Name | 0hyKDmbPIV2n7Olcko1bjSoqABFKDmABFKDmgZyRDmILKKDmN9Gqqn_0 |
Workunit | 2267719 |
Created | 30 Dec 2022, 0:26:48 UTC |
Sent | 30 Dec 2022, 0:33:51 UTC |
Report deadline | 6 Jan 2023, 0:33:51 UTC |
Received | 30 Dec 2022, 0:50:03 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4008 |
Run time | 15 min 54 sec |
CPU time | 10 min 59 sec |
Validate state | Valid |
Credit | 16.71 |
Device peak FLOPS | 3.51 GFLOPS |
Application version | ATLAS Simulation v1.25 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.41 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 38.85 MB |
<core_client_version>7.16.1</core_client_version> <![CDATA[ <stderr_txt> 01:34:00 (18713): wrapper (7.7.26015): starting 01:34:00 (18713): wrapper: running run_atlas (--nthreads 1) [2022-12-30 01:34:00] Arguments: --nthreads 1 [2022-12-30 01:34:00] Threads: 1 [2022-12-30 01:34:00] Checking for CVMFS [2022-12-30 01:34:01] Probing /cvmfs/atlas.cern.ch... OK [2022-12-30 01:34:12] Probing /cvmfs/atlas-condb.cern.ch... OK [2022-12-30 01:34:12] Running cvmfs_config stat atlas.cern.ch [2022-12-30 01:34:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2022-12-30 01:34:12] 2.6.3.0 2903 131 52276 113979 3 80 2472264 2816000 689 65024 0 433702 99.979 21327 172 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1 [2022-12-30 01:34:12] CVMFS is ok [2022-12-30 01:34:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2022-12-30 01:34:12] Checking for apptainer binary... [2022-12-30 01:34:12] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin) [2022-12-30 01:34:12] apptainer is not installed, using version from CVMFS [2022-12-30 01:34:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2022-12-30 01:34:15] HPi7COS7 [2022-12-30 01:34:15] apptainer works [2022-12-30 01:34:15] Starting ATLAS job with PandaID=5708109560 [2022-12-30 01:34:15] Try creating a directory in /tmp [2022-12-30 01:34:15] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX [2022-12-30 01:34:15] /tmp/tmp.e9s3q [2022-12-30 01:34:17] Try creating a directory in /var/tmp [2022-12-30 01:34:17] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX [2022-12-30 01:34:17] /var/tmp/tmp.r4Pw7 [2022-12-30 01:34:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2022-12-30 01:49:53] *** The last 200 lines of the pilot log: *** [2022-12-30 01:49:53] 2022-12-30 00:49:37,600 | DEBUG | pilot.control.job | send_state | REACHED_MAXTIME=None [2022-12-30 01:49:53] 2022-12-30 00:49:37,601 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2022-12-30 01:49:53] 2022-12-30 00:49:37,601 | INFO | pilot.control.job | is_final_update | job 5708109560 has finished - writing final server update [2022-12-30 01:49:53] 2022-12-30 00:49:37,601 | DEBUG | pilot.control.job | get_data_structure | state=finished [2022-12-30 01:49:53] 2022-12-30 00:49:37,601 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2022-12-30 01:49:53] 2022-12-30 00:49:37,602 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2022-12-30 01:49:53] 2022-12-30 00:49:37,602 | WARNING | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[1672360862.0, 1672360923.0, 1672360984.0, 1672361045.0, 1672361106.0, [2022-12-30 01:49:53] 2022-12-30 00:49:37,602 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=0.83 nEvents=2 dbTime=20.13 dbData=4274626 workDirSize=849184 eventnumb [2022-12-30 01:49:53] 2022-12-30 00:49:37,602 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2022-12-30 01:49:53] 2022-12-30 00:49:37,603 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2022-12-30 01:49:53] 2022-12-30 00:49:37,632 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/0/PanDA_Pilot-5708109560/memory_monitor_summary.json (trf name=prmo [2022-12-30 01:49:53] 2022-12-30 00:49:37,633 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.0, 'nthreads': 5.928, 'pss': 1239419.0, 'rchar': 72143669.0, [2022-12-30 01:49:53] 2022-12-30 00:49:37,633 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2022-12-30 01:49:53] 2022-12-30 00:49:37,633 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | .............................. [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | . initial setup = 1 s [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | . payload setup = 16 s [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | . payload execution = 822 s [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2022-12-30 01:49:53] 2022-12-30 00:49:37,634 | INFO | pilot.util.timing | timing_report | .............................. [2022-12-30 01:49:53] 2022-12-30 00:49:37,635 | DEBUG | pilot.control.job | send_state | data={'jobId': '5708109560', 'state': 'finished', 'timestamp': '2022-12-30T01:49:37+01:00', 'siteNam [2022-12-30 01:49:53] 2022-12-30 00:49:37,635 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5708109560', 'state': 'finished', 'timestamp': '2022-12-30T01:49:37 [2022-12-30 01:49:53] 2022-12-30 00:49:37,636 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/0/heartbeat.json [2022-12-30 01:49:53] 2022-12-30 00:49:37,766 | INFO | pilot.control.job | make_job_report | [2022-12-30 01:49:53] 2022-12-30 00:49:37,766 | INFO | pilot.control.job | make_job_report | job summary report [2022-12-30 01:49:53] 2022-12-30 00:49:37,766 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | PanDA job id: 5708109560 [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | task id: NULL [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | errors: (none) [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | pilot state: finished [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 719 s [2022-12-30 01:49:53] 2022-12-30 00:49:37,767 | INFO | pilot.control.job | make_job_report | nevents: 2 [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.control.job | make_job_report | pid: 27160 [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.control.job | make_job_report | pgrp: 27160 [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.control.job | make_job_report | corecount: 1 [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.control.job | make_job_report | event service: False [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.control.job | make_job_report | sizes: {0: 2532422, 1: 2532827, 2: 2532827, 12: 2532855, 842: 2554624, 843: 2554623, 844: 2563901, 8 [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.control.job | make_job_report | [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/0: [2022-12-30 01:49:53] [2022-12-30 01:49:53] 2022-12-30 00:49:37,768 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/0 [2022-12-30 01:49:53] 2022-12-30 00:49:37,792 | DEBUG | pilot.control.job | has_job_completed | total 47584 [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 131 Dec 30 01:34 0hyKDmbPIV2n7Olcko1bjSoqABFKDmABFKDmgZyRDmILKKDmN9Gqqn.diag [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 37498453 Dec 30 01:34 EVNT.04972714._000025.pool.root.1 [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1238836 Dec 30 01:49 Hits.hc_20254465.BOINC-TEST.d9f0c995-5c2e-4056-9f40-d55985bf762e_30264.HITS.pool.root [2022-12-30 01:49:53] drwxrwx---. 2 boinc boinc 4096 Dec 30 01:49 PanDA_Pilot-5708109560/ [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1700870 Dec 30 01:35 agis_ddmendpoints.agis.ALL.json [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1038076 Dec 30 01:35 agis_schedconf.cvmfs.json [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 0 Dec 30 01:34 boinc_lockfile [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 8192 Dec 30 01:49 boinc_mmap_file [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 532 Dec 30 01:49 boinc_task_state.xml [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 208117 Dec 30 01:49 d9f0c995-5c2e-4056-9f40-d55985bf762e_30264.job.log [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 164007 Dec 30 01:49 d9f0c995-5c2e-4056-9f40-d55985bf762e_30264.job.log.tgz [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 8083 Dec 30 01:49 heartbeat.json [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 6044 Dec 30 01:34 init_data.xml [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 3196856 Dec 30 01:34 input.tar.gz [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 112 Dec 30 01:34 job.xml [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1017 Dec 30 01:49 memory_monitor_summary.json [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 508 Dec 30 01:49 output.list [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 2701 Dec 30 01:34 pandaJob.out [2022-12-30 01:49:53] drwx------. 5 boinc boinc 4096 Dec 30 01:35 pilot3/ [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 3192978 Dec 30 01:26 pilot3.tar.gz [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 189319 Dec 30 01:49 pilotlog.txt [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 4540 Dec 30 01:26 queuedata.json [2022-12-30 01:49:53] -rwxr-xr-x. 1 boinc boinc 8273 Dec 30 01:34 run_atlas* [2022-12-30 01:49:53] -rwx------. 