| Name | t07MDmiAzo2n7Olcko1bjSoqABFKDmABFKDmgZyRDmzMOKDmyDAdUo_0 |
| Workunit | 2281407 |
| Created | 22 Feb 2023, 7:56:51 UTC |
| Sent | 22 Feb 2023, 7:59:24 UTC |
| Report deadline | 1 Mar 2023, 7:59:24 UTC |
| Received | 22 Feb 2023, 8:28:14 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4809 |
| Run time | 6 min 6 sec |
| CPU time | 41 sec |
| Validate state | Valid |
| Credit | 1.41 |
| Device peak FLOPS | 3.00 GFLOPS |
| Application version | ATLAS Simulation v1.25 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 723.73 MB |
| Peak swap size | 1.42 GB |
| Peak disk usage | 78.51 MB |
Stderr output
<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
09:21:55 (23462): wrapper (7.7.26015): starting
09:21:55 (23462): wrapper: running run_atlas (--nthreads 3)
[2023-02-22 09:21:55] Arguments: --nthreads 3
[2023-02-22 09:21:55] Threads: 3
[2023-02-22 09:21:55] Checking for CVMFS
[2023-02-22 09:21:55] Probing /cvmfs/atlas.cern.ch... OK
[2023-02-22 09:22:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-02-22 09:22:07] Running cvmfs_config stat atlas.cern.ch
[2023-02-22 09:22:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-02-22 09:22:07] 2.10.0.0 2329 22 42276 115973 2 63 3536640 4096001 0 130560 0 57048 99.990 862 26 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 0
[2023-02-22 09:22:07] CVMFS is ok
[2023-02-22 09:22:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-02-22 09:22:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2023-02-22 09:22:07] Small home clusters do not require a local http proxy but it is suggested if
[2023-02-22 09:22:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-02-22 09:22:07] Further information can be found at the LHC@home message board.
[2023-02-22 09:22:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-02-22 09:22:07] Checking for apptainer binary...
[2023-02-22 09:22:07] apptainer is not installed, using version from CVMFS
[2023-02-22 09:22:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-02-22 09:22:08] UMVB2004
[2023-02-22 09:22:08] apptainer works
[2023-02-22 09:22:08] Set ATHENA_PROC_NUMBER=3
[2023-02-22 09:22:08] Starting ATLAS job with PandaID=5761601794
[2023-02-22 09:22:08] Try creating a directory in /tmp
[2023-02-22 09:22:08] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX
[2023-02-22 09:22:08] /tmp/tmp.z9nrM
[2023-02-22 09:22:08] Try creating a directory in /var/tmp
[2023-02-22 09:22:08] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX
[2023-02-22 09:22:09] /var/tmp/tmp.KwpZ5
[2023-02-22 09:22:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-02-22 09:27:58] *** The last 200 lines of the pilot log: ***
[2023-02-22 09:27:58] turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/45/45/42da0d20-cb21-4c09-9fa0-77a277b5f8b6_84695.1.job.log.tgz
[2023-02-22 09:27:58] workdir=None
[2023-02-22 09:27:58] ]
[2023-02-22 09:27:58] 2023-02-22 08:27:36,083 | INFO | transferring file 42da0d20-cb21-4c09-9fa0-77a277b5f8b6_84695.1.job.log.tgz from /var/lib/boinc-client/slots/2/PanDA_Pilot-5761601794/42da0d20-cb21-4c09-9fa0-77a277
[2023-02-22 09:27:58] 2023-02-22 08:27:36,083 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-5761601794/42da0d20-cb21-4c09-9fa0-77a277b5f8b6_84695.1.job.log.tgz /var/lib/boinc-cli
[2023-02-22 09:27:58] 2023-02-22 08:27:36,156 | INFO | Adding to output.list: 42da0d20-cb21-4c09-9fa0-77a277b5f8b6_84695.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/45/45/42da0d20-cb21-
[2023-02-22 09:27:58] 2023-02-22 08:27:36,157 | INFO | executing command: ps aux -q 29071
[2023-02-22 09:27:58] 2023-02-22 08:27:36,192 | INFO | summary of transferred files:
[2023-02-22 09:27:58] 2023-02-22 08:27:36,192 | INFO | -- lfn=42da0d20-cb21-4c09-9fa0-77a277b5f8b6_84695.1.job.log.tgz, status_code=0, status=transferred
[2023-02-22 09:27:58] 2023-02-22 08:27:36,193 | INFO | stage-out finished correctly
[2023-02-22 09:27:58] 2023-02-22 08:27:37,726 | INFO | finished stage-out (of log) for failed payload
[2023-02-22 09:27:58] 2023-02-22 08:27:39,769 | WARNING | job state is 'failed' - order log transfer and abort job_monitor() (2)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,305 | INFO | job 5761601794 has state=failed
[2023-02-22 09:27:58] 2023-02-22 08:27:40,305 | INFO | preparing for final server update for job 5761601794 in state='failed'
[2023-02-22 09:27:58] 2023-02-22 08:27:40,442 | INFO | will perform stage-out for job id=5761601794
[2023-02-22 09:27:58] 2023-02-22 08:27:40,442 | WARNING | log transfer already attempted
[2023-02-22 09:27:58] 2023-02-22 08:27:40,820 | INFO | stage-out has finished, proceed with final server update
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | INFO | proceeding with final server update
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | INFO | job 5761601794 has failed - writing final server update
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | WARNING | format EVNTtoHITS has no such key: dbData
