| Name | BgNKDmIC7p2n7Olcko1bjSoqABFKDmABFKDmgZyRDmsaOKDmAJ3Bpn_1 |
| Workunit | 2282149 |
| Created | 25 Feb 2023, 11:46:18 UTC |
| Sent | 25 Feb 2023, 11:50:42 UTC |
| Report deadline | 4 Mar 2023, 11:50:42 UTC |
| Received | 25 Feb 2023, 12:33:49 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4706 |
| Run time | 22 min 36 sec |
| CPU time | 7 min 7 sec |
| Validate state | Valid |
| Credit | 16.42 |
| Device peak FLOPS | 5.29 GFLOPS |
| Application version | ATLAS Simulation v1.25 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.58 GB |
| Peak swap size | 2.12 GB |
| Peak disk usage | 80.31 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:11:03 (1404406): wrapper (7.7.26015): starting
13:11:03 (1404406): wrapper: running run_atlas (--nthreads 1)
[2023-02-25 13:11:03] Arguments: --nthreads 1
[2023-02-25 13:11:03] Threads: 1
[2023-02-25 13:11:03] Checking for CVMFS
[2023-02-25 13:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2023-02-25 13:12:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-02-25 13:12:29] Running cvmfs_config stat atlas.cern.ch
[2023-02-25 13:12:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-02-25 13:12:29] 2.10.0.0 1295569 160 46732 116098 0 109 3701010 4096001 0 130560 0 414606 99.995 20747 101 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1
[2023-02-25 13:12:29] CVMFS is ok
[2023-02-25 13:12:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-02-25 13:12:29] Checking for apptainer binary...
[2023-02-25 13:12:29] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-02-25 13:12:29] apptainer is not installed, using version from CVMFS
[2023-02-25 13:12:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-02-25 13:12:29] RYZENMPSQ
[2023-02-25 13:12:29] apptainer works
[2023-02-25 13:12:29] Starting ATLAS job with PandaID=5765789554
[2023-02-25 13:12:29] Try creating a directory in /tmp
[2023-02-25 13:12:29] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX
[2023-02-25 13:12:29] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system
[2023-02-25 13:12:29] mktemp /tmp failed
[2023-02-25 13:12:29] Try creating a directory in /var/tmp
[2023-02-25 13:12:29] /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX
[2023-02-25 13:12:29] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system
[2023-02-25 13:12:29] mktemp /var/tmp failed
[2023-02-25 13:12:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-02-25 13:33:35] *** The last 200 lines of the pilot log: ***
[2023-02-25 13:33:35] 2023-02-25 12:33:20,321 | INFO | pilot.util.features | __init__ | collecting machine features
[2023-02-25 13:33:35] 2023-02-25 12:33:20,321 | INFO | pilot.util.features | set | machine features path does not exist (path="")
[2023-02-25 13:33:35] 2023-02-25 12:33:20,321 | INFO | pilot.util.features | __init__ | collecting job features
[2023-02-25 13:33:35] 2023-02-25 12:33:20,321 | INFO | pilot.util.features | set | job features path does not exist (path="")
[2023-02-25 13:33:35] 2023-02-25 12:33:20,321 | DEBUG | pilot.api.analytics | get_fitted_data | removing tails from data to be fitted
[2023-02-25 13:33:35] 2023-02-25 12:33:20,322 | INFO | pilot.api.analytics | get_fitted_data | fitting pss+swap vs Time
[2023-02-25 13:33:35] 2023-02-25 12:33:20,322 | INFO | pilot.api.analytics | get_fitted_data | current memory leak: 1526.40 B/s (using 9 data points, chi2=0.04)
[2023-02-25 13:33:35] 2023-02-25 12:33:20,322 | DEBUG | pilot.user.atlas.jobmetrics | get_job_metrics | job metrics="actualCoreCount=0.40 nEvents=2 dbTime=81.77 dbData=4274626 workDirSize=849608 leak=1526
[2023-02-25 13:33:35] 2023-02-25 12:33:20,322 | INFO | pilot.control.job | get_data_structure | total number of processed events: 2 (read)
[2023-02-25 13:33:35] 2023-02-25 12:33:20,322 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-02-25 13:33:35] 2023-02-25 12:33:20,351 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/2/PanDA_Pilot-5765789554/memory_monitor_summary.json (trf name=prmo
[2023-02-25 13:33:35] 2023-02-25 12:33:20,352 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.937, 'nthreads': 5.812, 'pss': 1279641.0, 'rchar': 61477273.
