Name 0bIKDmILLk1n7Olcko1bjSoqABFKDmABFKDmKFbSDmvyIKDmPVV0nm_0
Workunit 2205618
Created 22 Aug 2022, 12:04:20 UTC
Sent 22 Aug 2022, 13:10:00 UTC
Report deadline 29 Aug 2022, 13:10:00 UTC
Received 22 Aug 2022, 13:22:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4636
Run time 5 min 43 sec
CPU time 7 sec
Validate state Valid
Credit 3.18
Device peak FLOPS 4.00 GFLOPS
Application version ATLAS Simulation v1.24 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 59.92 MB
Peak swap size 1.42 GB
Peak disk usage 78.41 MB

Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
15:16:43 (2669955): wrapper (7.7.26015): starting
15:16:43 (2669955): wrapper: running run_atlas (--nthreads 4)
[2022-08-22 15:16:43] Arguments: --nthreads 4
[2022-08-22 15:16:43] Threads: 4
[2022-08-22 15:16:43] Checking for CVMFS
[2022-08-22 15:16:43] Probing /cvmfs/atlas.cern.ch... OK
[2022-08-22 15:16:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-08-22 15:16:43] Running cvmfs_config stat atlas.cern.ch
[2022-08-22 15:16:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-08-22 15:16:43] 2.8.2.0 2564521 31 35848 108508 1 19 3125401 4096001 79 130560 0 306965 99.985 814 544 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://137.138.123.72:3128 1
[2022-08-22 15:16:43] CVMFS is ok
[2022-08-22 15:16:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2022-08-22 15:16:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2022-08-22 15:16:43] Further information can be found at the LHC@home message board.
[2022-08-22 15:16:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-08-22 15:16:43] Checking for apptainer binary...
[2022-08-22 15:16:43] Using apptainer found in PATH at /usr/bin/apptainer
[2022-08-22 15:16:43] Running /usr/bin/apptainer --version
[2022-08-22 15:16:43] apptainer version 1.1.0-rc.2
[2022-08-22 15:16:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-08-22 15:16:43] pcoslo6
[2022-08-22 15:16:43] apptainer works
[2022-08-22 15:16:43] Set ATHENA_PROC_NUMBER=4
[2022-08-22 15:16:43] Starting ATLAS job with PandaID=5515971838
[2022-08-22 15:16:43] Try creating a directory in /tmp
[2022-08-22 15:16:43] /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /tmp/tmp.XXXXX
[2022-08-22 15:16:43] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system
[2022-08-22 15:16:43] mktemp /tmp failed
[2022-08-22 15:16:43] Try creating a directory in /var/tmp
[2022-08-22 15:16:43] /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /var/tmp/tmp.XXXXX
[2022-08-22 15:16:43] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system
[2022-08-22 15:16:43] mktemp /var/tmp failed
[2022-08-22 15:16:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-08-22 15:22:24]  *** The last 200 lines of the pilot log: ***
[2022-08-22 15:22:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-08-22 15:22:24]  is_tar=False
[2022-08-22 15:22:24]  lfn=8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log.tgz
[2022-08-22 15:22:24]  mtime=0
[2022-08-22 15:22:24]  protocol_id=None
[2022-08-22 15:22:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-08-22 15:22:24]  replicas=None
[2022-08-22 15:22:24]  scope=hc_test
[2022-08-22 15:22:24]  status=None
[2022-08-22 15:22:24]  status_code=0
[2022-08-22 15:22:24]  storage_token=
[2022-08-22 15:22:24]  surl=/home/boinc/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log.tgz
[2022-08-22 15:22:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/f8/e0/8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log.tgz
[2022-08-22 15:22:24]  workdir=None
[2022-08-22 15:22:24] ]
[2022-08-22 15:22:24] 2022-08-22 13:19:37,639 | INFO     | transferring file 8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log.tgz from /home/boinc/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006
[2022-08-22 15:22:24] 2022-08-22 13:19:37,639 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log.tgz /home/boinc/slot
[2022-08-22 15:22:24] 2022-08-22 13:19:37,650 | INFO     | Adding to output.list: 8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/f8/e0/8a
[2022-08-22 15:22:24] 2022-08-22 13:19:37,651 | INFO     | executing command: ps aux -q 2679953
[2022-08-22 15:22:24] 2022-08-22 13:19:37,662 | INFO     | summary of transferred files:
[2022-08-22 15:22:24] 2022-08-22 13:19:37,662 | INFO     |  -- lfn=8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log.tgz, status_code=0, status=transferred
[2022-08-22 15:22:24] 2022-08-22 13:19:37,662 | INFO     | stage-out finished correctly
[2022-08-22 15:22:24] 2022-08-22 13:19:39,016 | INFO     | finished stage-out (of log) for failed payload
[2022-08-22 15:22:24] 2022-08-22 13:19:39,046 | INFO     | job 5515971838 has state=failed
[2022-08-22 15:22:24] 2022-08-22 13:19:39,046 | INFO     | preparing for final server update for job 5515971838 in state='failed'
