Name | g2hLDmH3Ma2n7Olcko1bjSoqABFKDmABFKDmgZyRDm9ILKDmB30wmn_1 |
Workunit | 2271175 |
Created | 13 Jan 2023, 1:36:32 UTC |
Sent | 13 Jan 2023, 1:38:21 UTC |
Report deadline | 20 Jan 2023, 1:38:21 UTC |
Received | 13 Jan 2023, 1:51:48 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4721 |
Run time | 12 min 23 sec |
CPU time | 10 min 12 sec |
Validate state | Valid |
Credit | 32.28 |
Device peak FLOPS | 6.86 GFLOPS |
Application version | ATLAS Simulation v1.25 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.60 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 38.94 MB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 02:38:47 (1265257): wrapper (7.7.26015): starting 02:38:47 (1265257): wrapper: running run_atlas (--nthreads 1) [2023-01-13 02:38:48] Arguments: --nthreads 1 [2023-01-13 02:38:48] Threads: 1 [2023-01-13 02:38:48] Checking for CVMFS [2023-01-13 02:38:49] Probing /cvmfs/atlas.cern.ch... OK [2023-01-13 02:38:52] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-01-13 02:38:52] Running cvmfs_config stat atlas.cern.ch [2023-01-13 02:38:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-01-13 02:38:55] 2.10.0.0 1253114 6 38612 114492 1 91 2938789 4096000 0 130560 0 46060 99.996 881 503 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1 [2023-01-13 02:38:55] CVMFS is ok [2023-01-13 02:38:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-01-13 02:38:55] Checking for apptainer binary... [2023-01-13 02:38:55] Using apptainer found in PATH at /usr/bin/apptainer [2023-01-13 02:38:55] Running /usr/bin/apptainer --version [2023-01-13 02:38:57] apptainer version 1.1.4-2.el9 [2023-01-13 02:38:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-01-13 02:39:00] P620-CentOS9 [2023-01-13 02:39:00] apptainer works [2023-01-13 02:39:01] Starting ATLAS job with PandaID=5717826802 [2023-01-13 02:39:01] Try creating a directory in /tmp [2023-01-13 02:39:01] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/57 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX [2023-01-13 02:39:01] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system [2023-01-13 02:39:01] mktemp /tmp failed [2023-01-13 02:39:01] Try creating a directory in /var/tmp [2023-01-13 02:39:01] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/57 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX [2023-01-13 02:39:01] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system [2023-01-13 02:39:01] mktemp /var/tmp failed [2023-01-13 02:39:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/57 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-01-13 02:51:07] *** The last 200 lines of the pilot log: *** [2023-01-13 02:51:07] 2023-01-13 01:50:52,483 | DEBUG | pilot.control.job | send_state | REACHED_MAXTIME=None [2023-01-13 02:51:07] 2023-01-13 01:50:52,483 | INFO | pilot.control.job | send_state | pilot will not update the server (heartbeat message will be written to file) [2023-01-13 02:51:07] 2023-01-13 01:50:52,483 | INFO | pilot.control.job | is_final_update | job 5717826802 has finished - writing final server update [2023-01-13 02:51:07] 2023-01-13 01:50:52,484 | DEBUG | pilot.control.job | get_data_structure | state=finished [2023-01-13 02:51:07] 2023-01-13 01:50:52,484 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics_string | job definition core count: 1 [2023-01-13 02:51:07] 2023-01-13 01:50:52,484 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted [2023-01-13 02:51:07] 2023-01-13 01:50:52,484 | WARNING | pilot.api.analytics | get_fitted_data | wrong length of table data, x=[1673574280.0, 1673574341.0, 1673574402.0, 1673574463.0], y=[1739815.0 [2023-01-13 02:51:07] 2023-01-13 01:50:52,484 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=0.89 nEvents=2 dbTime=9.43 dbData=4274626 workDirSize=849222 eventnumbe [2023-01-13 02:51:07] 2023-01-13 01:50:52,485 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read) [2023-01-13 02:51:07] 2023-01-13 01:50:52,485 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-01-13 02:51:07] 2023-01-13 01:50:52,497 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/57/PanDA_Pilot-5717826802/memory_monitor_summary.json (trf name=prm [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.909, 'nthreads': 5.818, 'pss': 1488223.0, 'rchar': 92503690. [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | .............................. [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | . initial setup = 7 s [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | . payload setup = 4 s [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | . payload execution = 671 s [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | . stage-out = 5 s [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | INFO | pilot.util.timing | timing_report | .............................. [2023-01-13 02:51:07] 2023-01-13 01:50:52,498 | DEBUG | pilot.control.job | send_state | data={'jobId': '5717826802', 'state': 'finished', 'timestamp': '2023-01-13T02:50:52+01:00', 'siteNam [2023-01-13 02:51:07] 2023-01-13 01:50:52,499 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5717826802', 'state': 'finished', 'timestamp': '2023-01-13T02:50:52 [2023-01-13 02:51:07] 2023-01-13 01:50:52,499 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/57/heartbeat.json [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | job summary report [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | PanDA job id: 5717826802 [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-01-13 