124 | INFO     | job summary report
[2022-08-19 12:50:41] 2022-08-19 10:50:26,124 | INFO     | --------------------------------------------------
[2022-08-19 12:50:41] 2022-08-19 10:50:26,124 | INFO     | PanDA job id: 5515971838
[2022-08-19 12:50:41] 2022-08-19 10:50:26,124 | INFO     | task id: NULL
[2022-08-19 12:50:41] 2022-08-19 10:50:26,125 | INFO     | errors: (none)
[2022-08-19 12:50:41] 2022-08-19 10:50:26,125 | INFO     | status: LOG_TRANSFER = DONE 
[2022-08-19 12:50:41] 2022-08-19 10:50:26,125 | INFO     | pilot state: finished 
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | transexitcode: 0
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | exeerrorcode: 0
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | exeerrordiag: 
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | exitcode: 0
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | exitmsg: OK
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | cpuconsumptiontime: 382 s
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | nevents: 2
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | neventsw: 0
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | pid: 372796
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | pgrp: 372796
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | corecount: 1
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | event service: False
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | sizes: {0: 2656792, 1: 2657061, 11: 2657089, 664: 2678163, 665: 2687233, 668: 2687289, 670: 2688319}
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | --------------------------------------------------
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | 
[2022-08-19 12:50:41] 2022-08-19 10:50:26,126 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2022-08-19 12:50:41] 2022-08-19 10:50:26,209 | INFO     | queue jobs had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,209 | INFO     | queue payloads had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,209 | INFO     | queue data_in had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,209 | INFO     | queue data_out had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue completed_jobids has 1 job(s)
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | job 5515971838 has completed (purged errors)
[2022-08-19 12:50:41] 2022-08-19 10:50:26,210 | INFO     | overall cleanup function is called
[2022-08-19 12:50:41] 2022-08-19 10:50:27,217 | INFO     | --- collectZombieJob: --- 10, [372796]
[2022-08-19 12:50:41] 2022-08-19 10:50:27,218 | INFO     | zombie collector trying to kill pid 372796
[2022-08-19 12:50:41] 2022-08-19 10:50:27,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-08-19 12:50:41] 2022-08-19 10:50:28,221 | INFO     | collected zombie processes
[2022-08-19 12:50:41] 2022-08-19 10:50:28,222 | INFO     | will now attempt to kill all subprocesses of pid=372796
[2022-08-19 12:50:41] 2022-08-19 10:50:28,353 | INFO     | process IDs to be killed: [372796] (in reverse order)
[2022-08-19 12:50:41] 2022-08-19 10:50:28,453 | WARNING  | found no corresponding commands to process id(s)
[2022-08-19 12:50:41] 2022-08-19 10:50:28,453 | INFO     | Do not look for orphan processes in BOINC jobs
[2022-08-19 12:50:41] 2022-08-19 10:50:28,453 | INFO     | ready for new job
[2022-08-19 12:50:41] 2022-08-19 10:50:28,453 | INFO     | pilot has finished for previous job - re-establishing logging
[2022-08-19 12:50:41] 2022-08-19 10:50:28,454 | INFO     | ***************************************
[2022-08-19 12:50:41] 2022-08-19 10:50:28,454 | INFO     | ***  PanDA Pilot version 3.3.3 (1)  ***
[2022-08-19 12:50:41] 2022-08-19 10:50:28,454 | INFO     | ***************************************
[2022-08-19 12:50:41] 2022-08-19 10:50:28,454 | INFO     | 
[2022-08-19 12:50:41] 2022-08-19 10:50:28,454 | INFO     | pilot is running in a VM
[2022-08-19 12:50:41] 2022-08-19 10:50:28,454 | INFO     | architecture information:
[2022-08-19 12:50:41] 2022-08-19 10:50:28,732 | INFO     | 
[2022-08-19 12:50:41] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-08-19 12:50:41] Distributor ID:	CentOS
[2022-08-19 12:50:41] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-08-19 12:50:41] Release:	7.9.2009
[2022-08-19 12:50:41] Codename:	Core
[2022-08-19 12:50:41] 2022-08-19 10:50:28,733 | INFO     | ***************************************
[2022-08-19 12:50:41] 2022-08-19 10:50:29,234 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2022-08-19 12:50:41] 2022-08-19 10:50:29,267 | INFO     | sufficient remaining disk space (25057820672 B)
[2022-08-19 12:50:41] 2022-08-19 10:50:29,267 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2022-08-19 12:50:41] 2022-08-19 10:50:29,267 | WARNING  | aborting monitor loop since graceful_stop has been set
[2022-08-19 12:50:41] 2022-08-19 10:50:29,267 | INFO     | [monitor] control thread has ended
[2022-08-19 12:50:41] 2022-08-19 10:50:29,282 | INFO     | [payload] execute_payloads thread has finished
[2022-08-19 12:50:41] 2022-08-19 10:50:29,507 | INFO     | [payload] validate_pre thread has finished
[2022-08-19 12:50:41] 2022-08-19 10:50:29,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2022-08-19 12:50:41] 2022-08-19 10:50:29,932 | INFO     | [payload] failed_post thread has finished
[2022-08-19 12:50:41] 2022-08-19 10:50:29,961 | INFO     | [payload] validate_post thread has finished
[2022-08-19 12:50:41] 2022-08-19 10:50:30,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-08-19 12:50:41] 2022-08-19 10:50:31,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2022-08-19 12:50:41] 2022-08-19 10:50:39,936 | INFO     | [payload] run_realtimelog thread has finished