[2022-08-22 15:22:24] 2022-08-22 13:20:20,107 | INFO     | monitor loop #0: job 0:5515971838 is in state 'failed'
[2022-08-22 15:22:24] 2022-08-22 13:20:20,107 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2022-08-22 15:22:24] 2022-08-22 13:21:20,576 | INFO     | 142.54257798194885s have passed since pilot start
[2022-08-22 15:22:24] 2022-08-22 13:21:21,709 | INFO     | monitor loop #1: job 0:5515971838 is in state 'failed'
[2022-08-22 15:22:24] 2022-08-22 13:21:21,709 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,457 | INFO     | proceeding with final server update
[2022-08-22 15:22:24] 2022-08-22 13:21:34,458 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,458 | INFO     | job 5515971838 has failed - writing final server update
[2022-08-22 15:22:24] 2022-08-22 13:21:34,459 | WARNING  | making sure that job.state is set to failed since a pilot error code is set
[2022-08-22 15:22:24] 2022-08-22 13:21:34,459 | WARNING  | found no stored workdir sizes
[2022-08-22 15:22:24] 2022-08-22 13:21:34,460 | INFO     | will not add max space = 0 B to job metrics
[2022-08-22 15:22:24] 2022-08-22 13:21:34,460 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,461 | INFO     | payload/TRF did not report the number of read events
[2022-08-22 15:22:24] 2022-08-22 13:21:34,480 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | memory information not available: 'Max'
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | ..............................
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . Timing measurements:
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . get job = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . initial setup = 21 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . payload setup = 1 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . total setup = 22 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . stage-in = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . payload execution = 2 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . stage-out = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | ..............................
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-5515971838/pilotlog.txt
[2022-08-22 15:22:24] 2022-08-22 13:21:34,542 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2022-08-22 15:22:24] - Log from pilotlog.txt -
[2022-08-22 15:22:24] 2022-08-22 13:21:34,459 | WARNING  | making sure that job.state is set to failed since a pilot error code is set
[2022-08-22 15:22:24] 2022-08-22 13:21:34,459 | WARNING  | found no stored workdir sizes
[2022-08-22 15:22:24] 2022-08-22 13:21:34,460 | INFO     | will not add max space = 0 B to job metrics
[2022-08-22 15:22:24] 2022-08-22 13:21:34,460 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,461 | INFO     | payload/TRF did not report the number of read events
[2022-08-22 15:22:24] 2022-08-22 13:21:34,480 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | memory information not available: 'Max'
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | ..............................
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . Timing measurements:
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . get job = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . initial setup = 21 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . payload setup = 1 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . total setup = 22 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . stage-in = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . payload execution = 2 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . stage-out = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | ..............................
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-5515971838/pilotlog.txt
[2022-08-22 15:22:24] 2022-08-22 13:21:34,542 | WARNING  | 
[2022-08-22 15:22:24] [begin log extracts]
[2022-08-22 15:22:24] - Log from pilotlog.txt -
[2022-08-22 15:22:24] 2022-08-22 13:21:34,459 | WARNING  | making sure that job.state is set to failed since a pilot error code is set
[2022-08-22 15:22:24] 2022-08-22 13:21:34,459 | WARNING  | found no stored workdir sizes
[2022-08-22 15:22:24] 2022-08-22 13:21:34,460 | INFO     | will not add max space = 0 B to job metrics
[2022-08-22 15:22:24] 2022-08-22 13:21:34,460 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,461 | INFO     | payload/TRF did not report the number of read events
[2022-08-22 15:22:24] 2022-08-22 13:21:34,480 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | memory information not available: 'Max'
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | ..............................