1 boinc boinc 26316 Dec 30 01:26 runpilot2-wrapper.sh* [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 407 Dec 30 01:34 runtime_log [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 6765 Dec 30 01:34 runtime_log.err [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 464 Dec 30 01:34 setup.sh.local [2022-12-30 01:49:53] drwxrwx--x. 2 boinc boinc 68 Dec 30 01:34 shared/ [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 17782 Dec 30 01:34 start_atlas.sh [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 2422 Dec 30 01:34 stderr.txt [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 107 Dec 30 01:34 wrapper_26015_x86_64-pc-linux-gnu [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 24 Dec 30 01:49 wrapper_checkpoint.txt [2022-12-30 01:49:53] 2022-12-30 00:49:37,792 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,793 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,794 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,794 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2022-12-30 01:49:53] 2022-12-30 00:49:37,794 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,794 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2022-12-30 01:49:53] 2022-12-30 00:49:37,794 | INFO | pilot.control.job | has_job_completed | job 5708109560 has completed (purged errors) [2022-12-30 01:49:53] 2022-12-30 00:49:37,794 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2022-12-30 01:49:53] 2022-12-30 00:49:37,794 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2022-12-30 01:49:53] 2022-12-30 00:49:37,796 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-5708109560 [2022-12-30 01:49:53] 2022-12-30 00:49:38,800 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [27160] [2022-12-30 01:49:53] 2022-12-30 00:49:38,800 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 27160 [2022-12-30 01:49:53] 2022-12-30 00:49:38,800 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2022-12-30 01:49:53] 2022-12-30 00:49:39,805 | INFO | pilot.util.processes | cleanup | collected zombie processes [2022-12-30 01:49:53] 2022-12-30 00:49:39,805 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=27160 [2022-12-30 01:49:53] 2022-12-30 00:49:39,866 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [27160] (in reverse order) [2022-12-30 01:49:53] 2022-12-30 00:49:39,909 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2022-12-30 01:49:53] 2022-12-30 00:49:39,909 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2022-12-30 01:49:53] 2022-12-30 00:49:39,909 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2022-12-30 01:49:53] 2022-12-30 00:49:39,909 | INFO | pilot.control.job | retrieve | ready for new job [2022-12-30 01:49:53] 2022-12-30 00:49:39,910 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2022-12-30 01:49:53] 2022-12-30 00:49:39,910 | INFO | pilot.util.auxiliary | pilot_version_banner | *************************************** [2022-12-30 01:49:53] 2022-12-30 00:49:39,910 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.4.7 (6) *** [2022-12-30 01:49:53] 2022-12-30 00:49:39,910 | INFO | pilot.util.auxiliary | pilot_version_banner | *************************************** [2022-12-30 01:49:53] 2022-12-30 00:49:39,910 | INFO | pilot.util.auxiliary | pilot_version_banner | [2022-12-30 01:49:53] 2022-12-30 00:49:39,911 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM [2022-12-30 01:49:53] 2022-12-30 00:49:39,911 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2022-12-30 01:49:53] 2022-12-30 00:49:39,985 | INFO | pilot.util.auxiliary | display_architecture_info | [2022-12-30 01:49:53] LSB Version: :core-4.1-amd64:core-4.1-noarch [2022-12-30 01:49:53] Distributor ID: CentOS [2022-12-30 01:49:53] Description: CentOS Linux release 7.9.2009 (Core) [2022-12-30 01:49:53] Release: 7.9.2009 [2022-12-30 01:49:53] Codename: Core [2022-12-30 01:49:53] 2022-12-30 00:49:39,985 | INFO | pilot.util.auxiliary | pilot_version_banner | *************************************** [2022-12-30 01:49:53] 2022-12-30 00:49:40,488 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0 [2022-12-30 01:49:53] 2022-12-30 00:49:40,488 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/0 [2022-12-30 01:49:53] 2022-12-30 00:49:40,505 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2022-12-30 01:49:53] /dev/mapper/centos-root 22002 10968 11035 50% /var/lib/boinc/slots/0 [2022-12-30 01:49:53] 2022-12-30 00:49:40,505 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2022-12-30 01:49:53] 2022-12-30 00:49:40,505 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (11571036160 B) [2022-12-30 01:49:53] 2022-12-30 00:49:40,505 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2022-12-30 