[2023-02-25 13:33:35] 2023-02-25 12:33:20,352 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | ..............................
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | . Timing measurements:
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | . get job = 0 s
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | . initial setup = 2 s
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | . payload setup = 8 s
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | . stage-in = 5 s
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | . payload execution = 979 s
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | . stage-out = 5 s
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | INFO | pilot.util.timing | timing_report | ..............................
[2023-02-25 13:33:35] 2023-02-25 12:33:20,353 | DEBUG | pilot.control.job | send_state | data={'jobId': '5765789554', 'state': 'finished', 'timestamp': '2023-02-25T13:33:20+01:00', 'siteNam
[2023-02-25 13:33:35] 2023-02-25 12:33:20,356 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5765789554', 'state': 'finished', 'timestamp': '2023-02-25T13:33:20
[2023-02-25 13:33:35] 2023-02-25 12:33:20,356 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/2/heartbeat.json
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report |
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report | job summary report
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report | PanDA job id: 5765789554
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report | task id: NULL
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report | errors: (none)
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2023-02-25 13:33:35] 2023-02-25 12:33:20,442 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2023-02-25 13:33:35] 2023-02-25 12:33:20,443 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2023-02-25 13:33:35] 2023-02-25 12:33:20,443 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2023-02-25 13:33:35] 2023-02-25 12:33:20,443 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2023-02-25 13:33:35] 2023-02-25 12:33:20,443 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 466 s
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | nevents: 2
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | pid: 1412743
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | pgrp: 1412743
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | corecount: 1
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | event service: False
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | sizes: {0: 2532777, 1: 2532976, 6: 2533182, 12: 2533210, 990: 2553333, 997: 2562567, 999: 2562733}
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.control.job | make_job_report |
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/2:
[2023-02-25 13:33:35]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,448 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/2
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | DEBUG | pilot.control.job | has_job_completed | total 43068
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 219051 Feb 25 13:33 7c966c9c-0b2a-4c88-b8b3-cb38897b4bd2_51222.1.job.log
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 161456 Feb 25 13:33 7c966c9c-0b2a-4c88-b8b3-cb38897b4bd2_51222.1.job.log.tgz
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 142 Feb 25 13:12 BgNKDmIC7p2n7Olcko1bjSoqABFKDmABFKDmgZyRDmsaOKDmAJ3Bpn.diag
[2023-02-25 13:33:35] -rw-r--r--. 2 boinc boinc 38019645 Feb 25 13:11 EVNT.04972714._000023.pool.root.1
[2023-02-25 13:33:35] drwxrwx---. 2 boinc boinc 4096 Feb 25 13:33 PanDA_Pilot-5765789554/
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 1701232 Feb 25 13:16 agis_ddmendpoints.agis.ALL.json
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 907677 Feb 25 13:16 agis_schedconf.cvmfs.json
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 0 Feb 25 13:11 boinc_lockfile
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 8192 Feb 25 13:33 boinc_mmap_file
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 533 Feb 25 13:33 boinc_task_state.xml
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 6515 Feb 25 13:33 heartbeat.json
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 6113 Feb 25 13:11 init_data.xml
[2023-02-25 13:33:35] -rw-r--r--. 2 boinc boinc 405227 Feb 25 13:11 input.tar.gz
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 112 Feb 25 13:11 job.xml
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 999 Feb 25 13:33 memory_monitor_summary.json
