Name m3gKDmgZmn1n7Olcko1bjSoqABFKDmABFKDmKFbSDmACJKDmtpRb7m_0
Workunit 2206941
Created 31 Aug 2022, 23:45:22 UTC
Sent 31 Aug 2022, 23:48:16 UTC
Report deadline 7 Sep 2022, 23:48:16 UTC
Received 31 Aug 2022, 23:58:27 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4711
Run time 9 min 45 sec
CPU time 8 min 33 sec
Validate state Valid
Credit 14.94
Device peak FLOPS 11.02 GFLOPS
Application version ATLAS Simulation v1.25 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.40 GB
Peak swap size 2.13 GB
Peak disk usage 36.38 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:48:24 (2690): wrapper (7.7.26015): starting
01:48:24 (2690): wrapper: running run_atlas (--nthreads 2)
[2022-09-01 01:48:24] Arguments: --nthreads 2
[2022-09-01 01:48:24] Threads: 2
[2022-09-01 01:48:24] Checking for CVMFS
[2022-09-01 01:48:27] Probing /cvmfs/atlas.cern.ch... OK
[2022-09-01 01:48:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-09-01 01:48:28] Running cvmfs_config stat atlas.cern.ch
[2022-09-01 01:48:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-09-01 01:48:29] 2.9.4.0 2925 0 24692 108921 3 1 5546840 10240001 0 130560 0 0 100.000 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.86:3128 1
[2022-09-01 01:48:29] CVMFS is ok
[2022-09-01 01:48:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-09-01 01:48:29] Checking for apptainer binary...
[2022-09-01 01:48:29] Using apptainer found in PATH at /usr/bin/apptainer
[2022-09-01 01:48:29] Running /usr/bin/apptainer --version
[2022-09-01 01:48:29] apptainer version 1.1.0-rc.2
[2022-09-01 01:48:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-09-01 01:48:29] mannivl22
[2022-09-01 01:48:29] apptainer works
[2022-09-01 01:48:29] Set ATHENA_PROC_NUMBER=2
[2022-09-01 01:48:29] Starting ATLAS job with PandaID=5581466053
[2022-09-01 01:48:29] Try creating a directory in /tmp
[2022-09-01 01:48:29] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /tmp/tmp.XXXXX
[2022-09-01 01:48:29] /tmp/tmp.P9y2M
[2022-09-01 01:48:29] Try creating a directory in /var/tmp
[2022-09-01 01:48:29] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /var/tmp/tmp.XXXXX
[2022-09-01 01:48:29] /var/tmp/tmp.PlJC5
[2022-09-01 01:48:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-09-01 01:58:07]  *** The last 200 lines of the pilot log: ***
[2022-09-01 01:58:07]  dataset=hc_test.gangarbt.hc20248943.tid1184.BOINC-TEST.71
[2022-09-01 01:58:07]  ddm_activity=['write_lan', 'write_wan']
[2022-09-01 01:58:07]  ddmendpoint=NDGF-T1_DATADISK
[2022-09-01 01:58:07]  direct_access_lan=False
[2022-09-01 01:58:07]  direct_access_wan=False
[2022-09-01 01:58:07]  domain=
[2022-09-01 01:58:07]  filesize=1392703
[2022-09-01 01:58:07]  filetype=output
[2022-09-01 01:58:07]  guid=6BE07510-5EA4-4F44-9564-5C3103CCCABC
[2022-09-01 01:58:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-09-01 01:58:07]  is_tar=False
[2022-09-01 01:58:07]  lfn=output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root
[2022-09-01 01:58:07]  mtime=0
[2022-09-01 01:58:07]  protocol_id=None
[2022-09-01 01:58:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-09-01 01:58:07]  replicas=None
[2022-09-01 01:58:07]  scope=hc_test
[2022-09-01 01:58:07]  status=None
[2022-09-01 01:58:07]  status_code=0
[2022-09-01 01:58:07]  storage_token=
[2022-09-01 01:58:07]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root
[2022-09-01 01:58:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c1/6d/output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root
[2022-09-01 01:58:07]  workdir=None
[2022-09-01 01:58:07] ]
[2022-09-01 01:58:07] 2022-08-31 23:57:02,504 | INFO     | transferring file output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/output.1.950a3485-
[2022-09-01 01:58:07] 2022-08-31 23:57:02,504 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root /var/l
[2022-09-01 01:58:07] 2022-08-31 23:57:02,528 | INFO     | Adding to output.list: output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c1/6d/output.1.
