| Name | FuKODmZsMv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmvAGKDmmgUcom_0 |
| Workunit | 2286153 |
| Created | 11 Mar 2023, 22:28:28 UTC |
| Sent | 11 Mar 2023, 22:28:49 UTC |
| Report deadline | 18 Mar 2023, 22:28:49 UTC |
| Received | 12 Mar 2023, 0:01:34 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4351 |
| Run time | 50 min 1 sec |
| CPU time | 24 min 1 sec |
| Validate state | Valid |
| Credit | 34.58 |
| Device peak FLOPS | 2.95 GFLOPS |
| Application version | ATLAS Simulation v3.00 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.58 GB |
| Peak swap size | 6.61 GB |
| Peak disk usage | 116.97 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:48:48 (785990): wrapper (7.7.26015): starting
23:48:48 (785990): wrapper: running run_atlas (--nthreads 1)
[2023-03-11 23:48:48] Arguments: --nthreads 1
[2023-03-11 23:48:48] Threads: 1
[2023-03-11 23:48:48] Checking for CVMFS
[2023-03-11 23:48:48] Probing /cvmfs/atlas.cern.ch... OK
[2023-03-11 23:49:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-03-11 23:49:09] Running cvmfs_config stat atlas.cern.ch
[2023-03-11 23:49:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-03-11 23:49:09] 2.10.1.0 771484 20 39988 116630 3 80 2657813 4096001 0 130560 0 54227 99.969 18128 462 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1
[2023-03-11 23:49:09] CVMFS is ok
[2023-03-11 23:49:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-03-11 23:49:09] Checking for apptainer binary...
[2023-03-11 23:49:09] Using apptainer found in PATH at /usr/bin/apptainer
[2023-03-11 23:49:09] Running /usr/bin/apptainer --version
[2023-03-11 23:49:09] apptainer version 1.1.6-1.el8
[2023-03-11 23:49:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-03-11 23:49:09] fx8s
[2023-03-11 23:49:09] apptainer works
[2023-03-11 23:49:59] Starting ATLAS job with PandaID=5780668298
[2023-03-11 23:49:59] Try creating a directory in /tmp
[2023-03-11 23:49:59] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX
[2023-03-11 23:49:59] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system
[2023-03-11 23:49:59] mktemp /tmp failed
[2023-03-11 23:49:59] Try creating a directory in /var/tmp
[2023-03-11 23:49:59] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX
[2023-03-11 23:50:00] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system
[2023-03-11 23:50:00] mktemp /var/tmp failed
[2023-03-11 23:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:39:50 (3153): wrapper (7.7.26015): starting
00:39:50 (3153): wrapper: running run_atlas (--nthreads 1)
[2023-03-12 00:39:50] Arguments: --nthreads 1
[2023-03-12 00:39:50] Threads: 1
[2023-03-12 00:39:50] This job has been restarted, cleaning up previous attempt
[2023-03-12 00:39:50] Checking for CVMFS
[2023-03-12 00:40:52] Probing /cvmfs/atlas.cern.ch... OK
[2023-03-12 00:41:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-03-12 00:41:09] Running cvmfs_config stat atlas.cern.ch
[2023-03-12 00:41:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-03-12 00:41:09] 2.10.1.0 3421 0 29604 116632 3 1 2660204 4096001 0 130560 0 0 0.000 851 195 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1
[2023-03-12 00:41:09] CVMFS is ok
[2023-03-12 00:41:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-03-12 00:41:09] Checking for apptainer binary...
