Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
06:54:07 (1282753): wrapper (7.7.26015): starting
06:54:07 (1282753): wrapper: running run_atlas (--nthreads 5)
[2022-11-22 06:54:07] Arguments: --nthreads 5
[2022-11-22 06:54:07] Threads: 5
[2022-11-22 06:54:07] Checking for CVMFS
[2022-11-22 06:54:07] Probing /cvmfs/atlas.cern.ch... OK
[2022-11-22 06:54:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2022-11-22 06:54:07] Running cvmfs_config stat atlas.cern.ch
[2022-11-22 06:54:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2022-11-22 06:54:08] 2.10.0.0 401333 148 68828 112440 3 80 3905076 4096000 1706 130560 0 2941561 99.924 307456 1080 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2022-11-22 06:54:08] CVMFS is ok
[2022-11-22 06:54:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2022-11-22 06:54:08] Small home clusters do not require a local http proxy but it is suggested if
[2022-11-22 06:54:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2022-11-22 06:54:08] Further information can be found at the LHC@home message board.
[2022-11-22 06:54:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2022-11-22 06:54:08] Checking for apptainer binary...
[2022-11-22 06:54:08] apptainer is not installed, using version from CVMFS
[2022-11-22 06:54:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2022-11-22 06:54:08] x40-linux
[2022-11-22 06:54:08] apptainer works
[2022-11-22 06:54:08] Set ATHENA_PROC_NUMBER=5
[2022-11-22 06:54:08] Starting ATLAS job with PandaID=5515971838
[2022-11-22 06:54:08] Try creating a directory in /tmp
[2022-11-22 06:54:08] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /tmp/tmp.XXXXX
[2022-11-22 06:54:08] /tmp/tmp.CRNli
[2022-11-22 06:54:08] Try creating a directory in /var/tmp
[2022-11-22 06:54:08] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7  mktemp /var/tmp/tmp.XXXXX
[2022-11-22 06:54:08] /var/tmp/tmp.X8zdD
[2022-11-22 06:54:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2022-11-22 07:07:21]  *** The last 200 lines of the pilot log: ***
[2022-11-22 07:07:21]  filesize=1331852
[2022-11-22 07:07:21]  filetype=output
[2022-11-22 07:07:21]  guid=916E84E8-A827-ED49-9824-F24A0E9BCEDC
[2022-11-22 07:07:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-11-22 07:07:21]  is_tar=False
[2022-11-22 07:07:21]  lfn=output.1.8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.pool.root
[2022-11-22 07:07:21]  mtime=0
[2022-11-22 07:07:21]  protocol_id=None
[2022-11-22 07:07:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-11-22 07:07:21]  replicas=None
[2022-11-22 07:07:21]  scope=hc_test
[2022-11-22 07:07:21]  status=None
[2022-11-22 07:07:21]  status_code=0
[2022-11-22 07:07:21]  storage_token=
[2022-11-22 07:07:21]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.pool.root
[2022-11-22 07:07:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/8d/2b/output.1.8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.pool.root
[2022-11-22 07:07:21]  workdir=None
[2022-11-22 07:07:21] ]
[2022-11-22 07:07:21] 2022-11-22 12:06:37,038 | INFO     | transferring file output.1.8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.pool.root from /var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838/output.1.8a6e
[2022-11-22 07:07:21] 2022-11-22 12:06:37,038 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838/output.1.8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.pool.root /
[2022-11-22 07:07:21] 2022-11-22 12:06:37,047 | INFO     | Adding to output.list: output.1.8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.pool.root davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/8d/
[2022-11-22 07:07:21] 2022-11-22 12:06:37,048 | INFO     | executing command: ps aux -q 1301096
