Name | e5uMDmKLBu2n7Olcko1bjSoqABFKDmABFKDm7AsVDmjrFKDmlD4XGm_0 |
Workunit | 2285097 |
Created | 8 Mar 2023, 15:57:13 UTC |
Sent | 8 Mar 2023, 16:04:28 UTC |
Report deadline | 15 Mar 2023, 16:04:28 UTC |
Received | 8 Mar 2023, 16:20:16 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4351 |
Run time | 14 min 29 sec |
CPU time | 9 min 8 sec |
Validate state | Valid |
Credit | 5.93 |
Device peak FLOPS | 2.95 GFLOPS |
Application version | ATLAS Simulation v3.00 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.48 GB |
Peak swap size | 2.14 GB |
Peak disk usage | 36.41 MB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 17:04:38 (163788): wrapper (7.7.26015): starting 17:04:38 (163788): wrapper: running run_atlas (--nthreads 1) [2023-03-08 17:04:38] Arguments: --nthreads 1 [2023-03-08 17:04:38] Threads: 1 [2023-03-08 17:04:38] Checking for CVMFS [2023-03-08 17:04:57] Probing /cvmfs/atlas.cern.ch... OK [2023-03-08 17:05:13] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-03-08 17:05:13] Running cvmfs_config stat atlas.cern.ch [2023-03-08 17:05:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-03-08 17:05:14] 2.10.1.0 164021 0 31200 116499 3 1 2356231 4096001 0 130560 0 0 100.000 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1 [2023-03-08 17:05:14] CVMFS is ok [2023-03-08 17:05:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-03-08 17:05:14] Checking for apptainer binary... [2023-03-08 17:05:14] Using apptainer found in PATH at /usr/bin/apptainer [2023-03-08 17:05:14] Running /usr/bin/apptainer --version [2023-03-08 17:05:14] apptainer version 1.1.6-1.el8 [2023-03-08 17:05:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-03-08 17:05:14] fx8s [2023-03-08 17:05:14] apptainer works [2023-03-08 17:06:04] Starting ATLAS job with PandaID=5777374300 [2023-03-08 17:06:04] Try creating a directory in /tmp [2023-03-08 17:06:04] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX [2023-03-08 17:06:04] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system [2023-03-08 17:06:04] mktemp /tmp failed [2023-03-08 17:06:04] Try creating a directory in /var/tmp [2023-03-08 17:06:04] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX [2023-03-08 17:06:04] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system [2023-03-08 17:06:04] mktemp /var/tmp failed [2023-03-08 17:06:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-03-08 17:19:04] *** The last 200 lines of the pilot log: *** [2023-03-08 17:19:04] Virtualization: AMD-V [2023-03-08 17:19:04] Hypervisor vendor: KVM [2023-03-08 17:19:04] Virtualization type: full [2023-03-08 17:19:04] L1d cache: 16K [2023-03-08 17:19:04] L1i cache: 64K [2023-03-08 17:19:04] L2 cache: 2048K [2023-03-08 17:19:04] L3 cache: 8192K [2023-03-08 17:19:04] NUMA node0 CPU(s): 0 [2023-03-08 17:19:04] Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt rdtscp lm constant_tsc rep_good nopl nonstop_tsc [2023-03-08 17:19:04] 2023-03-08 16:18:14,299 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-03-08 17:19:04] 2023-03-08 16:18:14,319 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/0/PanDA_Pilot-5777374300/memory_monitor_summary.json (trf name=prmo [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.636, 'nthreads': 5.454, 'pss': 1273713.0, 'rchar': 94274852. [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | INFO | pilot.util.timing | timing_report | .............................. [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | INFO | pilot.util.timing | timing_report | . initial setup = 2 s [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | INFO | pilot.util.timing | timing_report | . payload setup = 7 s [2023-03-08 17:19:04] 2023-03-08 16:18:14,321 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2023-03-08 17:19:04] 2023-03-08 16:18:14,322 | INFO | pilot.util.timing | timing_report | . payload execution = 639 s [2023-03-08 17:19:04] 2023-03-08 16:18:14,322 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2023-03-08 17:19:04] 2023-03-08 16:18:14,322 | INFO | pilot.util.timing | timing_report | .............................. [2023-03-08 17:19:04] 2023-03-08 16:18:14,322 | DEBUG | pilot.control.job | send_state | data={'jobId': '5777374300', 'state': 'finished', 'timestamp': '2023-03-08T17:18:14+01:00', 'siteNam [2023-03-08 17:19:04] 2023-03-08 16:18:14,323 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5777374300', 'state': 'finished', 'timestamp': '2023-03-08T17:18:14 [2023-03-08 17:19:04] 2023-03-08 16:18:14,323 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/0/heartbeat.json [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | job summary report [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | PanDA job id: 5777374300 [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-03-08 17:19:04] 2023-03-08 16:18:14,421 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 556 s [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | pid: 172511 [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | pgrp: 172511 [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | corecount: 1 [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | event service: False [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | sizes: {0: 2538533, 1: 2538938, 11: 2538938, 650: 2561050, 651: 