| Name | 3p4KDm2Fyo2n7Olcko1bjSoqABFKDmABFKDmgZyRDmnMOKDmBfOjXo_0 |
| Workunit | 2281402 |
| Created | 22 Feb 2023, 6:58:14 UTC |
| Sent | 22 Feb 2023, 6:59:44 UTC |
| Report deadline | 1 Mar 2023, 6:59:44 UTC |
| Received | 22 Feb 2023, 7:41:18 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4809 |
| Run time | 13 min 11 sec |
| CPU time | 1 min 17 sec |
| Validate state | Valid |
| Credit | 8.09 |
| Device peak FLOPS | 8.00 GFLOPS |
| Application version | ATLAS Simulation v1.25 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 971.08 MB |
| Peak swap size | 1.48 GB |
| Peak disk usage | 78.59 MB |
Stderr output
<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
08:27:55 (825911): wrapper (7.7.26015): starting
08:27:55 (825911): wrapper: running run_atlas (--nthreads 8)
[2023-02-22 08:27:55] Arguments: --nthreads 8
[2023-02-22 08:27:55] Threads: 8
[2023-02-22 08:27:55] Checking for CVMFS
[2023-02-22 08:27:56] Probing /cvmfs/atlas.cern.ch... OK
[2023-02-22 08:28:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-02-22 08:28:32] Running cvmfs_config stat atlas.cern.ch
[2023-02-22 08:28:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-02-22 08:28:32] 2.10.0.0 763030 67 46500 115972 0 64 3533320 4096001 0 130560 0 170868 99.990 2887 394 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2023-02-22 08:28:32] CVMFS is ok
[2023-02-22 08:28:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-02-22 08:28:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2023-02-22 08:28:32] Small home clusters do not require a local http proxy but it is suggested if
[2023-02-22 08:28:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-02-22 08:28:32] Further information can be found at the LHC@home message board.
[2023-02-22 08:28:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-02-22 08:28:32] Checking for apptainer binary...
[2023-02-22 08:28:32] apptainer is not installed, using version from CVMFS
[2023-02-22 08:28:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-02-22 08:28:34] UMVB2004
[2023-02-22 08:28:34] apptainer works
[2023-02-22 08:28:34] Set ATHENA_PROC_NUMBER=8
[2023-02-22 08:28:34] Starting ATLAS job with PandaID=5761553966
[2023-02-22 08:28:34] Try creating a directory in /tmp
[2023-02-22 08:28:34] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX
[2023-02-22 08:28:34] /tmp/tmp.WsO4b
[2023-02-22 08:28:35] Try creating a directory in /var/tmp
[2023-02-22 08:28:35] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX
[2023-02-22 08:28:35] /var/tmp/tmp.Mrd93
[2023-02-22 08:28:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-02-22 08:41:04] *** The last 200 lines of the pilot log: ***
[2023-02-22 08:41:04] storage_token=
[2023-02-22 08:41:04] surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/aa85210b-19ed-40ec-8bf1-bda373ec1b1e_82229.1.job.log.tgz
[2023-02-22 08:41:04] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e0/4c/aa85210b-19ed-40ec-8bf1-bda373ec1b1e_82229.1.job.log.tgz
[2023-02-22 08:41:04] workdir=None
[2023-02-22 08:41:04] ]
[2023-02-22 08:41:04] 2023-02-22 07:38:46,962 | INFO | transferring file aa85210b-19ed-40ec-8bf1-bda373ec1b1e_82229.1.job.log.tgz from /var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/aa85210b-19ed-40ec-8bf1-bda373
[2023-02-22 08:41:04] 2023-02-22 07:38:46,962 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/aa85210b-19ed-40ec-8bf1-bda373ec1b1e_82229.1.job.log.tgz /var/lib/boinc-cli
[2023-02-22 08:41:04] 2023-02-22 07:38:47,007 | INFO | Adding to output.list: aa85210b-19ed-40ec-8bf1-bda373ec1b1e_82229.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e0/4c/aa85210b-19ed-
[2023-02-22 08:41:04] 2023-02-22 07:38:47,007 | INFO | executing command: ps aux -q 831383
[2023-02-22 08:41:04] 2023-02-22 07:38:47,135 | INFO | summary of transferred files:
[2023-02-22 08:41:04] 2023-02-22 07:38:47,135 | INFO | -- lfn=aa85210b-19ed-40ec-8bf1-bda373ec1b1e_82229.1.job.log.tgz, status_code=0, status=transferred
[2023-02-22 08:41:04] 2023-02-22 07:38:47,135 | INFO | stage-out finished correctly
[2023-02-22 08:41:04] 2023-02-22 07:38:49,327 | INFO | finished stage-out (of log) for failed payload
[2023-02-22 08:41:04] 2023-02-22 07:38:51,257 | INFO | job 5761553966 has state=failed
[2023-02-22 08:41:04] 2023-02-22 07:38:51,257 | INFO | preparing for final server update for job 5761553966 in state='failed'
[2023-02-22 08:41:04] 2023-02-22 07:38:56,638 | INFO | monitor loop #7: job 0:5761553966 is in state 'failed'
[2023-02-22 08:41:04] 2023-02-22 07:38:56,638 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-02-22 08:41:04] 2023-02-22 07:39:22,711 | INFO | 607.6517527103424s have passed since pilot start
[2023-02-22 08:41:04] 2023-02-22 07:39:58,232 | INFO | monitor loop #8: job 0:5761553966 is in state 'failed'
