| Name | ekXKDmYgN51n7Olcko1bjSoqABFKDmABFKDmFymXDmk2GKDms4c40n_1 |
| Workunit | 2220469 |
| Created | 19 Oct 2022, 14:20:56 UTC |
| Sent | 19 Oct 2022, 14:26:44 UTC |
| Report deadline | 26 Oct 2022, 14:26:44 UTC |
| Received | 19 Oct 2022, 15:07:17 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4704 |
| Run time | 5 min 57 sec |
| CPU time | 4 min 43 sec |
| Validate state | Valid |
| Credit | 1.43 |
| Device peak FLOPS | 9.78 GFLOPS |
| Application version | ATLAS Simulation v1.25 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.49 GB |
| Peak swap size | 2.13 GB |
| Peak disk usage | 73.17 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:59:41 (1764304): wrapper (7.7.26015): starting
16:59:41 (1764304): wrapper: running run_atlas (--nthreads 2)
[2022-10-19 16:59:41] Arguments: --nthreads 2
[2022-10-19 16:59:41] Threads: 2
[2022-10-19 16:59:41] Checking for CVMFS
[2022-10-19 16:59:41] Probing /cvmfs/atlas.cern.ch... OK
[2022-10-19 16:59:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-10-19 16:59:41] Running cvmfs_config stat atlas.cern.ch
[2022-10-19 16:59:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-10-19 16:59:42] 2.9.4.0 755507 7186 73436 111013 0 80 7509114 10240000 1562 130560 0 34188561 99.998 583515 1384 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.86:3128 1
[2022-10-19 16:59:42] CVMFS is ok
[2022-10-19 16:59:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-10-19 16:59:42] Checking for apptainer binary...
[2022-10-19 16:59:42] Using apptainer found in PATH at /usr/bin/apptainer
[2022-10-19 16:59:42] Running /usr/bin/apptainer --version
[2022-10-19 16:59:42] apptainer version 1.1.0-rc.2
[2022-10-19 16:59:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-10-19 16:59:42] atlas6l2
[2022-10-19 16:59:42] apptainer works
[2022-10-19 16:59:42] Set ATHENA_PROC_NUMBER=2
[2022-10-19 16:59:42] Starting ATLAS job with PandaID=5515971838
[2022-10-19 16:59:42] Try creating a directory in /tmp
[2022-10-19 16:59:42] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX
[2022-10-19 16:59:42] /tmp/tmp.qy16N
[2022-10-19 16:59:42] Try creating a directory in /var/tmp
[2022-10-19 16:59:42] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX
[2022-10-19 16:59:42] /var/tmp/tmp.3QujZ
[2022-10-19 16:59:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-10-19 17:05:34] *** The last 200 lines of the pilot log: ***
[2022-10-19 17:05:34] allow_wan=False
[2022-10-19 17:05:34] checksum={'adler32': 'b6afb49f'}
[2022-10-19 17:05:34] dataset=hc_test.gangarbt.hc20247452.tid1184.BOINC-TEST.23
[2022-10-19 17:05:34] ddm_activity=['write_lan', 'write_wan']
[2022-10-19 17:05:34] ddmendpoint=NDGF-T1_DATADISK
[2022-10-19 17:05:34] direct_access_lan=False
[2022-10-19 17:05:34] direct_access_wan=False
[2022-10-19 17:05:34] domain=
[2022-10-19 17:05:34] filesize=1362545
[2022-10-19 17:05:34] filetype=output
[2022-10-19 17:05:34] guid=5E3B1F21-601B-1C4D-A682-D5B395832A70
[2022-10-19 17:05:34] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-10-19 17:05:34] is_tar=False
[2022-10-19 17:05:34] lfn=output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root
[2022-10-19 17:05:34] mtime=0
[2022-10-19 17:05:34] protocol_id=None
[2022-10-19 17:05:34] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-10-19 17:05:34] replicas=None
[2022-10-19 17:05:34] scope=hc_test
[2022-10-19 17:05:34] status=None
[2022-10-19 17:05:34] status_code=0
[2022-10-19 17:05:34] storage_token=
[2022-10-19 17:05:34] surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root