[2022-09-01 01:58:07] 2022-08-31 23:57:02,529 | INFO     | executing command: ps aux -q 7905
[2022-09-01 01:58:07] 2022-08-31 23:57:02,559 | INFO     | summary of transferred files:
[2022-09-01 01:58:07] 2022-08-31 23:57:02,559 | INFO     |  -- lfn=output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root, status_code=0, status=transferred
[2022-09-01 01:58:07] 2022-08-31 23:57:02,560 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053
[2022-09-01 01:58:07] 2022-08-31 23:57:02,593 | WARNING  | failed to remove directory: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root_001 (2, No su
[2022-09-01 01:58:07] 2022-08-31 23:57:02,594 | WARNING  | failed to remove directory: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root_002 (2, No su
[2022-09-01 01:58:07] 2022-08-31 23:57:02,594 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053
[2022-09-01 01:58:07] 2022-08-31 23:57:02,619 | INFO     | will create archive /var/lib/boinc_data/boinc-01/slots/0/950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz
[2022-09-01 01:58:07] 2022-08-31 23:57:02,619 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc_data/boinc-01/slots/0/950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz tarball_PandaJob_5581466053_BOINC-TES
[2022-09-01 01:58:07] 2022-08-31 23:57:02,676 | INFO     | copied /var/lib/boinc_data/boinc-01/slots/0/950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz to /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053
[2022-09-01 01:58:07] 2022-08-31 23:57:02,676 | INFO     | prepare to stage-out 1 log file(s)
[2022-09-01 01:58:07] 2022-08-31 23:57:02,677 | INFO     | stage-out will not be done in a container
[2022-09-01 01:58:07] 2022-08-31 23:57:02,678 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2022-09-01 01:58:07] 2022-08-31 23:57:02,679 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2022-09-01 01:58:07] 2022-08-31 23:57:02,679 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2022-09-01 01:58:07] 2022-08-31 23:57:02,679 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2022-09-01 01:58:07] 2022-08-31 23:57:02,784 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2022-09-01 01:58:07] 2022-08-31 23:57:02,787 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2022-09-01 01:58:07]  activity=['pl', 'pw', 'w', 'default']
[2022-09-01 01:58:07]  allow_lan=True
[2022-09-01 01:58:07]  allow_wan=False
[2022-09-01 01:58:07]  checksum={'adler32': '7066e861'}
[2022-09-01 01:58:07]  dataset=hc_test.gangarbt.hc20248943.tid1184.BOINC-TEST.71
[2022-09-01 01:58:07]  ddm_activity=['write_lan', 'write_wan']
[2022-09-01 01:58:07]  ddmendpoint=NDGF-T1_DATADISK
[2022-09-01 01:58:07]  direct_access_lan=False
[2022-09-01 01:58:07]  direct_access_wan=False
[2022-09-01 01:58:07]  domain=
[2022-09-01 01:58:07]  filesize=425051
[2022-09-01 01:58:07]  filetype=log
[2022-09-01 01:58:07]  guid=4e929916-53f9-452b-9b26-761226370dec
[2022-09-01 01:58:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-09-01 01:58:07]  is_tar=False
[2022-09-01 01:58:07]  lfn=950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz
[2022-09-01 01:58:07]  mtime=0
[2022-09-01 01:58:07]  protocol_id=None
[2022-09-01 01:58:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-09-01 01:58:07]  replicas=None
[2022-09-01 01:58:07]  scope=hc_test
[2022-09-01 01:58:07]  status=None
[2022-09-01 01:58:07]  status_code=0
[2022-09-01 01:58:07]  storage_token=
[2022-09-01 01:58:07]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz
[2022-09-01 01:58:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/72/1f/950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz
[2022-09-01 01:58:07]  workdir=None
[2022-09-01 01:58:07] ]
[2022-09-01 01:58:07] 2022-08-31 23:57:02,829 | INFO     | transferring file 950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/950a3485-0b47-4fe2-b61f
[2022-09-01 01:58:07] 2022-08-31 23:57:02,829 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz /var/lib/bo
[2022-09-01 01:58:07] 2022-08-31 23:57:02,851 | INFO     | Adding to output.list: 950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/72/1f/950a3485-0b47-
[2022-09-01 01:58:07] 2022-08-31 23:57:02,852 | INFO     | executing command: ps aux -q 7905
[2022-09-01 01:58:07] 2022-08-31 23:57:02,881 | INFO     | summary of transferred files:
[2022-09-01 01:58:07] 2022-08-31 23:57:02,881 | INFO     |  -- lfn=950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz, status_code=0, status=transferred
[2022-09-01 01:58:07] 2022-08-31 23:57:02,881 | INFO     | stage-out finished correctly
[2022-09-01 01:58:07] 2022-08-31 23:57:03,736 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2022-09-01 01:58:07] 2022-08-31 23:57:05,229 | INFO     | monitor loop #6: job 0:5581466053 is in state 'finished'
[2022-09-01 01:58:07] 2022-08-31 23:57:05,229 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2022-09-01 01:58:07] 2022-08-31 23:57:05,883 | INFO     | job 5581466053 has state=finished
[2022-09-01 01:58:07] 2022-08-31 23:57:05,883 | INFO     | preparing for final server update for job 5581466053 in state='finished'
[2022-09-01 01:58:07] 2022-08-31 23:57:05,884 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pi
[2022-09-01 01:58:07] 2022-08-31 23:57:07,517 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2022-09-01 01:58:07] 2022-08-31 23:57:07,517 | INFO     | job 5581466053 has finished - writing final server update
[2022-09-01 01:58:07] 2022-08-31 23:57:07,518 | INFO     | will not add max space = -34005917 B to job metrics
[2022-09-01 01:58:07] 2022-08-31 23:57:07,518 | WARNING  | wrong length of table data, x=[1661990067.0], y=[1674301.0] (must be same and length>=4)
[2022-09-01 01:58:07] 2022-08-31 23:57:07,518 | INFO     | total number of processed events: 2 (read)
[2022-09-01 01:58:07] 2022-08-31 23:57:07,519 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-09-01 01:58:07] 2022-08-31 23:57:07,548 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-5581466053/memory_monitor_summary.json (trf name=prmon)
[2022-09-01 01:58:07] 2022-08-31 23:57:07,549 | INFO     | extracted standard info from prmon json
[2022-09-01 01:58:07] 2022-08-31 23:57:07,549 | INFO     | extracted standard memory fields from prmon json
[2022-09-01 01:58:07] 2022-08-31 23:57:07,549 | INFO     | ..............................
[2022-09-01 01:58:07] 2022-08-31 23:57:07,549 | INFO     | . Timing measurements:
[2022-09-01 01:58:07] 2022-08-31 23:57:07,549 | INFO     | . get job = 0 s
[2022-09-01 01:58:07] 2022-08-31 23:57:07,550 | INFO     | . initial setup = 1 s
[2022-09-01 01:58:07] 2022-08-31 23:57:07,550 | INFO     | . payload setup = 12 s
[2022-09-01 01:58:07] 2022-08-31 23:57:07,550 | INFO     | . total setup = 13 s
[2022-09-01 01:58:07] 2022-08-31 23:57:07,550 | INFO     | . stage-in = 0 s
[2022-09-01 01:58:07] 2022-08-31 23:57:07,550 | INFO     | . payload execution = 464 s
[2022-09-01 01:58:07] 2022-08-31 23:57:07,550 | INFO     | . stage-out = 0 s
[2022-09-01 01:58:07] 2022-08-31 23:57:07,550 | INFO     | ..............................
