Name | RNALDm6wbw2n7Olcko1bjSoqABFKDmABFKDm7AsVDm9OGKDmvWf68m_1 |
Workunit | 2287470 |
Created | 15 Mar 2023, 13:57:55 UTC |
Sent | 15 Mar 2023, 15:11:11 UTC |
Report deadline | 22 Mar 2023, 15:11:11 UTC |
Received | 16 Mar 2023, 6:37:41 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1377 |
Run time | 5 hours 23 min 3 sec |
CPU time | 1 days 1 hours 19 min 42 sec |
Validate state | Valid |
Credit | 666.45 |
Device peak FLOPS | 14.85 GFLOPS |
Application version | ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas) windows_x86_64 |
Peak working set size | 82.95 MB |
Peak swap size | 115.16 MB |
Peak disk usage | 1.63 GB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 2023-03-16 02:12:35 (18024): Detected: vboxwrapper 26206 2023-03-16 02:12:35 (18024): Detected: BOINC client v7.20.2 2023-03-16 02:12:35 (18024): Detected: VirtualBox VboxManage Interface (Version: 6.1.40) 2023-03-16 02:12:36 (18024): Successfully copied 'init_data.xml' to the shared directory. 2023-03-16 02:12:36 (18024): Create VM. (boinc_d1010d804e2653d6, slot#1) 2023-03-16 02:12:37 (18024): Setting Memory Size for VM. (7500MB) 2023-03-16 02:12:37 (18024): Setting CPU Count for VM. (5) 2023-03-16 02:12:37 (18024): Setting Chipset Options for VM. 2023-03-16 02:12:38 (18024): Setting Graphics Controller Options for VM. 2023-03-16 02:12:38 (18024): Setting Boot Options for VM. 2023-03-16 02:12:38 (18024): Setting Network Configuration for NAT. 2023-03-16 02:12:38 (18024): Enabling VM Network Access. 2023-03-16 02:12:39 (18024): Disabling USB Support for VM. 2023-03-16 02:12:39 (18024): Disabling COM Port Support for VM. 2023-03-16 02:12:39 (18024): Disabling LPT Port Support for VM. 2023-03-16 02:12:39 (18024): Disabling Audio Support for VM. 2023-03-16 02:12:40 (18024): Disabling Clipboard Support for VM. 2023-03-16 02:12:40 (18024): Disabling Drag and Drop Support for VM. 2023-03-16 02:12:40 (18024): Adding storage controller(s) to VM. 2023-03-16 02:12:41 (18024): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi) 2023-03-16 02:12:41 (18024): Adding VirtualBox Guest Additions to VM. 2023-03-16 02:12:41 (18024): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB) 2023-03-16 02:12:42 (18024): forwarding host port 64160 to guest port 80 2023-03-16 02:12:42 (18024): Enabling remote desktop for VM. 2023-03-16 02:12:42 (18024): Enabling shared directory for VM. 2023-03-16 02:12:43 (18024): Starting VM using VBoxManage interface. (boinc_d1010d804e2653d6, slot#1) 2023-03-16 02:12:50 (18024): Successfully started VM. (PID = '504') 2023-03-16 02:12:50 (18024): Reporting VM Process ID to BOINC. 2023-03-16 02:12:50 (18024): Guest Log: BIOS: VirtualBox 6.1.40 2023-03-16 02:12:50 (18024): Guest Log: CPUID EDX: 0x178bfbff 2023-03-16 02:12:50 (18024): Guest Log: BIOS: No PCI IDE controller, not probing IDE 2023-03-16 02:12:50 (18024): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors 2023-03-16 02:12:50 (18024): VM state change detected. (old = 'poweredoff', new = 'running') 2023-03-16 02:12:50 (18024): Detected: Web Application Enabled (http://localhost:64160) 2023-03-16 02:12:50 (18024): Detected: Remote Desktop Enabled (localhost:64161) 2023-03-16 02:12:50 (18024): Preference change detected 2023-03-16 02:12:50 (18024): Setting CPU throttle for VM. (100%) 2023-03-16 02:12:50 (18024): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds)) 