[2023-03-12 00:41:09] Using apptainer found in PATH at /usr/bin/apptainer
[2023-03-12 00:41:09] Running /usr/bin/apptainer --version
[2023-03-12 00:41:09] apptainer version 1.1.6-1.el8
[2023-03-12 00:41:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-03-12 00:41:10] fx8s
[2023-03-12 00:41:10] apptainer works
[2023-03-12 00:42:00] Starting ATLAS job with PandaID=5780668298
[2023-03-12 00:42:00] Try creating a directory in /tmp
[2023-03-12 00:42:00] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX
[2023-03-12 00:42:01] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system
[2023-03-12 00:42:01] mktemp /tmp failed
[2023-03-12 00:42:01] Try creating a directory in /var/tmp
[2023-03-12 00:42:01] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX
[2023-03-12 00:42:01] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system
[2023-03-12 00:42:01] mktemp /var/tmp failed
[2023-03-12 00:42:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-03-12 01:01:20] *** The last 200 lines of the pilot log: ***
[2023-03-12 01:01:20] Virtualization type: full
[2023-03-12 01:01:20] L1d cache: 16K
[2023-03-12 01:01:20] L1i cache: 64K
[2023-03-12 01:01:20] L2 cache: 2048K
[2023-03-12 01:01:20] L3 cache: 8192K
[2023-03-12 01:01:20] NUMA node0 CPU(s): 0
[2023-03-12 01:01:20] Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt rdtscp lm constant_tsc rep_good nopl nonstop_tsc
[2023-03-12 01:01:20] 2023-03-12 00:00:54,076 | INFO | pilot.util.workernode | get_cpu_cores | found 1 cores (1 cores per socket, 1 sockets)
[2023-03-12 01:01:20] 2023-03-12 00:00:54,077 | DEBUG | pilot.util.workernode | get_cpu_cores | current model string: AMD FX-8370E Eight-Core Processor 2048 KB
[2023-03-12 01:01:20] 2023-03-12 00:00:54,077 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-03-12 01:01:20] 2023-03-12 00:00:54,095 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/0/PanDA_Pilot-5780668298/memory_monitor_summary.json (trf name=prmo
[2023-03-12 01:01:20] 2023-03-12 00:00:54,096 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.0, 'nthreads': 5.941, 'pss': 1485811.0, 'rchar': 60758517.0,
[2023-03-12 01:01:20] 2023-03-12 00:00:54,096 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json
[2023-03-12 01:01:20] 2023-03-12 00:00:54,096 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | ..............................
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | . Timing measurements:
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | . get job = 0 s
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | . initial setup = 2 s
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | . payload setup = 15 s
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | . payload execution = 1018 s
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | INFO | pilot.util.timing | timing_report | ..............................
[2023-03-12 01:01:20] 2023-03-12 00:00:54,097 | DEBUG | pilot.control.job | send_state | data={'jobId': '5780668298', 'state': 'finished', 'timestamp': '2023-03-12T01:00:54+01:00', 'siteNam
[2023-03-12 01:01:20] 2023-03-12 00:00:54,098 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5780668298', 'state': 'finished', 'timestamp': '2023-03-12T01:00:54
[2023-03-12 01:01:20] 2023-03-12 00:00:54,098 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/0/heartbeat.json
[2023-03-12 01:01:20] 2023-03-12 00:00:54,190 | INFO | pilot.control.job | make_job_report |
[2023-03-12 01:01:20] 2023-03-12 00:00:54,190 | INFO | pilot.control.job | make_job_report | job summary report
[2023-03-12 01:01:20] 2023-03-12 00:00:54,190 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-03-12 01:01:20] 2023-03-12 00:00:54,190 | INFO | pilot.control.job | make_job_report | PanDA job id: 5780668298
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | task id: NULL
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | errors: (none)
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 881 s
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | nevents: 2
[2023-03-12 01:01:20] 2023-03-12 00:00:54,191 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | INFO | pilot.control.job | make_job_report | pid: 11905
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | INFO | pilot.control.job | make_job_report | pgrp: 11905
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | INFO | pilot.control.job | make_job_report | corecount: 1
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | INFO | pilot.control.job | make_job_report | event service: False
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | INFO | pilot.control.job | make_job_report | sizes: {0: 2536266, 1: 2537122, 2: 2537328, 12: 2537356, 1036: 2559011, 1037: 2559010, 1038: 2568244
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | INFO | pilot.control.job | make_job_report |
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/0:
[2023-03-12 01:01:20]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,192 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/0
[2023-03-12 01:01:20] 2023-03-12 00:00:54,205 | DEBUG | pilot.control.job | has_job_completed | total 80276
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 243849 Mar 12 01:00 6eee094d-3c1f-48ae-8db3-6f6f4ce72202_93959.1.job.log
