Stderr output

<core_client_version>7.21.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:49 (733528): wrapper (7.7.26015): starting
09:30:49 (733528): wrapper: running run_atlas (--nthreads 6)
[2022-11-15 09:30:49] Arguments: --nthreads 6
[2022-11-15 09:30:49] Threads: 6
[2022-11-15 09:30:49] Checking for CVMFS
[2022-11-15 09:30:49] Probing /cvmfs/atlas.cern.ch... OK
[2022-11-15 09:30:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-11-15 09:30:49] Running cvmfs_config stat atlas.cern.ch
[2022-11-15 09:30:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-11-15 09:30:49] 2.10.0.0 677606 40 46308 112130 3 64 1797226 4096001 0 130560 0 201747 99.970 21245 1981 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2022-11-15 09:30:49] CVMFS is ok
[2022-11-15 09:30:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2022-11-15 09:30:49] Small home clusters do not require a local http proxy but it is suggested if
[2022-11-15 09:30:49] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2022-11-15 09:30:49] Further information can be found at the LHC@home message board.
[2022-11-15 09:30:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-11-15 09:30:49] Checking for apptainer binary...
[2022-11-15 09:30:49] apptainer is not installed, using version from CVMFS
[2022-11-15 09:30:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-11-15 09:30:50] Michelle
[2022-11-15 09:30:50] apptainer works
[2022-11-15 09:30:50] Set ATHENA_PROC_NUMBER=6
[2022-11-15 09:30:50] Starting ATLAS job with PandaID=5515971838
[2022-11-15 09:30:50] Try creating a directory in /tmp
[2022-11-15 09:30:50] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /tmp/tmp.XXXXX
[2022-11-15 09:30:50] /tmp/tmp.2qw3F
[2022-11-15 09:30:50] Try creating a directory in /var/tmp
[2022-11-15 09:30:50] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /var/tmp/tmp.XXXXX
[2022-11-15 09:30:50] /var/tmp/tmp.ViKEb
[2022-11-15 09:30:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-11-15 09:40:28]  *** The last 200 lines of the pilot log: ***
[2022-11-15 09:40:28]  filetype=output
[2022-11-15 09:40:28]  guid=988D43C1-AC56-734E-8D9D-E04DEFFB09C6
[2022-11-15 09:40:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-11-15 09:40:28]  is_tar=False
[2022-11-15 09:40:28]  lfn=output.1.8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.pool.root
[2022-11-15 09:40:28]  mtime=0
[2022-11-15 09:40:28]  protocol_id=None
[2022-11-15 09:40:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-11-15 09:40:28]  replicas=None
[2022-11-15 09:40:28]  scope=hc_test
[2022-11-15 09:40:28]  status=None
[2022-11-15 09:40:28]  status_code=0
[2022-11-15 09:40:28]  storage_token=
[2022-11-15 09:40:28]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.pool.root
[2022-11-15 09:40:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/90/79/output.1.8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.pool.root
[2022-11-15 09:40:28]  workdir=None
[2022-11-15 09:40:28] ]
[2022-11-15 09:40:28] 2022-11-15 09:40:07,748 | INFO     | transferring file output.1.8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.pool.root from /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/output.1.8a6e71
[2022-11-15 09:40:28] 2022-11-15 09:40:07,748 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.pool.root /va
[2022-11-15 09:40:28] 2022-11-15 09:40:07,756 | INFO     | Adding to output.list: output.1.8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.pool.root davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/90/79
[2022-11-15 09:40:28] 2022-11-15 09:40:07,757 | INFO     | executing command: ps aux -q 738880
[2022-11-15 09:40:28] 2022-11-15 09:40:07,765 | INFO     | summary of transferred files:
[2022-11-15 09:40:28] 2022-11-15 09:40:07,765 | INFO     |  -- lfn=output.1.8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.pool.root, status_code=0, status=transferred
[2022-11-15 09:40:28] 2022-11-15 09:40:07,765 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838
[2022-11-15 09:40:28] 2022-11-15 09:40:07,778 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838
[2022-11-15 09:40:28] 2022-11-15 09:40:07,785 | INFO     | will create archive /var/lib/boinc-client/slots/0/8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz
[2022-11-15 09:40:28] 2022-11-15 09:40:07,785 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/0/8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz tarball_PandaJob_5515971838_BOINC-