[2022-10-19 17:05:34] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/cd/a0/output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root
[2022-10-19 17:05:34] workdir=None
[2022-10-19 17:05:34] ]
[2022-10-19 17:05:34] 2022-10-19 15:04:34,276 | INFO | transferring file output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/output.1
[2022-10-19 17:05:34] 2022-10-19 15:04:34,276 | INFO | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.r
[2022-10-19 17:05:34] 2022-10-19 15:04:34,300 | INFO | Adding to output.list: output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/cd/a0
[2022-10-19 17:05:34] 2022-10-19 15:04:34,302 | INFO | executing command: ps aux -q 1769759
[2022-10-19 17:05:34] 2022-10-19 15:04:34,341 | INFO | summary of transferred files:
[2022-10-19 17:05:34] 2022-10-19 15:04:34,341 | INFO | -- lfn=output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root, status_code=0, status=transferred
[2022-10-19 17:05:34] 2022-10-19 15:04:34,342 | INFO | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838
[2022-10-19 17:05:34] 2022-10-19 15:04:34,378 | WARNING | failed to remove directory: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root_002
[2022-10-19 17:05:34] 2022-10-19 15:04:34,378 | WARNING | failed to remove directory: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root_001
[2022-10-19 17:05:34] 2022-10-19 15:04:34,379 | INFO | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838
[2022-10-19 17:05:34] 2022-10-19 15:04:34,400 | INFO | will create archive /var/lib/boinc_data/boinc-01/slots/1/8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz
[2022-10-19 17:05:34] 2022-10-19 15:04:34,401 | INFO | executing command: pwd;tar cvfz /var/lib/boinc_data/boinc-01/slots/1/8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz tarball_PandaJob_5515971838
[2022-10-19 17:05:34] 2022-10-19 15:04:34,468 | INFO | copied /var/lib/boinc_data/boinc-01/slots/1/8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz to /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-
[2022-10-19 17:05:34] 2022-10-19 15:04:34,468 | INFO | prepare to stage-out 1 log file(s)
[2022-10-19 17:05:34] 2022-10-19 15:04:34,469 | INFO | stage-out will not be done in a container
[2022-10-19 17:05:34] 2022-10-19 15:04:34,471 | INFO | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2022-10-19 17:05:34] 2022-10-19 15:04:34,471 | INFO | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2022-10-19 17:05:34] 2022-10-19 15:04:34,471 | INFO | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2022-10-19 17:05:34] 2022-10-19 15:04:34,472 | INFO | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2022-10-19 17:05:34] 2022-10-19 15:04:34,563 | INFO | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2022-10-19 17:05:34] 2022-10-19 15:04:34,563 | INFO | ready to transfer (stage-out) files: [ accessmode=
[2022-10-19 17:05:34] activity=['pl', 'pw', 'w', 'default']
[2022-10-19 17:05:34] allow_lan=True
[2022-10-19 17:05:34] allow_wan=False
[2022-10-19 17:05:34] checksum={'adler32': '061d684e'}
[2022-10-19 17:05:34] dataset=hc_test.gangarbt.hc20247452.tid1184.BOINC-TEST.23
[2022-10-19 17:05:34] ddm_activity=['write_lan', 'write_wan']
[2022-10-19 17:05:34] ddmendpoint=NDGF-T1_DATADISK
[2022-10-19 17:05:34] direct_access_lan=False
[2022-10-19 17:05:34] direct_access_wan=False
[2022-10-19 17:05:34] domain=
[2022-10-19 17:05:34] filesize=424072
[2022-10-19 17:05:34] filetype=log
[2022-10-19 17:05:34] guid=e5faf5be-08d3-42e1-a1bb-2b7a1e3c51c3
[2022-10-19 17:05:34] inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-10-19 17:05:34] is_tar=False