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 164447 Mar 12 01:00 6eee094d-3c1f-48ae-8db3-6f6f4ce72202_93959.1.job.log.tgz
[2023-03-12 01:01:20] -rw-r--r--. 3 boinc boinc 38184411 Mar 11 23:48 ATLAS.root_0
[2023-03-12 01:01:20] -rw-r--r--. 3 boinc boinc 38184411 Mar 11 23:48 EVNT.04972714._000028.pool.root.1
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 254 Mar 12 00:42 FuKODmZsMv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmvAGKDmmgUcom.diag
[2023-03-12 01:01:20] drwxrwx---. 2 boinc boinc 4096 Mar 12 01:00 PanDA_Pilot-5780668298/
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1704527 Mar 11 23:50 agis_ddmendpoints.agis.ALL.json
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 969579 Mar 12 00:43 agis_schedconf.cvmfs.json
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 0 Mar 11 23:48 boinc_lockfile
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 8192 Mar 12 01:00 boinc_mmap_file
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 535 Mar 12 01:00 boinc_task_state.xml
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 7303 Mar 12 01:00 heartbeat.json
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 6145 Mar 12 00:43 init_data.xml
[2023-03-12 01:01:20] -rw-r--r--. 2 boinc boinc 406251 Mar 11 23:48 input.tar.gz
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 112 Mar 11 23:48 job.xml
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1008 Mar 12 01:00 memory_monitor_summary.json
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1490899 Mar 12 01:00 output.1.6eee094d-3c1f-48ae-8db3-6f6f4ce72202_93959.pool.root
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 464 Mar 12 01:00 output.list
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 2664 Mar 12 00:42 pandaJob.out
[2023-03-12 01:01:20] drwx------. 4 boinc boinc 4096 Mar 10 17:52 pilot3/
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 395887 Mar 11 23:28 pilot3.tar.gz
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 224104 Mar 12 01:00 pilotlog.txt
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 4239 Mar 11 23:26 queuedata.json
[2023-03-12 01:01:20] -rwxr-xr-x. 1 boinc boinc 8343 Mar 11 23:48 run_atlas*
[2023-03-12 01:01:20] -rwx------. 1 boinc boinc 26445 Mar 11 23:28 runpilot2-wrapper.sh*
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 407 Mar 12 00:42 runtime_log
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 7103 Mar 12 00:42 runtime_log.err
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 449 Mar 12 00:42 setup.sh.local
[2023-03-12 01:01:20] drwxrwx--x. 2 boinc boinc 68 Mar 11 23:48 shared/
[2023-03-12 01:01:20] -rw-r--r--. 2 boinc boinc 17098 Mar 11 23:48 start_atlas.sh
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 4897 Mar 12 00:42 stderr.txt
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 107 Mar 11 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 26 Mar 12 01:00 wrapper_checkpoint.txt
[2023-03-12 01:01:20] 2023-03-12 00:00:54,205 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,205 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,205 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,205 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,205 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,205 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2023-03-12 01:01:20] 2023-03-12 00:00:54,206 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,207 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2023-03-12 01:01:20] 2023-03-12 00:00:54,207 | INFO | pilot.control.job | has_job_completed | job 5780668298 has completed (purged errors)
[2023-03-12 01:01:20] 2023-03-12 00:00:54,207 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2023-03-12 01:01:20] 2023-03-12 00:00:54,207 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2023-03-12 01:01:20] 2023-03-12 00:00:54,209 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-5780668298
[2023-03-12 01:01:20] 2023-03-12 00:00:55,215 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [11905]
[2023-03-12 01:01:20] 2023-03-12 00:00:55,215 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 11905
[2023-03-12 01:01:20] 2023-03-12 00:00:55,216 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-03-12 01:01:20] 2023-03-12 00:00:56,222 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2023-03-12 01:01:20] 2023-03-12 00:00:56,222 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=11905
[2023-03-12 01:01:20] 2023-03-12 00:00:56,269 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [11905] (in reverse order)
[2023-03-12 01:01:20] 2023-03-12 00:00:56,294 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2023-03-12 01:01:20] 2023-03-12 00:00:56,294 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2023-03-12 01:01:20] 2023-03-12 00:00:56,294 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2023-03-12 01:01:20] 2023-03-12 00:00:56,294 | INFO | pilot.control.job | retrieve | ready for new job
[2023-03-12 01:01:20] 2023-03-12 00:00:56,294 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2023-03-12 01:01:20] 2023-03-12 00:00:56,295 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-03-12 01:01:20] 2023-03-12 00:00:56,295 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.5.1 (14) ***