[2022-11-15 09:40:28] 2022-11-15 09:40:07,806 | INFO     | copied /var/lib/boinc-client/slots/0/8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz to /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838
[2022-11-15 09:40:28] 2022-11-15 09:40:07,806 | INFO     | prepare to stage-out 1 log file(s)
[2022-11-15 09:40:28] 2022-11-15 09:40:07,806 | INFO     | stage-out will not be done in a container
[2022-11-15 09:40:28] 2022-11-15 09:40:07,806 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2022-11-15 09:40:28] 2022-11-15 09:40:07,806 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2022-11-15 09:40:28] 2022-11-15 09:40:07,806 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2022-11-15 09:40:28] 2022-11-15 09:40:07,806 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2022-11-15 09:40:28] 2022-11-15 09:40:07,857 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2022-11-15 09:40:28] 2022-11-15 09:40:07,857 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2022-11-15 09:40:28]  activity=['pl', 'pw', 'w', 'default']
[2022-11-15 09:40:28]  allow_lan=True
[2022-11-15 09:40:28]  allow_wan=False
[2022-11-15 09:40:28]  checkinputsize=True
[2022-11-15 09:40:28]  checksum={'adler32': 'a063c245'}
[2022-11-15 09:40:28]  dataset=hc_test.gangarbt.hc20247452.tid1184.BOINC-TEST.23
[2022-11-15 09:40:28]  ddm_activity=['write_lan', 'write_wan']
[2022-11-15 09:40:28]  ddmendpoint=NDGF-T1_DATADISK
[2022-11-15 09:40:28]  direct_access_lan=False
[2022-11-15 09:40:28]  direct_access_wan=False
[2022-11-15 09:40:28]  domain=
[2022-11-15 09:40:28]  filesize=153484
[2022-11-15 09:40:28]  filetype=log
[2022-11-15 09:40:28]  guid=e5faf5be-08d3-42e1-a1bb-2b7a1e3c51c3
[2022-11-15 09:40:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-11-15 09:40:28]  is_tar=False
[2022-11-15 09:40:28]  lfn=8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz
[2022-11-15 09:40:28]  mtime=0
[2022-11-15 09:40:28]  protocol_id=None
[2022-11-15 09:40:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-11-15 09:40:28]  replicas=None
[2022-11-15 09:40:28]  scope=hc_test
[2022-11-15 09:40:28]  status=None
[2022-11-15 09:40:28]  status_code=0
[2022-11-15 09:40:28]  storage_token=
[2022-11-15 09:40:28]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz
[2022-11-15 09:40:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e0/69/8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz
[2022-11-15 09:40:28]  workdir=None
[2022-11-15 09:40:28] ]
[2022-11-15 09:40:28] 2022-11-15 09:40:07,877 | INFO     | transferring file 8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz from /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9
[2022-11-15 09:40:28] 2022-11-15 09:40:07,877 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz /var/lib
[2022-11-15 09:40:28] 2022-11-15 09:40:07,883 | INFO     | Adding to output.list: 8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e0/69/8a6e
[2022-11-15 09:40:28] 2022-11-15 09:40:07,884 | INFO     | executing command: ps aux -q 738880
[2022-11-15 09:40:28] 2022-11-15 09:40:07,891 | INFO     | summary of transferred files:
[2022-11-15 09:40:28] 2022-11-15 09:40:07,891 | INFO     |  -- lfn=8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz, status_code=0, status=transferred
[2022-11-15 09:40:28] 2022-11-15 09:40:07,891 | INFO     | stage-out finished correctly
[2022-11-15 09:40:28] 2022-11-15 09:40:10,478 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2022-11-15 09:40:28] 2022-11-15 09:40:10,547 | INFO     | job 5515971838 has state=finished
[2022-11-15 09:40:28] 2022-11-15 09:40:10,547 | INFO     | preparing for final server update for job 5515971838 in state='finished'
[2022-11-15 09:40:28] 2022-11-15 09:40:10,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2022-11-15 09:40:28] 2022-11-15 09:40:10,547 | INFO     | job 5515971838 has finished - writing final server update
[2022-11-15 09:40:28] 2022-11-15 09:40:10,548 | WARNING  | wrong length of table data, x=[1668504990.0, 1668505051.0], y=[1221570.0, 1231882.0] (must be same and length>=4)
[2022-11-15 09:40:28] 2022-11-15 09:40:10,548 | INFO     | total number of processed events: 2 (read)
[2022-11-15 09:40:28] 2022-11-15 09:40:10,568 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-11-15 09:40:28] 2022-11-15 09:40:10,588 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-11-15 09:40:28] 2022-11-15 09:40:10,590 | INFO     | extracted standard info from prmon json
[2022-11-15 09:40:28] 2022-11-15 09:40:10,590 | INFO     | extracted standard memory fields from prmon json
[2022-11-15 09:40:28] 2022-11-15 09:40:10,591 | INFO     | ..............................