[2023-02-22 08:41:04] 2023-02-22 07:39:58,232 | INFO | will abort job monitoring soon since job state=failed (job is still in queue)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,722 | INFO | proceeding with final server update
[2023-02-22 08:41:04] 2023-02-22 07:40:46,723 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,723 | INFO | job 5761553966 has failed - writing final server update
[2023-02-22 08:41:04] 2023-02-22 07:40:46,723 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2023-02-22 08:41:04] 2023-02-22 07:40:46,724 | WARNING | format EVNTtoHITS has no such key: dbData
[2023-02-22 08:41:04] 2023-02-22 07:40:46,724 | WARNING | format EVNTtoHITS has no such key: dbTime
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | WARNING | wrong length of table data, x=[1677051337.0, 1677051398.0], y=[837905.0, 977913.0] (must be same and length>=4)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | INFO | payload/TRF did not report the number of read events
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/memory_monitor_summary.json (trf name=prmon)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | extracted standard info from prmon json
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | extracted standard memory fields from prmon json
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | ..............................
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . Timing measurements:
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . get job = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . initial setup = 2 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . payload setup = 30 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . stage-in = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . payload execution = 523 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . stage-out = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | ..............................
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/pilotlog.txt
[2023-02-22 08:41:04] 2023-02-22 07:40:46,854 | WARNING | detected the following tail of warning/fatal messages in the pilot log:
[2023-02-22 08:41:04] - Log from pilotlog.txt -
[2023-02-22 08:41:04] 2023-02-22 07:40:46,723 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2023-02-22 08:41:04] 2023-02-22 07:40:46,724 | WARNING | format EVNTtoHITS has no such key: dbData
[2023-02-22 08:41:04] 2023-02-22 07:40:46,724 | WARNING | format EVNTtoHITS has no such key: dbTime
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | WARNING | wrong length of table data, x=[1677051337.0, 1677051398.0], y=[837905.0, 977913.0] (must be same and length>=4)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | INFO | payload/TRF did not report the number of read events
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/memory_monitor_summary.json (trf name=prmon)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | extracted standard info from prmon json
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | extracted standard memory fields from prmon json
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | ..............................
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . Timing measurements:
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . get job = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . initial setup = 2 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . payload setup = 30 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . stage-in = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . payload execution = 523 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . stage-out = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | ..............................
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/pilotlog.txt
[2023-02-22 08:41:04] 2023-02-22 07:40:46,854 | WARNING |
[2023-02-22 08:41:04] [begin log extracts]
[2023-02-22 08:41:04] - Log from pilotlog.txt -
[2023-02-22 08:41:04] 2023-02-22 07:40:46,723 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2023-02-22 08:41:04] 2023-02-22 07:40:46,724 | WARNING | format EVNTtoHITS has no such key: dbData
[2023-02-22 08:41:04] 2023-02-22 07:40:46,724 | WARNING | format EVNTtoHITS has no such key: dbTime
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | WARNING | wrong length of table data, x=[1677051337.0, 1677051398.0], y=[837905.0, 977913.0] (must be same and length>=4)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | INFO | payload/TRF did not report the number of read events
[2023-02-22 08:41:04] 2023-02-22 07:40:46,725 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/memory_monitor_summary.json (trf name=prmon)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | extracted standard info from prmon json
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | extracted standard memory fields from prmon json
[2023-02-22 08:41:04] 2023-02-22 07:40:46,825 | INFO | ..............................
