Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-15 05:57:56 (19588): Detected: vboxwrapper 26206
2023-03-15 05:57:56 (19588): Detected: BOINC client v7.20.2
2023-03-15 05:57:56 (19588): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2023-03-15 05:57:57 (19588): Successfully copied 'init_data.xml' to the shared directory.
2023-03-15 05:57:57 (19588): Create VM. (boinc_87fee7cf90252eea, slot#1)
2023-03-15 05:57:58 (19588): Setting Memory Size for VM. (7500MB)
2023-03-15 05:57:58 (19588): Setting CPU Count for VM. (5)
2023-03-15 05:57:58 (19588): Setting Chipset Options for VM.
2023-03-15 05:57:59 (19588): Setting Graphics Controller Options for VM.
2023-03-15 05:57:59 (19588): Setting Boot Options for VM.
2023-03-15 05:57:59 (19588): Setting Network Configuration for NAT.
2023-03-15 05:57:59 (19588): Enabling VM Network Access.
2023-03-15 05:58:00 (19588): Disabling USB Support for VM.
2023-03-15 05:58:00 (19588): Disabling COM Port Support for VM.
2023-03-15 05:58:00 (19588): Disabling LPT Port Support for VM.
2023-03-15 05:58:00 (19588): Disabling Audio Support for VM.
2023-03-15 05:58:01 (19588): Disabling Clipboard Support for VM.
2023-03-15 05:58:01 (19588): Disabling Drag and Drop Support for VM.
2023-03-15 05:58:01 (19588): Adding storage controller(s) to VM.
2023-03-15 05:58:01 (19588): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-15 05:58:02 (19588): Adding VirtualBox Guest Additions to VM.
2023-03-15 05:58:02 (19588): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-15 05:58:03 (19588): forwarding host port 64809 to guest port 80
2023-03-15 05:58:03 (19588): Enabling remote desktop for VM.
2023-03-15 05:58:03 (19588): Enabling shared directory for VM.
2023-03-15 05:58:04 (19588): Starting VM using VBoxManage interface. (boinc_87fee7cf90252eea, slot#1)
2023-03-15 05:58:11 (19588): Successfully started VM. (PID = '19696')
2023-03-15 05:58:11 (19588): Reporting VM Process ID to BOINC.
2023-03-15 05:58:11 (19588): Guest Log: BIOS: VirtualBox 6.1.40
2023-03-15 05:58:11 (19588): Guest Log: CPUID EDX: 0x178bfbff
2023-03-15 05:58:11 (19588): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-15 05:58:11 (19588): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-15 05:58:11 (19588): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-15 05:58:11 (19588): Detected: Web Application Enabled (http://localhost:64809)
2023-03-15 05:58:11 (19588): Detected: Remote Desktop Enabled (localhost:64810)
2023-03-15 05:58:11 (19588): Preference change detected
2023-03-15 05:58:11 (19588): Setting CPU throttle for VM. (100%)
2023-03-15 05:58:11 (19588): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-15 05:58:13 (19588): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-15 05:58:13 (19588): Guest Log: BIOS: Booting from Hard Disk...
2023-03-15 05:58:16 (19588): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-15 05:58:16 (19588): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-15 05:58:16 (19588): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-15 05:58:25 (19588): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-15 05:58:25 (19588): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-15 05:58:40 (19588): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-15 05:58:40 (19588): Guest Log: 00:00:00.000180 main     Log opened 2023-03-15T05:58:38.308583000Z
2023-03-15 05:58:40 (19588): Guest Log: 00:00:00.000281 main     OS Product: Linux
2023-03-15 05:58:40 (19588): Guest Log: 00:00:00.000315 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-15 05:58:40 (19588): Guest Log: 00:00:00.000356 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-15 05:58:40 (19588): Guest Log: 00:00:00.000393 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-15 05:58:40 (19588): Guest Log: 00:00:00.000394 main     Process ID: 1413
2023-03-15 05:58:40 (19588): Guest Log: 00:00:00.000394 main     Package type: LINUX_64BITS_GENERIC
2023-03-15 05:58:40 (19588): Guest Log: 00:00:00.001583 main     5.2.32 r132073 started. Verbose level = 0
2023-03-15 05:58:40 (19588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-15 05:58:40 (19588): Guest Log: [INFO] Mounting shared directory
2023-03-15 05:58:41 (19588): Guest Log: [INFO] Checking for init_data.xml
2023-03-15 05:58:45 (19588): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-15 05:58:45 (19588): Guest Log: [INFO] Detected branch: dev
2023-03-15 05:58:45 (19588): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-15 05:58:45 (19588): Guest Log: Copying input files
2023-03-15 05:58:48 (19588): Guest Log: Copied input files into RunAtlas.