[2022-11-15 09:40:28] 2022-11-15 09:40:10,591 | INFO     | . Timing measurements:
[2022-11-15 09:40:28] 2022-11-15 09:40:10,591 | INFO     | . get job = 0 s
[2022-11-15 09:40:28] 2022-11-15 09:40:10,591 | INFO     | . initial setup = 1 s
[2022-11-15 09:40:28] 2022-11-15 09:40:10,591 | INFO     | . payload setup = 8 s
[2022-11-15 09:40:28] 2022-11-15 09:40:10,591 | INFO     | . stage-in = 0 s
[2022-11-15 09:40:28] 2022-11-15 09:40:10,592 | INFO     | . payload execution = 520 s
[2022-11-15 09:40:28] 2022-11-15 09:40:10,592 | INFO     | . stage-out = 0 s
[2022-11-15 09:40:28] 2022-11-15 09:40:10,592 | INFO     | ..............................
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | 
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | job summary report
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | --------------------------------------------------
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | PanDA job id: 5515971838
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | task id: NULL
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | errors: (none)
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | status: LOG_TRANSFER = DONE 
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | pilot state: finished 
[2022-11-15 09:40:28] 2022-11-15 09:40:10,624 | INFO     | transexitcode: 0
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | exeerrorcode: 0
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | exeerrordiag: 
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | exitcode: 0
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | exitmsg: OK
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | cpuconsumptiontime: 201 s
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | nevents: 2
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | neventsw: 0
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | pid: 741946
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | pgrp: 741946
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | corecount: 6
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | event service: False
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | sizes: {0: 2572082, 11: 2572082, 532: 2591472, 533: 2600576, 536: 2601534}
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | --------------------------------------------------
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | 
[2022-11-15 09:40:28] 2022-11-15 09:40:10,625 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue jobs had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue payloads had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue data_in had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue data_out had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue completed_jobids has 1 job(s)
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | queue messages had 0 job(s) [purged]
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | job 5515971838 has completed (purged errors)
[2022-11-15 09:40:28] 2022-11-15 09:40:10,634 | INFO     | overall cleanup function is called
[2022-11-15 09:40:28] 2022-11-15 09:40:11,640 | INFO     | --- collectZombieJob: --- 10, [741946]
[2022-11-15 09:40:28] 2022-11-15 09:40:11,640 | INFO     | zombie collector trying to kill pid 741946
[2022-11-15 09:40:28] 2022-11-15 09:40:11,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-11-15 09:40:28] 2022-11-15 09:40:12,646 | INFO     | collected zombie processes
[2022-11-15 09:40:28] 2022-11-15 09:40:12,646 | INFO     | will now attempt to kill all subprocesses of pid=741946
[2022-11-15 09:40:28] 2022-11-15 09:40:12,692 | INFO     | process IDs to be killed: [741946] (in reverse order)
[2022-11-15 09:40:28] 2022-11-15 09:40:12,705 | WARNING  | found no corresponding commands to process id(s)
[2022-11-15 09:40:28] 2022-11-15 09:40:12,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2022-11-15 09:40:28] 2022-11-15 09:40:12,705 | INFO     | ready for new job
[2022-11-15 09:40:28] 2022-11-15 09:40:12,705 | INFO     | pilot has finished with previous job - re-establishing logging
[2022-11-15 09:40:28] 2022-11-15 09:40:12,706 | INFO     | *****************************************
[2022-11-15 09:40:28] 2022-11-15 09:40:12,706 | INFO     | ***  PanDA Pilot version 3.4.0 (118)  ***
