| Name | 0jPMDmKKLk1n7Olcko1bjSoqABFKDmABFKDmKFbSDm4xIKDmViKsym_0 |
| Workunit | 2205561 |
| Created | 22 Aug 2022, 12:03:15 UTC |
| Sent | 22 Aug 2022, 12:12:22 UTC |
| Report deadline | 29 Aug 2022, 12:12:22 UTC |
| Received | 22 Aug 2022, 12:37:44 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4636 |
| Run time | 6 min 47 sec |
| CPU time | 8 sec |
| Validate state | Valid |
| Credit | 29.12 |
| Device peak FLOPS | 30.89 GFLOPS |
| Application version | ATLAS Simulation v1.24 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 62.37 MB |
| Peak swap size | 1.42 GB |
| Peak disk usage | 78.44 MB |
Stderr output
<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
14:17:08 (2519307): wrapper (7.7.26015): starting
14:17:08 (2519307): wrapper: running run_atlas (--nthreads 4)
[2022-08-22 14:17:08] Arguments: --nthreads 4
[2022-08-22 14:17:08] Threads: 4
[2022-08-22 14:17:08] Checking for CVMFS
[2022-08-22 14:17:09] Probing /cvmfs/atlas.cern.ch... OK
[2022-08-22 14:17:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-08-22 14:17:09] Running cvmfs_config stat atlas.cern.ch
[2022-08-22 14:17:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-08-22 14:17:09] 2.8.2.0 2497526 4 31680 108507 3 25 3123584 4096001 37 130560 0 63025 99.980 973 3069 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://137.138.63.73:3128 1
[2022-08-22 14:17:09] CVMFS is ok
[2022-08-22 14:17:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2022-08-22 14:17:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2022-08-22 14:17:09] Further information can be found at the LHC@home message board.
[2022-08-22 14:17:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-08-22 14:17:09] Checking for apptainer binary...
[2022-08-22 14:17:09] Using apptainer found in PATH at /usr/bin/apptainer
[2022-08-22 14:17:09] Running /usr/bin/apptainer --version
[2022-08-22 14:17:09] apptainer version 1.1.0-rc.2
[2022-08-22 14:17:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-08-22 14:17:09] pcoslo6
[2022-08-22 14:17:09] apptainer works
[2022-08-22 14:17:09] Set ATHENA_PROC_NUMBER=4
[2022-08-22 14:17:09] Starting ATLAS job with PandaID=5515971838
[2022-08-22 14:17:09] Try creating a directory in /tmp
[2022-08-22 14:17:09] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX
[2022-08-22 14:17:09] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system
[2022-08-22 14:17:09] mktemp /tmp failed
[2022-08-22 14:17:09] Try creating a directory in /var/tmp
[2022-08-22 14:17:09] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX
[2022-08-22 14:17:09] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system
[2022-08-22 14:17:09] mktemp /var/tmp failed
[2022-08-22 14:17:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-08-22 14:23:51] *** The last 200 lines of the pilot log: ***
[2022-08-22 14:23:51] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-08-22 14:23:51] is_tar=False
[2022-08-22 14:23:51] lfn=8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log.tgz
[2022-08-22 14:23:51] mtime=0
[2022-08-22 14:23:51] protocol_id=None
[2022-08-22 14:23:51] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-08-22 14:23:51] replicas=None
[2022-08-22 14:23:51] scope=hc_test
[2022-08-22 14:23:51] status=None
[2022-08-22 14:23:51] status_code=0
[2022-08-22 14:23:51] storage_token=
[2022-08-22 14:23:51] surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log.tgz
[2022-08-22 14:23:51] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/07/68/8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log.tgz
[2022-08-22 14:23:51] workdir=None
[2022-08-22 14:23:51] ]
[2022-08-22 14:23:51] 2022-08-22 12:21:04,255 | INFO | transferring file 8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece
[2022-08-22 14:23:51] 2022-08-22 12:21:04,255 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log.tgz /var/l
[2022-08-22 14:23:51] 2022-08-22 12:21:04,267 | INFO | Adding to output.list: 8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/07/68/8a
[2022-08-22 14:23:51] 2022-08-22 12:21:04,268 | INFO | executing command: ps aux -q 2528152
[2022-08-22 14:23:51] 2022-08-22 12:21:04,278 | INFO | summary of transferred files:
[2022-08-22 14:23:51] 2022-08-22 12:21:04,278 | INFO | -- lfn=8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log.tgz, status_code=0, status=transferred