[2022-08-19 12:50:41] 2022-08-19 10:50:40,915 | INFO     | end of generic workflow (traces error code: 0)
[2022-08-19 12:50:41] 2022-08-19 10:50:40,915 | INFO     | traces error code: 0
[2022-08-19 12:50:41] 2022-08-19 10:50:40,915 | INFO     | pilot has finished
[2022-08-19 12:50:41] 2022-08-19 10:50:40,998 [wrapper] ==== pilot stdout END ====
[2022-08-19 12:50:41] 2022-08-19 10:50:41,021 [wrapper] ==== wrapper stdout RESUME ====
[2022-08-19 12:50:41] 2022-08-19 10:50:41,031 [wrapper] pilotpid: 364791
[2022-08-19 12:50:41] 2022-08-19 10:50:41,044 [wrapper] Pilot exit status: 0
[2022-08-19 12:50:41] 2022-08-19 10:50:41,099 [wrapper] pandaids: 5515971838
[2022-08-19 12:50:41] 2022-08-19 10:50:41,127 [wrapper] apfmon messages muted
[2022-08-19 12:50:41] 2022-08-19 10:50:41,140 [wrapper] Test setup, not cleaning
[2022-08-19 12:50:41] 2022-08-19 10:50:41,154 [wrapper] ==== wrapper stdout END ====
[2022-08-19 12:50:41] 2022-08-19 10:50:41,181 [wrapper] ==== wrapper stderr END ====
[2022-08-19 12:50:41] 2022-08-19 10:50:41,200 [wrapper] wrapperexiting ec=0, duration=731
[2022-08-19 12:50:41] 2022-08-19 10:50:41,207 [wrapper] apfmon messages muted
[2022-08-19 12:50:41]  *** Error codes and diagnostics ***
[2022-08-19 12:50:41]     "exeErrorCode": 0,
[2022-08-19 12:50:41]     "exeErrorDiag": "",
[2022-08-19 12:50:41]     "pilotErrorCode": 0,
[2022-08-19 12:50:41]     "pilotErrorDiag": "",
[2022-08-19 12:50:41]  *** Listing of results directory ***
[2022-08-19 12:50:41] insgesamt 43676
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc   358966 19. Aug 10:24 pilot3.tar.gz
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc     4534 19. Aug 11:08 queuedata.json
[2022-08-19 12:50:41] -rwx------. 1 boinc boinc    27162 19. Aug 11:09 runpilot2-wrapper.sh
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc      107 19. Aug 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2022-08-19 12:50:41] -rwxr-xr-x. 1 boinc boinc     7825 19. Aug 12:37 run_atlas
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc      112 19. Aug 12:37 job.xml
[2022-08-19 12:50:41] -rw-r--r--. 2 boinc boinc    16679 19. Aug 12:37 start_atlas.sh
[2022-08-19 12:50:41] drwxrwx--x. 2 boinc boinc       68 19. Aug 12:37 shared
[2022-08-19 12:50:41] -rw-r--r--. 2 boinc boinc   369749 19. Aug 12:37 input.tar.gz
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc     6196 19. Aug 12:37 init_data.xml
[2022-08-19 12:50:41] -rw-r--r--. 2 boinc boinc 37960264 19. Aug 12:37 EVNT.04972714._000040.pool.root.1
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc        0 19. Aug 12:37 boinc_lockfile
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc     2797 19. Aug 12:38 pandaJob.out
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc      463 19. Aug 12:38 setup.sh.local
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc  1015256 19. Aug 12:39 agis_schedconf.cvmfs.json
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc  1782667 19. Aug 12:39 agis_ddmendpoints.agis.ALL.json
[2022-08-19 12:50:41] drwx------. 4 boinc boinc      260 19. Aug 12:39 pilot3
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc  1276064 19. Aug 12:50 output.1.8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.pool.root
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc     8192 19. Aug 12:50 boinc_mmap_file
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc       24 19. Aug 12:50 wrapper_checkpoint.txt
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc      532 19. Aug 12:50 boinc_task_state.xml
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc     1014 19. Aug 12:50 memory_monitor_summary.json
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc   158102 19. Aug 12:50 8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log.tgz
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc     7354 19. Aug 12:50 heartbeat.json
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc     2029 19. Aug 12:50 pilotlog.txt
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc    81491 19. Aug 12:50 8a6e718d-c92a-4ece-9644-000649789792-1660900153_98767.1.job.log
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc      508 19. Aug 12:50 output.list
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc      792 19. Aug 12:50 runtime_log
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc  1536000 19. Aug 12:50 result.tar.gz
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc    10979 19. Aug 12:50 runtime_log.err
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc      561 19. Aug 12:50 7qSMDmKBDj1n7Olcko1bjSoqABFKDmABFKDmKFbSDmFuIKDm55DNqm.diag
[2022-08-19 12:50:41] -rw-r--r--. 1 boinc boinc    20729 19. Aug 12:50 stderr.txt
[2022-08-19 12:50:41] HITS file was successfully produced:
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc 1276064 19. Aug 12:50 shared/HITS.pool.root.1
[2022-08-19 12:50:41]  *** Contents of shared directory: ***
[2022-08-19 12:50:41] insgesamt 40204
[2022-08-19 12:50:41] -rw-r--r--. 2 boinc boinc    16679 19. Aug 12:37 start_atlas.sh
[2022-08-19 12:50:41] -rw-r--r--. 2 boinc boinc   369749 19. Aug 12:37 input.tar.gz
[2022-08-19 12:50:41] -rw-r--r--. 2 boinc boinc 37960264 19. Aug 12:37 ATLAS.root_0
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc  1276064 19. Aug 12:50 HITS.pool.root.1
[2022-08-19 12:50:41] -rw-------. 1 boinc boinc  1536000 19. Aug 12:50 result.tar.gz
12:50:43 (354346): run_atlas exited; CPU time 276.000225
12:50:43 (354346): called boinc_finish(0)

</stderr_txt>
]]>

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