2570156, 654: 2570322} [2023-03-08 17:19:04] 2023-03-08 16:18:14,422 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-03-08 17:19:04] 2023-03-08 16:18:14,423 | INFO | pilot.control.job | make_job_report | [2023-03-08 17:19:04] 2023-03-08 16:18:14,423 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/0: [2023-03-08 17:19:04] [2023-03-08 17:19:04] 2023-03-08 16:18:14,423 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/0 [2023-03-08 17:19:04] 2023-03-08 16:18:14,437 | DEBUG | pilot.control.job | has_job_completed | total 42540 [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 202850 Mar 8 17:18 1b53af08-c3c6-4305-96c4-080cd7251084_15484.1.job.log [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 162143 Mar 8 17:18 1b53af08-c3c6-4305-96c4-080cd7251084_15484.1.job.log.tgz [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 37727106 Mar 8 17:04 EVNT.04972714._000037.pool.root.1 [2023-03-08 17:19:04] drwxrwx---. 2 boinc boinc 4096 Mar 8 17:18 PanDA_Pilot-5777374300/ [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1705676 Mar 8 17:07 agis_ddmendpoints.agis.ALL.json [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 955971 Mar 8 17:07 agis_schedconf.cvmfs.json [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 0 Mar 8 17:04 boinc_lockfile [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 8192 Mar 8 17:17 boinc_mmap_file [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 532 Mar 8 17:17 boinc_task_state.xml [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 127 Mar 8 17:06 e5uMDmKLBu2n7Olcko1bjSoqABFKDmABFKDm7AsVDmjrFKDmlD4XGm.diag [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 7713 Mar 8 17:18 heartbeat.json [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 6139 Mar 8 17:04 init_data.xml [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 408376 Mar 8 17:04 input.tar.gz [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 112 Mar 8 17:04 job.xml [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1011 Mar 8 17:18 memory_monitor_summary.json [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1376701 Mar 8 17:18 output.1.1b53af08-c3c6-4305-96c4-080cd7251084_15484.pool.root [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 464 Mar 8 17:18 output.list [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 2663 Mar 8 17:06 pandaJob.out [2023-03-08 17:19:04] drwx------. 4 boinc boinc 4096 Mar 8 17:07 pilot3/ [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 397721 Mar 8 16:57 pilot3.tar.gz [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 183105 Mar 8 17:18 pilotlog.txt [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 4239 Mar 8 16:57 queuedata.json [2023-03-08 17:19:04] -rwxr-xr-x. 1 boinc boinc 8343 Mar 8 17:04 run_atlas* [2023-03-08 17:19:04] -rwx------. 1 boinc boinc 26445 Mar 8 16:57 runpilot2-wrapper.sh* [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 407 Mar 8 17:06 runtime_log [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 7026 Mar 8 17:06 runtime_log.err [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 449 Mar 8 17:06 setup.sh.local [2023-03-08 17:19:04] drwxrwx--x. 2 boinc boinc 68 Mar 8 17:04 shared/ [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 17098 Mar 8 17:04 start_atlas.sh [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 2405 Mar 8 17:06 stderr.txt [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 107 Mar 8 17:04 wrapper_26015_x86_64-pc-linux-gnu [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 24 Mar 8 17:17 wrapper_checkpoint.txt [2023-03-08 17:19:04] 2023-03-08 16:18:14,437 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,437 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,438 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.control.job | has_job_completed | job 5777374300 has completed (purged errors) [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-03-08 17:19:04] 2023-03-08 16:18:14,439 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-03-08 17:19:04] 2023-03-08 16:18:14,442 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-5777374300 [2023-03-08 17:19:04] 2023-03-08 16:18:15,446 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [172511] [2023-03-08 17:19:04] 2023-03-08 16:18:15,446 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 172511 [2023-03-08 17:19:04] 2023-03-08 16:18:15,446 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-03-08 17:19:04] 2023-03-08 16:18:16,451 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-03-08 17:19:04] 2023-03-08 16:18:16,452 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=172511 [2023-03-08 17:19:04] 2023-03-08 16:18:16,499 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [172511] (in reverse order) [2023-03-08 17:19:04] 2023-03-08 16:18:16,523 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-03-08 17:19:04] 2023-03-08 16:18:16,523 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-03-08 17:19:04] 2023-03-08 16:18:16,523 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-03-08 17:19:04] 2023-03-08 16:18:16,523 | INFO | pilot.control.job | retrieve | ready for new job [2023-03-08 17:19:04] 2023-03-08 16:18:16,523 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-03-08 17:19:04] 2023-03-08 16:18:16,524 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-08 