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | WARNING | format EVNTtoHITS has no such key: dbTime
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | WARNING | wrong length of table data, x=[1677054207.0, 1677054268.0, 1677054329.0, 1677054390.0, 1677054451.0], y=[2204.0, 260214.0, 779787.0, 659082.0, 236243.0] (must be s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | INFO | payload/TRF did not report the number of read events
[2023-02-22 09:27:58] 2023-02-22 08:27:40,823 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-02-22 09:27:58] 2023-02-22 08:27:40,858 | INFO | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-5761601794/memory_monitor_summary.json (trf name=prmon)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,858 | INFO | extracted standard info from prmon json
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | extracted standard memory fields from prmon json
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | ..............................
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . Timing measurements:
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . get job = 0 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . initial setup = 2 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . payload setup = 13 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . stage-in = 0 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . payload execution = 256 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . stage-out = 4 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | ..............................
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-5761601794/pilotlog.txt
[2023-02-22 09:27:58] 2023-02-22 08:27:40,880 | WARNING | detected the following tail of warning/fatal messages in the pilot log:
[2023-02-22 09:27:58] - Log from pilotlog.txt -
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | WARNING | format EVNTtoHITS has no such key: dbData
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | WARNING | format EVNTtoHITS has no such key: dbTime
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | WARNING | wrong length of table data, x=[1677054207.0, 1677054268.0, 1677054329.0, 1677054390.0, 1677054451.0], y=[2204.0, 260214.0, 779787.0, 659082.0, 236243.0] (must be s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | INFO | payload/TRF did not report the number of read events
[2023-02-22 09:27:58] 2023-02-22 08:27:40,823 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-02-22 09:27:58] 2023-02-22 08:27:40,858 | INFO | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-5761601794/memory_monitor_summary.json (trf name=prmon)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,858 | INFO | extracted standard info from prmon json
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | extracted standard memory fields from prmon json
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | ..............................
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . Timing measurements:
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . get job = 0 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . initial setup = 2 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . payload setup = 13 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . stage-in = 0 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . payload execution = 256 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . stage-out = 4 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | ..............................
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-5761601794/pilotlog.txt
[2023-02-22 09:27:58] 2023-02-22 08:27:40,880 | WARNING |
[2023-02-22 09:27:58] [begin log extracts]
[2023-02-22 09:27:58] - Log from pilotlog.txt -
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | WARNING | making sure that job.state is set to failed since a pilot error code is set
[2023-02-22 09:27:58] 2023-02-22 08:27:40,821 | WARNING | format EVNTtoHITS has no such key: dbData
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | WARNING | format EVNTtoHITS has no such key: dbTime
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | WARNING | wrong length of table data, x=[1677054207.0, 1677054268.0, 1677054329.0, 1677054390.0, 1677054451.0], y=[2204.0, 260214.0, 779787.0, 659082.0, 236243.0] (must be s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,822 | INFO | payload/TRF did not report the number of read events
[2023-02-22 09:27:58] 2023-02-22 08:27:40,823 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-02-22 09:27:58] 2023-02-22 08:27:40,858 | INFO | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-5761601794/memory_monitor_summary.json (trf name=prmon)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,858 | INFO | extracted standard info from prmon json
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | extracted standard memory fields from prmon json
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | ..............................