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 1820270 Feb 25 13:33 output.1.7c966c9c-0b2a-4c88-b8b3-cb38897b4bd2_51222.pool.root
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 464 Feb 25 13:33 output.list
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 2659 Feb 25 13:12 pandaJob.out
[2023-02-25 13:33:35] drwx------. 4 boinc boinc 4096 Feb 25 13:16 pilot3/
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 394908 Feb 25 11:43 pilot3.tar.gz
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 200733 Feb 25 13:33 pilotlog.txt
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 3933 Feb 25 11:43 queuedata.json
[2023-02-25 13:33:35] -rwxr-xr-x. 1 boinc boinc 8273 Feb 25 13:11 run_atlas*
[2023-02-25 13:33:35] -rwx------. 1 boinc boinc 26445 Feb 25 11:43 runpilot2-wrapper.sh*
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 407 Feb 25 13:12 runtime_log
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 6474 Feb 25 13:12 runtime_log.err
[2023-02-25 13:33:35] -rw-------. 1 boinc boinc 416 Feb 25 13:12 setup.sh.local
[2023-02-25 13:33:35] drwxrwx--x. 2 boinc boinc 68 Feb 25 13:11 shared/
[2023-02-25 13:33:35] -rw-r--r--. 2 boinc boinc 17790 Feb 25 13:11 start_atlas.sh
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 2670 Feb 25 13:12 stderr.txt
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 107 Feb 25 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2023-02-25 13:33:35] -rw-r--r--. 1 boinc boinc 25 Feb 25 13:33 wrapper_checkpoint.txt
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,467 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.control.job | has_job_completed | job 5765789554 has completed (purged errors)
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2023-02-25 13:33:35] 2023-02-25 12:33:20,468 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2023-02-25 13:33:35] 2023-02-25 12:33:20,470 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/2/PanDA_Pilot-5765789554
[2023-02-25 13:33:35] 2023-02-25 12:33:21,474 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [1412743]
[2023-02-25 13:33:35] 2023-02-25 12:33:21,474 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 1412743
[2023-02-25 13:33:35] 2023-02-25 12:33:21,475 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-02-25 13:33:35] 2023-02-25 12:33:21,922 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 72 s)
[2023-02-25 13:33:35] 2023-02-25 12:33:22,476 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2023-02-25 13:33:35] 2023-02-25 12:33:22,476 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=1412743
[2023-02-25 13:33:35] 2023-02-25 12:33:22,539 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [1412743] (in reverse order)
[2023-02-25 13:33:35] 2023-02-25 12:33:22,572 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2023-02-25 13:33:35] 2023-02-25 12:33:22,573 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2023-02-25 13:33:35] 2023-02-25 12:33:22,573 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2023-02-25 13:33:35] 2023-02-25 12:33:22,573 | INFO | pilot.control.job | retrieve | ready for new job
[2023-02-25 13:33:35] 2023-02-25 12:33:22,573 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2023-02-25 13:33:35] 2023-02-25 12:33:22,574 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-02-25 13:33:35] 2023-02-25 12:33:22,574 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.5.0 (31) ***
[2023-02-25 13:33:35] 2023-02-25 12:33:22,574 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-02-25 13:33:35] 2023-02-25 12:33:22,574 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2023-02-25 13:33:35] 2023-02-25 12:33:22,574 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2023-02-25 13:33:35] 2023-02-25 12:33:22,576 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2023-02-25 13:33:35] 2023-02-25 12:33:22,644 | INFO | pilot.util.auxiliary | display_architecture_info |
[2023-02-25 13:33:35] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2023-02-25 13:33:35] Distributor ID: CentOS
[2023-02-25 13:33:35] Description: CentOS Linux release 7.9.2009 (Core)
[2023-02-25 13:33:35] Release: 7.9.2009
[2023-02-25 13:33:35] Codename: Core
[2023-02-25 13:33:35] 2023-02-25 12:33:22,644 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-02-25 13:33:35] 2023-02-25 12:33:23,145 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/2
[2023-02-25 13:33:35] 2023-02-25 12:33:23,146 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/2
[2023-02-25 13:33:35] 2023-02-25 12:33:23,160 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2023-02-25 13:33:35] /dev/mapper/cs-root 26608 10357 16251 39% /var/lib/boinc/slots/2
