Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:30:01 (704166): wrapper (7.7.26015): starting
21:30:01 (704166): wrapper: running run_atlas (--nthreads 2)
[2022-11-10 21:30:02] Arguments: --nthreads 2
[2022-11-10 21:30:02] Threads: 2
[2022-11-10 21:30:02] Checking for CVMFS
[2022-11-10 21:30:02] Probing /cvmfs/atlas.cern.ch... OK
[2022-11-10 21:30:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-11-10 21:30:02] Running cvmfs_config stat atlas.cern.ch
[2022-11-10 21:30:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-11-10 21:30:02] 2.9.4.0 1406539 32186 108236 111939 3 80 5603552 10240000 2240 130560 0 280320052 99.999 2557686 827 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.86:3128 1
[2022-11-10 21:30:02] CVMFS is ok
[2022-11-10 21:30:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-11-10 21:30:02] Checking for apptainer binary...
[2022-11-10 21:30:02] Using apptainer found in PATH at /usr/bin/apptainer
[2022-11-10 21:30:02] Running /usr/bin/apptainer --version
[2022-11-10 21:30:02] apptainer version 1.1.0-rc.2
[2022-11-10 21:30:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-11-10 21:30:02] ellievl
[2022-11-10 21:30:02] apptainer works
[2022-11-10 21:30:02] Set ATHENA_PROC_NUMBER=2
[2022-11-10 21:30:02] Starting ATLAS job with PandaID=5515971838
[2022-11-10 21:30:02] Try creating a directory in /tmp
[2022-11-10 21:30:02] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /tmp/tmp.XXXXX
[2022-11-10 21:30:02] /tmp/tmp.zdFFD
[2022-11-10 21:30:02] Try creating a directory in /var/tmp
[2022-11-10 21:30:02] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /var/tmp/tmp.XXXXX
[2022-11-10 21:30:02] /var/tmp/tmp.EPaZe
[2022-11-10 21:30:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-11-10 21:36:30]  *** The last 200 lines of the pilot log: ***
[2022-11-10 21:36:30]  is_tar=False
[2022-11-10 21:36:30]  lfn=output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root
[2022-11-10 21:36:30]  mtime=0
[2022-11-10 21:36:30]  protocol_id=None
[2022-11-10 21:36:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-11-10 21:36:30]  replicas=None
[2022-11-10 21:36:30]  scope=hc_test
[2022-11-10 21:36:30]  status=None
[2022-11-10 21:36:30]  status_code=0
[2022-11-10 21:36:30]  storage_token=
[2022-11-10 21:36:30]  surl=/var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root
[2022-11-10 21:36:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e4/7e/output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root
[2022-11-10 21:36:30]  workdir=None
[2022-11-10 21:36:30] ]
[2022-11-10 21:36:30] 2022-11-10 20:36:10,114 | INFO     | transferring file output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root from /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/output.1
[2022-11-10 21:36:30] 2022-11-10 20:36:10,114 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.r
[2022-11-10 21:36:30] 2022-11-10 20:36:10,168 | INFO     | Adding to output.list: output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e4/7e
[2022-11-10 21:36:30] 2022-11-10 20:36:10,169 | INFO     | executing command: ps aux -q 709459
[2022-11-10 21:36:30] 2022-11-10 20:36:10,218 | INFO     | summary of transferred files:
[2022-11-10 21:36:30] 2022-11-10 20:36:10,218 | INFO     |  -- lfn=output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root, status_code=0, status=transferred
[2022-11-10 21:36:30] 2022-11-10 20:36:10,218 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838
[2022-11-10 21:36:30] 2022-11-10 20:36:10,277 | WARNING  | failed to remove directory: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root_001
[2022-11-10 21:36:30] 2022-11-10 20:36:10,277 | WARNING  | failed to remove directory: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root_002
[2022-11-10 21:36:30] 2022-11-10 20:36:10,278 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838
[2022-11-10 21:36:30] 2022-11-10 20:36:10,319 | INFO     | will create archive /var/lib/boinc_data/boinc-01/slots/3/8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz
[2022-11-10 21:36:30] 2022-11-10 20:36:10,319 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc_data/boinc-01/slots/3/8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz tarball_PandaJob_5515971838
[2022-11-10 21:36:30] 2022-11-10 20:36:10,417 | INFO     | copied /var/lib/boinc_data/boinc-01/slots/3/8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz to /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-
[2022-11-10 21:36:30] 2022-11-10 20:36:10,417 | INFO     | prepare to stage-out 1 log file(s)
[2022-11-10 21:36:30] 2022-11-10 20:36:10,417 | INFO     | stage-out will not be done in a container
[2022-11-10 21:36:30] 2022-11-10 20:36:10,419 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2022-11-10 21:36:30] 2022-11-10 20:36:10,419 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2022-11-10 21:36:30] 2022-11-10 20:36:10,419 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2022-11-10 21:36:30] 2022-11-10 20:36:10,419 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2022-11-10 21:36:30] 2022-11-10 20:36:10,499 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2022-11-10 21:36:30] 2022-11-10 20:36:10,499 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2022-11-10 21:36:30]  activity=['pl', 'pw', 'w', 'default']
[2022-11-10 21:36:30]  allow_lan=True
[2022-11-10 21:36:30]  allow_wan=False
[2022-11-10 21:36:30]  checkinputsize=True
[2022-11-10 21:36:30]  checksum={'adler32': '1fcb1bda'}
[2022-11-10 21:36:30]  dataset=hc_test.gangarbt.hc20247452.tid1184.BOINC-TEST.23
[2022-11-10 21:36:30]  ddm_activity=['write_lan', 'write_wan']
[2022-11-10 21:36:30]  ddmendpoint=NDGF-T1_DATADISK
[2022-11-10 21:36:30]  direct_access_lan=False
[2022-11-10 21:36:30]  direct_access_wan=False
[2022-11-10 21:36:30]  domain=
[2022-11-10 21:36:30]  filesize=423691
[2022-11-10 21:36:30]  filetype=log
[2022-11-10 21:36:30]  guid=e5faf5be-08d3-42e1-a1bb-2b7a1e3c51c3
[2022-11-10 21:36:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-11-10 21:36:30]  is_tar=False
[2022-11-10 21:36:30]  lfn=8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz
[2022-11-10 21:36:30]  mtime=0
[2022-11-10 21:36:30]  protocol_id=None
[2022-11-10 21:36:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-11-10 21:36:30]  replicas=None
[2022-11-10 21:36:30]  scope=hc_test
[2022-11-10 21:36:30]  status=None
[2022-11-10 21:36:30]  status_code=0
[2022-11-10 21:36:30]  storage_token=
[2022-11-10 21:36:30]  surl=/var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz
[2022-11-10 21:36:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/56/63/8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz
[2022-11-10 21:36:30]  workdir=None
[2022-11-10 21:36:30] ]
[2022-11-10 21:36:30] 2022-11-10 20:36:10,529 | INFO     | transferring file 8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz from /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/8a6e718d-c92a
[2022-11-10 21:36:30] 2022-11-10 20:36:10,529 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz /
[2022-11-10 21:36:30] 2022-11-10 20:36:10,578 | INFO     | Adding to output.list: 8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/56/63/8a6e
[2022-11-10 21:36:30] 2022-11-10 20:36:10,579 | INFO     | executing command: ps aux -q 709459
[2022-11-10 21:36:30] 2022-11-10 20:36:10,628 | INFO     | summary of transferred files:
[2022-11-10 21:36:30] 2022-11-10 20:36:10,628 | INFO     |  -- lfn=8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz, status_code=0, status=transferred
[2022-11-10 21:36:30] 2022-11-10 20:36:10,629 | INFO     | stage-out finished correctly
[2022-11-10 21:36:30] 2022-11-10 20:36:12,954 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2022-11-10 21:36:30] 2022-11-10 20:36:15,946 | INFO     | job 5515971838 has state=finished
[2022-11-10 21:36:30] 2022-11-10 20:36:15,947 | INFO     | preparing for final server update for job 5515971838 in state='finished'
[2022-11-10 21:36:30] 2022-11-10 20:36:15,947 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2022-11-10 21:36:30] 2022-11-10 20:36:15,947 | INFO     | job 5515971838 has finished - writing final server update
[2022-11-10 21:36:30] 2022-11-10 20:36:15,947 | WARNING  | wrong length of table data, x=[1668112273.0, 1668112334.0, 1668112395.0, 1668112456.0, 1668112517.0], y=[1719.0, 641801.0, 1382367.0, 1721449.0, 479755.0] (must be
[2022-11-10 21:36:30] 2022-11-10 20:36:15,948 | INFO     | total number of processed events: 2 (read)
[2022-11-10 21:36:30] 2022-11-10 20:36:15,948 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-11-10 21:36:30] 2022-11-10 20:36:15,997 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/3/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-11-10 21:36:30] 2022-11-10 20:36:15,998 | INFO     | extracted standard info from prmon json
[2022-11-10 21:36:30] 2022-11-10 20:36:15,998 | INFO     | extracted standard memory fields from prmon json
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | ..............................
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | . Timing measurements:
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | . get job = 0 s
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | . initial setup = 1 s
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | . payload setup = 17 s
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | . stage-in = 0 s
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | . payload execution = 308 s
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | . stage-out = 0 s
[2022-11-10 21:36:30] 2022-11-10 20:36:15,999 | INFO     | ..............................
[2022-11-10 21:36:30] 2022-11-10 20:36:16,047 | INFO     | 
[2022-11-10 21:36:30] 2022-11-10 20:36:16,048 | INFO     | job summary report
[2022-11-10 21:36:30] 2022-11-10 20:36:16,048 | INFO     | --------------------------------------------------
[2022-11-10 21:36:30] 2022-11-10 20:36:16,048 | INFO     | PanDA job id: 5515971838
[2022-11-10 21:36:30] 2022-11-10 20:36:16,049 | INFO     | task id: NULL
[2022-11-10 21:36:30] 2022-11-10 20:36:16,049 | INFO     | errors: (none)
[2022-11-10 21:36:30] 2022-11-10 20:36:16,049 | INFO     | status: LOG_TRANSFER = DONE 
[2022-11-10 21:36:30] 2022-11-10 20:36:16,049 | INFO     | pilot state: finished 
[2022-11-10 21:36:30] 2022-11-10 20:36:16,049 | INFO     | transexitcode: 0
[2022-11-10 21:36:30] 2022-11-10 20:36:16,049 | INFO     | exeerrorcode: 0
[2022-11-10 21:36:30] 2022-11-10 20:36:16,049 | INFO     | exeerrordiag: 
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | exitcode: 0
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | exitmsg: OK
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | cpuconsumptiontime: 363 s
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | nevents: 2
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | neventsw: 0
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | pid: 712563
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | pgrp: 712563
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | corecount: 2