2023-03-15 05:58:48 (19588): Guest Log: Detected user-configured HTTP proxy at http://10.116.178.201:3128 - will set in /etc/cvmfs/default.local
2023-03-15 05:58:50 (19588): Guest Log: 00:00:10.005145 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 643 471 000ns (GuestNow=1 678 856 329 669 006 000 ns GuestLast=1 678 859 918 312 477 000 ns fSetTimeLastLoop=true )
2023-03-15 05:58:58 (19588): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-15 05:58:58 (19588): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-15 05:58:58 (19588): Guest Log: 2.6.3.0 1688 0 31652 116757 4 1 3116421 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
2023-03-15 05:59:00 (19588): Guest Log: copied the webapp to /var/www
2023-03-15 05:59:00 (19588): Guest Log: ATHENA_PROC_NUMBER=5
2023-03-15 05:59:00 (19588): Guest Log: ATHENA_CORE_NUMBER=5
2023-03-15 05:59:00 (19588): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-15 05:59:00 (19588): Guest Log:  *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) ***
2023-03-15 06:50:14 (19588): Guest Log:  *** Job finished ***
2023-03-15 06:50:14 (19588): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:49:46,309 | INFO     | [job] queue monitor thread has finished
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:49:48,108 | INFO     | [data] queue_monitor thread has finished
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:49:54,825 | INFO     | job.realtimelogging is not enabled
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:49:54,826 | INFO     | [payload] run_realtimelog thread has finished
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:11,966 | WARNING  | no jobs in monitored_payloads queue (waited for 61 s)
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:11,967 | INFO     | [job] job monitor thread has finished
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,703 | INFO     | end of generic workflow (traces error code: 0)
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,703 | INFO     | traces error code: 0
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,703 | INFO     | pilot has finished
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,782 [wrapper] ==== pilot stdout END ====
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,796 [wrapper] ==== wrapper stdout RESUME ====
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,804 [wrapper] pilotpid: 5516
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,811 [wrapper] Pilot exit status: 0
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,899 [wrapper] pandaids: 5753961892
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,915 [wrapper] apfmon messages muted
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,923 [wrapper] Test setup, not cleaning
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,930 [wrapper] ==== wrapper stdout END ====
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,938 [wrapper] ==== wrapper stderr END ====
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,953 [wrapper] wrapperexiting ec=0, duration=3069
2023-03-15 06:50:14 (19588): Guest Log: 2023-03-15 05:50:12,960 [wrapper] apfmon messages muted
2023-03-15 06:50:14 (19588): Guest Log:  *** Error codes and diagnostics ***
2023-03-15 06:50:14 (19588): Guest Log:     "exeErrorCode": 0,
2023-03-15 06:50:14 (19588): Guest Log:     "exeErrorDiag": "",
2023-03-15 06:50:14 (19588): Guest Log:     "pilotErrorCode": 0,
2023-03-15 06:50:14 (19588): Guest Log:     "pilotErrorDiag": "",
2023-03-15 06:50:14 (19588): Guest Log:  *** Listing of results directory ***
2023-03-15 06:50:14 (19588): Guest Log: total 33324
2023-03-15 06:50:14 (19588): Guest Log: -rw-r--r--. 1 atlas atlas   386707 Mar 14 17:53 pilot3.tar.gz
2023-03-15 06:50:14 (19588): Guest Log: -rw-r--r--. 1 atlas atlas     4301 Mar 14 18:27 queuedata.json
2023-03-15 06:50:14 (19588): Guest Log: -rwx------. 1 atlas atlas    26447 Mar 14 18:30 runpilot2-wrapper.sh