[2022-10-19 17:05:34] lfn=8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz
[2022-10-19 17:05:34] mtime=0
[2022-10-19 17:05:34] protocol_id=None
[2022-10-19 17:05:34] protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-10-19 17:05:34] replicas=None
[2022-10-19 17:05:34] scope=hc_test
[2022-10-19 17:05:34] status=None
[2022-10-19 17:05:34] status_code=0
[2022-10-19 17:05:34] storage_token=
[2022-10-19 17:05:34] surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz
[2022-10-19 17:05:34] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/9e/7e/8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz
[2022-10-19 17:05:34] workdir=None
[2022-10-19 17:05:34] ]
[2022-10-19 17:05:34] 2022-10-19 15:04:34,597 | INFO | transferring file 8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/8a6e718d-c92a
[2022-10-19 17:05:34] 2022-10-19 15:04:34,598 | INFO | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz /
[2022-10-19 17:05:34] 2022-10-19 15:04:34,619 | INFO | Adding to output.list: 8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/9e/7e/8a6e
[2022-10-19 17:05:34] 2022-10-19 15:04:34,620 | INFO | executing command: ps aux -q 1769759
[2022-10-19 17:05:34] 2022-10-19 15:04:34,646 | INFO | summary of transferred files:
[2022-10-19 17:05:34] 2022-10-19 15:04:34,646 | INFO | -- lfn=8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz, status_code=0, status=transferred
[2022-10-19 17:05:34] 2022-10-19 15:04:34,647 | INFO | stage-out finished correctly
[2022-10-19 17:05:34] 2022-10-19 15:04:36,518 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue
[2022-10-19 17:05:34] 2022-10-19 15:04:37,982 | INFO | job 5515971838 has state=finished
[2022-10-19 17:05:34] 2022-10-19 15:04:37,982 | INFO | preparing for final server update for job 5515971838 in state='finished'
[2022-10-19 17:05:34] 2022-10-19 15:04:37,983 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2022-10-19 17:05:34] 2022-10-19 15:04:37,983 | INFO | job 5515971838 has finished - writing final server update
[2022-10-19 17:05:34] 2022-10-19 15:04:37,984 | INFO | will not add max space = -35870840 B to job metrics
[2022-10-19 17:05:34] 2022-10-19 15:04:37,985 | WARNING | wrong length of table data, x=[1666191618.0, 1666191679.0, 1666191740.0, 1666191801.0, 1666191862.0], y=[1800.0, 1116305.0, 1720457.0, 1640151.0, 704751.0] (must b
[2022-10-19 17:05:34] 2022-10-19 15:04:37,986 | INFO | total number of processed events: 2 (read)
[2022-10-19 17:05:34] 2022-10-19 15:04:37,987 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-10-19 17:05:34] 2022-10-19 15:04:38,026 | INFO | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-10-19 17:05:34] 2022-10-19 15:04:38,028 | INFO | extracted standard info from prmon json
[2022-10-19 17:05:34] 2022-10-19 15:04:38,029 | INFO | extracted standard memory fields from prmon json
[2022-10-19 17:05:34] 2022-10-19 15:04:38,029 | INFO | ..............................
[2022-10-19 17:05:34] 2022-10-19 15:04:38,029 | INFO | . Timing measurements:
[2022-10-19 17:05:34] 2022-10-19 15:04:38,029 | INFO | . get job = 0 s
[2022-10-19 17:05:34] 2022-10-19 15:04:38,029 | INFO | . initial setup = 1 s
[2022-10-19 17:05:34] 2022-10-19 15:04:38,029 | INFO | . payload setup = 7 s
[2022-10-19 17:05:34] 2022-10-19 15:04:38,030 | INFO | . total setup = 8 s
[2022-10-19 17:05:34] 2022-10-19 15:04:38,030 | INFO | . stage-in = 0 s
[2022-10-19 17:05:34] 2022-10-19 15:04:38,030 | INFO | . payload execution = 256 s
[2022-10-19 17:05:34] 2022-10-19 15:04:38,030 | INFO | . stage-out = 0 s
[2022-10-19 17:05:34] 2022-10-19 15:04:38,030 | INFO | ..............................
