Name | zesLDmQKUv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmsCGKDm9rphpm_0 |
Workunit | 2286265 |
Created | 12 Mar 2023, 6:25:44 UTC |
Sent | 12 Mar 2023, 6:28:39 UTC |
Report deadline | 19 Mar 2023, 6:28:39 UTC |
Received | 12 Mar 2023, 7:08:14 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4351 |
Run time | 22 min 14 sec |
CPU time | 17 min 16 sec |
Validate state | Valid |
Credit | 15.24 |
Device peak FLOPS | 2.95 GFLOPS |
Application version | ATLAS Simulation v3.00 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.58 GB |
Peak swap size | 2.14 GB |
Peak disk usage | 80.45 MB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 07:45:46 (91816): wrapper (7.7.26015): starting 07:45:46 (91816): wrapper: running run_atlas (--nthreads 1) [2023-03-12 07:45:46] Arguments: --nthreads 1 [2023-03-12 07:45:46] Threads: 1 [2023-03-12 07:45:46] Checking for CVMFS [2023-03-12 07:45:46] Probing /cvmfs/atlas.cern.ch... OK [2023-03-12 07:46:05] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-03-12 07:46:05] Running cvmfs_config stat atlas.cern.ch [2023-03-12 07:46:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-03-12 07:46:05] 2.10.1.0 77593 15 42140 116641 0 80 2722764 4096000 0 130560 0 50760 99.996 920 61 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1 [2023-03-12 07:46:05] CVMFS is ok [2023-03-12 07:46:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-03-12 07:46:05] Checking for apptainer binary... [2023-03-12 07:46:05] Using apptainer found in PATH at /usr/bin/apptainer [2023-03-12 07:46:05] Running /usr/bin/apptainer --version [2023-03-12 07:46:05] apptainer version 1.1.6-1.el8 [2023-03-12 07:46:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-03-12 07:46:05] fx8s [2023-03-12 07:46:05] apptainer works [2023-03-12 07:46:56] Starting ATLAS job with PandaID=5780946575 [2023-03-12 07:46:56] Try creating a directory in /tmp [2023-03-12 07:46:56] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX [2023-03-12 07:46:56] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system [2023-03-12 07:46:56] mktemp /tmp failed [2023-03-12 07:46:56] Try creating a directory in /var/tmp [2023-03-12 07:46:56] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX [2023-03-12 07:46:56] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system [2023-03-12 07:46:56] mktemp /var/tmp failed [2023-03-12 07:46:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-03-12 08:07:57] *** The last 200 lines of the pilot log: *** [2023-03-12 08:07:57] Hypervisor vendor: KVM [2023-03-12 08:07:57] Virtualization type: full [2023-03-12 08:07:57] L1d cache: 16K [2023-03-12 08:07:57] L1i cache: 64K [2023-03-12 08:07:57] L2 cache: 2048K [2023-03-12 08:07:57] L3 cache: 8192K [2023-03-12 08:07:57] NUMA node0 CPU(s): 0 [2023-03-12 08:07:57] Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt rdtscp lm constant_tsc rep_good nopl nonstop_tsc [2023-03-12 08:07:57] 2023-03-12 07:07:08,772 | INFO | pilot.util.workernode | get_cpu_cores | found 1 cores (1 cores per socket, 1 sockets) [2023-03-12 08:07:57] 2023-03-12 07:07:08,772 | DEBUG | pilot.util.workernode | get_cpu_cores | current model string: AMD FX-8370E Eight-Core Processor 2048 KB [2023-03-12 08:07:57] 2023-03-12 07:07:08,772 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-03-12 08:07:57] 2023-03-12 07:07:08,796 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/0/PanDA_Pilot-5780946575/memory_monitor_summary.json (trf name=prmo [2023-03-12 08:07:57] 2023-03-12 07:07:08,797 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.894, 'nthreads': 5.789, 'pss': 1531691.0, 'rchar': 54502863. [2023-03-12 08:07:57] 2023-03-12 07:07:08,797 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-03-12 08:07:57] 2023-03-12 07:07:08,797 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-03-12 08:07:57] 2023-03-12 07:07:08,797 | INFO | pilot.util.timing | timing_report | .............................. [2023-03-12 08:07:57] 2023-03-12 07:07:08,797 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-03-12 08:07:57] 2023-03-12 07:07:08,797 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2023-03-12 08:07:57] 2023-03-12 07:07:08,798 | INFO | pilot.util.timing | timing_report | . initial setup = 2 s [2023-03-12 08:07:57] 2023-03-12 07:07:08,798 | INFO | pilot.util.timing | timing_report | . payload setup = 7 s [2023-03-12 08:07:57] 2023-03-12 07:07:08,798 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2023-03-12 08:07:57] 2023-03-12 07:07:08,798 | INFO | pilot.util.timing | timing_report | . payload execution = 1150 s [2023-03-12 08:07:57] 2023-03-12 07:07:08,798 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2023-03-12 08:07:57] 2023-03-12 07:07:08,798 | INFO | pilot.util.timing | timing_report | .............................. [2023-03-12 08:07:57] 2023-03-12 07:07:08,798 | DEBUG | pilot.control.job | send_state | data={'jobId': '5780946575', 'state': 'finished', 'timestamp': '2023-03-12T08:07:08+01:00', 'siteNam [2023-03-12 08:07:57] 2023-03-12 07:07:08,799 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5780946575', 'state': 'finished', 'timestamp': '2023-03-12T08:07:08 [2023-03-12 08:07:57] 2023-03-12 07:07:08,799 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/0/heartbeat.json [2023-03-12 08:07:57] 2023-03-12 07:07:09,013 | INFO | pilot.control.job | make_job_report | [2023-03-12 08:07:57] 2023-03-12 07:07:09,013 | INFO | pilot.control.job | make_job_report | job summary report [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | PanDA job id: 5780946575 [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-03-12 08:07:57] 2023-03-12 07:07:09,014 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1046 s [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | pid: 100267 [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | pgrp: 100267 [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | corecount: 1 [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | event service: False [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | sizes: {0: 2537240, 1: 2537300, 11: 2537328, 1161: 2559067, 1163: 2568173, 1166: 2568339} [2023-03-12 08:07:57] 2023-03-12 07:07:09,015 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-03-12 08:07:57] 2023-03-12 07:07:09,016 | INFO | pilot.control.job | make_job_report | [2023-03-12 08:07:57] 2023-03-12 07:07:09,016 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/0: [2023-03-12 08:07:57] [2023-03-12 08:07:57] 2023-03-12 07:07:09,016 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/0 [2023-03-12 08:07:57] 2023-03-12 07:07:09,032 | DEBUG | pilot.control.job | has_job_completed | total 43108 [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 259425 Mar 12 08:07 5331ef2f-7f4f-415d-b7f7-1d1e0e3add97_56288.1.job.log [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 165801 Mar 12 08:07 5331ef2f-7f4f-415d-b7f7-1d1e0e3add97_56288.1.job.log.tgz [2023-03-12 08:07:57] -rw-r--r--. 2 boinc boinc 38184411 Mar 12 07:45 EVNT.04972714._000028.pool.root.1 [2023-03-12 08:07:57] drwxrwx---. 2 boinc boinc 4096 Mar 12 08:07 PanDA_Pilot-5780946575/ [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 1704527 Mar 12 07:47 agis_ddmendpoints.agis.ALL.json [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 969587 Mar 12 07:47 agis_schedconf.cvmfs.json [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 0 Mar 12 07:45 boinc_lockfile [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 8192 Mar 12 08:06 boinc_mmap_file [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 534 Mar 12 08:06 boinc_task_state.xml [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 7308 Mar 12 08:07 heartbeat.json [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 6140 Mar 12 07:45 init_data.xml [2023-03-12 08:07:57] -rw-r--r--. 2 boinc boinc 406253 Mar 12 07:45 input.tar.gz [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 112 Mar 12 07:45 job.xml [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 1011 Mar 12 08:07 memory_monitor_summary.json [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 1490899 Mar 12 08:06 output.1.5331ef2f-7f4f-415d-b7f7-1d1e0e3add97_56288.pool.root [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 464 Mar 12 08:07 output.list [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 2664 Mar 12 07:46 pandaJob.out [2023-03-12 08:07:57] drwx------. 4 boinc boinc 4096 Mar 12 07:47 pilot3/ [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 395887 Mar 12 07:25 pilot3.tar.gz [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 239618 Mar 12 08:07 pilotlog.txt [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 4239 Mar 12 07:24 queuedata.json [2023-03-12 08:07:57] -rwxr-xr-x. 1 boinc boinc 8343 Mar 12 07:45 run_atlas* [2023-03-12 08:07:57] -rwx------. 