[2022-09-01 01:58:07] 2022-08-31 23:57:07,612 | INFO     | 
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | job summary report
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | --------------------------------------------------
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | PanDA job id: 5581466053
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | task id: NULL
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | errors: (none)
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | status: LOG_TRANSFER = DONE 
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | pilot state: finished 
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | transexitcode: 0
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | exeerrorcode: 0
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | exeerrordiag: 
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | exitcode: 0
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | exitmsg: OK
[2022-09-01 01:58:07] 2022-08-31 23:57:07,613 | INFO     | cpuconsumptiontime: 533 s
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | nevents: 2
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | neventsw: 0
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | pid: 11024
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | pgrp: 11024
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | corecount: 2
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | event service: False
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | sizes: {0: 2650584, 1: 2651052, 11: 2651052, 481: 2673792, 482: 2682846, 483: 2682902, 486: 2683932}
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | --------------------------------------------------
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | 
[2022-09-01 01:58:07] 2022-08-31 23:57:07,614 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue jobs had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue payloads had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue data_in had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue data_out had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,638 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,639 | INFO     | queue completed_jobids has 1 job(s)
[2022-09-01 01:58:07] 2022-08-31 23:57:07,639 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2022-09-01 01:58:07] 2022-08-31 23:57:07,639 | INFO     | job 5581466053 has completed (purged errors)
[2022-09-01 01:58:07] 2022-08-31 23:57:07,639 | INFO     | overall cleanup function is called
[2022-09-01 01:58:07] 2022-08-31 23:57:08,647 | INFO     | --- collectZombieJob: --- 10, [11024]
[2022-09-01 01:58:07] 2022-08-31 23:57:08,648 | INFO     | zombie collector trying to kill pid 11024
[2022-09-01 01:58:07] 2022-08-31 23:57:08,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-09-01 01:58:07] 2022-08-31 23:57:09,654 | INFO     | collected zombie processes
[2022-09-01 01:58:07] 2022-08-31 23:57:09,654 | INFO     | will now attempt to kill all subprocesses of pid=11024
[2022-09-01 01:58:07] 2022-08-31 23:57:09,707 | INFO     | process IDs to be killed: [11024] (in reverse order)
[2022-09-01 01:58:07] 2022-08-31 23:57:09,777 | WARNING  | found no corresponding commands to process id(s)
[2022-09-01 01:58:07] 2022-08-31 23:57:09,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2022-09-01 01:58:07] 2022-08-31 23:57:09,777 | INFO     | ready for new job
[2022-09-01 01:58:07] 2022-08-31 23:57:09,777 | INFO     | pilot has finished for previous job - re-establishing logging
[2022-09-01 01:58:07] 2022-08-31 23:57:09,778 | INFO     | ***************************************