[2023-02-25 13:33:35] 2023-02-25 12:33:23,160 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2023-02-25 13:33:35] 2023-02-25 12:33:23,161 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (17040408576 B)
[2023-02-25 13:33:35] 2023-02-25 12:33:23,161 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2023-02-25 13:33:35] 2023-02-25 12:33:23,161 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:23,161 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:23,161 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration
[2023-02-25 13:33:35] 2023-02-25 12:33:23,275 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:23,275 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:23,351 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2023-02-25 13:33:35] 2023-02-25 12:33:23,352 | DEBUG | pilot.control.data | control | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:23,352 | INFO | pilot.control.data | control | [data] control thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:23,410 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:23,411 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:23,504 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:23,504 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:23,636 | DEBUG | pilot.control.job | validate | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:23,636 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:23,668 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2023-02-25 13:33:35] 2023-02-25 12:33:23,749 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2023-02-25 13:33:35] 2023-02-25 12:33:24,018 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:24,018 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:24,079 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2023-02-25 13:33:35] 2023-02-25 12:33:24,080 | DEBUG | pilot.control.payload | control | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:24,080 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:24,163 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:24,163 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:24,338 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:24,339 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:24,571 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:24,571 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:24,669 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:24,669 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:24,693 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2023-02-25 13:33:35] 2023-02-25 12:33:24,694 | DEBUG | pilot.control.job | control | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:24,694 | INFO | pilot.control.job | control | [job] control thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:24,724 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-02-25 13:33:35] 2023-02-25 12:33:25,453 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2023-02-25 13:33:35] 2023-02-25 12:33:25,454 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:25,454 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:27,727 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:27,728 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:35,581 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2023-02-25 13:33:35] 2023-02-25 12:33:35,582 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2023-02-25 13:33:35] 2023-02-25 12:33:35,582 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2023-02-25 13:33:35] 2023-02-25 12:33:35,582 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet
[2023-02-25 13:33:35] 2023-02-25 12:33:35,582 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:35,804 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa
[2023-02-25 13:33:35] 2023-02-25 12:33:35,804 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2023-02-25 13:33:35] 2023-02-25 12:33:35,804 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2023-02-25 13:33:35] 2023-02-25 12:33:35,804 | INFO | root | wrap_up | traces error code: 0
[2023-02-25 13:33:35] 2023-02-25 12:33:35,804 | INFO | root | wrap_up | pilot has finished
[2023-02-25 13:33:35] 2023-02-25 12:33:35,872 [wrapper] ==== pilot stdout END ====
[2023-02-25 13:33:35] 2023-02-25 12:33:35,874 [wrapper] ==== wrapper stdout RESUME ====
[2023-02-25 13:33:35] 2023-02-25 12:33:35,878 [wrapper] pilotpid: 1409718
[2023-02-25 13:33:35] 2023-02-25 12:33:35,880 [wrapper] Pilot exit status: 0
[2023-02-25 13:33:35] 2023-02-25 12:33:35,895 [wrapper] pandaids: 5765789554
[2023-02-25 13:33:35] 2023-02-25 12:33:35,901 [wrapper] apfmon messages muted