01:49:53] 2022-12-30 00:49:40,505 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:40,506 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:40,506 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2022-12-30 01:49:53] 2022-12-30 00:49:40,506 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2022-12-30 01:49:53] 2022-12-30 00:49:40,581 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2022-12-30 01:49:53] 2022-12-30 00:49:40,581 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:40,581 | INFO | pilot.control.payload | control | [payload] control thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:40,636 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:40,636 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:40,900 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:40,900 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:40,900 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:40,900 | INFO | pilot.control.job | validate | [job] validate thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:40,983 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2022-12-30 01:49:53] 2022-12-30 00:49:40,983 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:40,983 | INFO | pilot.control.data | control | [data] control thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:41,040 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2022-12-30 01:49:53] 2022-12-30 00:49:41,277 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:41,277 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:41,277 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:41,277 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:41,331 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:41,331 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:41,549 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2022-12-30 01:49:53] 2022-12-30 00:49:41,549 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:41,549 | INFO | pilot.control.job | control | [job] control thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:41,660 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2022-12-30 01:49:53] 2022-12-30 00:49:41,879 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:41,879 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:42,049 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:42,049 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:42,783 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2022-12-30 01:49:53] 2022-12-30 00:49:42,783 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:42,783 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:44,663 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:44,663 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:45,367 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2022-12-30 01:49:53] 2022-12-30 00:49:45,367 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:45,367 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:52,161 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2022-12-30 01:49:53] 2022-12-30 00:49:52,161 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2022-12-30 01:49:53] 2022-12-30 00:49:52,161 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2022-12-30 01:49:53] 2022-12-30 00:49:52,161 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2022-12-30 01:49:53] 2022-12-30 00:49:52,161 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2022-12-30 01:49:53] 2022-12-30 00:49:52,407 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2022-12-30 01:49:53] 2022-12-30 00:49:52,407 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2022-12-30 01:49:53] 2022-12-30 00:49:52,407 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2022-12-30 01:49:53] 2022-12-30 00:49:52,408 | INFO | root | wrap_up | traces error code: 0 [2022-12-30 01:49:53] 2022-12-30 00:49:52,408 | INFO | root | wrap_up | pilot has finished [2022-12-30 01:49:53] 2022-12-30 00:49:52,459 [wrapper] ==== pilot stdout END ==== [2022-12-30 01:49:53] 2022-12-30 00:49:52,464 [wrapper] ==== wrapper stdout RESUME ==== [2022-12-30 01:49:53] 2022-12-30 00:49:52,468 [wrapper] pilotpid: 24103 [2022-12-30 01:49:53] 2022-12-30 00:49:52,472 [wrapper] Pilot exit status: 0 [2022-12-30 01:49:53] 2022-12-30 00:49:52,486 [wrapper] pandaids: 5708109560 [2022-12-30 01:49:53] 2022-12-30 00:49:52,495 [wrapper] apfmon messages muted [2022-12-30 01:49:53] 2022-12-30 00:49:52,499 [wrapper] Test setup, not cleaning [2022-12-30 01:49:53] 2022-12-30 00:49:52,503 [wrapper] ==== wrapper stdout END ==== [2022-12-30 01:49:53] 2022-12-30 00:49:52,507 [wrapper] ==== wrapper stderr END ==== [2022-12-30 01:49:53] 2022-12-30 00:49:52,515 [wrapper] wrapperexiting ec=0, duration=933 [2022-12-30 01:49:53] 2022-12-30 00:49:52,520 [wrapper] apfmon messages muted [2022-12-30 01:49:53] *** Error codes and diagnostics *** [2022-12-30 01:49:53] "exeErrorCode": 0, [2022-12-30 01:49:53] "exeErrorDiag": "", [2022-12-30 01:49:53] "pilotErrorCode": 0, [2022-12-30 01:49:53] "pilotErrorDiag": "", [2022-12-30 01:49:53] *** Listing of results directory *** [2022-12-30 01:49:53] insgesamt 47732 [2022-12-30 01:49:53] -rwx------. 