17:19:04] 2023-03-08 16:18:16,524 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.5.1 (10) *** [2023-03-08 17:19:04] 2023-03-08 16:18:16,524 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-08 17:19:04] 2023-03-08 16:18:16,524 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-03-08 17:19:04] 2023-03-08 16:18:16,524 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM [2023-03-08 17:19:04] 2023-03-08 16:18:16,524 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-03-08 17:19:04] 2023-03-08 16:18:16,581 | INFO | pilot.util.auxiliary | display_architecture_info | [2023-03-08 17:19:04] LSB Version: :core-4.1-amd64:core-4.1-noarch [2023-03-08 17:19:04] Distributor ID: CentOS [2023-03-08 17:19:04] Description: CentOS Linux release 7.9.2009 (Core) [2023-03-08 17:19:04] Release: 7.9.2009 [2023-03-08 17:19:04] Codename: Core [2023-03-08 17:19:04] 2023-03-08 16:18:16,581 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-08 17:19:04] 2023-03-08 16:18:17,084 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0 [2023-03-08 17:19:04] 2023-03-08 16:18:17,084 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/0 [2023-03-08 17:19:04] 2023-03-08 16:18:17,096 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-03-08 17:19:04] /dev/mapper/cl-root 45198 11315 33884 26% /var/lib/boinc/slots/0 [2023-03-08 17:19:04] 2023-03-08 16:18:17,097 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-03-08 17:19:04] 2023-03-08 16:18:17,097 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (35529949184 B) [2023-03-08 17:19:04] 2023-03-08 16:18:17,097 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-03-08 17:19:04] 2023-03-08 16:18:17,097 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:17,098 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:17,098 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set [2023-03-08 17:19:04] 2023-03-08 16:18:17,098 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-03-08 17:19:04] 2023-03-08 16:18:17,098 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-03-08 17:19:04] 2023-03-08 16:18:17,123 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:17,123 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:17,335 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:17,335 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:17,616 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-03-08 17:19:04] 2023-03-08 16:18:17,740 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:17,740 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:17,771 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:17,771 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:17,836 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-03-08 17:19:04] 2023-03-08 16:18:17,836 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:17,836 | INFO | pilot.control.data | control | [data] control thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:18,018 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:18,018 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:18,099 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:18,099 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:18,118 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:18,118 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:18,128 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-03-08 17:19:04] 2023-03-08 16:18:18,128 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:18,128 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:18,336 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-03-08 17:19:04] 2023-03-08 16:18:18,336 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:18,336 | INFO | pilot.control.job | control | [job] control thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:18,400 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:18,400 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:19,428 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-03-08 17:19:04] 2023-03-08 16:18:19,428 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:19,428 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:20,618 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:20,618 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-03-08 17:19:04] 2023-03-08 16:18:27,566 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-03-08 17:19:04] 2023-03-08 16:18:27,566 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-03-08 17:19:04] 2023-03-08 16:18:27,566 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-03-08 17:19:04] 2023-03-08 16:18:27,566 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:18:27,566 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-03-08 17:19:04] 2023-03-08 16:19:04,112 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2023-03-08 17:19:04] 2023-03-08 16:19:04,112 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet [2023-03-08 17:19:04] 2023-03-08 16:19:04,112 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-03-08 17:19:04] 2023-03-08 16:19:04,790 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-03-08 17:19:04] 2023-03-08 16:19:04,790 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-03-08 17:19:04] 2023-03-08 16:19:04,790 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-03-08 