[2022-11-15 09:40:28] 2022-11-15 09:40:12,706 | INFO     | *****************************************
[2022-11-15 09:40:28] 2022-11-15 09:40:12,706 | INFO     | 
[2022-11-15 09:40:28] 2022-11-15 09:40:12,724 | INFO     | architecture information:
[2022-11-15 09:40:28] 2022-11-15 09:40:12,777 | INFO     | 
[2022-11-15 09:40:28] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-11-15 09:40:28] Distributor ID:	CentOS
[2022-11-15 09:40:28] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-11-15 09:40:28] Release:	7.9.2009
[2022-11-15 09:40:28] Codename:	Core
[2022-11-15 09:40:28] 2022-11-15 09:40:12,778 | INFO     | *****************************************
[2022-11-15 09:40:28] 2022-11-15 09:40:13,281 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2022-11-15 09:40:28] 2022-11-15 09:40:13,306 | INFO     | sufficient remaining disk space (391700807680 B)
[2022-11-15 09:40:28] 2022-11-15 09:40:13,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2022-11-15 09:40:28] 2022-11-15 09:40:13,308 | INFO     | [job] retrieve thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:13,308 | WARNING  | aborting monitor loop since graceful_stop has been set
[2022-11-15 09:40:28] 2022-11-15 09:40:13,308 | INFO     | [monitor] control thread has ended
[2022-11-15 09:40:28] 2022-11-15 09:40:13,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2022-11-15 09:40:28] 2022-11-15 09:40:13,731 | INFO     | [job] create_data_payload thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:13,840 | INFO     | [payload] validate_pre thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:13,868 | INFO     | [job] validate thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:13,908 | INFO     | [payload] execute_payloads thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:13,940 | INFO     | [data] copytool_in thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:14,165 | INFO     | [data] control thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:14,205 | INFO     | [payload] control thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:14,432 | INFO     | [data] copytool_out thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:14,433 | INFO     | [payload] validate_post thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:14,562 | INFO     | [payload] failed_post thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:14,565 | INFO     | [job] control thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:15,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2022-11-15 09:40:28] 2022-11-15 09:40:15,635 | INFO     | [job] queue monitor thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:16,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-11-15 09:40:28] 2022-11-15 09:40:19,519 | INFO     | [data] queue_monitor thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:26,844 | INFO     | job.realtimelogging is not enabled
[2022-11-15 09:40:28] 2022-11-15 09:40:26,845 | INFO     | [payload] run_realtimelog thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:27,464 | WARNING  | no jobs in monitored_payloads queue (waited for 72 s)
[2022-11-15 09:40:28] 2022-11-15 09:40:27,464 | INFO     | [job] job monitor thread has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:28,190 | INFO     | end of generic workflow (traces error code: 0)
[2022-11-15 09:40:28] 2022-11-15 09:40:28,191 | INFO     | traces error code: 0
[2022-11-15 09:40:28] 2022-11-15 09:40:28,191 | INFO     | pilot has finished
[2022-11-15 09:40:28] 2022-11-15 09:40:28,222 [wrapper] ==== pilot stdout END ====
[2022-11-15 09:40:28] 2022-11-15 09:40:28,223 [wrapper] ==== wrapper stdout RESUME ====
[2022-11-15 09:40:28] 2022-11-15 09:40:28,224 [wrapper] pilotpid: 738880
[2022-11-15 09:40:28] 2022-11-15 09:40:28,226 [wrapper] Pilot exit status: 0
[2022-11-15 09:40:28] 2022-11-15 09:40:28,229 [wrapper] pandaids: 5515971838
[2022-11-15 09:40:28] 2022-11-15 09:40:28,231 [wrapper] apfmon messages muted
[2022-11-15 09:40:28] 2022-11-15 09:40:28,232 [wrapper] Test setup, not cleaning
[2022-11-15 09:40:28] 2022-11-15 09:40:28,233 [wrapper] ==== wrapper stdout END ====
[2022-11-15 09:40:28] 2022-11-15 09:40:28,234 [wrapper] ==== wrapper stderr END ====
[2022-11-15 09:40:28] 2022-11-15 09:40:28,236 [wrapper] wrapperexiting ec=0, duration=578