[2023-03-12 01:01:20] 2023-03-12 00:00:56,295 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-03-12 01:01:20] 2023-03-12 00:00:56,295 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2023-03-12 01:01:20] 2023-03-12 00:00:56,295 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2023-03-12 01:01:20] 2023-03-12 00:00:56,296 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2023-03-12 01:01:20] 2023-03-12 00:00:56,347 | INFO | pilot.util.auxiliary | display_architecture_info |
[2023-03-12 01:01:20] LSB Version: :core-4.1-amd64:core-4.1-noarch
[2023-03-12 01:01:20] Distributor ID: CentOS
[2023-03-12 01:01:20] Description: CentOS Linux release 7.9.2009 (Core)
[2023-03-12 01:01:20] Release: 7.9.2009
[2023-03-12 01:01:20] Codename: Core
[2023-03-12 01:01:20] 2023-03-12 00:00:56,347 | INFO | pilot.util.auxiliary | pilot_version_banner | ****************************************
[2023-03-12 01:01:20] 2023-03-12 00:00:56,851 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0
[2023-03-12 01:01:20] 2023-03-12 00:00:56,851 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/0
[2023-03-12 01:01:20] 2023-03-12 00:00:56,863 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2023-03-12 01:01:20] /dev/mapper/cl-root 45198 11553 33646 26% /var/lib/boinc/slots/0
[2023-03-12 01:01:20] 2023-03-12 00:00:56,863 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2023-03-12 01:01:20] 2023-03-12 00:00:56,863 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (35280388096 B)
[2023-03-12 01:01:20] 2023-03-12 00:00:56,864 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2023-03-12 01:01:20] 2023-03-12 00:00:56,864 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:56,864 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:56,864 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2023-03-12 01:01:20] 2023-03-12 00:00:57,027 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,028 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:57,295 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2023-03-12 01:01:20] 2023-03-12 00:00:57,295 | DEBUG | pilot.control.job | control | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,295 | INFO | pilot.control.job | control | [job] control thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:57,375 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2023-03-12 01:01:20] 2023-03-12 00:00:57,376 | DEBUG | pilot.control.data | control | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,376 | INFO | pilot.control.data | control | [data] control thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:57,376 | DEBUG | pilot.control.job | validate | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,376 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:57,377 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,377 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:57,560 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,560 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:57,714 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2023-03-12 01:01:20] 2023-03-12 00:00:57,748 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,749 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:57,838 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2023-03-12 01:01:20] 2023-03-12 00:00:57,838 | DEBUG | pilot.control.payload | control | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,839 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:57,865 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:57,865 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:58,028 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:58,028 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:58,202 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:58,202 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:00:59,203 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2023-03-12 01:01:20] 2023-03-12 00:00:59,204 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:00:59,204 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:01:00,022 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-03-12 01:01:20] 2023-03-12 00:01:03,023 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:01:03,023 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:01:07,153 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2023-03-12 01:01:20] 2023-03-12 00:01:07,153 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2023-03-12 01:01:20] 2023-03-12 00:01:07,154 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2023-03-12 01:01:20] 2023-03-12 00:01:07,154 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:01:07,154 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:01:20,111 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s)
[2023-03-12 01:01:20] 2023-03-12 00:01:20,111 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet
[2023-03-12 01:01:20] 2023-03-12 00:01:20,111 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2023-03-12 01:01:20] 2023-03-12 00:01:20,289 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa
[2023-03-12 01:01:20] 2023-03-12 00:01:20,289 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2023-03-12 01:01:20] 2023-03-12 00:01:20,289 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2023-03-12 01:01:20] 2023-03-12 00:01:20,289 | INFO | root | wrap_up | traces error code: 0
