Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-14 22:10:37 (21236): Detected: vboxwrapper 26206
2023-03-14 22:10:37 (21236): Detected: BOINC client v7.20.2
2023-03-14 22:10:38 (21236): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2023-03-14 22:10:38 (21236): Successfully copied 'init_data.xml' to the shared directory.
2023-03-14 22:10:38 (21236): Create VM. (boinc_85b20925a9e018f3, slot#1)
2023-03-14 22:10:39 (21236): Setting Memory Size for VM. (7500MB)
2023-03-14 22:10:39 (21236): Setting CPU Count for VM. (5)
2023-03-14 22:10:40 (21236): Setting Chipset Options for VM.
2023-03-14 22:10:40 (21236): Setting Graphics Controller Options for VM.
2023-03-14 22:10:40 (21236): Setting Boot Options for VM.
2023-03-14 22:10:40 (21236): Setting Network Configuration for NAT.
2023-03-14 22:10:41 (21236): Enabling VM Network Access.
2023-03-14 22:10:41 (21236): Disabling USB Support for VM.
2023-03-14 22:10:41 (21236): Disabling COM Port Support for VM.
2023-03-14 22:10:41 (21236): Disabling LPT Port Support for VM.
2023-03-14 22:10:42 (21236): Disabling Audio Support for VM.
2023-03-14 22:10:42 (21236): Disabling Clipboard Support for VM.
2023-03-14 22:10:42 (21236): Disabling Drag and Drop Support for VM.
2023-03-14 22:10:42 (21236): Adding storage controller(s) to VM.
2023-03-14 22:10:43 (21236): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-14 22:10:43 (21236): Adding VirtualBox Guest Additions to VM.
2023-03-14 22:10:44 (21236): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-14 22:10:44 (21236): forwarding host port 61083 to guest port 80
2023-03-14 22:10:44 (21236): Enabling remote desktop for VM.
2023-03-14 22:10:45 (21236): Enabling shared directory for VM.
2023-03-14 22:10:45 (21236): Starting VM using VBoxManage interface. (boinc_85b20925a9e018f3, slot#1)
2023-03-14 22:10:52 (21236): Successfully started VM. (PID = '13144')
2023-03-14 22:10:52 (21236): Reporting VM Process ID to BOINC.
2023-03-14 22:10:52 (21236): Guest Log: BIOS: VirtualBox 6.1.40
2023-03-14 22:10:52 (21236): Guest Log: CPUID EDX: 0x178bfbff
2023-03-14 22:10:52 (21236): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-14 22:10:52 (21236): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-14 22:10:52 (21236): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-14 22:10:52 (21236): Detected: Web Application Enabled (http://localhost:61083)
2023-03-14 22:10:52 (21236): Detected: Remote Desktop Enabled (localhost:61084)
2023-03-14 22:10:52 (21236): Preference change detected
2023-03-14 22:10:52 (21236): Setting CPU throttle for VM. (100%)
2023-03-14 22:10:52 (21236): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-14 22:10:54 (21236): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-14 22:10:54 (21236): Guest Log: BIOS: Booting from Hard Disk...
2023-03-14 22:10:57 (21236): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-14 22:10:57 (21236): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-14 22:10:57 (21236): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-14 22:11:07 (21236): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-14 22:11:07 (21236): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-14 22:11:22 (21236): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-14 22:11:22 (21236): Guest Log: 00:00:00.000176 main     Log opened 2023-03-14T22:11:20.041286000Z
2023-03-14 22:11:22 (21236): Guest Log: 00:00:00.000288 main     OS Product: Linux
2023-03-14 22:11:22 (21236): Guest Log: 00:00:00.000327 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-14 22:11:22 (21236): Guest Log: 00:00:00.000359 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-14 22:11:22 (21236): Guest Log: 00:00:00.000391 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-14 22:11:22 (21236): Guest Log: 00:00:00.000392 main     Process ID: 1413
2023-03-14 22:11:22 (21236): Guest Log: 00:00:00.000393 main     Package type: LINUX_64BITS_GENERIC
2023-03-14 22:11:22 (21236): Guest Log: 00:00:00.001387 main     5.2.32 r132073 started. Verbose level = 0
2023-03-14 22:11:22 (21236): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-14 22:11:22 (21236): Guest Log: [INFO] Mounting shared directory
2023-03-14 22:11:22 (21236): Guest Log: [INFO] Checking for init_data.xml
2023-03-14 22:11:29 (21236): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-14 22:11:29 (21236): Guest Log: [INFO] Detected branch: dev
2023-03-14 22:11:29 (21236): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-14 22:11:29 (21236): Guest Log: Copying input files
2023-03-14 22:11:32 (21236): Guest Log: 00:00:10.004706 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 453 571 000ns (GuestNow=1 678 828 291 591 580 000 ns GuestLast=1 678 831 880 045 151 000 ns fSetTimeLastLoop=true )
2023-03-14 22:11:33 (21236): Guest Log: Copied input files into RunAtlas.