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . Timing measurements:
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . get job = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . initial setup = 21 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . payload setup = 1 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . total setup = 22 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . stage-in = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . payload execution = 2 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | . stage-out = 0 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | ..............................
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2022-08-22 15:22:24] 2022-08-22 13:21:34,535 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-5515971838/pilotlog.txt
[2022-08-22 15:22:24] [end log extracts]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,542 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,542 | WARNING  | pilotErrorDiags = ["Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: comm
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | 
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | job summary report
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | --------------------------------------------------
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | PanDA job id: 5515971838
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | task id: NULL
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | error 1/2: 1305: Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system
[2022-08-22 15:22:24] /bin/bash: Sim_tf.py: command not found
[2022-08-22 15:22:24] 
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | pilot error code: 1187
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | pilot error diag: metadata does not exist: /home/boinc/slots/0/PanDA_Pilot-5515971838/metadata.xml
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | status: LOG_TRANSFER = DONE 
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | pilot state: failed 
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | transexitcode: 127
[2022-08-22 15:22:24] 2022-08-22 13:21:34,574 | INFO     | exeerrorcode: 0
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | exeerrordiag: 
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | exitcode: 0
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | exitmsg: 
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | cpuconsumptiontime: 3 s
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | nevents: 0
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | neventsw: 0
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | pid: 2681534
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | pgrp: 2681534
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | corecount: 4
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | event service: False
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | sizes: {0: 2650286, 1: 2650555, 11: 2650583, 7: 2655050, 8: 2659327, 9: 2659355, 125: 2659455}
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | --------------------------------------------------
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | 
[2022-08-22 15:22:24] 2022-08-22 13:21:34,575 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue jobs had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue payloads had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue data_in had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue data_out had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,587 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,588 | INFO     | queue completed_jobids has 1 job(s)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2022-08-22 15:22:24] 2022-08-22 13:21:34,588 | INFO     | job 5515971838 has completed (purged errors)
[2022-08-22 15:22:24] 2022-08-22 13:21:34,588 | INFO     | overall cleanup function is called
[2022-08-22 15:22:24] 2022-08-22 13:21:35,593 | INFO     | --- collectZombieJob: --- 10, [2681534]