[2023-02-25 13:33:35] 2023-02-25 12:33:35,904 [wrapper] Test setup, not cleaning
[2023-02-25 13:33:35] 2023-02-25 12:33:35,908 [wrapper] ==== wrapper stdout END ====
[2023-02-25 13:33:35] 2023-02-25 12:33:35,910 [wrapper] ==== wrapper stderr END ====
[2023-02-25 13:33:35] 2023-02-25 12:33:35,915 [wrapper] wrapperexiting ec=0, duration=1265
[2023-02-25 13:33:35] 2023-02-25 12:33:35,918 [wrapper] apfmon messages muted
[2023-02-25 13:33:35] *** Error codes and diagnostics ***
[2023-02-25 13:33:35] "exeErrorCode": 0,
[2023-02-25 13:33:35] "exeErrorDiag": "",
[2023-02-25 13:33:35] "pilotErrorCode": 0,
[2023-02-25 13:33:35] "pilotErrorDiag": "",
[2023-02-25 13:33:35] *** Listing of results directory ***
[2023-02-25 13:33:36] insgesamt 45008
[2023-02-25 13:33:36] -rwx------. 1 boinc boinc 26445 25. Feb 11:43 runpilot2-wrapper.sh
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 3933 25. Feb 11:43 queuedata.json
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 394908 25. Feb 11:43 pilot3.tar.gz
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 107 25. Feb 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2023-02-25 13:33:36] -rwxr-xr-x. 1 boinc boinc 8273 25. Feb 13:11 run_atlas
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 112 25. Feb 13:11 job.xml
[2023-02-25 13:33:36] -rw-r--r--. 2 boinc boinc 17790 25. Feb 13:11 start_atlas.sh
[2023-02-25 13:33:36] drwxrwx--x. 2 boinc boinc 68 25. Feb 13:11 shared
[2023-02-25 13:33:36] -rw-r--r--. 2 boinc boinc 405227 25. Feb 13:11 input.tar.gz
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 6113 25. Feb 13:11 init_data.xml
[2023-02-25 13:33:36] -rw-r--r--. 2 boinc boinc 38019645 25. Feb 13:11 EVNT.04972714._000023.pool.root.1
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 0 25. Feb 13:11 boinc_lockfile
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 2659 25. Feb 13:12 pandaJob.out
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 416 25. Feb 13:12 setup.sh.local
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 907677 25. Feb 13:16 agis_schedconf.cvmfs.json
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 1701232 25. Feb 13:16 agis_ddmendpoints.agis.ALL.json
[2023-02-25 13:33:36] drwx------. 4 boinc boinc 4096 25. Feb 13:16 pilot3
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 1820270 25. Feb 13:33 output.1.7c966c9c-0b2a-4c88-b8b3-cb38897b4bd2_51222.pool.root
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 999 25. Feb 13:33 memory_monitor_summary.json
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 161456 25. Feb 13:33 7c966c9c-0b2a-4c88-b8b3-cb38897b4bd2_51222.1.job.log.tgz
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 8192 25. Feb 13:33 boinc_mmap_file
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 25 25. Feb 13:33 wrapper_checkpoint.txt
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 6515 25. Feb 13:33 heartbeat.json
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 533 25. Feb 13:33 boinc_task_state.xml
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 8896 25. Feb 13:33 pilotlog.txt
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 236145 25. Feb 13:33 7c966c9c-0b2a-4c88-b8b3-cb38897b4bd2_51222.1.job.log
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 464 25. Feb 13:33 output.list
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 748 25. Feb 13:33 runtime_log
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 2232320 25. Feb 13:33 result.tar.gz
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 10588 25. Feb 13:33 runtime_log.err
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 625 25. Feb 13:33 BgNKDmIC7p2n7Olcko1bjSoqABFKDmABFKDmgZyRDmsaOKDmAJ3Bpn.diag
[2023-02-25 13:33:36] -rw-r--r--. 1 boinc boinc 31467 25. Feb 13:33 stderr.txt
[2023-02-25 13:33:36] HITS file was successfully produced:
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 1820270 25. Feb 13:33 shared/HITS.pool.root.1
[2023-02-25 13:33:36] *** Contents of shared directory: ***
[2023-02-25 13:33:36] insgesamt 41508
[2023-02-25 13:33:36] -rw-r--r--. 2 boinc boinc 17790 25. Feb 13:11 start_atlas.sh
[2023-02-25 13:33:36] -rw-r--r--. 2 boinc boinc 405227 25. Feb 13:11 input.tar.gz
[2023-02-25 13:33:36] -rw-r--r--. 2 boinc boinc 38019645 25. Feb 13:11 ATLAS.root_0
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 1820270 25. Feb 13:33 HITS.pool.root.1
[2023-02-25 13:33:36] -rw-------. 1 boinc boinc 2232320 25. Feb 13:33 result.tar.gz
13:33:37 (1404406): run_atlas exited; CPU time 322.374003
13:33:37 (1404406): called boinc_finish(0)
</stderr_txt>
]]>
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