[2022-11-22 07:07:21] 2022-11-22 12:06:37,058 | INFO     | summary of transferred files:
[2022-11-22 07:07:21] 2022-11-22 12:06:37,058 | INFO     |  -- lfn=output.1.8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.pool.root, status_code=0, status=transferred
[2022-11-22 07:07:21] 2022-11-22 12:06:37,058 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838
[2022-11-22 07:07:21] 2022-11-22 12:06:37,090 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838
[2022-11-22 07:07:21] 2022-11-22 12:06:37,102 | INFO     | will create archive /var/lib/boinc-client/slots/4/8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz
[2022-11-22 07:07:21] 2022-11-22 12:06:37,102 | INFO     | executing command: pwd;tar cvfz /var/lib/boinc-client/slots/4/8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz tarball_PandaJob_5515971838_BOIN
[2022-11-22 07:07:21] 2022-11-22 12:06:37,139 | INFO     | copied /var/lib/boinc-client/slots/4/8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz to /var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838
[2022-11-22 07:07:21] 2022-11-22 12:06:37,139 | INFO     | prepare to stage-out 1 log file(s)
[2022-11-22 07:07:21] 2022-11-22 12:06:37,139 | INFO     | stage-out will not be done in a container
[2022-11-22 07:07:21] 2022-11-22 12:06:37,140 | INFO     | configured copytools per activity: acopytools={'pr': ['mv'], 'pw': ['mv'], 'read_lan': ['mv'], 'write_lan': ['mv'], 'default': ['rucio']}
[2022-11-22 07:07:21] 2022-11-22 12:06:37,140 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2022-11-22 07:07:21] 2022-11-22 12:06:37,140 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2022-11-22 07:07:21] 2022-11-22 12:06:37,140 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2022-11-22 07:07:21] 2022-11-22 12:06:37,243 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2022-11-22 07:07:21] 2022-11-22 12:06:37,243 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2022-11-22 07:07:21]  activity=['pl', 'pw', 'w', 'default']
[2022-11-22 07:07:21]  allow_lan=True
[2022-11-22 07:07:21]  allow_wan=False
[2022-11-22 07:07:21]  checkinputsize=True
[2022-11-22 07:07:21]  checksum={'adler32': '42ca3661'}
[2022-11-22 07:07:21]  dataset=hc_test.gangarbt.hc20247452.tid1184.BOINC-TEST.23
[2022-11-22 07:07:21]  ddm_activity=['write_lan', 'write_wan']
[2022-11-22 07:07:21]  ddmendpoint=NDGF-T1_DATADISK
[2022-11-22 07:07:21]  direct_access_lan=False
[2022-11-22 07:07:21]  direct_access_wan=False
[2022-11-22 07:07:21]  domain=
[2022-11-22 07:07:21]  filesize=154393
[2022-11-22 07:07:21]  filetype=log
[2022-11-22 07:07:21]  guid=e5faf5be-08d3-42e1-a1bb-2b7a1e3c51c3
[2022-11-22 07:07:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2022-11-22 07:07:21]  is_tar=False
[2022-11-22 07:07:21]  lfn=8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz
[2022-11-22 07:07:21]  mtime=0
[2022-11-22 07:07:21]  protocol_id=None
[2022-11-22 07:07:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2022-11-22 07:07:21]  replicas=None
[2022-11-22 07:07:21]  scope=hc_test
[2022-11-22 07:07:21]  status=None
[2022-11-22 07:07:21]  status_code=0
[2022-11-22 07:07:21]  storage_token=
[2022-11-22 07:07:21]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz
[2022-11-22 07:07:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/d3/b1/8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz
[2022-11-22 07:07:21]  workdir=None
[2022-11-22 07:07:21] ]
[2022-11-22 07:07:21] 2022-11-22 12:06:37,285 | INFO     | transferring file 8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz from /var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece
[2022-11-22 07:07:21] 2022-11-22 12:06:37,286 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838/8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz /var/l
[2022-11-22 07:07:21] 2022-11-22 12:06:37,296 | INFO     | Adding to output.list: 8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/d3/b1/8a
[2022-11-22 07:07:21] 2022-11-22 12:06:37,297 | INFO     | executing command: ps aux -q 1301096
[2022-11-22 07:07:21] 2022-11-22 12:06:37,308 | INFO     | summary of transferred files:
[2022-11-22 07:07:21] 2022-11-22 12:06:37,309 | INFO     |  -- lfn=8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz, status_code=0, status=transferred
[2022-11-22 07:07:21] 2022-11-22 12:06:37,309 | INFO     | stage-out finished correctly
[2022-11-22 07:07:21] 2022-11-22 12:06:37,710 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2022-11-22 07:07:21] 2022-11-22 12:06:40,637 | INFO     | job 5515971838 has state=finished
[2022-11-22 07:07:21] 2022-11-22 12:06:40,637 | INFO     | preparing for final server update for job 5515971838 in state='finished'
[2022-11-22 07:07:21] 2022-11-22 12:06:40,638 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2022-11-22 07:07:21] 2022-11-22 12:06:40,638 | INFO     | job 5515971838 has finished - writing final server update
[2022-11-22 07:07:21] 2022-11-22 12:06:40,639 | WARNING  | wrong length of table data, x=[], y=[] (must be same and length>=4)
[2022-11-22 07:07:21] 2022-11-22 12:06:40,640 | INFO     | total number of processed events: 2 (read)
[2022-11-22 07:07:21] 2022-11-22 12:06:40,664 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2022-11-22 07:07:21] 2022-11-22 12:06:40,688 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-5515971838/memory_monitor_summary.json (trf name=prmon)
[2022-11-22 07:07:21] 2022-11-22 12:06:40,689 | INFO     | memory information not available: 'Max'
[2022-11-22 07:07:21] 2022-11-22 12:06:40,689 | INFO     | ..............................
[2022-11-22 07:07:21] 2022-11-22 12:06:40,689 | INFO     | . Timing measurements:
[2022-11-22 07:07:21] 2022-11-22 12:06:40,689 | INFO     | . get job = 0 s
[2022-11-22 07:07:21] 2022-11-22 12:06:40,689 | INFO     | . initial setup = 2 s
[2022-11-22 07:07:21] 2022-11-22 12:06:40,690 | INFO     | . payload setup = 5 s
[2022-11-22 07:07:21] 2022-11-22 12:06:40,690 | INFO     | . stage-in = 0 s
[2022-11-22 07:07:21] 2022-11-22 12:06:40,690 | INFO     | . payload execution = 722 s
[2022-11-22 07:07:21] 2022-11-22 12:06:40,690 | INFO     | . stage-out = 0 s
[2022-11-22 07:07:21] 2022-11-22 12:06:40,690 | INFO     | ..............................
[2022-11-22 07:07:21] 2022-11-22 12:06:41,133 | INFO     | 
[2022-11-22 07:07:21] 2022-11-22 12:06:41,133 | INFO     | job summary report
[2022-11-22 07:07:21] 2022-11-22 12:06:41,133 | INFO     | --------------------------------------------------
[2022-11-22 07:07:21] 2022-11-22 12:06:41,133 | INFO     | PanDA job id: 5515971838
[2022-11-22 07:07:21] 2022-11-22 12:06:41,133 | INFO     | task id: NULL
[2022-11-22 07:07:21] 2022-11-22 12:06:41,133 | INFO     | errors: (none)
[2022-11-22 07:07:21] 2022-11-22 12:06:41,133 | INFO     | status: LOG_TRANSFER = DONE 
[2022-11-22 07:07:21] 2022-11-22 12:06:41,133 | INFO     | pilot state: finished 
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | transexitcode: 0
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | exeerrorcode: 0
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | exeerrordiag: 
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | exitcode: 0
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | exitmsg: OK
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | cpuconsumptiontime: 473 s
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | nevents: 2
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | neventsw: 0
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | pid: 1321338
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | pgrp: 1196186
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | corecount: 5
[2022-11-22 07:07:21] 2022-11-22 12:06:41,134 | INFO     | event service: False
[2022-11-22 07:07:21] 2022-11-22 12:06:41,135 | INFO     | sizes: {0: 2573243, 1: 2573449, 11: 2573477, 728: 2594211, 729: 2603379, 732: 2604225}
[2022-11-22 07:07:21] 2022-11-22 12:06:41,135 | INFO     | --------------------------------------------------
[2022-11-22 07:07:21] 2022-11-22 12:06:41,135 | INFO     | 
[2022-11-22 07:07:21] 2022-11-22 12:06:41,135 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2022-11-22 07:07:21] 2022-11-22 12:06:41,147 | INFO     | queue jobs had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,148 | INFO     | queue payloads had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,148 | INFO     | queue data_in had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,148 | INFO     | queue data_out had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,149 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,150 | INFO     | queue completed_jobids has 1 job(s)
[2022-11-22 07:07:21] 2022-11-22 12:06:41,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,150 | INFO     | queue messages had 0 job(s) [purged]
[2022-11-22 07:07:21] 2022-11-22 12:06:41,150 | INFO     | job 5515971838 has completed (purged errors)
[2022-11-22 07:07:21] 2022-11-22 12:06:41,150 | INFO     | overall cleanup function is called
[2022-11-22 07:07:21] 2022-11-22 12:06:42,158 | INFO     | --- collectZombieJob: --- 10, [1321338]
[2022-11-22 07:07:21] 2022-11-22 12:06:42,158 | INFO     | zombie collector trying to kill pid 1321338
[2022-11-22 07:07:21] 2022-11-22 12:06:42,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2022-11-22 07:07:21] 2022-11-22 12:06:43,164 | INFO     | collected zombie processes
[2022-11-22 07:07:21] 2022-11-22 12:06:43,164 | INFO     | will now attempt to kill all subprocesses of pid=1321338
[2022-11-22 07:07:21] 2022-11-22 12:06:43,216 | INFO     | process IDs to be killed: [1321338] (in reverse order)
[2022-11-22 07:07:21] 2022-11-22 12:06:43,256 | WARNING  | found no corresponding commands to process id(s)
[2022-11-22 07:07:21] 2022-11-22 12:06:43,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2022-11-22 07:07:21] 2022-11-22 12:06:43,256 | INFO     | ready for new job
[2022-11-22 07:07:21] 2022-11-22 12:06:43,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2022-11-22 07:07:21] 2022-11-22 12:06:43,257 | INFO     | *****************************************
[2022-11-22 07:07:21] 2022-11-22 12:06:43,257 | INFO     | ***  PanDA Pilot version 3.4.0 (118)  ***
[2022-11-22 07:07:21] 2022-11-22 12:06:43,257 | INFO     | *****************************************
[2022-11-22 07:07:21] 2022-11-22 12:06:43,257 | INFO     | 
[2022-11-22 07:07:21] 2022-11-22 12:06:43,280 | INFO     | architecture information:
[2022-11-22 07:07:21] 2022-11-22 12:06:43,329 | INFO     | 
[2022-11-22 07:07:21] LSB Version:	:core-4.1-amd64:core-4.1-noarch
[2022-11-22 07:07:21] Distributor ID:	CentOS
[2022-11-22 07:07:21] Description:	CentOS Linux release 7.9.2009 (Core)
[2022-11-22 07:07:21] Release:	7.9.2009
[2022-11-22 07:07:21] Codename:	Core
[2022-11-22 07:07:21] 2022-11-22 12:06:43,329 | INFO     | *****************************************
[2022-11-22 07:07:21] 2022-11-22 12:06:43,832 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2022-11-22 07:07:21] 2022-11-22 12:06:43,848 | INFO     | sufficient remaining disk space (121206996992 B)