[2022-08-22 15:22:24] 2022-08-22 13:21:35,594 | INFO     | zombie collector trying to kill pid 2681534
[2022-08-22 15:22:24] 2022-08-22 13:21:35,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-08-22 15:22:24] 2022-08-22 13:21:36,599 | INFO     | collected zombie processes
[2022-08-22 15:22:24] 2022-08-22 13:21:36,599 | INFO     | will now attempt to kill all subprocesses of pid=2681534
[2022-08-22 15:22:24] 2022-08-22 13:21:36,657 | INFO     | process IDs to be killed: [2681534] (in reverse order)
[2022-08-22 15:22:24] 2022-08-22 13:21:36,679 | WARNING  | found no corresponding commands to process id(s)
[2022-08-22 15:22:24] 2022-08-22 13:21:36,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2022-08-22 15:22:24] 2022-08-22 13:21:36,679 | INFO     | ready for new job
[2022-08-22 15:22:24] 2022-08-22 13:21:36,679 | INFO     | pilot has finished for previous job - re-establishing logging
[2022-08-22 15:22:24] 2022-08-22 13:21:36,679 | INFO     | ***************************************
[2022-08-22 15:22:24] 2022-08-22 13:21:36,679 | INFO     | ***  PanDA Pilot version 3.3.3 (1)  ***
[2022-08-22 15:22:24] 2022-08-22 13:21:36,680 | INFO     | ***************************************
[2022-08-22 15:22:24] 2022-08-22 13:21:36,680 | INFO     | 
[2022-08-22 15:22:24] 2022-08-22 13:21:36,703 | INFO     | architecture information:
[2022-08-22 15:22:24] 2022-08-22 13:21:36,738 | INFO     | 
[2022-08-22 15:22:24] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-08-22 15:22:24] Distributor ID:	CentOS
[2022-08-22 15:22:24] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-08-22 15:22:24] Release:	7.9.2009
[2022-08-22 15:22:24] Codename:	Core
[2022-08-22 15:22:24] 2022-08-22 13:21:36,738 | INFO     | ***************************************
[2022-08-22 15:22:24] 2022-08-22 13:21:37,239 | INFO     | executing command: df -mP /home/boinc/slots/0
[2022-08-22 15:22:24] 2022-08-22 13:21:37,249 | INFO     | sufficient remaining disk space (150530424832 B)
[2022-08-22 15:22:24] 2022-08-22 13:21:37,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2022-08-22 15:22:24] 2022-08-22 13:21:37,494 | INFO     | [payload] validate_pre thread has finished
[2022-08-22 15:22:24] 2022-08-22 13:21:37,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-08-22 15:22:24] 2022-08-22 13:21:37,611 | INFO     | [monitor] control thread has ended
[2022-08-22 15:22:24] 2022-08-22 13:21:37,931 | INFO     | [payload] validate_post thread has finished
[2022-08-22 15:22:24] 2022-08-22 13:21:38,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2022-08-22 15:22:24] 2022-08-22 13:21:38,543 | INFO     | [payload] execute_payloads thread has finished
[2022-08-22 15:22:24] 2022-08-22 13:21:38,691 | INFO     | [payload] failed_post thread has finished
[2022-08-22 15:22:24] 2022-08-22 13:21:39,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2022-08-22 15:22:24] 2022-08-22 13:21:52,979 | INFO     | [payload] run_realtimelog thread has finished
[2022-08-22 15:22:24] 2022-08-22 13:22:23,311 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
[2022-08-22 15:22:24] 2022-08-22 13:22:23,925 | INFO     | end of generic workflow (traces error code: 0)
[2022-08-22 15:22:24] 2022-08-22 13:22:23,926 | INFO     | traces error code: 0
[2022-08-22 15:22:24] 2022-08-22 13:22:23,926 | INFO     | pilot has finished
[2022-08-22 15:22:24] 2022-08-22 13:22:24,023 [wrapper] ==== pilot stdout END ====
[2022-08-22 15:22:24] 2022-08-22 13:22:24,034 [wrapper] ==== wrapper stdout RESUME ====
[2022-08-22 15:22:24] 2022-08-22 13:22:24,046 [wrapper] pilotpid: 2679953
[2022-08-22 15:22:24] 2022-08-22 13:22:24,058 [wrapper] Pilot exit status: 0
[2022-08-22 15:22:24] 2022-08-22 13:22:24,069 [wrapper] pandaids: 5515971838
[2022-08-22 15:22:24] 2022-08-22 13:22:24,073 [wrapper] apfmon messages muted
[2022-08-22 15:22:24] 2022-08-22 13:22:24,075 [wrapper] Test setup, not cleaning
[2022-08-22 15:22:24] 2022-08-22 13:22:24,077 [wrapper] ==== wrapper stdout END ====
[2022-08-22 15:22:24] 2022-08-22 13:22:24,078 [wrapper] ==== wrapper stderr END ====