[2022-09-01 01:58:07] 2022-08-31 23:57:09,779 | INFO     | ***  PanDA Pilot version 3.3.3 (1)  ***
[2022-09-01 01:58:07] 2022-08-31 23:57:09,779 | INFO     | ***************************************
[2022-09-01 01:58:07] 2022-08-31 23:57:09,779 | INFO     | 
[2022-09-01 01:58:07] 2022-08-31 23:57:09,779 | INFO     | pilot is running in a VM
[2022-09-01 01:58:07] 2022-08-31 23:57:09,779 | INFO     | architecture information:
[2022-09-01 01:58:07] 2022-08-31 23:57:09,923 | INFO     | 
[2022-09-01 01:58:07] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-09-01 01:58:07] Distributor ID:	CentOS
[2022-09-01 01:58:07] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-09-01 01:58:07] Release:	7.9.2009
[2022-09-01 01:58:07] Codename:	Core
[2022-09-01 01:58:07] 2022-08-31 23:57:09,923 | INFO     | ***************************************
[2022-09-01 01:58:07] 2022-08-31 23:57:10,443 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2022-09-01 01:58:07] 2022-08-31 23:57:10,460 | INFO     | sufficient remaining disk space (39765147648 B)
[2022-09-01 01:58:07] 2022-08-31 23:57:10,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2022-09-01 01:58:07] 2022-08-31 23:57:10,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-09-01 01:58:07] 2022-08-31 23:57:10,469 | INFO     | [monitor] control thread has ended
[2022-09-01 01:58:07] 2022-08-31 23:57:10,870 | INFO     | [payload] failed_post thread has finished
[2022-09-01 01:58:07] 2022-08-31 23:57:10,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2022-09-01 01:58:07] 2022-08-31 23:57:11,274 | INFO     | [payload] execute_payloads thread has finished
[2022-09-01 01:58:07] 2022-08-31 23:57:11,926 | INFO     | [payload] validate_post thread has finished
[2022-09-01 01:58:07] 2022-08-31 23:57:11,926 | INFO     | [payload] validate_pre thread has finished
[2022-09-01 01:58:07] 2022-08-31 23:57:12,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2022-09-01 01:58:07] 2022-08-31 23:57:21,191 | INFO     | [payload] run_realtimelog thread has finished
[2022-09-01 01:58:07] 2022-08-31 23:58:06,837 | WARNING  | no jobs in monitored_payloads queue (waited for 61 s)
[2022-09-01 01:58:07] 2022-08-31 23:58:07,052 | INFO     | end of generic workflow (traces error code: 0)
[2022-09-01 01:58:07] 2022-08-31 23:58:07,053 | INFO     | traces error code: 0
[2022-09-01 01:58:07] 2022-08-31 23:58:07,053 | INFO     | pilot has finished
[2022-09-01 01:58:07] 2022-08-31 23:58:07,104 [wrapper] ==== pilot stdout END ====
[2022-09-01 01:58:07] 2022-08-31 23:58:07,109 [wrapper] ==== wrapper stdout RESUME ====
[2022-09-01 01:58:07] 2022-08-31 23:58:07,114 [wrapper] pilotpid: 7905
[2022-09-01 01:58:07] 2022-08-31 23:58:07,119 [wrapper] Pilot exit status: 0
[2022-09-01 01:58:07] 2022-08-31 23:58:07,141 [wrapper] pandaids: 5581466053
[2022-09-01 01:58:07] 2022-08-31 23:58:07,151 [wrapper] apfmon messages muted
[2022-09-01 01:58:07] 2022-08-31 23:58:07,158 [wrapper] Test setup, not cleaning
[2022-09-01 01:58:07] 2022-08-31 23:58:07,164 [wrapper] ==== wrapper stdout END ====
[2022-09-01 01:58:07] 2022-08-31 23:58:07,169 [wrapper] ==== wrapper stderr END ====
[2022-09-01 01:58:07] 2022-08-31 23:58:07,179 [wrapper] wrapperexiting ec=0, duration=577
[2022-09-01 01:58:07] 2022-08-31 23:58:07,184 [wrapper] apfmon messages muted
[2022-09-01 01:58:07]  *** Error codes and diagnostics ***
[2022-09-01 01:58:07]     "exeErrorCode": 0,
[2022-09-01 01:58:07]     "exeErrorDiag": "",
[2022-09-01 01:58:07]     "pilotErrorCode": 0,
[2022-09-01 01:58:07]     "pilotErrorDiag": "",
[2022-09-01 01:58:07]  *** Listing of results directory ***
[2022-09-01 01:58:07] insgesamt 44224
[2022-09-01 01:58:07] -rw-r--r-- 1 yeti yeti   358966 Sep  1 01:32 pilot3.tar.gz
[2022-09-01 01:58:07] -rwx------ 1 yeti yeti    27114 Sep  1 01:45 runpilot2-wrapper.sh
[2022-09-01 01:58:07] -rw-r--r-- 1 yeti yeti     4534 Sep  1 01:45 queuedata.json
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti      107 Sep  1 01:48 wrapper_26015_x86_64-pc-linux-gnu
[2022-09-01 01:58:07] -rwxr-xr-x 1 yeti yeti     8273 Sep  1 01:48 run_atlas
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti      112 Sep  1 01:48 job.xml
[2022-09-01 01:58:07] -rw-r--r-- 2 yeti yeti    17236 Sep  1 01:48 start_atlas.sh
[2022-09-01 01:58:07] drwxrwx--x 2 yeti yeti     4096 Sep  1 01:48 shared
[2022-09-01 01:58:07] -rw-r--r-- 2 yeti yeti   369666 Sep  1 01:48 input.tar.gz
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti     6234 Sep  1 01:48 init_data.xml
[2022-09-01 01:58:07] -rw-r--r-- 2 yeti yeti 37738636 Sep  1 01:48 EVNT.04972714._000024.pool.root.1
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti        0 Sep  1 01:48 boinc_lockfile
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti     2741 Sep  1 01:48 pandaJob.out
[2022-09-01 01:58:07] -rw------- 1 yeti yeti      469 Sep  1 01:48 setup.sh.local
[2022-09-01 01:58:07] -rw------- 1 yeti yeti  1020050 Sep  1 01:48 agis_schedconf.cvmfs.json
[2022-09-01 01:58:07] -rw------- 1 yeti yeti  1778162 Sep  1 01:48 agis_ddmendpoints.agis.ALL.json
[2022-09-01 01:58:07] drwx------ 4 yeti yeti     4096 Sep  1 01:48 pilot3
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti      532 Sep  1 01:54 boinc_task_state.xml
[2022-09-01 01:58:07] -rw------- 1 yeti yeti  1392703 Sep  1 01:56 output.1.950a3485-0b47-4fe2-b61f-a1f374af9456_93067.pool.root
[2022-09-01 01:58:07] -rw------- 1 yeti yeti     1001 Sep  1 01:56 memory_monitor_summary.json
[2022-09-01 01:58:07] -rw------- 1 yeti yeti   425051 Sep  1 01:57 950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log.tgz
[2022-09-01 01:58:07] -rw------- 1 yeti yeti     7787 Sep  1 01:57 heartbeat.json
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti     8192 Sep  1 01:58 boinc_mmap_file
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti       24 Sep  1 01:58 wrapper_checkpoint.txt
[2022-09-01 01:58:07] -rw------- 1 yeti yeti     2042 Sep  1 01:58 pilotlog.txt
[2022-09-01 01:58:07] -rw------- 1 yeti yeti    77791 Sep  1 01:58 950a3485-0b47-4fe2-b61f-a1f374af9456_93067.1.job.log
[2022-09-01 01:58:07] -rw------- 1 yeti yeti      464 Sep  1 01:58 output.list
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti    10982 Sep  1 01:58 runtime_log.err
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti      748 Sep  1 01:58 runtime_log
[2022-09-01 01:58:07] -rw------- 1 yeti yeti  1914880 Sep  1 01:58 result.tar.gz
[2022-09-01 01:58:07] -rw------- 1 yeti yeti      551 Sep  1 01:58 m3gKDmgZmn1n7Olcko1bjSoqABFKDmABFKDmKFbSDmACJKDmtpRb7m.diag
[2022-09-01 01:58:07] -rw-rw-r-- 1 yeti yeti    21790 Sep  1 01:58 stderr.txt
[2022-09-01 01:58:07] HITS file was successfully produced:
[2022-09-01 01:58:07] -rw------- 1 yeti yeti 1392703 Sep  1 01:56 shared/HITS.pool.root.1
[2022-09-01 01:58:07]  *** Contents of shared directory: ***
[2022-09-01 01:58:07] insgesamt 40476
[2022-09-01 01:58:07] -rw-r--r-- 2 yeti yeti    17236 Sep  1 01:48 start_atlas.sh
[2022-09-01 01:58:07] -rw-r--r-- 2 yeti yeti   369666 Sep  1 01:48 input.tar.gz
[2022-09-01 01:58:07] -rw-r--r-- 2 yeti yeti 37738636 Sep  1 01:48 ATLAS.root_0
[2022-09-01 01:58:07] -rw------- 1 yeti yeti  1392703 Sep  1 01:56 HITS.pool.root.1
[2022-09-01 01:58:07] -rw------- 1 yeti yeti  1914880 Sep  1 01:58 result.tar.gz
01:58:08 (2690): run_atlas exited; CPU time 513.060524
01:58:08 (2690): called boinc_finish(0)

</stderr_txt>
]]>


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