[2022-08-22 14:23:51] 2022-08-22 12:21:04,278 | INFO | stage-out finished correctly
[2022-08-22 14:23:51] 2022-08-22 12:21:04,309 | INFO | finished stage-out (of log) for failed payload
[2022-08-22 14:23:51] 2022-08-22 12:21:05,003 | INFO | job 5515971838 has state=failed
[2022-08-22 14:23:51] 2022-08-22 12:21:05,004 | INFO | preparing for final server update for job 5515971838 in state='failed'
[2022-08-22 14:23:51] 2022-08-22 12:21:47,165 | INFO | 142.4786775112152s have passed since pilot start
[2022-08-22 14:23:51] 2022-08-22 12:21:48,283 | INFO | monitor loop #1: job 0:5515971838 is in state 'failed'
[2022-08-22 14:23:51] 2022-08-22 12:21:48,283 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2022-08-22 14:23:51] 2022-08-22 12:22:49,883 | INFO | monitor loop #2: job 0:5515971838 is in state 'failed'
[2022-08-22 14:23:51] 2022-08-22 12:22:49,883 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2022-08-22 14:23:51] 2022-08-22 12:23:00,473 | INFO | proceeding with final server update
[2022-08-22 14:23:51] 2022-08-22 12:23:00,474 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2022-08-22 14:23:51] 2022-08-22 12:23:00,475 | INFO | job 5515971838 has failed - writing final server update
[2022-08-22 14:23:51] 2022-08-22 12:23:00,475 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2022-08-22 14:23:51] 2022-08-22 12:23:00,475 | WARNING | found no stored workdir sizes
[2022-08-22 14:23:51] 2022-08-22 12:23:00,476 | INFO | will not add max space = 0 B to job metrics
[2022-08-22 14:23:51] 2022-08-22 12:23:00,476 | INFO | payload/TRF did not report the number of read events
[2022-08-22 14:23:51] 2022-08-22 12:23:00,500 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | neither /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/memory_monitor_summary.json, nor /var/lib/boinc-client/slots/1/memory_monitor_summary.json exist
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | WARNING | file does not exist either: /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/memory_monitor_output.txt
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | memory summary dictionary not yet available
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | ..............................
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . Timing measurements:
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . get job = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . initial setup = 20 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . payload setup = 1 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . total setup = 21 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . stage-in = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . payload execution = 2 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . stage-out = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | ..............................
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | building log extracts (sent to the server as 'pilotLog')
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/pilotlog.txt
[2022-08-22 14:23:51] 2022-08-22 12:23:00,546 | WARNING | detected the following tail of warning/fatal messages in the pilot log:
[2022-08-22 14:23:51] - Log from pilotlog.txt -
[2022-08-22 14:23:51] 2022-08-22 12:23:00,475 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2022-08-22 14:23:51] 2022-08-22 12:23:00,475 | WARNING | found no stored workdir sizes
[2022-08-22 14:23:51] 2022-08-22 12:23:00,476 | INFO | will not add max space = 0 B to job metrics
[2022-08-22 14:23:51] 2022-08-22 12:23:00,476 | INFO | payload/TRF did not report the number of read events
[2022-08-22 14:23:51] 2022-08-22 12:23:00,500 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | neither /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/memory_monitor_summary.json, nor /var/lib/boinc-client/slots/1/memory_monitor_summary.json exist
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | WARNING | file does not exist either: /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/memory_monitor_output.txt
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | memory summary dictionary not yet available
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | ..............................