2023-03-14 22:11:33 (21236): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-14 22:11:33 (21236): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-14 22:11:33 (21236): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-14 22:11:33 (21236): Guest Log: Further information can be found at the LHC@home message board.
2023-03-14 22:11:43 (21236): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-14 22:11:43 (21236): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-14 22:11:43 (21236): Guest Log: 2.6.3.0 1691 0 30188 116745 4 1 3116421 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-03-14 22:11:45 (21236): Guest Log: copied the webapp to /var/www
2023-03-14 22:11:45 (21236): Guest Log: ATHENA_PROC_NUMBER=5
2023-03-14 22:11:45 (21236): Guest Log: ATHENA_CORE_NUMBER=5
2023-03-14 22:11:46 (21236): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-14 22:11:46 (21236): Guest Log:  *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) ***
2023-03-14 22:48:38 (21236): Preference change detected
2023-03-14 22:48:39 (21236): Setting CPU throttle for VM. (100%)
2023-03-14 22:48:39 (21236): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-14 23:06:03 (21236): Guest Log:  *** Job finished ***
2023-03-14 23:06:03 (21236): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:05:11,627 | INFO     | [job] queue monitor thread has finished
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:05:14,578 | INFO     | [data] queue_monitor thread has finished
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:05:19,802 | INFO     | job.realtimelogging is not enabled
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:05:19,802 | INFO     | [payload] run_realtimelog thread has finished
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:05:59,889 | WARNING  | no jobs in monitored_payloads queue (waited for 61 s)
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:05:59,890 | INFO     | [job] job monitor thread has finished
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:00,206 | INFO     | end of generic workflow (traces error code: 0)
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:00,206 | INFO     | traces error code: 0
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:00,206 | INFO     | pilot has finished
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:00,266 [wrapper] ==== pilot stdout END ====
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:00,273 [wrapper] ==== wrapper stdout RESUME ====
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:00,280 [wrapper] pilotpid: 5516
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:00,287 [wrapper] Pilot exit status: 0
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:01,316 [wrapper] pandaids: 5753961892
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:01,346 [wrapper] apfmon messages muted
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:01,353 [wrapper] Test setup, not cleaning
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:01,359 [wrapper] ==== wrapper stdout END ====
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:01,367 [wrapper] ==== wrapper stderr END ====
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:01,382 [wrapper] wrapperexiting ec=0, duration=3252
2023-03-14 23:06:03 (21236): Guest Log: 2023-03-14 22:06:01,390 [wrapper] apfmon messages muted
2023-03-14 23:06:03 (21236): Guest Log:  *** Error codes and diagnostics ***
2023-03-14 23:06:03 (21236): Guest Log:     "exeErrorCode": 0,
2023-03-14 23:06:03 (21236): Guest Log:     "exeErrorDiag": "",
2023-03-14 23:06:03 (21236): Guest Log:     "pilotErrorCode": 0,
2023-03-14 23:06:03 (21236): Guest Log:     "pilotErrorDiag": "",
2023-03-14 23:06:03 (21236): Guest Log:  *** Listing of results directory ***
2023-03-14 23:06:03 (21236): Guest Log: total 33340
2023-03-14 23:06:03 (21236): Guest Log: -rw-r--r--. 1 atlas atlas   386707 Mar 14 17:53 pilot3.tar.gz
2023-03-14 23:06:03 (21236): Guest Log: -rw-r--r--. 1 atlas atlas     4301 Mar 14 18:27 queuedata.json