1 boinc boinc 26316 30. Dez 01:26 runpilot2-wrapper.sh [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 4540 30. Dez 01:26 queuedata.json [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 3192978 30. Dez 01:26 pilot3.tar.gz [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 107 30. Dez 01:34 wrapper_26015_x86_64-pc-linux-gnu [2022-12-30 01:49:53] -rwxr-xr-x. 1 boinc boinc 8273 30. Dez 01:34 run_atlas [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 112 30. Dez 01:34 job.xml [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 17782 30. Dez 01:34 start_atlas.sh [2022-12-30 01:49:53] drwxrwx--x. 2 boinc boinc 68 30. Dez 01:34 shared [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 3196856 30. Dez 01:34 input.tar.gz [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 6044 30. Dez 01:34 init_data.xml [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 37498453 30. Dez 01:34 EVNT.04972714._000025.pool.root.1 [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 0 30. Dez 01:34 boinc_lockfile [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 2701 30. Dez 01:34 pandaJob.out [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 464 30. Dez 01:34 setup.sh.local [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1038076 30. Dez 01:35 agis_schedconf.cvmfs.json [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1700870 30. Dez 01:35 agis_ddmendpoints.agis.ALL.json [2022-12-30 01:49:53] drwx------. 5 boinc boinc 4096 30. Dez 01:35 pilot3 [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1238836 30. Dez 01:49 Hits.hc_20254465.BOINC-TEST.d9f0c995-5c2e-4056-9f40-d55985bf762e_30264.HITS.pool.root [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1017 30. Dez 01:49 memory_monitor_summary.json [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 164007 30. Dez 01:49 d9f0c995-5c2e-4056-9f40-d55985bf762e_30264.job.log.tgz [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 8083 30. Dez 01:49 heartbeat.json [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 532 30. Dez 01:49 boinc_task_state.xml [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 8192 30. Dez 01:49 boinc_mmap_file [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 24 30. Dez 01:49 wrapper_checkpoint.txt [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 9046 30. Dez 01:49 pilotlog.txt [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 225211 30. Dez 01:49 d9f0c995-5c2e-4056-9f40-d55985bf762e_30264.job.log [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 510 30. Dez 01:49 output.list [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 680 30. Dez 01:49 runtime_log [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 409600 30. Dez 01:49 result.tar.gz [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 10554 30. Dez 01:49 runtime_log.err [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 630 30. Dez 01:49 0hyKDmbPIV2n7Olcko1bjSoqABFKDmABFKDmgZyRDmILKKDmN9Gqqn.diag [2022-12-30 01:49:53] -rw-r--r--. 1 boinc boinc 31286 30. Dez 01:49 stderr.txt [2022-12-30 01:49:53] HITS file was successfully produced: [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1238836 30. Dez 01:49 shared/HITS.pool.root.1 [2022-12-30 01:49:53] *** Contents of shared directory: *** [2022-12-30 01:49:53] insgesamt 41376 [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 17782 30. Dez 01:34 start_atlas.sh [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 3196856 30. Dez 01:34 input.tar.gz [2022-12-30 01:49:53] -rw-r--r--. 2 boinc boinc 37498453 30. Dez 01:34 ATLAS.root_0 [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 1238836 30. Dez 01:49 HITS.pool.root.1 [2022-12-30 01:49:53] -rw-------. 1 boinc boinc 409600 30. Dez 01:49 result.tar.gz 01:49:54 (18713): run_atlas exited; CPU time 699.360610 01:49:54 (18713): called boinc_finish(0) </stderr_txt> ]]>
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