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . Timing measurements:
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . get job = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . initial setup = 2 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . payload setup = 30 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . stage-in = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . payload execution = 523 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | . stage-out = 0 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | ..............................
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-02-22 08:41:04] 2023-02-22 07:40:46,826 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-5761553966/pilotlog.txt
[2023-02-22 08:41:04] [end log extracts]
[2023-02-22 08:41:04] 2023-02-22 07:40:46,854 | WARNING | pilotErrorCodes = [1305] (will report primary/first error code)
[2023-02-22 08:41:04] 2023-02-22 07:40:46,854 | WARNING | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2023-02-22 08:38:38,254 CRITICAL Transform executor raised TransformValidationExcep
[2023-02-22 08:41:04] 2023-02-22 07:40:46,949 | INFO |
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | job summary report
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | --------------------------------------------------
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | PanDA job id: 5761553966
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | task id: NULL
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2023-02-22 08:38:38,254 CRITICAL Transform executor raised TransformValidationExceptio
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | status: LOG_TRANSFER = DONE
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | pilot state: failed
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | transexitcode: 65
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | exeerrorcode: 65
[2023-02-22 08:41:04] 2023-02-22 07:40:46,950 | INFO | exeerrordiag: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | exitcode: 65
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | exitmsg: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: "Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algo
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | cpuconsumptiontime: 203 s
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | nevents: 0
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | neventsw: 0
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | pid: 834440
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | pgrp: 834440
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | corecount: 8
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | event service: False
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | sizes: {0: 2533258, 1: 2533464, 11: 2533492, 557: 2553991, 558: 2558322, 560: 2558322, 678: 2559300}
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | --------------------------------------------------
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO |
[2023-02-22 08:41:04] 2023-02-22 07:40:46,959 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/2
[2023-02-22 08:41:04] 2023-02-22 07:40:47,080 | INFO | queue jobs had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue payloads had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue data_in had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue data_out had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue completed_jobids has 1 job(s)
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,081 | INFO | queue messages had 0 job(s) [purged]
[2023-02-22 08:41:04] 2023-02-22 07:40:47,082 | INFO | job 5761553966 has completed (purged errors)
[2023-02-22 08:41:04] 2023-02-22 07:40:47,082 | INFO | overall cleanup function is called
[2023-02-22 08:41:04] 2023-02-22 07:40:48,090 | INFO | --- collectZombieJob: --- 10, [834440]
[2023-02-22 08:41:04] 2023-02-22 07:40:48,090 | INFO | zombie collector trying to kill pid 834440
[2023-02-22 08:41:04] 2023-02-22 07:40:48,090 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-02-22 08:41:04] 2023-02-22 07:40:49,096 | INFO | collected zombie processes
[2023-02-22 08:41:04] 2023-02-22 07:40:49,096 | INFO | will now attempt to kill all subprocesses of pid=834440
[2023-02-22 08:41:04] 2023-02-22 07:40:49,270 | INFO | process IDs to be killed: [834440] (in reverse order)