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . Timing measurements:
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . get job = 0 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . initial setup = 2 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . payload setup = 13 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . stage-in = 0 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . payload execution = 256 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | . stage-out = 4 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | ..............................
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | building log extracts (sent to the server as 'pilotLog')
[2023-02-22 09:27:58] 2023-02-22 08:27:40,859 | INFO | executing command: tail -n 20 /var/lib/boinc-client/slots/2/PanDA_Pilot-5761601794/pilotlog.txt
[2023-02-22 09:27:58] [end log extracts]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,880 | WARNING | pilotErrorCodes = [1305, 1328] (will report primary/first error code)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,880 | WARNING | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute 2023-02-22 09:27:27,609 CRITICAL Transform executor raised TransformValidationExcep
[2023-02-22 09:27:58] 2023-02-22 08:27:40,930 | INFO |
[2023-02-22 09:27:58] 2023-02-22 08:27:40,934 | INFO | job summary report
[2023-02-22 09:27:58] 2023-02-22 08:27:40,935 | INFO | --------------------------------------------------
[2023-02-22 09:27:58] 2023-02-22 08:27:40,935 | INFO | PanDA job id: 5761601794
[2023-02-22 09:27:58] 2023-02-22 08:27:40,935 | INFO | task id: NULL
[2023-02-22 09:27:58] 2023-02-22 08:27:40,935 | INFO | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2023-02-22 09:27:27,609 CRITICAL Transform executor raised TransformValidationExceptio
[2023-02-22 09:27:58] 2023-02-22 08:27:40,935 | INFO | error 2/2: 1328: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139) (job report)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | pilot error code: 1328
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | pilot error diag: Invalid memory reference or a segmentation fault in payload: EVNTtoHITS got a SIGSEGV signal (exit code 139) (job report)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | status: LOG_TRANSFER = DONE
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | pilot state: failed
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | transexitcode: 65
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | exeerrorcode: 0
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | exeerrordiag:
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | exitcode: 65
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | exitmsg: EVNTtoHITS got a SIGSEGV signal (exit code 139)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | cpuconsumptiontime: 83 s
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | nevents: 0
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | neventsw: 0
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | pid: 31590
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | pgrp: 31590
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | corecount: 3
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | event service: False
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | sizes: {0: 2533082, 1: 2533316, 11: 2533316, 273: 2554432, 274: 2558703, 276: 2558759, 278: 2558943, 279: 2559849}
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | --------------------------------------------------
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO |
[2023-02-22 09:27:58] 2023-02-22 08:27:40,936 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/2
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue jobs had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue payloads had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue data_in had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue data_out had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,970 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue failed_data_out had 1 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue completed_jobids has 1 job(s)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | queue messages had 0 job(s) [purged]
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | job 5761601794 has completed (purged errors)
[2023-02-22 09:27:58] 2023-02-22 08:27:40,971 | INFO | overall cleanup function is called
[2023-02-22 09:27:58] 2023-02-22 08:27:41,977 | INFO | --- collectZombieJob: --- 10, [31590]
