Name | EWhMDmNggv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmEGGKDmj9FV9m_0 |
Workunit | 2286455 |
Created | 12 Mar 2023, 19:37:11 UTC |
Sent | 12 Mar 2023, 19:40:38 UTC |
Report deadline | 19 Mar 2023, 19:40:38 UTC |
Received | 12 Mar 2023, 20:16:06 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4351 |
Run time | 17 min 38 sec |
CPU time | 12 min 46 sec |
Validate state | Valid |
Credit | 11.93 |
Device peak FLOPS | 2.95 GFLOPS |
Application version | ATLAS Simulation v3.00 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.57 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 78.42 MB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 20:58:19 (246087): wrapper (7.7.26015): starting 20:58:19 (246087): wrapper: running run_atlas (--nthreads 1) [2023-03-12 20:58:19] Arguments: --nthreads 1 [2023-03-12 20:58:19] Threads: 1 [2023-03-12 20:58:19] Checking for CVMFS [2023-03-12 20:58:19] Probing /cvmfs/atlas.cern.ch... OK [2023-03-12 20:58:23] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-03-12 20:58:23] Running cvmfs_config stat atlas.cern.ch [2023-03-12 20:58:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-03-12 20:58:24] 2.10.1.0 47382 244 48396 116662 2 80 2835318 4096001 0 130560 0 725275 99.997 22489 57 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1 [2023-03-12 20:58:24] CVMFS is ok [2023-03-12 20:58:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-03-12 20:58:24] Checking for apptainer binary... [2023-03-12 20:58:24] Using apptainer found in PATH at /usr/bin/apptainer [2023-03-12 20:58:24] Running /usr/bin/apptainer --version [2023-03-12 20:58:24] apptainer version 1.1.6-1.el8 [2023-03-12 20:58:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-03-12 20:58:24] fx8s [2023-03-12 20:58:24] apptainer works [2023-03-12 20:59:14] Starting ATLAS job with PandaID=5781417594 [2023-03-12 20:59:14] Try creating a directory in /tmp [2023-03-12 20:59:14] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /tmp/tmp.XXXXX [2023-03-12 20:59:14] /usr/bin/mktemp: failed to create file via template '/tmp/tmp.XXXXX': Read-only file system [2023-03-12 20:59:14] mktemp /tmp failed [2023-03-12 20:59:14] Try creating a directory in /var/tmp [2023-03-12 20:59:14] /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 mktemp /var/tmp/tmp.XXXXX [2023-03-12 20:59:14] /usr/bin/mktemp: failed to create file via template '/var/tmp/tmp.XXXXX': Read-only file system [2023-03-12 20:59:14] mktemp /var/tmp failed [2023-03-12 20:59:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-03-12 21:15:55] *** The last 200 lines of the pilot log: *** [2023-03-12 21:15:55] Hypervisor vendor: KVM [2023-03-12 21:15:55] Virtualization type: full [2023-03-12 21:15:55] L1d cache: 16K [2023-03-12 21:15:55] L1i cache: 64K [2023-03-12 21:15:55] L2 cache: 2048K [2023-03-12 21:15:55] L3 cache: 8192K [2023-03-12 21:15:55] NUMA node0 CPU(s): 0 [2023-03-12 21:15:55] Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt rdtscp lm constant_tsc rep_good nopl nonstop_tsc [2023-03-12 21:15:55] 2023-03-12 20:15:40,983 | INFO | pilot.util.workernode | get_cpu_cores | found 1 cores (1 cores per socket, 1 sockets) [2023-03-12 21:15:55] 2023-03-12 20:15:40,983 | DEBUG | pilot.util.workernode | get_cpu_cores | current model string: AMD FX-8370E Eight-Core Processor 2048 KB [2023-03-12 21:15:55] 2023-03-12 20:15:40,983 | INFO | pilot.util.container | print_executable | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-03-12 21:15:55] 2023-03-12 20:15:41,009 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /var/lib/boinc/slots/0/PanDA_Pilot-5781417594/memory_monitor_summary.json (trf name=prmo [2023-03-12 21:15:55] 2023-03-12 20:15:41,011 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 4.866, 'nthreads': 5.733, 'pss': 1344662.0, 'rchar': 68275311. [2023-03-12 21:15:55] 2023-03-12 20:15:41,011 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-03-12 21:15:55] 2023-03-12 20:15:41,011 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-03-12 21:15:55] 2023-03-12 20:15:41,011 | INFO | pilot.util.timing | timing_report | .............................. [2023-03-12 21:15:55] 2023-03-12 20:15:41,011 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-03-12 21:15:55] 2023-03-12 20:15:41,011 | INFO | pilot.util.timing | timing_report | . get job = 0 s [2023-03-12 21:15:55] 2023-03-12 20:15:41,011 | INFO | pilot.util.timing | timing_report | . initial setup = 9 s [2023-03-12 21:15:55] 2023-03-12 20:15:41,012 | INFO | pilot.util.timing | timing_report | . payload setup = 9 s [2023-03-12 21:15:55] 2023-03-12 20:15:41,012 | INFO | pilot.util.timing | timing_report | . stage-in = 0 s [2023-03-12 21:15:55] 2023-03-12 20:15:41,012 | INFO | pilot.util.timing | timing_report | . payload execution = 908 s [2023-03-12 21:15:55] 2023-03-12 20:15:41,012 | INFO | pilot.util.timing | timing_report | . stage-out = 0 s [2023-03-12 21:15:55] 2023-03-12 20:15:41,012 | INFO | pilot.util.timing | timing_report | .............................. [2023-03-12 21:15:55] 2023-03-12 20:15:41,012 | DEBUG | pilot.control.job | send_state | data={'jobId': '5781417594', 'state': 'finished', 'timestamp': '2023-03-12T21:15:40+01:00', 'siteNam [2023-03-12 21:15:55] 2023-03-12 20:15:41,013 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5781417594', 'state': 'finished', 'timestamp': '2023-03-12T21:15:40 [2023-03-12 21:15:55] 2023-03-12 20:15:41,013 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/0/heartbeat.json [2023-03-12 21:15:55] 2023-03-12 20:15:41,342 | INFO | pilot.control.job | make_job_report | [2023-03-12 21:15:55] 2023-03-12 20:15:41,342 | INFO | pilot.control.job | make_job_report | job summary report [2023-03-12 21:15:55] 2023-03-12 20:15:41,342 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-03-12 21:15:55] 2023-03-12 20:15:41,342 | INFO | pilot.control.job | make_job_report | PanDA job id: 5781417594 [2023-03-12 21:15:55] 2023-03-12 20:15:41,342 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-03-12 21:15:55] 2023-03-12 20:15:41,343 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-03-12 21:15:55] 2023-03-12 20:15:41,343 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-03-12 21:15:55] 2023-03-12 20:15:41,343 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-03-12 21:15:55] 2023-03-12 20:15:41,343 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-03-12 21:15:55] 2023-03-12 20:15:41,343 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-03-12 21:15:55] 2023-03-12 20:15:41,343 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-03-12 21:15:55] 2023-03-12 20:15:41,343 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 778 s [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | pid: 254525 [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | pgrp: 254525 [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | corecount: 1 [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | event service: False [2023-03-12 21:15:55] 2023-03-12 20:15:41,344 | INFO | pilot.control.job | make_job_report | sizes: {0: 2536922, 1: 2537327, 921: 2557664, 922: 2566714, 924: 2566770, 927: 2566992} [2023-03-12 21:15:55] 2023-03-12 20:15:41,345 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-03-12 21:15:55] 2023-03-12 20:15:41,345 | INFO | pilot.control.job | make_job_report | [2023-03-12 21:15:55] 2023-03-12 20:15:41,345 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/0: [2023-03-12 21:15:55] [2023-03-12 21:15:55] 2023-03-12 20:15:41,345 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/0 [2023-03-12 21:15:55] 2023-03-12 20:15:41,363 | DEBUG | pilot.control.job | has_job_completed | total 42600 [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 37738636 Mar 12 20:58 EVNT.04972714._000024.pool.root.1 [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 127 Mar 12 20:59 EWhMDmNggv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmEGGKDmj9FV9m.diag [2023-03-12 21:15:55] drwxrwx---. 2 boinc boinc 4096 Mar 12 21:15 PanDA_Pilot-5781417594/ [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1704527 Mar 12 21:00 agis_ddmendpoints.agis.ALL.json [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 969572 Mar 12 21:00 agis_schedconf.cvmfs.json [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 0 Mar 12 20:58 boinc_lockfile [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 8192 Mar 12 21:15 boinc_mmap_file [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 533 Mar 12 21:15 boinc_task_state.xml [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 226018 Mar 12 21:15 ced7d0f7-1163-4bf4-9115-fd5b83039333_52965.1.job.log [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 163483 Mar 12 21:15 ced7d0f7-1163-4bf4-9115-fd5b83039333_52965.1.job.log.tgz [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 6574 Mar 12 21:15 heartbeat.json [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 6140 Mar 12 20:58 init_data.xml [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 406254 Mar 12 20:58 input.tar.gz [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 112 Mar 12 20:58 job.xml [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1010 Mar 12 21:15 memory_monitor_summary.json [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1421175 Mar 12 21:15 output.1.ced7d0f7-1163-4bf4-9115-fd5b83039333_52965.pool.root [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 464 Mar 12 21:15 output.list [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 2663 Mar 12 20:59 pandaJob.out [2023-03-12 21:15:55] drwx------. 4 boinc boinc 4096 Mar 12 21:00 pilot3/ [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 395887 Mar 12 20:37 pilot3.tar.gz [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 206211 Mar 12 21:15 pilotlog.txt [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 4239 Mar 12 20:37 queuedata.json [2023-03-12 21:15:55] -rwxr-xr-x. 1 boinc boinc 8343 Mar 12 20:58 run_atlas* [2023-03-12 21:15:55] -rwx------. 