1 boinc boinc 26445 Mar 12 07:25 runpilot2-wrapper.sh* [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 407 Mar 12 07:46 runtime_log [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 7026 Mar 12 07:46 runtime_log.err [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 449 Mar 12 07:46 setup.sh.local [2023-03-12 08:07:57] drwxrwx--x. 2 boinc boinc 68 Mar 12 07:45 shared/ [2023-03-12 08:07:57] -rw-r--r--. 2 boinc boinc 17098 Mar 12 07:45 start_atlas.sh [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 2410 Mar 12 07:46 stderr.txt [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 107 Mar 12 07:45 wrapper_26015_x86_64-pc-linux-gnu [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 26 Mar 12 08:06 wrapper_checkpoint.txt [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 127 Mar 12 07:46 zesLDmQKUv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmsCGKDm9rphpm.diag [2023-03-12 08:07:57] 2023-03-12 07:07:09,032 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,033 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,033 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,034 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,034 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,034 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,034 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,034 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,034 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,034 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,034 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,035 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-03-12 08:07:57] 2023-03-12 07:07:09,036 | INFO | pilot.control.job | has_job_completed | job 5780946575 has completed (purged errors) [2023-03-12 08:07:57] 2023-03-12 07:07:09,036 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-03-12 08:07:57] 2023-03-12 07:07:09,036 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-03-12 08:07:57] 2023-03-12 07:07:09,039 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-5780946575 [2023-03-12 08:07:57] 2023-03-12 07:07:10,044 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [100267] [2023-03-12 08:07:57] 2023-03-12 07:07:10,045 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 100267 [2023-03-12 08:07:57] 2023-03-12 07:07:10,045 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-03-12 08:07:57] 2023-03-12 07:07:11,050 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-03-12 08:07:57] 2023-03-12 07:07:11,050 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=100267 [2023-03-12 08:07:57] 2023-03-12 07:07:11,105 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [100267] (in reverse order) [2023-03-12 08:07:57] 2023-03-12 07:07:11,136 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-03-12 08:07:57] 2023-03-12 07:07:11,136 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-03-12 08:07:57] 2023-03-12 07:07:11,137 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-03-12 08:07:57] 2023-03-12 07:07:11,137 | INFO | pilot.control.job | retrieve | ready for new job [2023-03-12 08:07:57] 2023-03-12 07:07:11,137 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-03-12 08:07:57] 2023-03-12 07:07:11,138 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-12 08:07:57] 2023-03-12 07:07:11,138 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.5.1 (14) *** [2023-03-12 08:07:57] 2023-03-12 07:07:11,138 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-12 08:07:57] 2023-03-12 07:07:11,138 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-03-12 08:07:57] 2023-03-12 07:07:11,139 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM [2023-03-12 08:07:57] 2023-03-12 07:07:11,139 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-03-12 08:07:57] 2023-03-12 07:07:11,206 | INFO | pilot.util.auxiliary | display_architecture_info | [2023-03-12 08:07:57] LSB Version: :core-4.1-amd64:core-4.1-noarch [2023-03-12 08:07:57] Distributor ID: CentOS [2023-03-12 08:07:57] Description: CentOS Linux release 7.9.2009 (Core) [2023-03-12 08:07:57] Release: 7.9.2009 [2023-03-12 08:07:57] Codename: Core [2023-03-12 08:07:57] 2023-03-12 07:07:11,206 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-12 08:07:57] 2023-03-12 07:07:11,709 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0 [2023-03-12 08:07:57] 2023-03-12 07:07:11,710 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/0 [2023-03-12 08:07:57] 2023-03-12 07:07:11,724 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-03-12 08:07:57] /dev/mapper/cl-root 45198 11648 33551 26% /var/lib/boinc/slots/0 [2023-03-12 08:07:57] 2023-03-12 07:07:11,724 