02:51:07] 2023-01-13 01:50:52,632 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 615 s [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | pid: 1273328 [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | pgrp: 1273328 [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | corecount: 1 [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | event service: False [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | sizes: {0: 2537273, 1: 2537479, 11: 2537507, 680: 2558746, 685: 2567798, 686: 2568884} [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.control.job | make_job_report | [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/57: [2023-01-13 02:51:07] [2023-01-13 02:51:07] 2023-01-13 01:50:52,633 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/57 [2023-01-13 02:51:07] 2023-01-13 01:50:52,642 | DEBUG | pilot.control.job | has_job_completed | total 49192 [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 37595586 Jan 13 02:38 EVNT.04972714._000034.pool.root.1 [2023-01-13 02:51:07] drwxrwx---. 2 boinc boinc 4096 Jan 13 02:50 PanDA_Pilot-5717826802/ [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 189888 Jan 13 02:50 a51b0270-613a-4b1d-834a-91847c521455_92332.1.job.log [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 157562 Jan 13 02:50 a51b0270-613a-4b1d-834a-91847c521455_92332.1.job.log.tgz [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 1704033 Jan 13 02:39 agis_ddmendpoints.agis.ALL.json [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 1036019 Jan 13 02:39 agis_schedconf.cvmfs.json [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 0 Jan 13 02:38 boinc_lockfile [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 8192 Jan 13 02:50 boinc_mmap_file [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 532 Jan 13 02:50 boinc_task_state.xml [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 145 Jan 13 02:39 g2hLDmH3Ma2n7Olcko1bjSoqABFKDmABFKDmgZyRDm9ILKDmB30wmn.diag [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 7668 Jan 13 02:50 heartbeat.json [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 6197 Jan 13 02:38 init_data.xml [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 3196847 Jan 13 02:38 input.tar.gz [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 112 Jan 13 02:38 job.xml [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 1009 Jan 13 02:50 memory_monitor_summary.json [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 2927646 Jan 13 02:50 output.1.a51b0270-613a-4b1d-834a-91847c521455_92332.pool.root [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 464 Jan 13 02:50 output.list [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 2651 Jan 13 02:39 pandaJob.out [2023-01-13 02:51:07] drwx------. 5 boinc boinc 4096 Jan 13 02:39 pilot3/ [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 3192978 Jan 13 01:24 pilot3.tar.gz [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 171240 Jan 13 02:50 pilotlog.txt [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 4540 Jan 13 01:24 queuedata.json [2023-01-13 02:51:07] -rwxr-xr-x. 1 boinc boinc 8273 Jan 13 02:38 run_atlas* [2023-01-13 02:51:07] -rwx------. 1 boinc boinc 26316 Jan 13 01:24 runpilot2-wrapper.sh* [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 407 Jan 13 02:39 runtime_log [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 6813 Jan 13 02:39 runtime_log.err [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 464 Jan 13 02:39 setup.sh.local [2023-01-13 02:51:07] drwxrwx--x. 2 boinc boinc 68 Jan 13 02:38 shared/ [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 17790 Jan 13 02:38 start_atlas.sh [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 2427 Jan 13 02:39 stderr.txt [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 107 Jan 13 02:38 wrapper_26015_x86_64-pc-linux-gnu [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 24 Jan 13 02:50 wrapper_checkpoint.txt [2023-01-13 02:51:07] 2023-01-13 01:50:52,642 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | INFO | pilot.control.job | has_job_completed | job 5717826802 has completed (purged errors) [2023-01-13 02:51:07] 2023-01-13 01:50:52,643 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-01-13 02:51:07] 2023-01-13 01:50:52,644 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-01-13 02:51:07] 2023-01-13 01:50:52,645 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/57/PanDA_Pilot-5717826802 [2023-01-13 02:51:07] 2023-01-13 01:50:53,646 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [1273328] [2023-01-13 02:51:07] 2023-01-13 01:50:53,646 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 1273328 [2023-01-13 02:51:07] 2023-01-13 01:50:53,646 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-01-13 02:51:07] 2023-01-13 01:50:54,652 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-01-13 02:51:07] 2023-01-13 01:50:54,652 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=1273328 [2023-01-13 02:51:07] 2023-01-13 01:50:54,682 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [1273328] (in reverse order) [2023-01-13 02:51:07] 2023-01-13 01:50:54,700 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-01-13 02:51:07] 2023-01-13 01:50:54,700 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-01-13 02:51:07] 2023-01-13 01:50:54,700 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-01-13 02:51:07] 2023-01-13 01:50:54,701 | INFO | pilot.control.job | retrieve | ready for new