1 boinc boinc 26445 Mar 12 20:37 runpilot2-wrapper.sh* [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 407 Mar 12 20:59 runtime_log [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 7026 Mar 12 20:59 runtime_log.err [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 449 Mar 12 20:59 setup.sh.local [2023-03-12 21:15:55] drwxrwx--x. 2 boinc boinc 68 Mar 12 20:58 shared/ [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 17098 Mar 12 20:58 start_atlas.sh [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 2416 Mar 12 20:59 stderr.txt [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 107 Mar 12 20:58 wrapper_26015_x86_64-pc-linux-gnu [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 25 Mar 12 21:15 wrapper_checkpoint.txt [2023-03-12 21:15:55] 2023-03-12 20:15:41,364 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,364 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,364 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,364 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,364 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,364 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,364 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,364 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,365 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,366 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-03-12 21:15:55] 2023-03-12 20:15:41,366 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,366 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-03-12 21:15:55] 2023-03-12 20:15:41,366 | INFO | pilot.control.job | has_job_completed | job 5781417594 has completed (purged errors) [2023-03-12 21:15:55] 2023-03-12 20:15:41,366 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-03-12 21:15:55] 2023-03-12 20:15:41,366 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-03-12 21:15:55] 2023-03-12 20:15:41,369 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-5781417594 [2023-03-12 21:15:55] 2023-03-12 20:15:42,374 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [254525] [2023-03-12 21:15:55] 2023-03-12 20:15:42,374 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 254525 [2023-03-12 21:15:55] 2023-03-12 20:15:42,374 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-03-12 21:15:55] 2023-03-12 20:15:43,376 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-03-12 21:15:55] 2023-03-12 20:15:43,376 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=254525 [2023-03-12 21:15:55] 2023-03-12 20:15:43,431 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [254525] (in reverse order) [2023-03-12 21:15:55] 2023-03-12 20:15:43,462 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-03-12 21:15:55] 2023-03-12 20:15:43,463 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-03-12 21:15:55] 2023-03-12 20:15:43,463 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-03-12 21:15:55] 2023-03-12 20:15:43,463 | INFO | pilot.control.job | retrieve | ready for new job [2023-03-12 21:15:55] 2023-03-12 20:15:43,463 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-03-12 21:15:55] 2023-03-12 20:15:43,464 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-12 21:15:55] 2023-03-12 20:15:43,464 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.5.1 (14) *** [2023-03-12 21:15:55] 2023-03-12 20:15:43,465 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-12 21:15:55] 2023-03-12 20:15:43,465 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-03-12 21:15:55] 2023-03-12 20:15:43,465 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM [2023-03-12 21:15:55] 2023-03-12 20:15:43,465 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-03-12 21:15:55] 2023-03-12 20:15:43,526 | INFO | pilot.util.auxiliary | display_architecture_info | [2023-03-12 21:15:55] LSB Version: :core-4.1-amd64:core-4.1-noarch [2023-03-12 21:15:55] Distributor ID: CentOS [2023-03-12 21:15:55] Description: CentOS Linux release 7.9.2009 (Core) [2023-03-12 21:15:55] Release: 7.9.2009 [2023-03-12 21:15:55] Codename: Core [2023-03-12 21:15:55] 2023-03-12 20:15:43,526 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************** [2023-03-12 21:15:55] 2023-03-12 20:15:44,029 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0 [2023-03-12 21:15:55] 2023-03-12 20:15:44,030 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/0 [2023-03-12 21:15:55] 2023-03-12 20:15:44,044 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-03-12 21:15:55] /dev/mapper/cl-root 45198 11756 33443 27% /var/lib/boinc/slots/0 [2023-03-12 21:15:55] 2023-03-12 20:15:44,044 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-03-12 21:15:55] 2023-03-12 20:15:44,045 