[2023-02-22 08:41:04] 2023-02-22 07:40:49,338 | WARNING | found no corresponding commands to process id(s)
[2023-02-22 08:41:04] 2023-02-22 07:40:49,338 | INFO | Do not look for orphan processes in BOINC jobs
[2023-02-22 08:41:04] 2023-02-22 07:40:49,338 | INFO | ready for new job
[2023-02-22 08:41:04] 2023-02-22 07:40:49,338 | INFO | pilot has finished with previous job - re-establishing logging
[2023-02-22 08:41:04] 2023-02-22 07:40:49,339 | INFO | ***************************************
[2023-02-22 08:41:04] 2023-02-22 07:40:49,339 | INFO | *** PanDA Pilot version 3.4.8 (5) ***
[2023-02-22 08:41:04] 2023-02-22 07:40:49,339 | INFO | ***************************************
[2023-02-22 08:41:04] 2023-02-22 07:40:49,339 | INFO |
[2023-02-22 08:41:04] 2023-02-22 07:40:49,340 | INFO | pilot is running in a VM
[2023-02-22 08:41:04] 2023-02-22 07:40:49,340 | INFO | architecture information:
[2023-02-22 08:41:04] 2023-02-22 07:40:49,639 | INFO |
[2023-02-22 08:41:04] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2023-02-22 08:41:04] Distributor ID: CentOS
[2023-02-22 08:41:04] Description: CentOS Linux release 7.9.2009 (Core)
[2023-02-22 08:41:04] Release: 7.9.2009
[2023-02-22 08:41:04] Codename: Core
[2023-02-22 08:41:04] 2023-02-22 07:40:49,639 | INFO | ***************************************
[2023-02-22 08:41:04] 2023-02-22 07:40:50,140 | INFO | executing command: df -mP /var/lib/boinc-client/slots/2
[2023-02-22 08:41:04] 2023-02-22 07:40:50,214 | INFO | sufficient remaining disk space (38757466112 B)
[2023-02-22 08:41:04] 2023-02-22 07:40:50,214 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-02-22 08:41:04] 2023-02-22 07:40:50,214 | INFO | [job] retrieve thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:50,215 | WARNING | aborting monitor loop since graceful_stop has been set
[2023-02-22 08:41:04] 2023-02-22 07:40:50,215 | INFO | [monitor] control thread has ended
[2023-02-22 08:41:04] 2023-02-22 07:40:50,292 | INFO | [job] control thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:50,374 | INFO | [job] validate thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:50,399 | INFO | [data] copytool_in thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:50,418 | INFO | [payload] validate_pre thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:50,452 | INFO | [job] create_data_payload thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:50,605 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-02-22 08:41:04] 2023-02-22 07:40:50,623 | INFO | [payload] failed_post thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:51,053 | INFO | [data] control thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:51,208 | INFO | [payload] control thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:51,461 | INFO | [payload] execute_payloads thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:51,470 | INFO | [payload] validate_post thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:51,607 | INFO | [data] copytool_out thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:51,956 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-02-22 08:41:04] 2023-02-22 07:40:51,956 | INFO | [job] queue monitor thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:52,679 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-02-22 08:41:04] 2023-02-22 07:40:55,683 | INFO | [data] queue_monitor thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:40:59,837 | WARNING | no jobs in monitored_payloads queue (waited for 61 s)
[2023-02-22 08:41:04] 2023-02-22 07:40:59,837 | INFO | [job] job monitor thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:41:03,131 | INFO | job.realtimelogging is not enabled
[2023-02-22 08:41:04] 2023-02-22 07:41:03,132 | INFO | [payload] run_realtimelog thread has finished
[2023-02-22 08:41:04] 2023-02-22 07:41:04,012 | INFO | end of generic workflow (traces error code: 0)
[2023-02-22 08:41:04] 2023-02-22 07:41:04,012 | INFO | traces error code: 0
[2023-02-22 08:41:04] 2023-02-22 07:41:04,013 | INFO | pilot has finished
[2023-02-22 08:41:04] 2023-02-22 07:41:04,076 [wrapper] ==== pilot stdout END ====
[2023-02-22 08:41:04] 2023-02-22 07:41:04,083 [wrapper] ==== wrapper stdout RESUME ====
[2023-02-22 08:41:04] 2023-02-22 07:41:04,087 [wrapper] pilotpid: 831383
[2023-02-22 08:41:04] 2023-02-22 07:41:04,091 [wrapper] Pilot exit status: 0
[2023-02-22 08:41:04] 2023-02-22 07:41:04,171 [wrapper] pandaids: 5761553966
[2023-02-22 08:41:04] 2023-02-22 07:41:04,184 [wrapper] apfmon messages muted