[2023-03-12 01:01:20] 2023-03-12 00:01:20,290 | INFO | root | wrap_up | pilot has finished
[2023-03-12 01:01:20] 2023-03-12 00:01:20,348 [wrapper] ==== pilot stdout END ====
[2023-03-12 01:01:20] 2023-03-12 00:01:20,350 [wrapper] ==== wrapper stdout RESUME ====
[2023-03-12 01:01:20] 2023-03-12 00:01:20,352 [wrapper] pilotpid: 8845
[2023-03-12 01:01:20] 2023-03-12 00:01:20,354 [wrapper] Pilot exit status: 0
[2023-03-12 01:01:20] 2023-03-12 00:01:20,366 [wrapper] pandaids: 5780668298 5780668298
[2023-03-12 01:01:20] 2023-03-12 00:01:20,370 [wrapper] apfmon messages muted
[2023-03-12 01:01:20] 2023-03-12 00:01:20,372 [wrapper] Test setup, not cleaning
[2023-03-12 01:01:20] 2023-03-12 00:01:20,374 [wrapper] ==== wrapper stdout END ====
[2023-03-12 01:01:20] 2023-03-12 00:01:20,377 [wrapper] ==== wrapper stderr END ====
[2023-03-12 01:01:20] 2023-03-12 00:01:20,381 [wrapper] wrapperexiting ec=0, duration=1159
[2023-03-12 01:01:20] 2023-03-12 00:01:20,383 [wrapper] apfmon messages muted
[2023-03-12 01:01:20] *** Error codes and diagnostics ***
[2023-03-12 01:01:20] "exeErrorCode": 0,
[2023-03-12 01:01:20] "exeErrorDiag": "",
[2023-03-12 01:01:20] "pilotErrorCode": 0,
[2023-03-12 01:01:20] "pilotErrorDiag": "",
[2023-03-12 01:01:20] *** Listing of results directory ***
[2023-03-12 01:01:20] insgesamt 81952
[2023-03-12 01:01:20] drwx------. 4 boinc boinc 4096 10. Mär 17:52 pilot3
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 4239 11. Mär 23:26 queuedata.json
[2023-03-12 01:01:20] -rwx------. 1 boinc boinc 26445 11. Mär 23:28 runpilot2-wrapper.sh
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 395887 11. Mär 23:28 pilot3.tar.gz
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 107 11. Mär 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2023-03-12 01:01:20] -rwxr-xr-x. 1 boinc boinc 8343 11. Mär 23:48 run_atlas
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 112 11. Mär 23:48 job.xml
[2023-03-12 01:01:20] -rw-r--r--. 3 boinc boinc 38184411 11. Mär 23:48 EVNT.04972714._000028.pool.root.1
[2023-03-12 01:01:20] -rw-r--r--. 3 boinc boinc 38184411 11. Mär 23:48 ATLAS.root_0
[2023-03-12 01:01:20] -rw-r--r--. 2 boinc boinc 17098 11. Mär 23:48 start_atlas.sh
[2023-03-12 01:01:20] drwxrwx--x. 2 boinc boinc 68 11. Mär 23:48 shared
[2023-03-12 01:01:20] -rw-r--r--. 2 boinc boinc 406251 11. Mär 23:48 input.tar.gz
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 0 11. Mär 23:48 boinc_lockfile
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1704527 11. Mär 23:50 agis_ddmendpoints.agis.ALL.json
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 2664 12. Mär 00:42 pandaJob.out
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 449 12. Mär 00:42 setup.sh.local
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 6145 12. Mär 00:43 init_data.xml
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 969579 12. Mär 00:43 agis_schedconf.cvmfs.json
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1490899 12. Mär 01:00 output.1.6eee094d-3c1f-48ae-8db3-6f6f4ce72202_93959.pool.root
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1008 12. Mär 01:00 memory_monitor_summary.json
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 164447 12. Mär 01:00 6eee094d-3c1f-48ae-8db3-6f6f4ce72202_93959.1.job.log.tgz
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 7303 12. Mär 01:00 heartbeat.json
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 8192 12. Mär 01:01 boinc_mmap_file
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 26 12. Mär 01:01 wrapper_checkpoint.txt
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 535 12. Mär 01:01 boinc_task_state.xml
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 8887 12. Mär 01:01 pilotlog.txt
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 260836 12. Mär 01:01 6eee094d-3c1f-48ae-8db3-6f6f4ce72202_93959.1.job.log
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 464 12. Mär 01:01 output.list
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 748 12. Mär 01:01 runtime_log
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1935360 12. Mär 01:01 result.tar.gz
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 11202 12. Mär 01:01 runtime_log.err
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 738 12. Mär 01:01 FuKODmZsMv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmvAGKDmmgUcom.diag
[2023-03-12 01:01:20] -rw-r--r--. 1 boinc boinc 32948 12. Mär 01:01 stderr.txt
[2023-03-12 01:01:20] HITS file was successfully produced:
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1490899 12. Mär 01:00 shared/HITS.pool.root.1
[2023-03-12 01:01:20] *** Contents of shared directory: ***
[2023-03-12 01:01:20] insgesamt 41060
[2023-03-12 01:01:20] -rw-r--r--. 3 boinc boinc 38184411 11. Mär 23:48 ATLAS.root_0
[2023-03-12 01:01:20] -rw-r--r--. 2 boinc boinc 17098 11. Mär 23:48 start_atlas.sh
[2023-03-12 01:01:20] -rw-r--r--. 2 boinc boinc 406251 11. Mär 23:48 input.tar.gz
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1490899 12. Mär 01:00 HITS.pool.root.1
[2023-03-12 01:01:20] -rw-------. 1 boinc boinc 1935360 12. Mär 01:01 result.tar.gz
01:01:22 (3153): run_atlas exited; CPU time 872.296511
01:01:22 (3153): called boinc_finish(0)
</stderr_txt>
]]>
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