17:19:04] 2023-03-08 16:19:04,790 | INFO | root | wrap_up | traces error code: 0 [2023-03-08 17:19:04] 2023-03-08 16:19:04,790 | INFO | root | wrap_up | pilot has finished [2023-03-08 17:19:04] 2023-03-08 16:19:04,846 [wrapper] ==== pilot stdout END ==== [2023-03-08 17:19:04] 2023-03-08 16:19:04,848 [wrapper] ==== wrapper stdout RESUME ==== [2023-03-08 17:19:04] 2023-03-08 16:19:04,851 [wrapper] pilotpid: 169450 [2023-03-08 17:19:04] 2023-03-08 16:19:04,853 [wrapper] Pilot exit status: 0 [2023-03-08 17:19:04] 2023-03-08 16:19:04,865 [wrapper] pandaids: 5777374300 [2023-03-08 17:19:04] 2023-03-08 16:19:04,869 [wrapper] apfmon messages muted [2023-03-08 17:19:04] 2023-03-08 16:19:04,872 [wrapper] Test setup, not cleaning [2023-03-08 17:19:04] 2023-03-08 16:19:04,874 [wrapper] ==== wrapper stdout END ==== [2023-03-08 17:19:04] 2023-03-08 16:19:04,876 [wrapper] ==== wrapper stderr END ==== [2023-03-08 17:19:04] 2023-03-08 16:19:04,880 [wrapper] wrapperexiting ec=0, duration=780 [2023-03-08 17:19:04] 2023-03-08 16:19:04,882 [wrapper] apfmon messages muted [2023-03-08 17:19:04] *** Error codes and diagnostics *** [2023-03-08 17:19:04] "exeErrorCode": 0, [2023-03-08 17:19:04] "exeErrorDiag": "", [2023-03-08 17:19:04] "pilotErrorCode": 0, [2023-03-08 17:19:04] "pilotErrorDiag": "", [2023-03-08 17:19:04] *** Listing of results directory *** [2023-03-08 17:19:04] insgesamt 43896 [2023-03-08 17:19:04] -rwx------. 1 boinc boinc 26445 8. Mär 16:57 runpilot2-wrapper.sh [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 4239 8. Mär 16:57 queuedata.json [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 397721 8. Mär 16:57 pilot3.tar.gz [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 107 8. Mär 17:04 wrapper_26015_x86_64-pc-linux-gnu [2023-03-08 17:19:04] -rwxr-xr-x. 1 boinc boinc 8343 8. Mär 17:04 run_atlas [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 112 8. Mär 17:04 job.xml [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 37727106 8. Mär 17:04 EVNT.04972714._000037.pool.root.1 [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 17098 8. Mär 17:04 start_atlas.sh [2023-03-08 17:19:04] drwxrwx--x. 2 boinc boinc 68 8. Mär 17:04 shared [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 408376 8. Mär 17:04 input.tar.gz [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 6139 8. Mär 17:04 init_data.xml [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 0 8. Mär 17:04 boinc_lockfile [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 2663 8. Mär 17:06 pandaJob.out [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 449 8. Mär 17:06 setup.sh.local [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 955971 8. Mär 17:07 agis_schedconf.cvmfs.json [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1705676 8. Mär 17:07 agis_ddmendpoints.agis.ALL.json [2023-03-08 17:19:04] drwx------. 4 boinc boinc 4096 8. Mär 17:07 pilot3 [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1376701 8. Mär 17:18 output.1.1b53af08-c3c6-4305-96c4-080cd7251084_15484.pool.root [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1011 8. Mär 17:18 memory_monitor_summary.json [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 162143 8. Mär 17:18 1b53af08-c3c6-4305-96c4-080cd7251084_15484.1.job.log.tgz [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 7713 8. Mär 17:18 heartbeat.json [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 532 8. Mär 17:18 boinc_task_state.xml [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 8192 8. Mär 17:18 boinc_mmap_file [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 24 8. Mär 17:18 wrapper_checkpoint.txt [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 9042 8. Mär 17:19 pilotlog.txt [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 219925 8. Mär 17:19 1b53af08-c3c6-4305-96c4-080cd7251084_15484.1.job.log [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 464 8. Mär 17:19 output.list [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 748 8. Mär 17:19 runtime_log [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1781760 8. Mär 17:19 result.tar.gz [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 11124 8. Mär 17:19 runtime_log.err [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 623 8. Mär 17:19 e5uMDmKLBu2n7Olcko1bjSoqABFKDmABFKDm7AsVDmjrFKDmlD4XGm.diag [2023-03-08 17:19:04] -rw-r--r--. 1 boinc boinc 30276 8. Mär 17:19 stderr.txt [2023-03-08 17:19:04] HITS file was successfully produced: [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1376701 8. Mär 17:18 shared/HITS.pool.root.1 [2023-03-08 17:19:04] *** Contents of shared directory: *** [2023-03-08 17:19:04] insgesamt 40352 [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 37727106 8. Mär 17:04 ATLAS.root_0 [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 17098 8. Mär 17:04 start_atlas.sh [2023-03-08 17:19:04] -rw-r--r--. 2 boinc boinc 408376 8. Mär 17:04 input.tar.gz [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1376701 8. Mär 17:18 HITS.pool.root.1 [2023-03-08 17:19:04] -rw-------. 1 boinc boinc 1781760 8. Mär 17:19 result.tar.gz 17:19:05 (163788): run_atlas exited; CPU time 548.102899 17:19:05 (163788): called boinc_finish(0) </stderr_txt> ]]>
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