[2022-11-22 07:07:21] 2022-11-22 12:06:43,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2022-11-22 07:07:21] 2022-11-22 12:06:43,848 | INFO     | [job] retrieve thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:43,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2022-11-22 07:07:21] 2022-11-22 12:06:43,848 | WARNING  | aborting monitor loop since graceful_stop has been set
[2022-11-22 07:07:21] 2022-11-22 12:06:43,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2022-11-22 07:07:21] 2022-11-22 12:06:43,849 | INFO     | [monitor] control thread has ended
[2022-11-22 07:07:21] 2022-11-22 12:06:44,223 | INFO     | [job] control thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,310 | INFO     | [data] control thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,358 | INFO     | [payload] execute_payloads thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,398 | INFO     | [job] create_data_payload thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,546 | INFO     | [payload] validate_pre thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,583 | INFO     | [job] validate thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,778 | INFO     | [data] copytool_in thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,849 | INFO     | [data] copytool_out thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,918 | INFO     | [payload] validate_post thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:44,945 | INFO     | [payload] control thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:45,301 | INFO     | [payload] failed_post thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:45,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2022-11-22 07:07:21] 2022-11-22 12:06:45,766 | INFO     | [job] queue monitor thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:46,849 | INFO     | [data] queue_monitor thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:06:54,598 | INFO     | job.realtimelogging is not enabled
[2022-11-22 07:07:21] 2022-11-22 12:06:54,598 | INFO     | [payload] run_realtimelog thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:07:20,575 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
[2022-11-22 07:07:21] 2022-11-22 12:07:20,575 | INFO     | [job] job monitor thread has finished
[2022-11-22 07:07:21] 2022-11-22 12:07:21,496 | INFO     | end of generic workflow (traces error code: 0)
[2022-11-22 07:07:21] 2022-11-22 12:07:21,496 | INFO     | traces error code: 0
[2022-11-22 07:07:21] 2022-11-22 12:07:21,496 | INFO     | pilot has finished
[2022-11-22 07:07:21] 2022-11-22 12:07:21,531 [wrapper] ==== pilot stdout END ====
[2022-11-22 07:07:21] 2022-11-22 12:07:21,533 [wrapper] ==== wrapper stdout RESUME ====
[2022-11-22 07:07:21] 2022-11-22 12:07:21,535 [wrapper] pilotpid: 1301096
[2022-11-22 07:07:21] 2022-11-22 12:07:21,537 [wrapper] Pilot exit status: 0
[2022-11-22 07:07:21] 2022-11-22 12:07:21,542 [wrapper] pandaids: 5515971838
[2022-11-22 07:07:21] 2022-11-22 12:07:21,546 [wrapper] apfmon messages muted
[2022-11-22 07:07:21] 2022-11-22 12:07:21,548 [wrapper] Test setup, not cleaning
[2022-11-22 07:07:21] 2022-11-22 12:07:21,549 [wrapper] ==== wrapper stdout END ====
[2022-11-22 07:07:21] 2022-11-22 12:07:21,551 [wrapper] ==== wrapper stderr END ====
[2022-11-22 07:07:21] 2022-11-22 12:07:21,554 [wrapper] wrapperexiting ec=0, duration=793
[2022-11-22 07:07:21] 2022-11-22 12:07:21,556 [wrapper] apfmon messages muted
[2022-11-22 07:07:21]  *** Error codes and diagnostics ***
[2022-11-22 07:07:21]     "exeErrorCode": 0,
[2022-11-22 07:07:21]     "exeErrorDiag": "",
[2022-11-22 07:07:21]     "pilotErrorCode": 0,
[2022-11-22 07:07:21]     "pilotErrorDiag": "",
[2022-11-22 07:07:21]  *** Listing of results directory ***
[2022-11-22 07:07:21] total 43820
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc   379728 Nov 22 02:22 pilot3.tar.gz