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . Timing measurements:
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . get job = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . initial setup = 20 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . payload setup = 1 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . total setup = 21 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . stage-in = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . payload execution = 2 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . stage-out = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | ..............................
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | building log extracts (sent to the server as 'pilotLog')
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/pilotlog.txt
[2022-08-22 14:23:51] 2022-08-22 12:23:00,546 | WARNING |
[2022-08-22 14:23:51] [begin log extracts]
[2022-08-22 14:23:51] - Log from pilotlog.txt -
[2022-08-22 14:23:51] 2022-08-22 12:23:00,475 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2022-08-22 14:23:51] 2022-08-22 12:23:00,475 | WARNING | found no stored workdir sizes
[2022-08-22 14:23:51] 2022-08-22 12:23:00,476 | INFO | will not add max space = 0 B to job metrics
[2022-08-22 14:23:51] 2022-08-22 12:23:00,476 | INFO | payload/TRF did not report the number of read events
[2022-08-22 14:23:51] 2022-08-22 12:23:00,500 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | neither /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/memory_monitor_summary.json, nor /var/lib/boinc-client/slots/1/memory_monitor_summary.json exist
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | WARNING | file does not exist either: /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/memory_monitor_output.txt
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | memory summary dictionary not yet available
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | ..............................
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . Timing measurements:
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . get job = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . initial setup = 20 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . payload setup = 1 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . total setup = 21 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . stage-in = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . payload execution = 2 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | . stage-out = 0 s
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | ..............................
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | building log extracts (sent to the server as 'pilotLog')
[2022-08-22 14:23:51] 2022-08-22 12:23:00,539 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/pilotlog.txt
[2022-08-22 14:23:51] [end log extracts]
[2022-08-22 14:23:51] 2022-08-22 12:23:00,546 | WARNING | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2022-08-22 14:23:51] 2022-08-22 12:23:00,546 | WARNING | pilotErrorDiags = ["Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: comm
[2022-08-22 14:23:51] 2022-08-22 12:23:01,002 | INFO |
[2022-08-22 14:23:51] 2022-08-22 12:23:01,002 | INFO | job summary report
[2022-08-22 14:23:51] 2022-08-22 12:23:01,002 | INFO | --------------------------------------------------
[2022-08-22 14:23:51] 2022-08-22 12:23:01,003 | INFO | PanDA job id: 5515971838
[2022-08-22 14:23:51] 2022-08-22 12:23:01,003 | INFO | task id: NULL
[2022-08-22 14:23:51] 2022-08-22 12:23:01,003 | INFO | error 1/2: 1305: Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system
[2022-08-22 14:23:51] /bin/bash: Sim_tf.py: command not found