2023-03-14 23:06:03 (21236): Guest Log: -rwx------. 1 atlas atlas    26447 Mar 14 18:27 runpilot2-wrapper.sh
2023-03-14 23:06:03 (21236): Guest Log: -rwxr-xr-x. 1 atlas atlas    17195 Mar 14 21:11 start_atlas.sh
2023-03-14 23:06:03 (21236): Guest Log: -rwxr-xr-x. 1 atlas atlas   398332 Mar 14 21:11 input.tar.gz
2023-03-14 23:06:03 (21236): Guest Log: -rwxr-xr-x. 1 atlas atlas     8786 Mar 14 21:11 init_data.xml
2023-03-14 23:06:03 (21236): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Mar 14 21:11 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0
2023-03-14 23:06:03 (21236): Guest Log: -rw-r--r--. 1 atlas atlas     2544 Mar 14 21:11 pandaJob.out
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas      354 Mar 14 21:11 setup.sh.local
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas  1425857 Mar 14 21:14 cric_ddmendpoints.json
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas   966147 Mar 14 21:14 agis_schedconf.cvmfs.json
2023-03-14 23:06:03 (21236): Guest Log: drwx------. 4 atlas atlas      245 Mar 14 21:15 pilot3
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas 30047106 Mar 14 21:59 HITS.32413688._000229-67667-1678818460.pool.root.1
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas     1016 Mar 14 21:59 memory_monitor_summary.json
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas   218256 Mar 14 22:01 log.32413688._000229-67667-1678818460.job.log.tgz.1
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas     7675 Mar 14 22:05 heartbeat.json
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas     3018 Mar 14 22:06 pilotlog.txt
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas   160072 Mar 14 22:06 log.32413688._000229-67667-1678818460.job.log.1
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas      396 Mar 14 22:06 output.list
2023-03-14 23:06:03 (21236): Guest Log: -rw-r--r--. 1 atlas atlas      671 Mar 14 22:06 runtime_log
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas   399360 Mar 14 22:06 result.tar.gz
2023-03-14 23:06:03 (21236): Guest Log: -rw-r--r--. 1 atlas atlas    10378 Mar 14 22:06 runtime_log.err
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas      633 Mar 14 22:06 bMyKDmIYOw2n7Olcko1bjSoqABFKDmABFKDm7AsVDmaMGKDmEZlymn.diag
2023-03-14 23:06:03 (21236): Guest Log: Looking for outputfile HITS.32413688._000229-67667-1678818460.pool.root.1
2023-03-14 23:06:03 (21236): Guest Log: HITS file was successfully produced
2023-03-14 23:06:03 (21236): Guest Log: -rw-------. 1 atlas atlas 30047106 Mar 14 21:59 /home/atlas/RunAtlas/HITS.32413688._000229-67667-1678818460.pool.root.1
2023-03-14 23:06:04 (21236): Guest Log: Successfully finished the ATLAS job!
2023-03-14 23:06:04 (21236): Guest Log: Copying the results back to the shared directory!
2023-03-14 23:06:04 (21236): Guest Log:  *** Contents of shared directory: ***
2023-03-14 23:06:04 (21236): Guest Log: total 456316
2023-03-14 23:06:04 (21236): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 14 21:10 ATLAS.root_0
2023-03-14 23:06:04 (21236): Guest Log: -rwxrwxrwx. 1 root root  30047106 Mar 14 21:59 HITS.pool.root.1
2023-03-14 23:06:04 (21236): Guest Log: -rwxrwxrwx. 1 root root      8786 Mar 14 21:10 init_data.xml
2023-03-14 23:06:04 (21236): Guest Log: -rwxrwxrwx. 1 root root    398332 Mar 14 19:13 input.tar.gz
2023-03-14 23:06:04 (21236): Guest Log: -rwxrwxrwx. 1 root root    399360 Mar 14  2023 result.tar.gz
2023-03-14 23:06:04 (21236): Guest Log: -rwxrwxrwx. 1 root root     17195 Mar 14 19:13 start_atlas.sh
2023-03-14 23:06:04 (21236): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-14 23:06:04 (21236): VM Completion File Detected.
2023-03-14 23:06:04 (21236): Powering off VM.
2023-03-14 23:06:06 (21236): Successfully stopped VM.
2023-03-14 23:06:06 (21236): Deregistering VM. (boinc_85b20925a9e018f3, slot#1)
2023-03-14 23:06:06 (21236): Removing network bandwidth throttle group from VM.
2023-03-14 23:06:07 (21236): Removing VM from VirtualBox.
23:06:12 (21236): called boinc_finish(0)

</stderr_txt>
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