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (35067527168 B) [2023-03-12 21:15:55] 2023-03-12 20:15:44,045 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-03-12 21:15:55] 2023-03-12 20:15:44,045 | DEBUG | pilot.control.job | retrieve | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,045 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:44,082 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-03-12 21:15:55] 2023-03-12 20:15:44,118 | DEBUG | pilot.control.payload | execute_payloads | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,119 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:44,146 | DEBUG | pilot.control.job | create_data_payload | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,146 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:44,352 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-03-12 21:15:55] 2023-03-12 20:15:44,360 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-03-12 21:15:55] 2023-03-12 20:15:44,499 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-03-12 21:15:55] 2023-03-12 20:15:44,499 | DEBUG | pilot.control.payload | control | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,499 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:44,601 | DEBUG | pilot.control.job | validate | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,601 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:44,623 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-03-12 21:15:55] 2023-03-12 20:15:44,623 | DEBUG | pilot.control.job | control | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,623 | INFO | pilot.control.job | control | [job] control thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:44,852 | DEBUG | pilot.control.payload | validate_post | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,853 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:44,872 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-03-12 21:15:55] 2023-03-12 20:15:44,872 | DEBUG | pilot.control.data | control | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,872 | INFO | pilot.control.data | control | [data] control thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:44,951 | DEBUG | pilot.control.payload | failed_post | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:44,951 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:45,083 | DEBUG | pilot.control.payload | validate_pre | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:45,083 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:45,083 | DEBUG | pilot.control.data | copytool_out | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:45,084 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:45,355 | DEBUG | pilot.control.data | copytool_in | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:45,355 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:46,148 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-03-12 21:15:55] 2023-03-12 20:15:46,148 | DEBUG | pilot.control.job | queue_monitor | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:46,149 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:47,354 | DEBUG | pilot.control.data | queue_monitoring | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:47,354 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:48,505 | WARNING | pilot.control.job | check_job_monitor_waiting_time | no jobs in monitored_payloads queue (waited for 73 s) [2023-03-12 21:15:55] 2023-03-12 20:15:48,505 | DEBUG | pilot.control.job | job_monitor | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:48,505 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:54,175 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-03-12 21:15:55] 2023-03-12 20:15:54,175 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-03-12 21:15:55] 2023-03-12 20:15:54,175 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-03-12 21:15:55] 2023-03-12 20:15:54,175 | DEBUG | pilot.control.payload | run_realtimelog | will not set job_aborted yet [2023-03-12 21:15:55] 2023-03-12 20:15:54,175 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-03-12 21:15:55] 2023-03-12 20:15:54,978 | DEBUG | pilot.util.processes | threads_aborted | aborting since only the main Pilot thread is still running (total thread count=1 with 0 daemon threa [2023-03-12 21:15:55] 2023-03-12 20:15:54,978 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-03-12 21:15:55] 2023-03-12 20:15:54,978 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-03-12 21:15:55] 2023-03-12 20:15:54,978 | INFO | root | wrap_up | traces error code: 0 [2023-03-12 21:15:55] 2023-03-12 20:15:54,979 | INFO | root | wrap_up | pilot has finished [2023-03-12 21:15:55] 2023-03-12 20:15:55,049 [wrapper] ==== pilot stdout END ==== [2023-03-12 21:15:55] 2023-03-12 20:15:55,051 [wrapper] ==== wrapper stdout RESUME ==== [2023-03-12 21:15:55] 2023-03-12 20:15:55,054 [wrapper] pilotpid: 251464 [2023-03-12 