[2023-02-22 09:27:58] 2023-02-22 08:27:41,977 | INFO | zombie collector trying to kill pid 31590
[2023-02-22 09:27:58] 2023-02-22 08:27:41,977 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-02-22 09:27:58] 2023-02-22 08:27:42,979 | INFO | collected zombie processes
[2023-02-22 09:27:58] 2023-02-22 08:27:42,980 | INFO | will now attempt to kill all subprocesses of pid=31590
[2023-02-22 09:27:58] 2023-02-22 08:27:43,033 | INFO | process IDs to be killed: [31590] (in reverse order)
[2023-02-22 09:27:58] 2023-02-22 08:27:43,089 | WARNING | found no corresponding commands to process id(s)
[2023-02-22 09:27:58] 2023-02-22 08:27:43,089 | INFO | Do not look for orphan processes in BOINC jobs
[2023-02-22 09:27:58] 2023-02-22 08:27:43,089 | INFO | ready for new job
[2023-02-22 09:27:58] 2023-02-22 08:27:43,089 | INFO | pilot has finished with previous job - re-establishing logging
[2023-02-22 09:27:58] 2023-02-22 08:27:43,090 | INFO | ***************************************
[2023-02-22 09:27:58] 2023-02-22 08:27:43,090 | INFO | *** PanDA Pilot version 3.4.8 (5) ***
[2023-02-22 09:27:58] 2023-02-22 08:27:43,090 | INFO | ***************************************
[2023-02-22 09:27:58] 2023-02-22 08:27:43,090 | INFO |
[2023-02-22 09:27:58] 2023-02-22 08:27:43,090 | INFO | pilot is running in a VM
[2023-02-22 09:27:58] 2023-02-22 08:27:43,091 | INFO | architecture information:
[2023-02-22 09:27:58] 2023-02-22 08:27:43,209 | INFO |
[2023-02-22 09:27:58] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2023-02-22 09:27:58] Distributor ID: CentOS
[2023-02-22 09:27:58] Description: CentOS Linux release 7.9.2009 (Core)
[2023-02-22 09:27:58] Release: 7.9.2009
[2023-02-22 09:27:58] Codename: Core
[2023-02-22 09:27:58] 2023-02-22 08:27:43,209 | INFO | ***************************************
[2023-02-22 09:27:58] 2023-02-22 08:27:43,722 | INFO | executing command: df -mP /var/lib/boinc-client/slots/2
[2023-02-22 09:27:58] 2023-02-22 08:27:43,746 | INFO | sufficient remaining disk space (38791020544 B)
[2023-02-22 09:27:58] 2023-02-22 08:27:43,746 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-02-22 09:27:58] 2023-02-22 08:27:43,746 | INFO | [job] retrieve thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:43,747 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-02-22 09:27:58] 2023-02-22 08:27:43,747 | WARNING | aborting monitor loop since graceful_stop has been set
[2023-02-22 09:27:58] 2023-02-22 08:27:43,747 | INFO | [monitor] control thread has ended
[2023-02-22 09:27:58] 2023-02-22 08:27:43,748 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2023-02-22 09:27:58] 2023-02-22 08:27:43,885 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-02-22 09:27:58] 2023-02-22 08:27:43,965 | INFO | [job] validate thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:43,966 | INFO | [data] copytool_in thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,206 | INFO | [job] create_data_payload thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,236 | INFO | [job] control thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,239 | INFO | [payload] control thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,499 | INFO | [data] control thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,585 | INFO | [payload] execute_payloads thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,670 | INFO | [payload] validate_pre thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,753 | INFO | [job] job monitor thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,754 | INFO | [data] copytool_out thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:44,901 | INFO | [payload] validate_post thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:45,398 | INFO | [payload] failed_post thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:46,013 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-02-22 09:27:58] 2023-02-22 08:27:46,014 | INFO | [job] queue monitor thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:46,911 | INFO | [data] queue_monitor thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:57,118 | INFO | job.realtimelogging is not enabled
[2023-02-22 09:27:58] 2023-02-22 08:27:57,118 | INFO | [payload] run_realtimelog thread has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:58,006 | INFO | end of generic workflow (traces error code: 0)
[2023-02-22 09:27:58] 2023-02-22 08:27:58,007 | INFO | traces error code: 0
[2023-02-22 09:27:58] 2023-02-22 08:27:58,007 | INFO | pilot has finished
[2023-02-22 09:27:58] 2023-02-22 08:27:58,070 [wrapper] ==== pilot stdout END ====
[2023-02-22 09:27:58] 2023-02-22 08:27:58,075 [wrapper] ==== wrapper stdout RESUME ====