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-03-12 08:07:57] 2023-03-12 07:07:11,724 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (35180773376 B) [2023-03-12 08:07:57] 2023-03-12 07:07:11,724 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-03-12 08:07:57] 2023-03-12 07:07:11,725 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:11,725 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:11,725 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-03-12 08:07:57] 2023-03-12 07:07:11,779 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:11,779 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:11,924 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-03-12 08:07:57] 2023-03-12 07:07:11,986 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-03-12 08:07:57] 2023-03-12 07:07:11,986 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:11,986 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:12,188 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-03-12 08:07:57] 2023-03-12 07:07:12,188 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:12,188 | INFO | pilot.control.job | control | [job] control thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:12,538 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:12,539 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:12,590 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-03-12 08:07:57] 2023-03-12 07:07:12,590 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:12,590 | INFO | pilot.control.data | control | [data] control thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:12,635 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-03-12 08:07:57] 2023-03-12 07:07:12,676 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:12,676 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:12,726 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:12,726 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:12,875 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:12,875 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:12,876 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:12,876 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:12,876 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:12,876 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:13,020 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:13,020 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:13,935 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-03-12 08:07:57] 2023-03-12 07:07:13,935 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:13,935 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:14,927 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:14,927 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:22,221 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-03-12 08:07:57] 2023-03-12 07:07:22,221 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-03-12 08:07:57] 2023-03-12 07:07:22,221 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-03-12 08:07:57] 2023-03-12 07:07:22,222 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:22,222 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:57,134 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2023-03-12 08:07:57] 2023-03-12 07:07:57,135 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet [2023-03-12 08:07:57] 2023-03-12 07:07:57,135 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-03-12 08:07:57] 2023-03-12 07:07:57,789 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-03-12 08:07:57] 2023-03-12 07:07:57,789 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-03-12 08:07:57] 2023-03-12 07:07:57,789 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-03-12 08:07:57] 2023-03-12 07:07:57,789 | INFO | root | wrap_up | traces error code: 0 [2023-03-12 08:07:57] 2023-03-12 07:07:57,790 | INFO | root | wrap_up | pilot has finished [2023-03-12 08:07:57] 2023-03-12 07:07:57,856 [wrapper] ==== pilot stdout END ==== [2023-03-12 08:07:57] 2023-03-12 07:07:57,858 [wrapper] ==== wrapper stdout RESUME ==== [2023-03-12 08:07:57] 2023-03-12 07:07:57,861 [wrapper] pilotpid: 97207 [2023-03-12 08:07:57] 2023-03-12 07:07:57,864 [wrapper] Pilot exit status: 0 [2023-03-12 08:07:57] 2023-03-12 07:07:57,879 [wrapper] pandaids: 5780946575 [2023-03-12 08:07:57] 2023-03-12 07:07:57,886 [wrapper] apfmon messages muted [2023-03-12 08:07:57] 2023-03-12 07:07:57,888 [wrapper] Test setup, not cleaning [2023-03-12 08:07:57] 2023-03-12 07:07:57,891 [wrapper] ==== wrapper stdout END ==== [2023-03-12 08:07:57] 2023-03-12 07:07:57,894 [wrapper] ==== wrapper stderr END ==== [2023-03-12 08:07:57] 2023-03-12 07:07:57,900 [wrapper] wrapperexiting ec=0, duration=1261 [2023-03-12 08:07:57] 2023-03-12 07:07:57,903 [wrapper] apfmon messages muted [2023-03-12 08:07:57] *** Error codes and diagnostics *** [2023-03-12 08:07:57] "exeErrorCode": 0, [2023-03-12 08:07:57] "exeErrorDiag": "", [2023-03-12 08:07:57] "pilotErrorCode": 0, [2023-03-12 08:07:57] "pilotErrorDiag": "", [2023-03-12 08:07:57] *** Listing of results directory *** [2023-03-12 08:07:57] insgesamt 44692 [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 4239 12. Mär 07:24 queuedata.json [2023-03-12 08:07:57] -rwx------. 1 boinc boinc 26445 12. Mär 07:25 runpilot2-wrapper.sh [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 395887 12. Mär 07:25 pilot3.tar.gz [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 107 12. Mär 07:45 wrapper_26015_x86_64-pc-linux-gnu [2023-03-12 08:07:57] -rwxr-xr-x. 1 boinc boinc 8343 12. Mär 07:45 run_atlas [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 112 12. Mär 07:45 job.xml [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 6140 12. Mär 07:45 init_data.xml [2023-03-12 08:07:57] -rw-r--r--. 2 boinc boinc 38184411 12. Mär 07:45 EVNT.04972714._000028.pool.root.1 [2023-03-12 08:07:57] -rw-r--r--. 2 boinc boinc 17098 12. Mär 07:45 start_atlas.sh [2023-03-12 08:07:57] drwxrwx--x. 2 boinc boinc 68 12. Mär 07:45 shared [2023-03-12 08:07:57] -rw-r--r--. 2 boinc boinc 406253 12. Mär 07:45 input.tar.gz [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 0 12. Mär 07:45 boinc_lockfile [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 2664 12. Mär 07:46 pandaJob.out [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 449 12. Mär 07:46 setup.sh.local [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 969587 12. Mär 07:47 agis_schedconf.cvmfs.json [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 1704527 12. Mär 07:47 agis_ddmendpoints.agis.ALL.json [2023-03-12 08:07:57] drwx------. 4 boinc boinc 4096 12. Mär 07:47 pilot3 [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 1490899 12. Mär 08:06 output.1.5331ef2f-7f4f-415d-b7f7-1d1e0e3add97_56288.pool.root [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 534 12. Mär 08:06 boinc_task_state.xml [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 1011 12. Mär 08:07 memory_monitor_summary.json [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 165801 12. Mär 08:07 5331ef2f-7f4f-415d-b7f7-1d1e0e3add97_56288.1.job.log.tgz [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 7308 12. Mär 08:07 heartbeat.json [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 8192 12. Mär 08:07 boinc_mmap_file [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 26 12. Mär 08:07 wrapper_checkpoint.txt [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 8887 12. Mär 08:07 pilotlog.txt [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 276345 12. Mär 08:07 5331ef2f-7f4f-415d-b7f7-1d1e0e3add97_56288.1.job.log [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 464 12. Mär 08:07 output.list [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 748 12. Mär 08:07 runtime_log [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 1955840 12. Mär 08:07 result.tar.gz [2023-03-12 08:07:57] -rw-------. 1 boinc boinc 625 12. Mär 08:07 zesLDmQKUv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmsCGKDm9rphpm.diag [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 11125 12. Mär 08:07 runtime_log.err [2023-03-12 08:07:57] -rw-r--r--. 1 boinc boinc 30412 12. Mär 08:07 stderr.txt [2023-03-12 08:07:58] HITS file was successfully produced: [2023-03-12 08:07:58] -rw-------. 1 boinc boinc 1490899 12. Mär 08:06 shared/HITS.pool.root.1 [2023-03-12 08:07:58] *** Contents of shared directory: *** [2023-03-12 08:07:58] insgesamt 41080 [2023-03-12 08:07:58] -rw-r--r--. 2 boinc boinc 38184411 12. Mär 07:45 ATLAS.root_0 [2023-03-12 08:07:58] -rw-r--r--. 2 boinc boinc 17098 12. Mär 07:45 start_atlas.sh [2023-03-12 08:07:58] -rw-r--r--. 2 boinc boinc 406253 12. Mär 07:45 input.tar.gz [2023-03-12 08:07:58] -rw-------. 1 boinc boinc 1490899 12. Mär 08:06 HITS.pool.root.1 [2023-03-12 08:07:58] -rw-------. 1 boinc boinc 1955840 12. Mär 08:07 result.tar.gz 08:07:59 (91816): run_atlas exited; CPU time 1036.057106 08:07:59 (91816): called boinc_finish(0) </stderr_txt> ]]>
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