[2022-08-22 15:22:24] 2022-08-22 13:22:24,082 [wrapper] wrapperexiting ec=0, duration=341
[2022-08-22 15:22:24] 2022-08-22 13:22:24,084 [wrapper] apfmon messages muted
[2022-08-22 15:22:24]  *** Error codes and diagnostics ***
[2022-08-22 15:22:24]     "exeErrorCode": 0,
[2022-08-22 15:22:24]     "exeErrorDiag": "",
[2022-08-22 15:22:24]     "pilotErrorCode": 1305,
[2022-08-22 15:22:24]     "pilotErrorDiag": "Failed to execute payload:mktemp: failed to create file via template '/tmp/asetup_XXXXXX.sh': Read-only file system\n/bin/bash: Sim_tf.py: command not found\n",
[2022-08-22 15:22:24]  *** Listing of results directory ***
[2022-08-22 15:22:24] total 40840
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc   358966 Aug 22 13:28 pilot3.tar.gz
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc     4534 Aug 22 14:03 queuedata.json
[2022-08-22 15:22:24] -rwx------ 1 boinc boinc    27162 Aug 22 14:04 runpilot2-wrapper.sh
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc      107 Aug 22 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2022-08-22 15:22:24] -rwxr-xr-x 1 boinc boinc     8176 Aug 22 15:16 run_atlas
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc      112 Aug 22 15:16 job.xml
[2022-08-22 15:22:24] -rw-r--r-- 2 boinc boinc    16697 Aug 22 15:16 start_atlas.sh
[2022-08-22 15:22:24] drwxrwx--x 2 boinc boinc     4096 Aug 22 15:16 shared
[2022-08-22 15:22:24] -rw-r--r-- 2 boinc boinc   369748 Aug 22 15:16 input.tar.gz
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc     6524 Aug 22 15:16 init_data.xml
[2022-08-22 15:22:24] -rw-r--r-- 2 boinc boinc 37960264 Aug 22 15:16 EVNT.04972714._000040.pool.root.1
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc        0 Aug 22 15:16 boinc_lockfile
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc     2802 Aug 22 15:16 pandaJob.out
[2022-08-22 15:22:24] -rw------- 1 boinc boinc  1015354 Aug 22 15:18 agis_schedconf.cvmfs.json
[2022-08-22 15:22:24] -rw------- 1 boinc boinc  1778034 Aug 22 15:19 agis_ddmendpoints.agis.ALL.json
[2022-08-22 15:22:24] drwx------ 4 boinc boinc     4096 Aug 22 15:19 pilot3
[2022-08-22 15:22:24] -rw------- 1 boinc boinc      279 Aug 22 15:19 memory_monitor_summary.json
[2022-08-22 15:22:24] -rw------- 1 boinc boinc     6435 Aug 22 15:19 8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log.tgz
[2022-08-22 15:22:24] -rw------- 1 boinc boinc     2277 Aug 22 15:21 heartbeat.json
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc      528 Aug 22 15:21 boinc_task_state.xml
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc     8192 Aug 22 15:22 boinc_mmap_file
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc       22 Aug 22 15:22 wrapper_checkpoint.txt
[2022-08-22 15:22:24] -rw------- 1 boinc boinc     1964 Aug 22 15:22 pilotlog.txt
[2022-08-22 15:22:24] -rw------- 1 boinc boinc    60379 Aug 22 15:22 8a6e718d-c92a-4ece-9644-0006492494102-1661169851_98767.1.job.log
[2022-08-22 15:22:24] -rw------- 1 boinc boinc      251 Aug 22 15:22 output.list
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc     9192 Aug 22 15:22 runtime_log.err
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc      722 Aug 22 15:22 runtime_log
[2022-08-22 15:22:24] -rw------- 1 boinc boinc    81920 Aug 22 15:22 result.tar.gz
[2022-08-22 15:22:24] -rw------- 1 boinc boinc      549 Aug 22 15:22 0bIKDmILLk1n7Olcko1bjSoqABFKDmABFKDmKFbSDmvyIKDmPVV0nm.diag
[2022-08-22 15:22:24] -rw-r--r-- 1 boinc boinc    22640 Aug 22 15:22 stderr.txt
[2022-08-22 15:22:24] No HITS result produced
[2022-08-22 15:22:24]  *** Contents of shared directory: ***
[2022-08-22 15:22:24] total 37536
[2022-08-22 15:22:24] -rw-r--r-- 2 boinc boinc    16697 Aug 22 15:16 start_atlas.sh
[2022-08-22 15:22:24] -rw-r--r-- 2 boinc boinc   369748 Aug 22 15:16 input.tar.gz
[2022-08-22 15:22:24] -rw-r--r-- 2 boinc boinc 37960264 Aug 22 15:16 ATLAS.root_0
[2022-08-22 15:22:24] -rw------- 1 boinc boinc    81920 Aug 22 15:22 result.tar.gz
15:22:25 (2669955): run_atlas exited; CPU time 7.844953
15:22:25 (2669955): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN