Stderr output

<core_client_version>7.21.0</core_client_version>
<![CDATA[
<stderr_txt>
09:17:12 (911097): wrapper (7.7.26015): starting
09:17:12 (911097): wrapper: running run_atlas (--nthreads 6)
[2022-11-16 09:17:12] Arguments: --nthreads 6
[2022-11-16 09:17:12] Threads: 6
[2022-11-16 09:17:12] Checking for CVMFS
[2022-11-16 09:17:12] Probing /cvmfs/atlas.cern.ch... OK
[2022-11-16 09:17:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-11-16 09:17:13] Running cvmfs_config stat atlas.cern.ch
[2022-11-16 09:17:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-11-16 09:17:13] 2.10.0.0 883097 21 39984 112173 3 1 1852560 4096000 0 130560 0 100208 99.975 21249 2998 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2022-11-16 09:17:13] CVMFS is ok
[2022-11-16 09:17:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2022-11-16 09:17:13] Small home clusters do not require a local http proxy but it is suggested if
[2022-11-16 09:17:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2022-11-16 09:17:13] Further information can be found at the LHC@home message board.
[2022-11-16 09:17:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-11-16 09:17:13] Checking for apptainer binary...
[2022-11-16 09:17:13] apptainer is not installed, using version from CVMFS
[2022-11-16 09:17:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-11-16 09:17:13] Michelle
[2022-11-16 09:17:13] apptainer works
[2022-11-16 09:17:13] Set ATHENA_PROC_NUMBER=6
[2022-11-16 09:17:13] Starting ATLAS job with PandaID=5515971838
[2022-11-16 09:17:13] Try creating a directory in /tmp
[2022-11-16 09:17:13] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /tmp/tmp.XXXXX
[2022-11-16 09:17:13] /tmp/tmp.Wt6fR
[2022-11-16 09:17:13] Try creating a directory in /var/tmp
[2022-11-16 09:17:13] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /var/tmp/tmp.XXXXX
[2022-11-16 09:17:13] /var/tmp/tmp.qvPNZ
[2022-11-16 09:17:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-11-16 09:27:01]  *** The last 200 lines of the pilot log: ***
[2022-11-16 09:27:01]  filesize=1333722
[2022-11-16 09:27:01]  filetype=output
[2022-11-16 09:27:01]  guid=A7DFE642-7C01-D64B-9F3F-BE7105F4925B
[2022-11-16 09:27:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-11-16 09:27:01]  is_tar=False
[2022-11-16 09:27:01]  lfn=output.1.8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.pool.root
[2022-11-16 09:27:01]  mtime=0
[2022-11-16 09:27:01]  protocol_id=None
[2022-11-16 09:27:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-11-16 09:27:01]  replicas=None
[2022-11-16 09:27:01]  scope=hc_test
[2022-11-16 09:27:01]  status=None
[2022-11-16 09:27:01]  status_code=0
[2022-11-16 09:27:01]  storage_token=
[2022-11-16 09:27:01]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.pool.root
[2022-11-16 09:27:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/15/25/output.1.8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.pool.root
[2022-11-16 09:27:01]  workdir=None
[2022-11-16 09:27:01] ]
[2022-11-16 09:27:01] 2022-11-16 09:26:45,626 | INFO     | transferring file output.1.8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.pool.root from /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/output.1.8a6e7
[2022-11-16 09:27:01] 2022-11-16 09:26:45,626 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.pool.root /v
[2022-11-16 09:27:01] 2022-11-16 09:26:45,635 | INFO     | Adding to output.list: output.1.8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.pool.root davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/15/2
[2022-11-16 09:27:01] 2022-11-16 09:26:45,635 | INFO     | executing command: ps aux -q 916446
[2022-11-16 09:27:01] 2022-11-16 09:26:45,646 | INFO     | summary of transferred files:
[2022-11-16 09:27:01] 2022-11-16 09:26:45,646 | INFO     |  -- lfn=output.1.8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.pool.root, status_code=0, status=transferred
[2022-11-16 09:27:01] 2022-11-16 09:26:45,646 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838
[2022-11-16 09:27:01] 2022-11-16 09:26:45,659 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838
[2022-11-16 09:27:01] 2022-11-16 09:26:45,666 | INFO     | will create archive /var/lib/boinc-client/slots/0/8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz
[2022-11-16 09:27:01] 2022-11-16 09:26:45,666 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/0/8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz tarball_PandaJob_5515971838_BOINC
[2022-11-16 09:27:01] 2022-11-16 09:26:45,687 | INFO     | copied /var/lib/boinc-client/slots/0/8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz to /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838
[2022-11-16 09:27:01] 2022-11-16 09:26:45,687 | INFO     | prepare to stage-out 1 log file(s)
[2022-11-16 09:27:01] 2022-11-16 09:26:45,687 | INFO     | stage-out will not be done in a container
[2022-11-16 09:27:01] 2022-11-16 09:26:45,688 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2022-11-16 09:27:01] 2022-11-16 09:26:45,688 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2022-11-16 09:27:01] 2022-11-16 09:26:45,688 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2022-11-16 09:27:01] 2022-11-16 09:26:45,688 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2022-11-16 09:27:01] 2022-11-16 09:26:45,738 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2022-11-16 09:27:01] 2022-11-16 09:26:45,738 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2022-11-16 09:27:01]  activity=['pl', 'pw', 'w', 'default']
[2022-11-16 09:27:01]  allow_lan=True
[2022-11-16 09:27:01]  allow_wan=False
[2022-11-16 09:27:01]  checkinputsize=True
[2022-11-16 09:27:01]  checksum={'adler32': '51543eb1'}
[2022-11-16 09:27:01]  dataset=hc_test.gangarbt.hc20247452.tid1184.BOINC-TEST.23
[2022-11-16 09:27:01]  ddm_activity=['write_lan', 'write_wan']
[2022-11-16 09:27:01]  ddmendpoint=NDGF-T1_DATADISK
[2022-11-16 09:27:01]  direct_access_lan=False
[2022-11-16 09:27:01]  direct_access_wan=False
[2022-11-16 09:27:01]  domain=
[2022-11-16 09:27:01]  filesize=153460
[2022-11-16 09:27:01]  filetype=log
[2022-11-16 09:27:01]  guid=e5faf5be-08d3-42e1-a1bb-2b7a1e3c51c3
[2022-11-16 09:27:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-11-16 09:27:01]  is_tar=False
[2022-11-16 09:27:01]  lfn=8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz
[2022-11-16 09:27:01]  mtime=0
[2022-11-16 09:27:01]  protocol_id=None
[2022-11-16 09:27:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-11-16 09:27:01]  replicas=None
[2022-11-16 09:27:01]  scope=hc_test
[2022-11-16 09:27:01]  status=None
[2022-11-16 09:27:01]  status_code=0
[2022-11-16 09:27:01]  storage_token=
[2022-11-16 09:27:01]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz
[2022-11-16 09:27:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/0b/74/8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz
[2022-11-16 09:27:01]  workdir=None
[2022-11-16 09:27:01] ]
[2022-11-16 09:27:01] 2022-11-16 09:26:45,758 | INFO     | transferring file 8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz from /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-
[2022-11-16 09:27:01] 2022-11-16 09:26:45,758 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz /var/li
[2022-11-16 09:27:01] 2022-11-16 09:26:45,765 | INFO     | Adding to output.list: 8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/0b/74/8a6
[2022-11-16 09:27:01] 2022-11-16 09:26:45,765 | INFO     | executing command: ps aux -q 916446
[2022-11-16 09:27:01] 2022-11-16 09:26:45,773 | INFO     | summary of transferred files:
[2022-11-16 09:27:01] 2022-11-16 09:26:45,773 | INFO     |  -- lfn=8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz, status_code=0, status=transferred
[2022-11-16 09:27:01] 2022-11-16 09:26:45,773 | INFO     | stage-out finished correctly
[2022-11-16 09:27:01] 2022-11-16 09:26:47,323 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2022-11-16 09:27:01] 2022-11-16 09:26:47,356 | INFO     | job 5515971838 has state=finished
[2022-11-16 09:27:01] 2022-11-16 09:26:47,356 | INFO     | preparing for final server update for job 5515971838 in state='finished'
[2022-11-16 09:27:01] 2022-11-16 09:26:47,356 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2022-11-16 09:27:01] 2022-11-16 09:26:47,356 | INFO     | job 5515971838 has finished - writing final server update
[2022-11-16 09:27:01] 2022-11-16 09:26:47,356 | WARNING  | wrong length of table data, x=[1668590578.0, 1668590639.0], y=[1221382.0, 1221422.0] (must be same and length>=4)
[2022-11-16 09:27:01] 2022-11-16 09:26:47,356 | INFO     | total number of processed events: 2 (read)
[2022-11-16 09:27:01] 2022-11-16 09:26:47,376 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-11-16 09:27:01] 2022-11-16 09:26:47,387 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | extracted standard info from prmon json
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | extracted standard memory fields from prmon json
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | ..............................
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | . Timing measurements:
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | . get job = 0 s
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | . initial setup = 1 s
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | . payload setup = 8 s
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | . stage-in = 0 s
[2022-11-16 09:27:01] 2022-11-16 09:26:47,388 | INFO     | . payload execution = 531 s
[2022-11-16 09:27:01] 2022-11-16 09:26:47,389 | INFO     | . stage-out = 0 s
[2022-11-16 09:27:01] 2022-11-16 09:26:47,389 | INFO     | ..............................
[2022-11-16 09:27:01] 2022-11-16 09:26:47,471 | INFO     | 
[2022-11-16 09:27:01] 2022-11-16 09:26:47,471 | INFO     | job summary report
[2022-11-16 09:27:01] 2022-11-16 09:26:47,471 | INFO     | --------------------------------------------------
[2022-11-16 09:27:01] 2022-11-16 09:26:47,471 | INFO     | PanDA job id: 5515971838
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | task id: NULL
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | errors: (none)
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | status: LOG_TRANSFER = DONE 
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | pilot state: finished 
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | transexitcode: 0
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | exeerrorcode: 0
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | exeerrordiag: 
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | exitcode: 0
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | exitmsg: OK
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | cpuconsumptiontime: 206 s
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | nevents: 2
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | neventsw: 0
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | pid: 919481
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | pgrp: 919481
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | corecount: 6
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | event service: False
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | sizes: {0: 2572314, 11: 2572314, 543: 2600814, 545: 2601716}
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | --------------------------------------------------
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | 
[2022-11-16 09:27:01] 2022-11-16 09:26:47,472 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2022-11-16 09:27:01] 2022-11-16 09:26:47,483 | INFO     | queue jobs had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,483 | INFO     | queue payloads had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,483 | INFO     | queue data_in had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,483 | INFO     | queue data_out had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,483 | INFO     | queue current_data_in had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue completed_jobids has 1 job(s)
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,484 | INFO     | queue messages had 0 job(s) [purged]
[2022-11-16 09:27:01] 2022-11-16 09:26:47,485 | INFO     | job 5515971838 has completed (purged errors)
[2022-11-16 09:27:01] 2022-11-16 09:26:47,485 | INFO     | overall cleanup function is called
[2022-11-16 09:27:01] 2022-11-16 09:26:48,491 | INFO     | --- collectZombieJob: --- 10, [919481]
[2022-11-16 09:27:01] 2022-11-16 09:26:48,491 | INFO     | zombie collector trying to kill pid 919481
[2022-11-16 09:27:01] 2022-11-16 09:26:48,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-11-16 09:27:01] 2022-11-16 09:26:49,497 | INFO     | collected zombie processes
[2022-11-16 09:27:01] 2022-11-16 09:26:49,497 | INFO     | will now attempt to kill all subprocesses of pid=919481
[2022-11-16 09:27:01] 2022-11-16 09:26:49,558 | INFO     | process IDs to be killed: [919481] (in reverse order)
[2022-11-16 09:27:01] 2022-11-16 09:26:49,572 | WARNING  | found no corresponding commands to process id(s)
[2022-11-16 09:27:01] 2022-11-16 09:26:49,572 | INFO     | Do not look for orphan processes in BOINC jobs
[2022-11-16 09:27:01] 2022-11-16 09:26:49,572 | INFO     | ready for new job
[2022-11-16 09:27:01] 2022-11-16 09:26:49,572 | INFO     | pilot has finished with previous job - re-establishing logging
[2022-11-16 09:27:01] 2022-11-16 09:26:49,572 | INFO     | *****************************************
[2022-11-16 09:27:01] 2022-11-16 09:26:49,572 | INFO     | ***  PanDA Pilot version 3.4.0 (118)  ***
[2022-11-16 09:27:01] 2022-11-16 09:26:49,572 | INFO     | *****************************************
[2022-11-16 09:27:01] 2022-11-16 09:26:49,573 | INFO     | 
[2022-11-16 09:27:01] 2022-11-16 09:26:49,592 | INFO     | architecture information:
[2022-11-16 09:27:01] 2022-11-16 09:26:49,647 | INFO     | 
[2022-11-16 09:27:01] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-11-16 09:27:01] Distributor ID:	CentOS
[2022-11-16 09:27:01] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-11-16 09:27:01] Release:	7.9.2009
[2022-11-16 09:27:01] Codename:	Core
[2022-11-16 09:27:01] 2022-11-16 09:26:49,648 | INFO     | *****************************************
[2022-11-16 09:27:01] 2022-11-16 09:26:50,151 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2022-11-16 09:27:01] 2022-11-16 09:26:50,178 | INFO     | sufficient remaining disk space (391864385536 B)
[2022-11-16 09:27:01] 2022-11-16 09:26:50,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2022-11-16 09:27:01] 2022-11-16 09:26:50,180 | INFO     | [job] retrieve thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:50,387 | INFO     | [payload] failed_post thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:50,592 | INFO     | [job] create_data_payload thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:50,611 | INFO     | [payload] validate_pre thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:50,660 | INFO     | [job] validate thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:50,769 | INFO     | [data] copytool_in thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:50,795 | INFO     | [job] control thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:50,833 | INFO     | [data] control thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:50,876 | INFO     | [monitor] control thread has ended
[2022-11-16 09:27:01] 2022-11-16 09:26:51,039 | INFO     | [payload] control thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:51,290 | INFO     | [payload] execute_payloads thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:51,314 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2022-11-16 09:27:01] 2022-11-16 09:26:51,721 | INFO     | [payload] validate_post thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:52,314 | INFO     | [data] copytool_out thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:52,436 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2022-11-16 09:27:01] 2022-11-16 09:26:52,437 | INFO     | [job] queue monitor thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:53,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-11-16 09:27:01] 2022-11-16 09:26:55,464 | WARNING  | no jobs in monitored_payloads queue (waited for 72 s)
[2022-11-16 09:27:01] 2022-11-16 09:26:55,464 | INFO     | [job] job monitor thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:26:56,363 | INFO     | [data] queue_monitor thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:27:00,974 | INFO     | job.realtimelogging is not enabled
[2022-11-16 09:27:01] 2022-11-16 09:27:00,975 | INFO     | [payload] run_realtimelog thread has finished
[2022-11-16 09:27:01] 2022-11-16 09:27:01,429 | INFO     | end of generic workflow (traces error code: 0)
[2022-11-16 09:27:01] 2022-11-16 09:27:01,429 | INFO     | traces error code: 0
[2022-11-16 09:27:01] 2022-11-16 09:27:01,430 | INFO     | pilot has finished
[2022-11-16 09:27:01] 2022-11-16 09:27:01,458 [wrapper] ==== pilot stdout END ====
[2022-11-16 09:27:01] 2022-11-16 09:27:01,460 [wrapper] ==== wrapper stdout RESUME ====
[2022-11-16 09:27:01] 2022-11-16 09:27:01,461 [wrapper] pilotpid: 916446
[2022-11-16 09:27:01] 2022-11-16 09:27:01,462 [wrapper] Pilot exit status: 0
[2022-11-16 09:27:01] 2022-11-16 09:27:01,467 [wrapper] pandaids: 5515971838
[2022-11-16 09:27:01] 2022-11-16 09:27:01,468 [wrapper] apfmon messages muted
[2022-11-16 09:27:01] 2022-11-16 09:27:01,469 [wrapper] Test setup, not cleaning
[2022-11-16 09:27:01] 2022-11-16 09:27:01,470 [wrapper] ==== wrapper stdout END ====
[2022-11-16 09:27:01] 2022-11-16 09:27:01,471 [wrapper] ==== wrapper stderr END ====
[2022-11-16 09:27:01] 2022-11-16 09:27:01,473 [wrapper] wrapperexiting ec=0, duration=587
[2022-11-16 09:27:01] 2022-11-16 09:27:01,474 [wrapper] apfmon messages muted
[2022-11-16 09:27:01]  *** Error codes and diagnostics ***
[2022-11-16 09:27:01]     "exeErrorCode": 0,
[2022-11-16 09:27:01]     "exeErrorDiag": "",
[2022-11-16 09:27:01]     "pilotErrorCode": 0,
[2022-11-16 09:27:01]     "pilotErrorDiag": "",
[2022-11-16 09:27:01]  *** Listing of results directory ***
[2022-11-16 09:27:01] total 43804
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc   379728 Nov 16 07:26 pilot3.tar.gz
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc     4540 Nov 16 08:15 queuedata.json
[2022-11-16 09:27:01] -rwx------ 1 boinc boinc    26318 Nov 16 08:17 runpilot2-wrapper.sh
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc      107 Nov 16 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2022-11-16 09:27:01] -rwxr-xr-x 1 boinc boinc     8273 Nov 16 09:17 run_atlas
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc      112 Nov 16 09:17 job.xml
[2022-11-16 09:27:01] -rw-r--r-- 2 boinc boinc    17923 Nov 16 09:17 start_atlas.sh
[2022-11-16 09:27:01] drwxrwx--x 2 boinc boinc     4096 Nov 16 09:17 shared
[2022-11-16 09:27:01] -rw-r--r-- 2 boinc boinc   391218 Nov 16 09:17 input.tar.gz
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc     9255 Nov 16 09:17 init_data.xml
[2022-11-16 09:27:01] -rw-r--r-- 2 boinc boinc 37960264 Nov 16 09:17 EVNT.04972714._000040.pool.root.1
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc        0 Nov 16 09:17 boinc_lockfile
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc     2797 Nov 16 09:17 pandaJob.out
[2022-11-16 09:27:01] -rw------- 1 boinc boinc      416 Nov 16 09:17 setup.sh.local
[2022-11-16 09:27:01] -rw------- 1 boinc boinc  1027836 Nov 16 09:17 agis_schedconf.cvmfs.json
[2022-11-16 09:27:01] -rw------- 1 boinc boinc  1728710 Nov 16 09:17 agis_ddmendpoints.agis.ALL.json
[2022-11-16 09:27:01] drwx------ 4 boinc boinc     4096 Nov 16 09:17 pilot3
[2022-11-16 09:27:01] -rw------- 1 boinc boinc  1333722 Nov 16 09:26 output.1.8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.pool.root
[2022-11-16 09:27:01] -rw------- 1 boinc boinc     1021 Nov 16 09:26 memory_monitor_summary.json
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc       24 Nov 16 09:26 wrapper_checkpoint.txt
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc     8192 Nov 16 09:26 boinc_mmap_file
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc      532 Nov 16 09:26 boinc_task_state.xml
[2022-11-16 09:27:01] -rw------- 1 boinc boinc   153460 Nov 16 09:26 8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log.tgz
[2022-11-16 09:27:01] -rw------- 1 boinc boinc     6657 Nov 16 09:26 heartbeat.json
[2022-11-16 09:27:01] -rw------- 1 boinc boinc     2882 Nov 16 09:27 pilotlog.txt
[2022-11-16 09:27:01] -rw------- 1 boinc boinc    79551 Nov 16 09:27 8a6e718d-c92a-4ece-9644-000649107180-1668586678_98767.1.job.log
[2022-11-16 09:27:01] -rw------- 1 boinc boinc      508 Nov 16 09:27 output.list
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc      792 Nov 16 09:27 runtime_log
[2022-11-16 09:27:01] -rw------- 1 boinc boinc  1587200 Nov 16 09:27 result.tar.gz
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc    11278 Nov 16 09:27 runtime_log.err
[2022-11-16 09:27:01] -rw------- 1 boinc boinc      638 Nov 16 09:27 RJfMDmXnSF2n7Olcko1bjSoqABFKDmABFKDmFymXDmVMNKDmSFxFjn.diag
[2022-11-16 09:27:01] -rw-r--r-- 1 boinc boinc    22132 Nov 16 09:27 stderr.txt
[2022-11-16 09:27:01] HITS file was successfully produced:
[2022-11-16 09:27:01] -rw------- 1 boinc boinc 1333722 Nov 16 09:26 shared/HITS.pool.root.1
[2022-11-16 09:27:01]  *** Contents of shared directory: ***
[2022-11-16 09:27:01] total 40336
[2022-11-16 09:27:01] -rw-r--r-- 2 boinc boinc    17923 Nov 16 09:17 start_atlas.sh
[2022-11-16 09:27:01] -rw-r--r-- 2 boinc boinc   391218 Nov 16 09:17 input.tar.gz
[2022-11-16 09:27:01] -rw-r--r-- 2 boinc boinc 37960264 Nov 16 09:17 ATLAS.root_0
[2022-11-16 09:27:01] -rw------- 1 boinc boinc  1333722 Nov 16 09:26 HITS.pool.root.1
[2022-11-16 09:27:01] -rw------- 1 boinc boinc  1587200 Nov 16 09:27 result.tar.gz
09:27:03 (911097): run_atlas exited; CPU time 205.465606
09:27:03 (911097): called boinc_finish(0)

</stderr_txt>
]]>

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