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | event service: False
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | sizes: {0: 2571041, 1: 2572117, 11: 2572117, 326: 2594592, 327: 2603710, 329: 2603766, 332: 2604796}
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | --------------------------------------------------
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | 
[2022-11-10 21:36:30] 2022-11-10 20:36:16,050 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/3
[2022-11-10 21:36:30] 2022-11-10 20:36:16,098 | INFO     | queue jobs had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,098 | INFO     | queue payloads had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,098 | INFO     | queue data_in had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,098 | INFO     | queue data_out had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue completed_jobids has 1 job(s)
[2022-11-10 21:36:30] 2022-11-10 20:36:16,099 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,100 | INFO     | queue messages had 0 job(s) [purged]
[2022-11-10 21:36:30] 2022-11-10 20:36:16,100 | INFO     | job 5515971838 has completed (purged errors)
[2022-11-10 21:36:30] 2022-11-10 20:36:16,100 | INFO     | overall cleanup function is called
[2022-11-10 21:36:30] 2022-11-10 20:36:17,106 | INFO     | --- collectZombieJob: --- 10, [712563]
[2022-11-10 21:36:30] 2022-11-10 20:36:17,107 | INFO     | zombie collector trying to kill pid 712563
[2022-11-10 21:36:30] 2022-11-10 20:36:17,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-11-10 21:36:30] 2022-11-10 20:36:18,110 | INFO     | collected zombie processes
[2022-11-10 21:36:30] 2022-11-10 20:36:18,110 | INFO     | will now attempt to kill all subprocesses of pid=712563
[2022-11-10 21:36:30] 2022-11-10 20:36:18,200 | INFO     | process IDs to be killed: [712563] (in reverse order)
[2022-11-10 21:36:30] 2022-11-10 20:36:18,296 | WARNING  | found no corresponding commands to process id(s)
[2022-11-10 21:36:30] 2022-11-10 20:36:18,296 | INFO     | Do not look for orphan processes in BOINC jobs
[2022-11-10 21:36:30] 2022-11-10 20:36:18,296 | INFO     | ready for new job
[2022-11-10 21:36:30] 2022-11-10 20:36:18,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2022-11-10 21:36:30] 2022-11-10 20:36:18,297 | INFO     | *****************************************
[2022-11-10 21:36:30] 2022-11-10 20:36:18,297 | INFO     | ***  PanDA Pilot version 3.4.0 (118)  ***
[2022-11-10 21:36:30] 2022-11-10 20:36:18,297 | INFO     | *****************************************
[2022-11-10 21:36:30] 2022-11-10 20:36:18,297 | INFO     | 
[2022-11-10 21:36:30] 2022-11-10 20:36:18,298 | INFO     | pilot is running in a VM
[2022-11-10 21:36:30] 2022-11-10 20:36:18,298 | INFO     | architecture information:
[2022-11-10 21:36:30] 2022-11-10 20:36:18,568 | INFO     | 
[2022-11-10 21:36:30] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-11-10 21:36:30] Distributor ID:	CentOS
[2022-11-10 21:36:30] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-11-10 21:36:30] Release:	7.9.2009
[2022-11-10 21:36:30] Codename:	Core
[2022-11-10 21:36:30] 2022-11-10 20:36:18,569 | INFO     | *****************************************
[2022-11-10 21:36:30] 2022-11-10 20:36:19,072 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/3
[2022-11-10 21:36:30] 2022-11-10 20:36:19,103 | INFO     | sufficient remaining disk space (39733690368 B)
[2022-11-10 21:36:30] 2022-11-10 20:36:19,104 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2022-11-10 21:36:30] 2022-11-10 20:36:19,104 | INFO     | [job] retrieve thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:19,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-11-10 21:36:30] 2022-11-10 20:36:19,104 | WARNING  | aborting monitor loop since graceful_stop has been set