[2022-11-15 09:40:28] 2022-11-15 09:40:28,238 [wrapper] apfmon messages muted
[2022-11-15 09:40:28]  *** Error codes and diagnostics ***
[2022-11-15 09:40:28]     "exeErrorCode": 0,
[2022-11-15 09:40:28]     "exeErrorDiag": "",
[2022-11-15 09:40:28]     "pilotErrorCode": 0,
[2022-11-15 09:40:28]     "pilotErrorDiag": "",
[2022-11-15 09:40:28]  *** Listing of results directory ***
[2022-11-15 09:40:28] total 43796
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc   379728 Nov 15 07:31 pilot3.tar.gz
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc     4540 Nov 15 07:55 queuedata.json
[2022-11-15 09:40:28] -rwx------ 1 boinc boinc    26318 Nov 15 07:55 runpilot2-wrapper.sh
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc      107 Nov 15 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2022-11-15 09:40:28] -rwxr-xr-x 1 boinc boinc     8273 Nov 15 09:30 run_atlas
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc      112 Nov 15 09:30 job.xml
[2022-11-15 09:40:28] -rw-r--r-- 2 boinc boinc    17905 Nov 15 09:30 start_atlas.sh
[2022-11-15 09:40:28] drwxrwx--x 2 boinc boinc     4096 Nov 15 09:30 shared
[2022-11-15 09:40:28] -rw-r--r-- 2 boinc boinc   391212 Nov 15 09:30 input.tar.gz
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc     9255 Nov 15 09:30 init_data.xml
[2022-11-15 09:40:28] -rw-r--r-- 2 boinc boinc 37960264 Nov 15 09:30 EVNT.04972714._000040.pool.root.1
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc        0 Nov 15 09:30 boinc_lockfile
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc     2792 Nov 15 09:30 pandaJob.out
[2022-11-15 09:40:28] -rw------- 1 boinc boinc      416 Nov 15 09:30 setup.sh.local
[2022-11-15 09:40:28] -rw------- 1 boinc boinc  1027905 Nov 15 09:31 agis_schedconf.cvmfs.json
[2022-11-15 09:40:28] -rw------- 1 boinc boinc  1728450 Nov 15 09:31 agis_ddmendpoints.agis.ALL.json
[2022-11-15 09:40:28] drwx------ 4 boinc boinc     4096 Nov 15 09:31 pilot3
[2022-11-15 09:40:28] -rw------- 1 boinc boinc  1333730 Nov 15 09:39 output.1.8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.pool.root
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc      532 Nov 15 09:39 boinc_task_state.xml
[2022-11-15 09:40:28] -rw------- 1 boinc boinc     1021 Nov 15 09:40 memory_monitor_summary.json
[2022-11-15 09:40:28] -rw------- 1 boinc boinc   153484 Nov 15 09:40 8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log.tgz
[2022-11-15 09:40:28] -rw------- 1 boinc boinc     6654 Nov 15 09:40 heartbeat.json
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc       24 Nov 15 09:40 wrapper_checkpoint.txt
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc     8192 Nov 15 09:40 boinc_mmap_file
[2022-11-15 09:40:28] -rw------- 1 boinc boinc     2974 Nov 15 09:40 pilotlog.txt
[2022-11-15 09:40:28] -rw------- 1 boinc boinc    79527 Nov 15 09:40 8a6e718d-c92a-4ece-9644-00064918658-1668498936_98767.1.job.log
[2022-11-15 09:40:28] -rw------- 1 boinc boinc      504 Nov 15 09:40 output.list
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc      788 Nov 15 09:40 runtime_log
[2022-11-15 09:40:28] -rw------- 1 boinc boinc  1587200 Nov 15 09:40 result.tar.gz
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc    11216 Nov 15 09:40 runtime_log.err
[2022-11-15 09:40:28] -rw------- 1 boinc boinc      636 Nov 15 09:40 BOMLDmLy5E2n7Olcko1bjSoqABFKDmABFKDmFymXDmt7MKDm6ueZmn.diag
[2022-11-15 09:40:28] -rw-r--r-- 1 boinc boinc    22211 Nov 15 09:40 stderr.txt
[2022-11-15 09:40:28] HITS file was successfully produced:
[2022-11-15 09:40:28] -rw------- 1 boinc boinc 1333730 Nov 15 09:39 shared/HITS.pool.root.1
[2022-11-15 09:40:28]  *** Contents of shared directory: ***
[2022-11-15 09:40:28] total 40332
[2022-11-15 09:40:28] -rw-r--r-- 2 boinc boinc    17905 Nov 15 09:30 start_atlas.sh
[2022-11-15 09:40:28] -rw-r--r-- 2 boinc boinc   391212 Nov 15 09:30 input.tar.gz
[2022-11-15 09:40:28] -rw-r--r-- 2 boinc boinc 37960264 Nov 15 09:30 ATLAS.root_0
[2022-11-15 09:40:28] -rw------- 1 boinc boinc  1333730 Nov 15 09:39 HITS.pool.root.1
[2022-11-15 09:40:28] -rw------- 1 boinc boinc  1587200 Nov 15 09:40 result.tar.gz
09:40:29 (733528): run_atlas exited; CPU time 200.226388
09:40:29 (733528): called boinc_finish(0)

</stderr_txt>
]]>

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