job [2023-01-13 02:51:07] 2023-01-13 01:50:54,701 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-01-13 02:51:07] 2023-01-13 01:50:54,701 | INFO | pilot.util.auxiliary | pilot_version_banner | *************************************** [2023-01-13 02:51:07] 2023-01-13 01:50:54,701 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.4.7 (6) *** [2023-01-13 02:51:07] 2023-01-13 01:50:54,701 | INFO | pilot.util.auxiliary | pilot_version_banner | *************************************** [2023-01-13 02:51:07] 2023-01-13 01:50:54,701 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-01-13 02:51:07] 2023-01-13 01:50:54,701 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM [2023-01-13 02:51:07] 2023-01-13 01:50:54,701 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-01-13 02:51:07] 2023-01-13 01:50:54,735 | INFO | pilot.util.auxiliary | display_architecture_info | [2023-01-13 02:51:07] LSB Version: :core-4.1-amd64:core-4.1-noarch [2023-01-13 02:51:07] Distributor ID: CentOS [2023-01-13 02:51:07] Description: CentOS Linux release 7.9.2009 (Core) [2023-01-13 02:51:07] Release: 7.9.2009 [2023-01-13 02:51:07] Codename: Core [2023-01-13 02:51:07] 2023-01-13 01:50:54,735 | INFO | pilot.util.auxiliary | pilot_version_banner | *************************************** [2023-01-13 02:51:07] 2023-01-13 01:50:55,239 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/57 [2023-01-13 02:51:07] 2023-01-13 01:50:55,239 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/57 [2023-01-13 02:51:07] 2023-01-13 01:50:55,247 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-01-13 02:51:07] /dev/mapper/cs-root 31213 10414 20799 34% /var/lib/boinc/slots/57 [2023-01-13 02:51:07] 2023-01-13 01:50:55,247 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-01-13 02:51:07] 2023-01-13 01:50:55,247 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (21809332224 B) [2023-01-13 02:51:07] 2023-01-13 01:50:55,247 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-01-13 02:51:07] 2023-01-13 01:50:55,247 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:55,247 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:55,247 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2023-01-13 02:51:07] 2023-01-13 01:50:55,247 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-01-13 02:51:07] 2023-01-13 01:50:55,248 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-01-13 02:51:07] 2023-01-13 01:50:55,396 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:55,396 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:55,886 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-01-13 02:51:07] 2023-01-13 01:50:55,887 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:55,887 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:55,971 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:55,971 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:55,971 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:55,971 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:55,971 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:55,971 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:55,972 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:55,972 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:56,058 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:56,059 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:56,070 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-01-13 02:51:07] 2023-01-13 01:50:56,070 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:56,071 | INFO | pilot.control.data | control | [data] control thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:56,143 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:56,143 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:56,248 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:56,248 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:56,581 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-01-13 02:51:07] 2023-01-13 01:50:56,581 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:56,581 | INFO | pilot.control.job | control | [job] control thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:57,572 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-01-13 02:51:07] 2023-01-13 01:50:57,573 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:50:57,573 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-01-13 02:51:07] 2023-01-13 01:50:58,491 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-01-13 02:51:07] 2023-01-13 01:51:01,493 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:51:01,493 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-01-13 02:51:07] 2023-01-13 01:51:06,906 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-01-13 02:51:07] 2023-01-13 01:51:06,906 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-01-13 02:51:07] 2023-01-13 01:51:06,906 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-01-13 02:51:07] 2023-01-13 01:51:06,906 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:51:06,906 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-01-13 02:51:07] 2023-01-13 01:51:07,419 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2023-01-13 02:51:07] 2023-01-13 01:51:07,419 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet [2023-01-13 02:51:07] 2023-01-13 01:51:07,419 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-01-13 02:51:07] 2023-01-13 01:51:07,778 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-01-13 02:51:07] 2023-01-13 