[2022-11-10 21:36:30] 2022-11-10 20:36:19,104 | INFO     | [monitor] control thread has ended
[2022-11-10 21:36:30] 2022-11-10 20:36:19,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2022-11-10 21:36:30] 2022-11-10 20:36:19,138 | INFO     | [job] create_data_payload thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:19,191 | INFO     | [payload] validate_pre thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:19,258 | INFO     | [job] validate thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:19,270 | INFO     | [data] control thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:19,506 | INFO     | [data] copytool_in thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:19,647 | INFO     | [payload] validate_post thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:20,106 | INFO     | [data] copytool_out thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:20,139 | INFO     | [payload] execute_payloads thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:20,201 | INFO     | [payload] control thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:20,349 | INFO     | [job] control thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:20,665 | INFO     | [payload] failed_post thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:21,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2022-11-10 21:36:30] 2022-11-10 20:36:21,062 | INFO     | [job] queue monitor thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:22,106 | INFO     | [data] queue_monitor thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:23,164 | WARNING  | no jobs in monitored_payloads queue (waited for 73 s)
[2022-11-10 21:36:30] 2022-11-10 20:36:23,164 | INFO     | [job] job monitor thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:29,788 | INFO     | job.realtimelogging is not enabled
[2022-11-10 21:36:30] 2022-11-10 20:36:29,788 | INFO     | [payload] run_realtimelog thread has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:30,297 | INFO     | end of generic workflow (traces error code: 0)
[2022-11-10 21:36:30] 2022-11-10 20:36:30,297 | INFO     | traces error code: 0
[2022-11-10 21:36:30] 2022-11-10 20:36:30,297 | INFO     | pilot has finished
[2022-11-10 21:36:30] 2022-11-10 20:36:30,348 [wrapper] ==== pilot stdout END ====
[2022-11-10 21:36:30] 2022-11-10 20:36:30,360 [wrapper] ==== wrapper stdout RESUME ====
[2022-11-10 21:36:30] 2022-11-10 20:36:30,371 [wrapper] pilotpid: 709459
[2022-11-10 21:36:30] 2022-11-10 20:36:30,388 [wrapper] Pilot exit status: 0
[2022-11-10 21:36:30] 2022-11-10 20:36:30,443 [wrapper] pandaids: 5515971838
[2022-11-10 21:36:30] 2022-11-10 20:36:30,470 [wrapper] apfmon messages muted
[2022-11-10 21:36:30] 2022-11-10 20:36:30,484 [wrapper] Test setup, not cleaning
[2022-11-10 21:36:30] 2022-11-10 20:36:30,499 [wrapper] ==== wrapper stdout END ====
[2022-11-10 21:36:30] 2022-11-10 20:36:30,517 [wrapper] ==== wrapper stderr END ====
[2022-11-10 21:36:30] 2022-11-10 20:36:30,545 [wrapper] wrapperexiting ec=0, duration=388
[2022-11-10 21:36:30] 2022-11-10 20:36:30,560 [wrapper] apfmon messages muted
[2022-11-10 21:36:30]  *** Error codes and diagnostics ***
[2022-11-10 21:36:30]     "exeErrorCode": 0,
[2022-11-10 21:36:30]     "exeErrorDiag": "",
[2022-11-10 21:36:30]     "pilotErrorCode": 0,
[2022-11-10 21:36:30]     "pilotErrorDiag": "",
[2022-11-10 21:36:30]  *** Listing of results directory ***
[2022-11-10 21:36:30] insgesamt 44356
[2022-11-10 21:36:30] -rw-r--r-- 1 yeti yeti   379728 Nov 10 12:24 pilot3.tar.gz
[2022-11-10 21:36:30] -rw-r--r-- 1 yeti yeti     4540 Nov 10 12:56 queuedata.json