[2023-02-22 09:27:58] 2023-02-22 08:27:58,080 [wrapper] pilotpid: 29071
[2023-02-22 09:27:58] 2023-02-22 08:27:58,085 [wrapper] Pilot exit status: 0
[2023-02-22 09:27:58] 2023-02-22 08:27:58,134 [wrapper] pandaids: 5761601794
[2023-02-22 09:27:58] 2023-02-22 08:27:58,142 [wrapper] apfmon messages muted
[2023-02-22 09:27:58] 2023-02-22 08:27:58,146 [wrapper] Test setup, not cleaning
[2023-02-22 09:27:58] 2023-02-22 08:27:58,151 [wrapper] ==== wrapper stdout END ====
[2023-02-22 09:27:58] 2023-02-22 08:27:58,156 [wrapper] ==== wrapper stderr END ====
[2023-02-22 09:27:58] 2023-02-22 08:27:58,166 [wrapper] wrapperexiting ec=0, duration=349
[2023-02-22 09:27:58] 2023-02-22 08:27:58,170 [wrapper] apfmon messages muted
[2023-02-22 09:27:58] *** Error codes and diagnostics ***
[2023-02-22 09:27:58] "exeErrorCode": 0,
[2023-02-22 09:27:58] "exeErrorDiag": "",
[2023-02-22 09:27:58] "pilotErrorCode": 1305,
[2023-02-22 09:27:58] "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-02-22 09:27:27,609 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
[2023-02-22 09:27:58] *** Listing of results directory ***
[2023-02-22 09:27:58] totale 40860
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 386707 feb 22 08:31 pilot3.tar.gz
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 3906 feb 22 08:55 queuedata.json
[2023-02-22 09:27:58] -rwx------ 1 boinc boinc 26447 feb 22 08:56 runpilot2-wrapper.sh
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 107 feb 22 09:21 wrapper_26015_x86_64-pc-linux-gnu
[2023-02-22 09:27:58] -rwxr-xr-x 1 boinc boinc 8273 feb 22 09:21 run_atlas
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 112 feb 22 09:21 job.xml
[2023-02-22 09:27:58] -rw-r--r-- 2 boinc boinc 17762 feb 22 09:21 start_atlas.sh
[2023-02-22 09:27:58] drwxrwx--x 2 boinc boinc 4096 feb 22 09:21 shared
[2023-02-22 09:27:58] -rw-r--r-- 2 boinc boinc 398382 feb 22 09:21 input.tar.gz
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 6173 feb 22 09:21 init_data.xml
[2023-02-22 09:27:58] -rw-r--r-- 2 boinc boinc 37965264 feb 22 09:21 EVNT.04972714._000027.pool.root.1
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 0 feb 22 09:21 boinc_lockfile
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 2681 feb 22 09:22 pandaJob.out
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 416 feb 22 09:22 setup.sh.local
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 902592 feb 22 09:22 agis_schedconf.cvmfs.json
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 1701555 feb 22 09:22 agis_ddmendpoints.agis.ALL.json
[2023-02-22 09:27:58] drwx------ 4 boinc boinc 4096 feb 22 09:22 pilot3
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 530 feb 22 09:27 boinc_task_state.xml
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 984 feb 22 09:27 memory_monitor_summary.json
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 56688 feb 22 09:27 42da0d20-cb21-4c09-9fa0-77a277b5f8b6_84695.1.job.log.tgz
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 7691 feb 22 09:27 heartbeat.json
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 8192 feb 22 09:27 boinc_mmap_file
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 23 feb 22 09:27 wrapper_checkpoint.txt
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 3041 feb 22 09:27 pilotlog.txt
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 74331 feb 22 09:27 42da0d20-cb21-4c09-9fa0-77a277b5f8b6_84695.1.job.log
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 227 feb 22 09:27 output.list
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 686 feb 22 09:27 runtime_log
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 153600 feb 22 09:27 result.tar.gz
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 619 feb 22 09:27 t07MDmiAzo2n7Olcko1bjSoqABFKDmABFKDmgZyRDmzMOKDmyDAdUo.diag
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 10228 feb 22 09:27 runtime_log.err
[2023-02-22 09:27:58] -rw-r--r-- 1 boinc boinc 23939 feb 22 09:27 stderr.txt
[2023-02-22 09:27:58] No HITS result produced
[2023-02-22 09:27:58] *** Contents of shared directory: ***
[2023-02-22 09:27:58] totale 37640
[2023-02-22 09:27:58] -rw-r--r-- 2 boinc boinc 17762 feb 22 09:21 start_atlas.sh
[2023-02-22 09:27:58] -rw-r--r-- 2 boinc boinc 398382 feb 22 09:21 input.tar.gz
[2023-02-22 09:27:58] -rw-r--r-- 2 boinc boinc 37965264 feb 22 09:21 ATLAS.root_0
[2023-02-22 09:27:58] -rw------- 1 boinc boinc 153600 feb 22 09:27 result.tar.gz
09:28:00 (23462): run_atlas exited; CPU time 32.562988
09:28:00 (23462): called boinc_finish(0)
</stderr_txt>
]]>
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