01:51:07,778 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-01-13 02:51:07] 2023-01-13 01:51:07,778 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-01-13 02:51:07] 2023-01-13 01:51:07,778 | INFO | root | wrap_up | traces error code: 0 [2023-01-13 02:51:07] 2023-01-13 01:51:07,778 | INFO | root | wrap_up | pilot has finished [2023-01-13 02:51:07] 2023-01-13 01:51:07,826 [wrapper] ==== pilot stdout END ==== [2023-01-13 02:51:07] 2023-01-13 01:51:07,827 [wrapper] ==== wrapper stdout RESUME ==== [2023-01-13 02:51:07] 2023-01-13 01:51:07,828 [wrapper] pilotpid: 1270314 [2023-01-13 02:51:07] 2023-01-13 01:51:07,829 [wrapper] Pilot exit status: 0 [2023-01-13 02:51:07] 2023-01-13 01:51:07,838 [wrapper] pandaids: 5717826802 [2023-01-13 02:51:07] 2023-01-13 01:51:07,840 [wrapper] apfmon messages muted [2023-01-13 02:51:07] 2023-01-13 01:51:07,841 [wrapper] Test setup, not cleaning [2023-01-13 02:51:07] 2023-01-13 01:51:07,842 [wrapper] ==== wrapper stdout END ==== [2023-01-13 02:51:07] 2023-01-13 01:51:07,843 [wrapper] ==== wrapper stderr END ==== [2023-01-13 02:51:07] 2023-01-13 01:51:07,845 [wrapper] wrapperexiting ec=0, duration=726 [2023-01-13 02:51:07] 2023-01-13 01:51:07,846 [wrapper] apfmon messages muted [2023-01-13 02:51:07] *** Error codes and diagnostics *** [2023-01-13 02:51:07] "exeErrorCode": 0, [2023-01-13 02:51:07] "exeErrorDiag": "", [2023-01-13 02:51:07] "pilotErrorCode": 0, [2023-01-13 02:51:07] "pilotErrorDiag": "", [2023-01-13 02:51:07] *** Listing of results directory *** [2023-01-13 02:51:07] insgesamt 52284 [2023-01-13 02:51:07] -rwx------. 1 boinc boinc 26316 13. Jan 01:24 runpilot2-wrapper.sh [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 4540 13. Jan 01:24 queuedata.json [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 3192978 13. Jan 01:24 pilot3.tar.gz [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 107 13. Jan 02:38 wrapper_26015_x86_64-pc-linux-gnu [2023-01-13 02:51:07] -rwxr-xr-x. 1 boinc boinc 8273 13. Jan 02:38 run_atlas [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 112 13. Jan 02:38 job.xml [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 37595586 13. Jan 02:38 EVNT.04972714._000034.pool.root.1 [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 6197 13. Jan 02:38 init_data.xml [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 17790 13. Jan 02:38 start_atlas.sh [2023-01-13 02:51:07] drwxrwx--x. 2 boinc boinc 68 13. Jan 02:38 shared [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 3196847 13. Jan 02:38 input.tar.gz [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 0 13. Jan 02:38 boinc_lockfile [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 2651 13. Jan 02:39 pandaJob.out [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 464 13. Jan 02:39 setup.sh.local [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 1036019 13. Jan 02:39 agis_schedconf.cvmfs.json [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 1704033 13. Jan 02:39 agis_ddmendpoints.agis.ALL.json [2023-01-13 02:51:07] drwx------. 5 boinc boinc 4096 13. Jan 02:39 pilot3 [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 2927646 13. Jan 02:50 output.1.a51b0270-613a-4b1d-834a-91847c521455_92332.pool.root [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 24 13. Jan 02:50 wrapper_checkpoint.txt [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 532 13. Jan 02:50 boinc_task_state.xml [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 1009 13. Jan 02:50 memory_monitor_summary.json [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 157562 13. Jan 02:50 a51b0270-613a-4b1d-834a-91847c521455_92332.1.job.log.tgz [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 7668 13. Jan 02:50 heartbeat.json [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 9041 13. Jan 02:51 pilotlog.txt [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 206968 13. Jan 02:51 a51b0270-613a-4b1d-834a-91847c521455_92332.1.job.log [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 464 13. Jan 02:51 output.list [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 10936 13. Jan 02:51 runtime_log.err [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 748 13. Jan 02:51 runtime_log [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 3307520 13. Jan 02:51 result.tar.gz [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 627 13. Jan 02:51 g2hLDmH3Ma2n7Olcko1bjSoqABFKDmABFKDmgZyRDm9ILKDmB30wmn.diag [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 31269 13. Jan 02:51 stderr.txt [2023-01-13 02:51:07] -rw-r--r--. 1 boinc boinc 8192 13. Jan 02:51 boinc_mmap_file [2023-01-13 02:51:07] HITS file was successfully produced: [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 2927646 13. Jan 02:50 shared/HITS.pool.root.1 [2023-01-13 02:51:07] *** Contents of shared directory: *** [2023-01-13 02:51:07] insgesamt 45952 [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 37595586 13. Jan 02:38 ATLAS.root_0 [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 17790 13. Jan 02:38 start_atlas.sh [2023-01-13 02:51:07] -rw-r--r--. 2 boinc boinc 3196847 13. Jan 02:38 input.tar.gz [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 2927646 13. Jan 02:50 HITS.pool.root.1 [2023-01-13 02:51:07] -rw-------. 1 boinc boinc 3307520 13. Jan 02:51 result.tar.gz 02:51:09 (1265257): run_atlas exited; CPU time 612.965365 02:51:09 (1265257): called boinc_finish(0) </stderr_txt> ]]>
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