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO |
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | job summary report
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | --------------------------------------------------
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | PanDA job id: 5515971838
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | task id: NULL
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | errors: (none)
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | status: LOG_TRANSFER = DONE
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | pilot state: finished
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | transexitcode: 0
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | exeerrorcode: 0
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | exeerrordiag:
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | exitcode: 0
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | exitmsg: OK
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | cpuconsumptiontime: 298 s
[2022-10-19 17:05:34] 2022-10-19 15:04:38,076 | INFO | nevents: 2
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO | neventsw: 0
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO | pid: 1772898
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO | pgrp: 1772898
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO | corecount: 2
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO | event service: False
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO | sizes: {0: 2640324, 11: 2640324, 267: 2662422, 268: 2671540, 270: 2671596, 271: 2672498}
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO | --------------------------------------------------
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO |
[2022-10-19 17:05:34] 2022-10-19 15:04:38,077 | INFO | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2022-10-19 17:05:34] 2022-10-19 15:04:38,104 | INFO | queue jobs had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,104 | INFO | queue payloads had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,104 | INFO | queue data_in had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue data_out had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue current_data_in had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue validated_jobs had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue validated_payloads had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue finished_jobs had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue finished_payloads had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue finished_data_in had 1 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue finished_data_out had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue failed_jobs had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue failed_payloads had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue failed_data_in had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue failed_data_out had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue completed_jobs had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue completed_jobids has 1 job(s)
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | job 5515971838 has completed (purged errors)
[2022-10-19 17:05:34] 2022-10-19 15:04:38,105 | INFO | overall cleanup function is called
[2022-10-19 17:05:34] 2022-10-19 15:04:39,113 | INFO | --- collectZombieJob: --- 10, [1772898]
[2022-10-19 17:05:34] 2022-10-19 15:04:39,113 | INFO | zombie collector trying to kill pid 1772898
[2022-10-19 17:05:34] 2022-10-19 15:04:39,113 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-10-19 17:05:34] 2022-10-19 15:04:40,118 | INFO | collected zombie processes
[2022-10-19 17:05:34] 2022-10-19 15:04:40,119 | INFO | will now attempt to kill all subprocesses of pid=1772898
[2022-10-19 17:05:34] 2022-10-19 15:04:40,172 | INFO | process IDs to be killed: [1772898] (in reverse order)