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc     4540 Nov 22 02:25 queuedata.json
[2022-11-22 07:07:21] -rwx------ 1 boinc boinc    26318 Nov 22 02:27 runpilot2-wrapper.sh
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc      107 Nov 22 06:54 wrapper_26015_x86_64-pc-linux-gnu
[2022-11-22 07:07:21] -rwxr-xr-x 1 boinc boinc     8273 Nov 22 06:54 run_atlas
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc      112 Nov 22 06:54 job.xml
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc     8889 Nov 22 06:54 init_data.xml
[2022-11-22 07:07:21] -rw-r--r-- 2 boinc boinc 37960264 Nov 22 06:54 EVNT.04972714._000040.pool.root.1
[2022-11-22 07:07:21] -rw-r--r-- 2 boinc boinc    17927 Nov 22 06:54 start_atlas.sh
[2022-11-22 07:07:21] drwxrwx--x 2 boinc boinc     4096 Nov 22 06:54 shared
[2022-11-22 07:07:21] -rw-r--r-- 2 boinc boinc   391215 Nov 22 06:54 input.tar.gz
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc        0 Nov 22 06:54 boinc_lockfile
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc     2802 Nov 22 06:54 pandaJob.out
[2022-11-22 07:07:21] -rw------- 1 boinc boinc      416 Nov 22 06:54 setup.sh.local
[2022-11-22 07:07:21] -rw------- 1 boinc boinc  1029462 Nov 22 06:54 agis_schedconf.cvmfs.json
[2022-11-22 07:07:21] -rw------- 1 boinc boinc  1729337 Nov 22 06:54 agis_ddmendpoints.agis.ALL.json
[2022-11-22 07:07:21] drwx------ 4 boinc boinc     4096 Nov 22 06:54 pilot3
[2022-11-22 07:07:21] -rw------- 1 boinc boinc      281 Nov 22 07:04 memory_monitor_summary.json
[2022-11-22 07:07:21] -rw------- 1 boinc boinc  1331852 Nov 22 07:06 output.1.8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.pool.root
[2022-11-22 07:07:21] -rw------- 1 boinc boinc   154393 Nov 22 07:06 8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log.tgz
[2022-11-22 07:07:21] -rw------- 1 boinc boinc     6915 Nov 22 07:06 heartbeat.json
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc      533 Nov 22 07:06 boinc_task_state.xml
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc     8192 Nov 22 07:07 boinc_mmap_file
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc       24 Nov 22 07:07 wrapper_checkpoint.txt
[2022-11-22 07:07:21] -rw------- 1 boinc boinc     2974 Nov 22 07:07 pilotlog.txt
[2022-11-22 07:07:21] -rw------- 1 boinc boinc    88298 Nov 22 07:07 8a6e718d-c92a-4ece-9644-0006492688375-1669102029_98767.1.job.log
[2022-11-22 07:07:21] -rw------- 1 boinc boinc      512 Nov 22 07:07 output.list
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc      796 Nov 22 07:07 runtime_log
[2022-11-22 07:07:21] -rw------- 1 boinc boinc  1597440 Nov 22 07:07 result.tar.gz
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc    11281 Nov 22 07:07 runtime_log.err
[2022-11-22 07:07:21] -rw------- 1 boinc boinc      624 Nov 22 07:07 kCjKDmercH2n7Olcko1bjSoqABFKDmABFKDmFymXDmcgOKDmir5x1n.diag
[2022-11-22 07:07:21] -rw-r--r-- 1 boinc boinc    22147 Nov 22 07:07 stderr.txt
[2022-11-22 07:07:21] HITS file was successfully produced:
[2022-11-22 07:07:21] -rw------- 1 boinc boinc 1331852 Nov 22 07:06 shared/HITS.pool.root.1
[2022-11-22 07:07:21]  *** Contents of shared directory: ***
[2022-11-22 07:07:21] total 40340
[2022-11-22 07:07:21] -rw-r--r-- 2 boinc boinc 37960264 Nov 22 06:54 ATLAS.root_0
[2022-11-22 07:07:21] -rw-r--r-- 2 boinc boinc    17927 Nov 22 06:54 start_atlas.sh
[2022-11-22 07:07:21] -rw-r--r-- 2 boinc boinc   391215 Nov 22 06:54 input.tar.gz
[2022-11-22 07:07:21] -rw------- 1 boinc boinc  1331852 Nov 22 07:06 HITS.pool.root.1
[2022-11-22 07:07:21] -rw------- 1 boinc boinc  1597440 Nov 22 07:07 result.tar.gz
07:07:22 (1282753): run_atlas exited; CPU time 462.657130
07:07:22 (1282753): called boinc_finish(0)

</stderr_txt>
]]>

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