[2022-08-22 14:23:51]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,003 | INFO | error 2/2: 1187: Payload metadata does not exist
[2022-08-22 14:23:51] 2022-08-22 12:23:01,003 | INFO | pilot error code: 1187
[2022-08-22 14:23:51] 2022-08-22 12:23:01,004 | INFO | pilot error diag: metadata does not exist: /var/lib/boinc-client/slots/1/PanDA_Pilot-5515971838/metadata.xml
[2022-08-22 14:23:51] 2022-08-22 12:23:01,004 | INFO | status: LOG_TRANSFER = DONE
[2022-08-22 14:23:51] 2022-08-22 12:23:01,004 | INFO | pilot state: failed
[2022-08-22 14:23:51] 2022-08-22 12:23:01,004 | INFO | transexitcode: 127
[2022-08-22 14:23:51] 2022-08-22 12:23:01,004 | INFO | exeerrorcode: 0
[2022-08-22 14:23:51] 2022-08-22 12:23:01,005 | INFO | exeerrordiag:
[2022-08-22 14:23:51] 2022-08-22 12:23:01,005 | INFO | exitcode: 0
[2022-08-22 14:23:51] 2022-08-22 12:23:01,005 | INFO | exitmsg:
[2022-08-22 14:23:51] 2022-08-22 12:23:01,005 | INFO | cpuconsumptiontime: 4 s
[2022-08-22 14:23:51] 2022-08-22 12:23:01,006 | INFO | nevents: 0
[2022-08-22 14:23:51] 2022-08-22 12:23:01,006 | INFO | neventsw: 0
[2022-08-22 14:23:51] 2022-08-22 12:23:01,006 | INFO | pid: 2531648
[2022-08-22 14:23:51] 2022-08-22 12:23:01,006 | INFO | pgrp: 2531343
[2022-08-22 14:23:51] 2022-08-22 12:23:01,007 | INFO | corecount: 4
[2022-08-22 14:23:51] 2022-08-22 12:23:01,007 | INFO | event service: False
[2022-08-22 14:23:51] 2022-08-22 12:23:01,007 | INFO | sizes: {0: 2650565, 11: 2650565, 67: 2659339, 184: 2659283}
[2022-08-22 14:23:51] 2022-08-22 12:23:01,007 | INFO | --------------------------------------------------
[2022-08-22 14:23:51] 2022-08-22 12:23:01,007 | INFO |
[2022-08-22 14:23:51] 2022-08-22 12:23:01,008 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/1
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue jobs had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue payloads had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue data_in had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue data_out had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue current_data_in had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue validated_jobs had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue validated_payloads had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue finished_jobs had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue finished_payloads had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue finished_data_in had 1 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue finished_data_out had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,043 | INFO | queue failed_jobs had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,044 | INFO | queue failed_payloads had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,044 | INFO | queue failed_data_in had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,044 | INFO | queue failed_data_out had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,044 | INFO | queue completed_jobs had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,044 | INFO | queue completed_jobids has 1 job(s)
[2022-08-22 14:23:51] 2022-08-22 12:23:01,044 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2022-08-22 14:23:51] 2022-08-22 12:23:01,044 | INFO | job 5515971838 has completed (purged errors)
[2022-08-22 14:23:51] 2022-08-22 12:23:01,044 | INFO | overall cleanup function is called
[2022-08-22 14:23:51] 2022-08-22 12:23:02,047 | INFO | --- collectZombieJob: --- 10, [2531648]
[2022-08-22 14:23:51] 2022-08-22 12:23:02,047 | INFO | zombie collector trying to kill pid 2531648
[2022-08-22 14:23:51] 2022-08-22 12:23:02,048 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-08-22 14:23:51] 2022-08-22 12:23:03,052 | INFO | collected zombie processes
[2022-08-22 14:23:51] 2022-08-22 12:23:03,053 | INFO | will now attempt to kill all subprocesses of pid=2531648
[2022-08-22 14:23:51] 2022-08-22 12:23:03,124 | INFO | process IDs to be killed: [2531648] (in reverse order)
[2022-08-22 14:23:51] 2022-08-22 12:23:03,145 | WARNING | found no corresponding commands to process id(s)
[2022-08-22 14:23:51] 2022-08-22 12:23:03,145 | INFO | Do not look for orphan processes in BOINC jobs
[2022-08-22 14:23:51] 2022-08-22 12:23:03,145 | INFO | ready for new job
[2022-08-22 14:23:51] 2022-08-22 12:23:03,145 | INFO | pilot has finished for previous job - re-establishing logging
[2022-08-22 14:23:51] 2022-08-22 12:23:03,146 | INFO | ***************************************
[2022-08-22 14:23:51] 2022-08-22 12:23:03,146 | INFO | *** PanDA Pilot version 3.3.3 (1) ***
[2022-08-22 14:23:51] 2022-08-22 12:23:03,146 | INFO | ***************************************
[2022-08-22 14:23:51] 2022-08-22 12:23:03,146 | INFO |
[2022-08-22 14:23:51] 2022-08-22 12:23:03,146 | INFO | architecture information:
[2022-08-22 14:23:51] 2022-08-22 12:23:03,180 | INFO |
[2022-08-22 14:23:51] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2022-08-22 14:23:51] Distributor ID: CentOS
[2022-08-22 14:23:51] Description: CentOS Linux release 7.9.2009 (Core)
[2022-08-22 14:23:51] Release: 7.9.2009
[2022-08-22 14:23:51] Codename: Core
[2022-08-22 14:23:51] 2022-08-22 12:23:03,181 | INFO | ***************************************
[2022-08-22 14:23:51] 2022-08-22 12:23:03,684 | INFO | executing command: df -mP /var/lib/boinc-client/slots/1
[2022-08-22 14:23:51] 2022-08-22 12:23:03,716 | INFO | sufficient remaining disk space (150545104896 B)
[2022-08-22 14:23:51] 2022-08-22 12:23:03,717 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2022-08-22 14:23:51] 2022-08-22 12:23:03,717 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-08-22 14:23:51] 2022-08-22 12:23:03,811 | INFO | [payload] validate_post thread has finished
[2022-08-22 14:23:51] 2022-08-22 12:23:03,830 | INFO | [payload] execute_payloads thread has finished
[2022-08-22 14:23:51] 2022-08-22 12:23:04,185 | INFO | [payload] validate_pre thread has finished
[2022-08-22 14:23:51] 2022-08-22 12:23:04,323 | INFO | [monitor] control thread has ended
[2022-08-22 14:23:51] 2022-08-22 12:23:04,356 | INFO | [payload] failed_post thread has finished
[2022-08-22 14:23:51] 2022-08-22 12:23:04,930 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2022-08-22 14:23:51] 2022-08-22 12:23:05,588 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2022-08-22 14:23:51] 2022-08-22 12:23:19,759 | INFO | [payload] run_realtimelog thread has finished
[2022-08-22 14:23:51] 2022-08-22 12:23:51,483 | WARNING | no jobs in monitored_payloads queue (waited for 62 s)
[2022-08-22 14:23:51] 2022-08-22 12:23:51,771 | INFO | end of generic workflow (traces error code: 0)
[2022-08-22 14:23:51] 2022-08-22 12:23:51,772 | INFO | traces error code: 0
[2022-08-22 14:23:51] 2022-08-22 12:23:51,772 | INFO | pilot has finished
[2022-08-22 14:23:51] 2022-08-22 12:23:51,869 [wrapper] ==== pilot stdout END ====
[2022-08-22 14:23:51] 2022-08-22 12:23:51,872 [wrapper] ==== wrapper stdout RESUME ====
[2022-08-22 14:23:51] 2022-08-22 12:23:51,874 [wrapper] pilotpid: 2528152
[2022-08-22 14:23:51] 2022-08-22 12:23:51,876 [wrapper] Pilot exit status: 0
[2022-08-22 14:23:51] 2022-08-22 12:23:51,881 [wrapper] pandaids: 5515971838
[2022-08-22 14:23:51] 2022-08-22 12:23:51,885 [wrapper] apfmon messages muted
[2022-08-22 14:23:51] 2022-08-22 12:23:51,886 [wrapper] Test setup, not cleaning
[2022-08-22 14:23:51] 2022-08-22 12:23:51,888 [wrapper] ==== wrapper stdout END ====
[2022-08-22 14:23:51] 2022-08-22 12:23:51,890 [wrapper] ==== wrapper stderr END ====
[2022-08-22 14:23:51] 2022-08-22 12:23:51,893 [wrapper] wrapperexiting ec=0, duration=402
[2022-08-22 14:23:51] 2022-08-22 12:23:51,895 [wrapper] apfmon messages muted
[2022-08-22 14:23:51] *** Error codes and diagnostics ***
[2022-08-22 14:23:51] "exeErrorCode": 0,
[2022-08-22 14:23:51] "exeErrorDiag": "",
[2022-08-22 14:23:51] "pilotErrorCode": 1305,
[2022-08-22 14:23:51] "pilotErrorDiag": "Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: command not found\n",
[2022-08-22 14:23:51] *** Listing of results directory ***
[2022-08-22 14:23:51] total 40844
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 358966 Aug 22 13:28 pilot3.tar.gz
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 4534 Aug 22 14:03 queuedata.json
[2022-08-22 14:23:51] -rwx------ 1 boinc boinc 27162 Aug 22 14:03 runpilot2-wrapper.sh
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 107 Aug 22 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2022-08-22 14:23:51] -rwxr-xr-x 1 boinc boinc 8176 Aug 22 14:17 run_atlas
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 112 Aug 22 14:17 job.xml
[2022-08-22 14:23:51] -rw-r--r-- 2 boinc boinc 16697 Aug 22 14:17 start_atlas.sh
[2022-08-22 14:23:51] drwxrwx--x 2 boinc boinc 4096 Aug 22 14:17 shared
[2022-08-22 14:23:51] -rw-r--r-- 2 boinc boinc 369750 Aug 22 14:17 input.tar.gz
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 6541 Aug 22 14:17 init_data.xml
[2022-08-22 14:23:51] -rw-r--r-- 2 boinc boinc 37960264 Aug 22 14:17 EVNT.04972714._000040.pool.root.1
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 0 Aug 22 14:17 boinc_lockfile
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 2802 Aug 22 14:17 pandaJob.out
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 1015354 Aug 22 14:19 agis_schedconf.cvmfs.json
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 1778034 Aug 22 14:19 agis_ddmendpoints.agis.ALL.json
[2022-08-22 14:23:51] drwx------ 4 boinc boinc 4096 Aug 22 14:19 pilot3
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 6400 Aug 22 14:21 8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log.tgz
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 2276 Aug 22 14:23 heartbeat.json
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 528 Aug 22 14:23 boinc_task_state.xml
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 8192 Aug 22 14:23 boinc_mmap_file
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 22 Aug 22 14:23 wrapper_checkpoint.txt
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 1974 Aug 22 14:23 pilotlog.txt
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 64480 Aug 22 14:23 8a6e718d-c92a-4ece-9644-0006492492801-1661169792_98767.1.job.log
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 251 Aug 22 14:23 output.list
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 9352 Aug 22 14:23 runtime_log.err
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 722 Aug 22 14:23 runtime_log
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 81920 Aug 22 14:23 result.tar.gz
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 550 Aug 22 14:23 0jPMDmKKLk1n7Olcko1bjSoqABFKDmABFKDmKFbSDm4xIKDmViKsym.diag
[2022-08-22 14:23:51] -rw-r--r-- 1 boinc boinc 23005 Aug 22 14:23 stderr.txt
[2022-08-22 14:23:51] No HITS result produced
[2022-08-22 14:23:51] *** Contents of shared directory: ***
[2022-08-22 14:23:51] total 37540
[2022-08-22 14:23:51] -rw-r--r-- 2 boinc boinc 16697 Aug 22 14:17 start_atlas.sh
[2022-08-22 14:23:51] -rw-r--r-- 2 boinc boinc 369750 Aug 22 14:17 input.tar.gz
[2022-08-22 14:23:51] -rw-r--r-- 2 boinc boinc 37960264 Aug 22 14:17 ATLAS.root_0
[2022-08-22 14:23:51] -rw------- 1 boinc boinc 81920 Aug 22 14:23 result.tar.gz
14:23:53 (2519307): run_atlas exited; CPU time 8.174199
14:23:53 (2519307): called boinc_finish(0)
</stderr_txt>
]]>
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