[2022-10-19 17:05:34] 2022-10-19 15:04:40,226 | WARNING | found no corresponding commands to process id(s)
[2022-10-19 17:05:34] 2022-10-19 15:04:40,227 | INFO | Do not look for orphan processes in BOINC jobs
[2022-10-19 17:05:34] 2022-10-19 15:04:40,227 | INFO | ready for new job
[2022-10-19 17:05:34] 2022-10-19 15:04:40,227 | INFO | pilot has finished for previous job - re-establishing logging
[2022-10-19 17:05:34] 2022-10-19 15:04:40,229 | INFO | ***************************************
[2022-10-19 17:05:34] 2022-10-19 15:04:40,229 | INFO | *** PanDA Pilot version 3.3.3 (1) ***
[2022-10-19 17:05:34] 2022-10-19 15:04:40,229 | INFO | ***************************************
[2022-10-19 17:05:34] 2022-10-19 15:04:40,229 | INFO |
[2022-10-19 17:05:34] 2022-10-19 15:04:40,230 | INFO | pilot is running in a VM
[2022-10-19 17:05:34] 2022-10-19 15:04:40,230 | INFO | architecture information:
[2022-10-19 17:05:34] 2022-10-19 15:04:40,352 | INFO |
[2022-10-19 17:05:34] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2022-10-19 17:05:34] Distributor ID: CentOS
[2022-10-19 17:05:34] Description: CentOS Linux release 7.9.2009 (Core)
[2022-10-19 17:05:34] Release: 7.9.2009
[2022-10-19 17:05:34] Codename: Core
[2022-10-19 17:05:34] 2022-10-19 15:04:40,353 | INFO | ***************************************
[2022-10-19 17:05:34] 2022-10-19 15:04:40,856 | INFO | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2022-10-19 17:05:34] 2022-10-19 15:04:40,875 | INFO | sufficient remaining disk space (41689284608 B)
[2022-10-19 17:05:34] 2022-10-19 15:04:40,875 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2022-10-19 17:05:34] 2022-10-19 15:04:40,875 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2022-10-19 17:05:34] 2022-10-19 15:04:40,875 | WARNING | aborting monitor loop since graceful_stop has been set
[2022-10-19 17:05:34] 2022-10-19 15:04:40,876 | INFO | [monitor] control thread has ended
[2022-10-19 17:05:34] 2022-10-19 15:04:41,126 | INFO | [payload] validate_pre thread has finished
[2022-10-19 17:05:34] 2022-10-19 15:04:41,374 | INFO | [payload] validate_post thread has finished
[2022-10-19 17:05:34] 2022-10-19 15:04:41,756 | INFO | [payload] failed_post thread has finished
[2022-10-19 17:05:34] 2022-10-19 15:04:42,298 | INFO | [payload] execute_payloads thread has finished
[2022-10-19 17:05:34] 2022-10-19 15:04:42,581 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-10-19 17:05:34] 2022-10-19 15:04:43,087 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2022-10-19 17:05:34] 2022-10-19 15:04:50,893 | INFO | [payload] run_realtimelog thread has finished
[2022-10-19 17:05:34] 2022-10-19 15:05:33,973 | WARNING | no jobs in monitored_payloads queue (waited for 61 s)
[2022-10-19 17:05:34] 2022-10-19 15:05:34,691 | INFO | end of generic workflow (traces error code: 0)
[2022-10-19 17:05:34] 2022-10-19 15:05:34,692 | INFO | traces error code: 0
[2022-10-19 17:05:34] 2022-10-19 15:05:34,692 | INFO | pilot has finished
[2022-10-19 17:05:34] 2022-10-19 15:05:34,747 [wrapper] ==== pilot stdout END ====
[2022-10-19 17:05:34] 2022-10-19 15:05:34,752 [wrapper] ==== wrapper stdout RESUME ====
[2022-10-19 17:05:34] 2022-10-19 15:05:34,757 [wrapper] pilotpid: 1769759
[2022-10-19 17:05:34] 2022-10-19 15:05:34,762 [wrapper] Pilot exit status: 0
[2022-10-19 17:05:34] 2022-10-19 15:05:34,784 [wrapper] pandaids: 5515971838
[2022-10-19 17:05:34] 2022-10-19 15:05:34,795 [wrapper] apfmon messages muted
[2022-10-19 17:05:34] 2022-10-19 15:05:34,801 [wrapper] Test setup, not cleaning
[2022-10-19 17:05:34] 2022-10-19 15:05:34,806 [wrapper] ==== wrapper stdout END ====
[2022-10-19 17:05:34] 2022-10-19 15:05:34,811 [wrapper] ==== wrapper stderr END ====
[2022-10-19 17:05:34] 2022-10-19 15:05:34,831 [wrapper] wrapperexiting ec=0, duration=352
[2022-10-19 17:05:34] 2022-10-19 15:05:34,836 [wrapper] apfmon messages muted
[2022-10-19 17:05:34] *** Error codes and diagnostics ***
[2022-10-19 17:05:34] "exeErrorCode": 0,
[2022-10-19 17:05:34] "exeErrorDiag": "",