21:15:55] 2023-03-12 20:15:55,056 [wrapper] Pilot exit status: 0 [2023-03-12 21:15:55] 2023-03-12 20:15:55,071 [wrapper] pandaids: 5781417594 [2023-03-12 21:15:55] 2023-03-12 20:15:55,077 [wrapper] apfmon messages muted [2023-03-12 21:15:55] 2023-03-12 20:15:55,080 [wrapper] Test setup, not cleaning [2023-03-12 21:15:55] 2023-03-12 20:15:55,083 [wrapper] ==== wrapper stdout END ==== [2023-03-12 21:15:55] 2023-03-12 20:15:55,086 [wrapper] ==== wrapper stderr END ==== [2023-03-12 21:15:55] 2023-03-12 20:15:55,093 [wrapper] wrapperexiting ec=0, duration=1001 [2023-03-12 21:15:55] 2023-03-12 20:15:55,096 [wrapper] apfmon messages muted [2023-03-12 21:15:55] *** Error codes and diagnostics *** [2023-03-12 21:15:55] "exeErrorCode": 0, [2023-03-12 21:15:55] "exeErrorDiag": "", [2023-03-12 21:15:55] "pilotErrorCode": 0, [2023-03-12 21:15:55] "pilotErrorDiag": "", [2023-03-12 21:15:55] *** Listing of results directory *** [2023-03-12 21:15:55] insgesamt 44040 [2023-03-12 21:15:55] -rwx------. 1 boinc boinc 26445 12. Mär 20:37 runpilot2-wrapper.sh [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 4239 12. Mär 20:37 queuedata.json [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 395887 12. Mär 20:37 pilot3.tar.gz [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 107 12. Mär 20:58 wrapper_26015_x86_64-pc-linux-gnu [2023-03-12 21:15:55] -rwxr-xr-x. 1 boinc boinc 8343 12. Mär 20:58 run_atlas [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 112 12. Mär 20:58 job.xml [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 37738636 12. Mär 20:58 EVNT.04972714._000024.pool.root.1 [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 17098 12. Mär 20:58 start_atlas.sh [2023-03-12 21:15:55] drwxrwx--x. 2 boinc boinc 68 12. Mär 20:58 shared [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 406254 12. Mär 20:58 input.tar.gz [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 6140 12. Mär 20:58 init_data.xml [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 0 12. Mär 20:58 boinc_lockfile [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 2663 12. Mär 20:59 pandaJob.out [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 449 12. Mär 20:59 setup.sh.local [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 969572 12. Mär 21:00 agis_schedconf.cvmfs.json [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1704527 12. Mär 21:00 agis_ddmendpoints.agis.ALL.json [2023-03-12 21:15:55] drwx------. 4 boinc boinc 4096 12. Mär 21:00 pilot3 [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1421175 12. Mär 21:15 output.1.ced7d0f7-1163-4bf4-9115-fd5b83039333_52965.pool.root [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 25 12. Mär 21:15 wrapper_checkpoint.txt [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 8192 12. Mär 21:15 boinc_mmap_file [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1010 12. Mär 21:15 memory_monitor_summary.json [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 533 12. Mär 21:15 boinc_task_state.xml [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 163483 12. Mär 21:15 ced7d0f7-1163-4bf4-9115-fd5b83039333_52965.1.job.log.tgz [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 6574 12. Mär 21:15 heartbeat.json [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 8887 12. Mär 21:15 pilotlog.txt [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 242939 12. Mär 21:15 ced7d0f7-1163-4bf4-9115-fd5b83039333_52965.1.job.log [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 464 12. Mär 21:15 output.list [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 748 12. Mär 21:15 runtime_log [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1843200 12. Mär 21:15 result.tar.gz [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 11125 12. Mär 21:15 runtime_log.err [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 625 12. Mär 21:15 EWhMDmNggv2n7Olcko1bjSoqABFKDmABFKDm7AsVDmEGGKDmj9FV9m.diag [2023-03-12 21:15:55] -rw-r--r--. 1 boinc boinc 30415 12. Mär 21:15 stderr.txt [2023-03-12 21:15:55] HITS file was successfully produced: [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1421175 12. Mär 21:15 shared/HITS.pool.root.1 [2023-03-12 21:15:55] *** Contents of shared directory: *** [2023-03-12 21:15:55] insgesamt 40464 [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 37738636 12. Mär 20:58 ATLAS.root_0 [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 17098 12. Mär 20:58 start_atlas.sh [2023-03-12 21:15:55] -rw-r--r--. 2 boinc boinc 406254 12. Mär 20:58 input.tar.gz [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1421175 12. Mär 21:15 HITS.pool.root.1 [2023-03-12 21:15:55] -rw-------. 1 boinc boinc 1843200 12. Mär 21:15 result.tar.gz 21:15:56 (246087): run_atlas exited; CPU time 766.397060 21:15:56 (246087): called boinc_finish(0) </stderr_txt> ]]>
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