[2023-02-22 08:41:04] 2023-02-22 07:41:04,190 [wrapper] Test setup, not cleaning
[2023-02-22 08:41:04] 2023-02-22 07:41:04,197 [wrapper] ==== wrapper stdout END ====
[2023-02-22 08:41:04] 2023-02-22 07:41:04,204 [wrapper] ==== wrapper stderr END ====
[2023-02-22 08:41:04] 2023-02-22 07:41:04,223 [wrapper] wrapperexiting ec=0, duration=748
[2023-02-22 08:41:04] 2023-02-22 07:41:04,249 [wrapper] apfmon messages muted
[2023-02-22 08:41:04] *** Error codes and diagnostics ***
[2023-02-22 08:41:04] "exeErrorCode": 65,
[2023-02-22 08:41:04] "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: ISF_Kernel_FullG4; Current Function: unknown\"",
[2023-02-22 08:41:04] "pilotErrorCode": 1305,
[2023-02-22 08:41:04] "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-02-22 08:38:38,254 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm",
[2023-02-22 08:41:04] *** Listing of results directory ***
[2023-02-22 08:41:04] totale 40660
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 386707 feb 22 07:27 pilot3.tar.gz
[2023-02-22 08:41:04] -rwx------ 1 boinc boinc 26447 feb 22 07:58 runpilot2-wrapper.sh
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 3906 feb 22 07:58 queuedata.json
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 107 feb 22 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2023-02-22 08:41:04] -rwxr-xr-x 1 boinc boinc 8273 feb 22 08:27 run_atlas
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 112 feb 22 08:27 job.xml
[2023-02-22 08:41:04] -rw-r--r-- 2 boinc boinc 17762 feb 22 08:27 start_atlas.sh
[2023-02-22 08:41:04] drwxrwx--x 2 boinc boinc 4096 feb 22 08:27 shared
[2023-02-22 08:41:04] -rw-r--r-- 2 boinc boinc 398419 feb 22 08:27 input.tar.gz
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 6175 feb 22 08:27 init_data.xml
[2023-02-22 08:41:04] -rw-r--r-- 2 boinc boinc 37708683 feb 22 08:27 EVNT.04972714._000031.pool.root.1
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 0 feb 22 08:27 boinc_lockfile
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 2757 feb 22 08:28 pandaJob.out
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 416 feb 22 08:28 setup.sh.local
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 902600 feb 22 08:29 agis_schedconf.cvmfs.json
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 1701555 feb 22 08:29 agis_ddmendpoints.agis.ALL.json
[2023-02-22 08:41:04] drwx------ 4 boinc boinc 4096 feb 22 08:29 pilot3
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 530 feb 22 08:34 boinc_task_state.xml
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 995 feb 22 08:38 memory_monitor_summary.json
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 74303 feb 22 08:38 aa85210b-19ed-40ec-8bf1-bda373ec1b1e_82229.1.job.log.tgz
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 8083 feb 22 08:40 heartbeat.json
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 23 feb 22 08:40 wrapper_checkpoint.txt
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 8192 feb 22 08:40 boinc_mmap_file
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 3027 feb 22 08:41 pilotlog.txt
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 83170 feb 22 08:41 aa85210b-19ed-40ec-8bf1-bda373ec1b1e_82229.1.job.log
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 227 feb 22 08:41 output.list
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 686 feb 22 08:41 runtime_log
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 174080 feb 22 08:41 result.tar.gz
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 10228 feb 22 08:41 runtime_log.err
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 620 feb 22 08:41 3p4KDm2Fyo2n7Olcko1bjSoqABFKDmABFKDmgZyRDmnMOKDmBfOjXo.diag
[2023-02-22 08:41:04] -rw-r--r-- 1 boinc boinc 24211 feb 22 08:41 stderr.txt
[2023-02-22 08:41:04] No HITS result produced
[2023-02-22 08:41:04] *** Contents of shared directory: ***
[2023-02-22 08:41:04] totale 37412
[2023-02-22 08:41:04] -rw-r--r-- 2 boinc boinc 17762 feb 22 08:27 start_atlas.sh
[2023-02-22 08:41:04] -rw-r--r-- 2 boinc boinc 398419 feb 22 08:27 input.tar.gz
[2023-02-22 08:41:04] -rw-r--r-- 2 boinc boinc 37708683 feb 22 08:27 ATLAS.root_0
[2023-02-22 08:41:04] -rw------- 1 boinc boinc 174080 feb 22 08:41 result.tar.gz
08:41:06 (825911): run_atlas exited; CPU time 65.390588
08:41:06 (825911): called boinc_finish(0)
</stderr_txt>
]]>
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