2023-03-15 06:50:14 (19588): Guest Log: -rwxr-xr-x. 1 atlas atlas    17195 Mar 15 04:58 start_atlas.sh
2023-03-15 06:50:14 (19588): Guest Log: -rwxr-xr-x. 1 atlas atlas   398334 Mar 15 04:58 input.tar.gz
2023-03-15 06:50:14 (19588): Guest Log: -rwxr-xr-x. 1 atlas atlas     8809 Mar 15 04:58 init_data.xml
2023-03-15 06:50:14 (19588): Guest Log: lrwxrwxrwx. 1 atlas atlas       20 Mar 15 04:58 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0
2023-03-15 06:50:14 (19588): Guest Log: -rw-r--r--. 1 atlas atlas     2544 Mar 15 04:58 pandaJob.out
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas      449 Mar 15 04:59 setup.sh.local
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas   965779 Mar 15 04:59 agis_schedconf.cvmfs.json
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas  1425877 Mar 15 05:00 cric_ddmendpoints.json
2023-03-15 06:50:14 (19588): Guest Log: drwx------. 4 atlas atlas      245 Mar 15 05:01 pilot3
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas 30045421 Mar 15 05:43 HITS.32413688._000229-69482-1678818617.pool.root.1
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas     1017 Mar 15 05:43 memory_monitor_summary.json
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas   218239 Mar 15 05:46 log.32413688._000229-69482-1678818617.job.log.tgz.1
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas     7673 Mar 15 05:49 heartbeat.json
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas     3018 Mar 15 05:50 pilotlog.txt
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas   156874 Mar 15 05:50 log.32413688._000229-69482-1678818617.job.log.1
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas      396 Mar 15 05:50 output.list
2023-03-15 06:50:14 (19588): Guest Log: -rw-r--r--. 1 atlas atlas      671 Mar 15 05:50 runtime_log
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas   389120 Mar 15 05:50 result.tar.gz
2023-03-15 06:50:14 (19588): Guest Log: -rw-r--r--. 1 atlas atlas    10789 Mar 15 05:50 runtime_log.err
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas      633 Mar 15 05:50 kXsKDmpaOw2n7Olcko1bjSoqABFKDmABFKDm7AsVDm3NGKDmuEZ1Oo.diag
2023-03-15 06:50:14 (19588): Guest Log: Looking for outputfile HITS.32413688._000229-69482-1678818617.pool.root.1
2023-03-15 06:50:14 (19588): Guest Log: HITS file was successfully produced
2023-03-15 06:50:14 (19588): Guest Log: -rw-------. 1 atlas atlas 30045421 Mar 15 05:43 /home/atlas/RunAtlas/HITS.32413688._000229-69482-1678818617.pool.root.1
2023-03-15 06:50:15 (19588): Guest Log: Successfully finished the ATLAS job!
2023-03-15 06:50:15 (19588): Guest Log: Copying the results back to the shared directory!
2023-03-15 06:50:15 (19588): Guest Log:  *** Contents of shared directory: ***
2023-03-15 06:50:15 (19588): Guest Log: total 456304
2023-03-15 06:50:15 (19588): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 15 04:57 ATLAS.root_0
2023-03-15 06:50:15 (19588): Guest Log: -rwxrwxrwx. 1 root root  30045421 Mar 15 05:43 HITS.pool.root.1
2023-03-15 06:50:15 (19588): Guest Log: -rwxrwxrwx. 1 root root      8809 Mar 15 04:57 init_data.xml
2023-03-15 06:50:15 (19588): Guest Log: -rwxrwxrwx. 1 root root    398334 Mar 15 04:06 input.tar.gz
2023-03-15 06:50:15 (19588): Guest Log: -rwxrwxrwx. 1 root root    389120 Mar 15  2023 result.tar.gz
2023-03-15 06:50:15 (19588): Guest Log: -rwxrwxrwx. 1 root root     17195 Mar 15 04:06 start_atlas.sh
2023-03-15 06:50:15 (19588): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-15 06:50:15 (19588): VM Completion File Detected.
2023-03-15 06:50:15 (19588): Powering off VM.
2023-03-15 06:50:18 (19588): Successfully stopped VM.
2023-03-15 06:50:18 (19588): Deregistering VM. (boinc_87fee7cf90252eea, slot#1)
2023-03-15 06:50:18 (19588): Removing network bandwidth throttle group from VM.
2023-03-15 06:50:18 (19588): Removing VM from VirtualBox.
06:50:23 (19588): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN