Name | 1GOMDmNKLk1n7Olcko1bjSoqABFKDmABFKDmKFbSDm7xIKDmDSMWym_0 |
Workunit | 2205564 |
Created | 22 Aug 2022, 12:03:20 UTC |
Sent | 22 Aug 2022, 12:17:19 UTC |
Report deadline | 29 Aug 2022, 12:17:19 UTC |
Received | 22 Aug 2022, 12:37:44 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4636 |
Run time | 8 min 57 sec |
CPU time | 8 sec |
Validate state | Valid |
Credit | 38.41 |
Device peak FLOPS | 30.89 GFLOPS |
Application version | ATLAS Simulation v1.24 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 62.52 MB |
Peak swap size | 1.42 GB |
Peak disk usage | 78.48 MB |
<core_client_version>7.18.1</core_client_version> <![CDATA[ <stderr_txt> 14:23:56 (2538592): wrapper (7.7.26015): starting 14:23:56 (2538592): wrapper: running run_atlas (--nthreads 4) [2022-08-22 14:23:56] Arguments: --nthreads 4 [2022-08-22 14:23:56] Threads: 4 [2022-08-22 14:23:56] Checking for CVMFS [2022-08-22 14:23:56] Probing /cvmfs/atlas.cern.ch... OK [2022-08-22 14:23:56] Probing /cvmfs/atlas-condb.cern.ch... OK [2022-08-22 14:23:56] Running cvmfs_config stat atlas.cern.ch [2022-08-22 14:23:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2022-08-22 14:23:56] 2.8.2.0 2497526 11 33436 108507 0 25 3123584 4096001 0 130560 0 120621 99.990 974 3015 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://137.138.63.73:3128 1 [2022-08-22 14:23:56] CVMFS is ok [2022-08-22 14:23:56] Efficiency of ATLAS tasks can be improved by the following measure(s): [2022-08-22 14:23:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2022-08-22 14:23:56] Further information can be found at the LHC@home message board. [2022-08-22 14:23:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2022-08-22 14:23:56] Checking for apptainer binary... [2022-08-22 14:23:56] Using apptainer found in PATH at /usr/bin/apptainer [2022-08-22 14:23:56] Running /usr/bin/apptainer --version [2022-08-22 14:23:56] apptainer version 1.1.0-rc.2 [2022-08-22 14:23:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2022-08-22 14:23:56] pcoslo6 [2022-08-22 14:23:56] apptainer works [2022-08-22 14:23:56] Set ATHENA_PROC_NUMBER=4 [2022-08-22 14:23:56] Starting ATLAS job with PandaID=5515971838 [2022-08-22 14:23:56] Try creating a directory in /tmp [2022-08-22 14:23:56] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX [2022-08-22 14:23:56] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system [2022-08-22 14:23:56] mktemp /tmp failed [2022-08-22 14:23:56] Try creating a directory in /var/tmp [2022-08-22 14:23:56] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX [2022-08-22 14:23:56] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system [2022-08-22 14:23:56] mktemp /var/tmp failed [2022-08-22 14:23:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2022-08-22 14:32:50] *** The last 200 lines of the pilot log: *** [2022-08-22 14:32:50] is_tar=False [2022-08-22 14:32:50] lfn=8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log.tgz [2022-08-22 14:32:50] mtime=0 [2022-08-22 14:32:50] protocol_id=None [2022-08-22 14:32:50] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}] [2022-08-22 14:32:50] replicas=None [2022-08-22 14:32:50] scope=hc_test [2022-08-22 14:32:50] status=None [2022-08-22 14:32:50] status_code=0 [2022-08-22 14:32:50] storage_token= [2022-08-22 14:32:50] surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log.tgz [2022-08-22 14:32:50] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/54/6e/8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log.tgz [2022-08-22 14:32:50] workdir=None [2022-08-22 14:32:50] ] [2022-08-22 14:32:50] 2022-08-22 12:30:02,581 | INFO | transferring file 8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log.tgz from /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece [2022-08-22 14:32:50] 2022-08-22 12:30:02,581 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log.tgz /var/l [2022-08-22 14:32:50] 2022-08-22 12:30:02,591 | INFO | Adding to output.list: 8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/54/6e/8a [2022-08-22 14:32:50] 2022-08-22 12:30:02,592 | INFO | executing command: ps aux -q 2549093 [2022-08-22 14:32:50] 2022-08-22 12:30:02,603 | INFO | summary of transferred files: [2022-08-22 14:32:50] 2022-08-22 12:30:02,604 | INFO | -- lfn=8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log.tgz, status_code=0, status=transferred [2022-08-22 14:32:50] 2022-08-22 12:30:02,604 | INFO | stage-out finished correctly [2022-08-22 14:32:50] 2022-08-22 12:30:02,634 | INFO | finished stage-out (of log) for failed payload [2022-08-22 14:32:50] 2022-08-22 12:30:03,217 | INFO | job 5515971838 has state=failed [2022-08-22 14:32:50] 2022-08-22 12:30:03,218 | INFO | preparing for final server update for job 5515971838 in state='failed' [2022-08-22 14:32:50] 2022-08-22 12:30:45,369 | INFO | 142.48399829864502s have passed since pilot start [2022-08-22 14:32:50] 2022-08-22 12:30:46,501 | INFO | monitor loop #1: job 0:5515971838 is in state 'failed' [2022-08-22 14:32:50] 2022-08-22 12:30:46,501 | INFO | will abort job monitoring soon since job state=failed (job is still in queue) [2022-08-22 14:32:50] 2022-08-22 12:31:48,040 | INFO | monitor loop #2: job 0:5515971838 is in state 'failed' [2022-08-22 14:32:50] 2022-08-22 12:31:48,041 | INFO | will abort job monitoring soon since job state=failed (job is still in queue) [2022-08-22 14:32:50] 2022-08-22 12:31:58,661 | INFO | proceeding with final server update [2022-08-22 14:32:50] 2022-08-22 12:31:58,662 | WARNING | path does not exist: /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_output.txt [2022-08-22 14:32:50] 2022-08-22 12:31:58,663 | INFO | pilot will not update the server (heartbeat message will be written to file) [2022-08-22 14:32:50] 2022-08-22 12:31:58,663 | INFO | job 5515971838 has failed - writing final server update [2022-08-22 14:32:50] 2022-08-22 12:31:58,663 | WARNING | making sure that job.state is set to failed since a pilot error code is set [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | WARNING | found no stored workdir sizes [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | INFO | will not add max space = 0 B to job metrics [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | INFO | payload/TRF did not report the number of read events [2022-08-22 14:32:50] 2022-08-22 12:31:58,688 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | neither /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_summary.json, nor /var/lib/boinc-client/slots/0/memory_monitor_summary.json exist [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | WARNING | file does not exist either: /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_output.txt [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | memory summary dictionary not yet available [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | .............................. [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | . Timing measurements: [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . get job = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . initial setup = 20 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . payload setup = 1 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . total setup = 21 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . stage-in = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . payload execution = 2 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . stage-out = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | .............................. [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | building log extracts (sent to the server as 'pilotLog') [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/pilotlog.txt [2022-08-22 14:32:50] 2022-08-22 12:31:58,752 | WARNING | detected the following tail of warning/fatal messages in the pilot log: [2022-08-22 14:32:50] - Log from pilotlog.txt - [2022-08-22 14:32:50] 2022-08-22 12:31:58,663 | WARNING | making sure that job.state is set to failed since a pilot error code is set [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | WARNING | found no stored workdir sizes [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | INFO | will not add max space = 0 B to job metrics [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | INFO | payload/TRF did not report the number of read events [2022-08-22 14:32:50] 2022-08-22 12:31:58,688 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | neither /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_summary.json, nor /var/lib/boinc-client/slots/0/memory_monitor_summary.json exist [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | WARNING | file does not exist either: /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_output.txt [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | memory summary dictionary not yet available [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | .............................. [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | . Timing measurements: [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . get job = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . initial setup = 20 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . payload setup = 1 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . total setup = 21 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . stage-in = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . payload execution = 2 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . stage-out = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | .............................. [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | building log extracts (sent to the server as 'pilotLog') [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/pilotlog.txt [2022-08-22 14:32:50] 2022-08-22 12:31:58,753 | WARNING | [2022-08-22 14:32:50] [begin log extracts] [2022-08-22 14:32:50] - Log from pilotlog.txt - [2022-08-22 14:32:50] 2022-08-22 12:31:58,663 | WARNING | making sure that job.state is set to failed since a pilot error code is set [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | WARNING | found no stored workdir sizes [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | INFO | will not add max space = 0 B to job metrics [2022-08-22 14:32:50] 2022-08-22 12:31:58,664 | INFO | payload/TRF did not report the number of read events [2022-08-22 14:32:50] 2022-08-22 12:31:58,688 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | neither /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_summary.json, nor /var/lib/boinc-client/slots/0/memory_monitor_summary.json exist [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | WARNING | file does not exist either: /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_output.txt [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | memory summary dictionary not yet available [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | .............................. [2022-08-22 14:32:50] 2022-08-22 12:31:58,745 | INFO | . Timing measurements: [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . get job = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . initial setup = 20 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . payload setup = 1 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . total setup = 21 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . stage-in = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . payload execution = 2 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | . stage-out = 0 s [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | .............................. [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | building log extracts (sent to the server as 'pilotLog') [2022-08-22 14:32:50] 2022-08-22 12:31:58,746 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/pilotlog.txt [2022-08-22 14:32:50] [end log extracts] [2022-08-22 14:32:50] 2022-08-22 12:31:58,753 | WARNING | pilotErrorCodes = [1305, 1187] (will report primary/first error code) [2022-08-22 14:32:50] 2022-08-22 12:31:58,753 | WARNING | pilotErrorDiags = ["Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: comm [2022-08-22 14:32:50] 2022-08-22 12:31:59,198 | INFO | [2022-08-22 14:32:50] 2022-08-22 12:31:59,198 | INFO | job summary report [2022-08-22 14:32:50] 2022-08-22 12:31:59,198 | INFO | -------------------------------------------------- [2022-08-22 14:32:50] 2022-08-22 12:31:59,199 | INFO | PanDA job id: 5515971838 [2022-08-22 14:32:50] 2022-08-22 12:31:59,199 | INFO | task id: NULL [2022-08-22 14:32:50] 2022-08-22 12:31:59,199 | INFO | error 1/2: 1305: Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system [2022-08-22 14:32:50] /bin/bash: Sim_tf.py: command not found [2022-08-22 14:32:50] [2022-08-22 14:32:50] 2022-08-22 12:31:59,199 | INFO | error 2/2: 1187: Payload metadata does not exist [2022-08-22 14:32:50] 2022-08-22 12:31:59,199 | INFO | pilot error code: 1187 [2022-08-22 14:32:50] 2022-08-22 12:31:59,200 | INFO | pilot error diag: metadata does not exist: /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/metadata.xml [2022-08-22 14:32:50] 2022-08-22 12:31:59,200 | INFO | status: LOG_TRANSFER = DONE [2022-08-22 14:32:50] 2022-08-22 12:31:59,200 | INFO | pilot state: failed [2022-08-22 14:32:50] 2022-08-22 12:31:59,200 | INFO | transexitcode: 127 [2022-08-22 14:32:50] 2022-08-22 12:31:59,200 | INFO | exeerrorcode: 0 [2022-08-22 14:32:50] 2022-08-22 12:31:59,201 | INFO | exeerrordiag: [2022-08-22 14:32:50] 2022-08-22 12:31:59,201 | INFO | exitcode: 0 [2022-08-22 14:32:50] 2022-08-22 12:31:59,201 | INFO | exitmsg: [2022-08-22 14:32:50] 2022-08-22 12:31:59,201 | INFO | cpuconsumptiontime: 3 s [2022-08-22 14:32:50] 2022-08-22 12:31:59,201 | INFO | nevents: 0 [2022-08-22 14:32:50] 2022-08-22 12:31:59,201 | INFO | neventsw: 0 [2022-08-22 14:32:50] 2022-08-22 12:31:59,202 | INFO | pid: 2552164 [2022-08-22 14:32:50] 2022-08-22 12:31:59,202 | INFO | pgrp: 2552164 [2022-08-22 14:32:50] 2022-08-22 12:31:59,202 | INFO | corecount: 4 [2022-08-22 14:32:50] 2022-08-22 12:31:59,203 | INFO | event service: False [2022-08-22 14:32:50] 2022-08-22 12:31:59,203 | INFO | sizes: {0: 2650565, 11: 2650565, 67: 2655024, 68: 2659367, 184: 2659311} [2022-08-22 14:32:50] 2022-08-22 12:31:59,203 | INFO | -------------------------------------------------- [2022-08-22 14:32:50] 2022-08-22 12:31:59,204 | INFO | [2022-08-22 14:32:50] 2022-08-22 12:31:59,204 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/0 [2022-08-22 14:32:50] 2022-08-22 12:31:59,232 | INFO | queue jobs had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,232 | INFO | queue payloads had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,232 | INFO | queue data_in had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,232 | INFO | queue data_out had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,232 | INFO | queue current_data_in had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,232 | INFO | queue validated_jobs had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,232 | INFO | queue validated_payloads had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue monitored_payloads had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue finished_jobs had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue finished_payloads had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue finished_data_in had 1 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue finished_data_out had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue failed_jobs had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue failed_payloads had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue failed_data_in had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue failed_data_out had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue completed_jobs had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue completed_jobids has 1 job(s) [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | job 5515971838 has completed (purged errors) [2022-08-22 14:32:50] 2022-08-22 12:31:59,233 | INFO | overall cleanup function is called [2022-08-22 14:32:50] 2022-08-22 12:32:00,238 | INFO | --- collectZombieJob: --- 10, [2552164] [2022-08-22 14:32:50] 2022-08-22 12:32:00,239 | INFO | zombie collector trying to kill pid 2552164 [2022-08-22 14:32:50] 2022-08-22 12:32:00,239 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2022-08-22 14:32:50] 2022-08-22 12:32:01,243 | INFO | collected zombie processes [2022-08-22 14:32:50] 2022-08-22 12:32:01,243 | INFO | will now attempt to kill all subprocesses of pid=2552164 [2022-08-22 14:32:50] 2022-08-22 12:32:01,306 | INFO | process IDs to be killed: [2552164] (in reverse order) [2022-08-22 14:32:50] 2022-08-22 12:32:01,327 | WARNING | found no corresponding commands to process id(s) [2022-08-22 14:32:50] 2022-08-22 12:32:01,327 | INFO | Do not look for orphan processes in BOINC jobs [2022-08-22 14:32:50] 2022-08-22 12:32:01,327 | INFO | ready for new job [2022-08-22 14:32:50] 2022-08-22 12:32:01,327 | INFO | pilot has finished for previous job - re-establishing logging [2022-08-22 14:32:50] 2022-08-22 12:32:01,327 | INFO | *************************************** [2022-08-22 14:32:50] 2022-08-22 12:32:01,327 | INFO | *** PanDA Pilot version 3.3.3 (1) *** [2022-08-22 14:32:50] 2022-08-22 12:32:01,327 | INFO | *************************************** [2022-08-22 14:32:50] 2022-08-22 12:32:01,328 | INFO | [2022-08-22 14:32:50] 2022-08-22 12:32:01,351 | INFO | architecture information: [2022-08-22 14:32:50] 2022-08-22 12:32:01,384 | INFO | [2022-08-22 14:32:50] LSB Version: :core-4.1-amd64:core-4.1-noarch [2022-08-22 14:32:50] Distributor ID: CentOS [2022-08-22 14:32:50] Description: CentOS Linux release 7.9.2009 (Core) [2022-08-22 14:32:50] Release: 7.9.2009 [2022-08-22 14:32:50] Codename: Core [2022-08-22 14:32:50] 2022-08-22 12:32:01,384 | INFO | *************************************** [2022-08-22 14:32:50] 2022-08-22 12:32:01,888 | INFO | executing command: df -mP /var/lib/boinc-client/slots/0 [2022-08-22 14:32:50] 2022-08-22 12:32:01,898 | INFO | sufficient remaining disk space (150543007744 B) [2022-08-22 14:32:50] 2022-08-22 12:32:01,898 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2022-08-22 14:32:50] 2022-08-22 12:32:01,898 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2022-08-22 14:32:50] 2022-08-22 12:32:02,027 | INFO | [payload] validate_post thread has finished [2022-08-22 14:32:50] 2022-08-22 12:32:02,146 | INFO | [payload] execute_payloads thread has finished [2022-08-22 14:32:50] 2022-08-22 12:32:02,395 | INFO | [payload] validate_pre thread has finished [2022-08-22 14:32:50] 2022-08-22 12:32:02,526 | INFO | [monitor] control thread has ended [2022-08-22 14:32:50] 2022-08-22 12:32:02,679 | INFO | [payload] failed_post thread has finished [2022-08-22 14:32:50] 2022-08-22 12:32:03,249 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2022-08-22 14:32:50] 2022-08-22 12:32:03,791 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2022-08-22 14:32:50] 2022-08-22 12:32:17,816 | INFO | [payload] run_realtimelog thread has finished [2022-08-22 14:32:50] 2022-08-22 12:32:49,642 | WARNING | no jobs in monitored_payloads queue (waited for 61 s) [2022-08-22 14:32:50] 2022-08-22 12:32:49,987 | INFO | end of generic workflow (traces error code: 0) [2022-08-22 14:32:50] 2022-08-22 12:32:49,988 | INFO | traces error code: 0 [2022-08-22 14:32:50] 2022-08-22 12:32:49,988 | INFO | pilot has finished [2022-08-22 14:32:50] 2022-08-22 12:32:50,096 [wrapper] ==== pilot stdout END ==== [2022-08-22 14:32:50] 2022-08-22 12:32:50,098 [wrapper] ==== wrapper stdout RESUME ==== [2022-08-22 14:32:50] 2022-08-22 12:32:50,099 [wrapper] pilotpid: 2549093 [2022-08-22 14:32:50] 2022-08-22 12:32:50,101 [wrapper] Pilot exit status: 0 [2022-08-22 14:32:50] 2022-08-22 12:32:50,107 [wrapper] pandaids: 5515971838 [2022-08-22 14:32:50] 2022-08-22 12:32:50,110 [wrapper] apfmon messages muted [2022-08-22 14:32:50] 2022-08-22 12:32:50,112 [wrapper] Test setup, not cleaning [2022-08-22 14:32:50] 2022-08-22 12:32:50,113 [wrapper] ==== wrapper stdout END ==== [2022-08-22 14:32:50] 2022-08-22 12:32:50,115 [wrapper] ==== wrapper stderr END ==== [2022-08-22 14:32:50] 2022-08-22 12:32:50,118 [wrapper] wrapperexiting ec=0, duration=534 [2022-08-22 14:32:50] 2022-08-22 12:32:50,120 [wrapper] apfmon messages muted [2022-08-22 14:32:50] *** Error codes and diagnostics *** [2022-08-22 14:32:50] "exeErrorCode": 0, [2022-08-22 14:32:50] "exeErrorDiag": "", [2022-08-22 14:32:50] "pilotErrorCode": 1305, [2022-08-22 14:32:50] "pilotErrorDiag": "Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: command not found\n", [2022-08-22 14:32:50] *** Listing of results directory *** [2022-08-22 14:32:50] total 40844 [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 358966 Aug 22 13:28 pilot3.tar.gz [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 4534 Aug 22 14:03 queuedata.json [2022-08-22 14:32:50] -rwx------ 1 boinc boinc 27162 Aug 22 14:03 runpilot2-wrapper.sh [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 107 Aug 22 14:23 wrapper_26015_x86_64-pc-linux-gnu [2022-08-22 14:32:50] -rwxr-xr-x 1 boinc boinc 8176 Aug 22 14:23 run_atlas [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 112 Aug 22 14:23 job.xml [2022-08-22 14:32:50] -rw-r--r-- 2 boinc boinc 16697 Aug 22 14:23 start_atlas.sh [2022-08-22 14:32:50] drwxrwx--x 2 boinc boinc 4096 Aug 22 14:23 shared [2022-08-22 14:32:50] -rw-r--r-- 2 boinc boinc 369751 Aug 22 14:23 input.tar.gz [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 6541 Aug 22 14:23 init_data.xml [2022-08-22 14:32:50] -rw-r--r-- 2 boinc boinc 37960264 Aug 22 14:23 EVNT.04972714._000040.pool.root.1 [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 0 Aug 22 14:23 boinc_lockfile [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 2802 Aug 22 14:23 pandaJob.out [2022-08-22 14:32:50] -rw------- 1 boinc boinc 1015354 Aug 22 14:28 agis_schedconf.cvmfs.json [2022-08-22 14:32:50] -rw------- 1 boinc boinc 1778034 Aug 22 14:28 agis_ddmendpoints.agis.ALL.json [2022-08-22 14:32:50] drwx------ 4 boinc boinc 4096 Aug 22 14:28 pilot3 [2022-08-22 14:32:50] -rw------- 1 boinc boinc 6391 Aug 22 14:30 8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log.tgz [2022-08-22 14:32:50] -rw------- 1 boinc boinc 2277 Aug 22 14:31 heartbeat.json [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 528 Aug 22 14:32 boinc_task_state.xml [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 8192 Aug 22 14:32 boinc_mmap_file [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 22 Aug 22 14:32 wrapper_checkpoint.txt [2022-08-22 14:32:50] -rw------- 1 boinc boinc 1974 Aug 22 14:32 pilotlog.txt [2022-08-22 14:32:50] -rw------- 1 boinc boinc 64646 Aug 22 14:32 8a6e718d-c92a-4ece-9644-0006492492862-1661169794_98767.1.job.log [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 722 Aug 22 14:32 runtime_log [2022-08-22 14:32:50] -rw------- 1 boinc boinc 81920 Aug 22 14:32 result.tar.gz [2022-08-22 14:32:50] -rw------- 1 boinc boinc 251 Aug 22 14:32 output.list [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 9352 Aug 22 14:32 runtime_log.err [2022-08-22 14:32:50] -rw------- 1 boinc boinc 549 Aug 22 14:32 1GOMDmNKLk1n7Olcko1bjSoqABFKDmABFKDmKFbSDm7xIKDmDSMWym.diag [2022-08-22 14:32:50] -rw-r--r-- 1 boinc boinc 23103 Aug 22 14:32 stderr.txt [2022-08-22 14:32:50] No HITS result produced [2022-08-22 14:32:50] *** Contents of shared directory: *** [2022-08-22 14:32:50] total 37540 [2022-08-22 14:32:50] -rw-r--r-- 2 boinc boinc 16697 Aug 22 14:23 start_atlas.sh [2022-08-22 14:32:50] -rw-r--r-- 2 boinc boinc 369751 Aug 22 14:23 input.tar.gz [2022-08-22 14:32:50] -rw-r--r-- 2 boinc boinc 37960264 Aug 22 14:23 ATLAS.root_0 [2022-08-22 14:32:50] -rw------- 1 boinc boinc 81920 Aug 22 14:32 result.tar.gz 14:32:52 (2538592): run_atlas exited; CPU time 8.602378 14:32:52 (2538592): called boinc_finish(0) </stderr_txt> ]]>
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