[2022-10-19 17:05:34] "pilotErrorCode": 0,
[2022-10-19 17:05:34] "pilotErrorDiag": "",
[2022-10-19 17:05:34] *** Listing of results directory ***
[2022-10-19 17:05:34] insgesamt 44376
[2022-10-19 17:05:34] -rw-r--r-- 1 yeti yeti 358966 Okt 19 14:31 pilot3.tar.gz
[2022-10-19 17:05:34] -rw-r--r-- 1 yeti yeti 4540 Okt 19 14:45 queuedata.json
[2022-10-19 17:05:34] -rwx------ 1 yeti yeti 26318 Okt 19 14:49 runpilot2-wrapper.sh
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 107 Okt 19 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2022-10-19 17:05:34] -rwxr-xr-x 1 yeti yeti 8273 Okt 19 16:59 run_atlas
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 112 Okt 19 16:59 job.xml
[2022-10-19 17:05:34] -rw-r--r-- 2 yeti yeti 17919 Okt 19 16:59 start_atlas.sh
[2022-10-19 17:05:34] drwxrwx--x 2 yeti yeti 4096 Okt 19 16:59 shared
[2022-10-19 17:05:34] -rw-r--r-- 2 yeti yeti 369570 Okt 19 16:59 input.tar.gz
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 6461 Okt 19 16:59 init_data.xml
[2022-10-19 17:05:34] -rw-r--r-- 2 yeti yeti 37960264 Okt 19 16:59 EVNT.04972714._000040.pool.root.1
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 0 Okt 19 16:59 boinc_lockfile
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 2792 Okt 19 16:59 pandaJob.out
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 469 Okt 19 16:59 setup.sh.local
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 1040782 Okt 19 16:59 agis_schedconf.cvmfs.json
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 1769666 Okt 19 16:59 agis_ddmendpoints.agis.ALL.json
[2022-10-19 17:05:34] drwx------ 4 yeti yeti 4096 Okt 19 16:59 pilot3
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 532 Okt 19 17:03 boinc_task_state.xml
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 1362545 Okt 19 17:04 output.1.8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.pool.root
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 1014 Okt 19 17:04 memory_monitor_summary.json
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 424072 Okt 19 17:04 8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log.tgz
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 7824 Okt 19 17:04 heartbeat.json
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 8192 Okt 19 17:05 boinc_mmap_file
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 24 Okt 19 17:05 wrapper_checkpoint.txt
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 2134 Okt 19 17:05 pilotlog.txt
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 70546 Okt 19 17:05 8a6e718d-c92a-4ece-9644-00064981197-1666183744_98767.1.job.log
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 504 Okt 19 17:05 output.list
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 788 Okt 19 17:05 runtime_log
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 1873920 Okt 19 17:05 result.tar.gz
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 11694 Okt 19 17:05 runtime_log.err
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 624 Okt 19 17:05 ekXKDmYgN51n7Olcko1bjSoqABFKDmABFKDmFymXDmk2GKDms4c40n.diag
[2022-10-19 17:05:34] -rw-rw-r-- 1 yeti yeti 21721 Okt 19 17:05 stderr.txt
[2022-10-19 17:05:34] HITS file was successfully produced:
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 1362545 Okt 19 17:04 shared/HITS.pool.root.1
[2022-10-19 17:05:34] *** Contents of shared directory: ***
[2022-10-19 17:05:34] insgesamt 40620
[2022-10-19 17:05:34] -rw-r--r-- 2 yeti yeti 17919 Okt 19 16:59 start_atlas.sh
[2022-10-19 17:05:34] -rw-r--r-- 2 yeti yeti 369570 Okt 19 16:59 input.tar.gz
[2022-10-19 17:05:34] -rw-r--r-- 2 yeti yeti 37960264 Okt 19 16:59 ATLAS.root_0
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 1362545 Okt 19 17:04 HITS.pool.root.1
[2022-10-19 17:05:34] -rw------- 1 yeti yeti 1873920 Okt 19 17:05 result.tar.gz
17:05:36 (1764304): run_atlas exited; CPU time 283.534377
17:05:36 (1764304): called boinc_finish(0)
</stderr_txt>
]]>
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