[2022-11-10 21:36:30] -rwx------ 1 yeti yeti    26318 Nov 10 12:59 runpilot2-wrapper.sh
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti      107 Nov 10 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2022-11-10 21:36:30] -rwxr-xr-x 1 yeti yeti     8273 Nov 10 21:30 run_atlas
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti      112 Nov 10 21:30 job.xml
[2022-11-10 21:36:30] -rw-r--r-- 2 yeti yeti    17905 Nov 10 21:30 start_atlas.sh
[2022-11-10 21:36:30] drwxrwx--x 2 yeti yeti     4096 Nov 10 21:30 shared
[2022-11-10 21:36:30] -rw-r--r-- 2 yeti yeti   391207 Nov 10 21:30 input.tar.gz
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti     6499 Nov 10 21:30 init_data.xml
[2022-11-10 21:36:30] -rw-r--r-- 2 yeti yeti 37960264 Nov 10 21:30 EVNT.04972714._000040.pool.root.1
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti        0 Nov 10 21:30 boinc_lockfile
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti     2792 Nov 10 21:30 pandaJob.out
[2022-11-10 21:36:30] -rw------- 1 yeti yeti      469 Nov 10 21:30 setup.sh.local
[2022-11-10 21:36:30] -rw------- 1 yeti yeti  1028528 Nov 10 21:30 agis_schedconf.cvmfs.json
[2022-11-10 21:36:30] -rw------- 1 yeti yeti  1728450 Nov 10 21:30 agis_ddmendpoints.agis.ALL.json
[2022-11-10 21:36:30] drwx------ 4 yeti yeti     4096 Nov 10 21:30 pilot3
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti      532 Nov 10 21:34 boinc_task_state.xml
[2022-11-10 21:36:30] -rw------- 1 yeti yeti  1352762 Nov 10 21:36 output.1.8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.pool.root
[2022-11-10 21:36:30] -rw------- 1 yeti yeti      997 Nov 10 21:36 memory_monitor_summary.json
[2022-11-10 21:36:30] -rw------- 1 yeti yeti   423691 Nov 10 21:36 8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log.tgz
[2022-11-10 21:36:30] -rw------- 1 yeti yeti     7862 Nov 10 21:36 heartbeat.json
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti       24 Nov 10 21:36 wrapper_checkpoint.txt
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti     8192 Nov 10 21:36 boinc_mmap_file
[2022-11-10 21:36:30] -rw------- 1 yeti yeti     3042 Nov 10 21:36 pilotlog.txt
[2022-11-10 21:36:30] -rw------- 1 yeti yeti    74258 Nov 10 21:36 8a6e718d-c92a-4ece-9644-00064915919-1668081565_98767.1.job.log
[2022-11-10 21:36:30] -rw------- 1 yeti yeti      504 Nov 10 21:36 output.list
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti      788 Nov 10 21:36 runtime_log
[2022-11-10 21:36:30] -rw------- 1 yeti yeti  1873920 Nov 10 21:36 result.tar.gz
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti    11658 Nov 10 21:36 runtime_log.err
[2022-11-10 21:36:30] -rw------- 1 yeti yeti      622 Nov 10 21:36 AU8KDmYOLD2n7Olcko1bjSoqABFKDmABFKDmFymXDmeMMKDmYlMsDn.diag
[2022-11-10 21:36:30] -rw-rw-r-- 1 yeti yeti    22212 Nov 10 21:36 stderr.txt
[2022-11-10 21:36:30] HITS file was successfully produced:
[2022-11-10 21:36:30] -rw------- 1 yeti yeti 1352762 Nov 10 21:36 shared/HITS.pool.root.1
[2022-11-10 21:36:30]  *** Contents of shared directory: ***
[2022-11-10 21:36:30] insgesamt 40632
[2022-11-10 21:36:30] -rw-r--r-- 2 yeti yeti    17905 Nov 10 21:30 start_atlas.sh
[2022-11-10 21:36:30] -rw-r--r-- 2 yeti yeti   391207 Nov 10 21:30 input.tar.gz
[2022-11-10 21:36:30] -rw-r--r-- 2 yeti yeti 37960264 Nov 10 21:30 ATLAS.root_0
[2022-11-10 21:36:30] -rw------- 1 yeti yeti  1352762 Nov 10 21:36 HITS.pool.root.1
[2022-11-10 21:36:30] -rw------- 1 yeti yeti  1873920 Nov 10 21:36 result.tar.gz
21:36:32 (704166): run_atlas exited; CPU time 295.905375
21:36:32 (704166): called boinc_finish(0)

</stderr_txt>
]]>

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