2023-03-16 02:12:52 (18024): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032 2023-03-16 02:12:52 (18024): Guest Log: BIOS: Booting from Hard Disk... 2023-03-16 02:12:55 (18024): Guest Log: BIOS: KBD: unsupported int 16h function 03 2023-03-16 02:12:55 (18024): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f 2023-03-16 02:12:55 (18024): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f 2023-03-16 02:13:07 (18024): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds 2023-03-16 02:13:07 (18024): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000) 2023-03-16 02:13:21 (18024): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log 2023-03-16 02:13:21 (18024): Guest Log: 00:00:00.000199 main Log opened 2023-03-16T02:13:19.779342000Z 2023-03-16 02:13:21 (18024): Guest Log: 00:00:00.000310 main OS Product: Linux 2023-03-16 02:13:21 (18024): Guest Log: 00:00:00.000345 main OS Release: 3.10.0-957.27.2.el7.x86_64 2023-03-16 02:13:21 (18024): Guest Log: 00:00:00.000385 main OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019 2023-03-16 02:13:21 (18024): Guest Log: 00:00:00.000422 main Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService 2023-03-16 02:13:21 (18024): Guest Log: 00:00:00.000423 main Process ID: 1412 2023-03-16 02:13:21 (18024): Guest Log: 00:00:00.000424 main Package type: LINUX_64BITS_GENERIC 2023-03-16 02:13:21 (18024): Guest Log: 00:00:00.001327 main 5.2.32 r132073 started. Verbose level = 0 2023-03-16 02:13:21 (18024): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... 2023-03-16 02:13:21 (18024): Guest Log: [INFO] Mounting shared directory 2023-03-16 02:13:21 (18024): Guest Log: [INFO] Checking for init_data.xml 2023-03-16 02:13:31 (18024): Guest Log: 00:00:10.006040 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 758 195 000ns (GuestNow=1 678 929 211 024 945 000 ns GuestLast=1 678 932 799 783 140 000 ns fSetTimeLastLoop=true ) 2023-03-16 02:13:48 (18024): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK 2023-03-16 02:13:48 (18024): Guest Log: [INFO] Detected branch: dev 2023-03-16 02:13:52 (18024): Guest Log: This is the dev version of the ATLAS job wrapper 2023-03-16 02:13:52 (18024): Guest Log: Copying input files 2023-03-16 02:13:55 (18024): Guest Log: Copied input files into RunAtlas. 2023-03-16 02:13:55 (18024): Guest Log: Detected user-configured HTTP proxy at http://10.116.178.201:3128 - will set in /etc/cvmfs/default.local 2023-03-16 02:14:05 (18024): Guest Log: Running cvmfs_config stat atlas.cern.ch 2023-03-16 02:14:06 (18024): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE 2023-03-16 02:14:06 (18024): Guest Log: 2.6.3.0 1695 0 29628 116789 4 1 3116421 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1 2023-03-16 02:14:08 (18024): Guest Log: copied the webapp to /var/www 2023-03-16 02:14:08 (18024): Guest Log: ATHENA_PROC_NUMBER=5 2023-03-16 02:14:08 (18024): Guest Log: ATHENA_CORE_NUMBER=5 2023-03-16 02:14:08 (18024): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 2023-03-16 02:14:08 (18024): Guest Log: *** Starting ATLAS job. (PandaID=5753961892 taskID=32413688) *** 2023-03-16 03:52:58 (18024): Status Report: Elapsed Time: '6000.000000' 2023-03-16 03:52:58 (18024): Status Report: CPU Time: '25199.843750' 2023-03-16 05:33:06 (18024): Status Report: Elapsed Time: '12000.000000' 2023-03-16 05:33:06 (18024): Status Report: CPU Time: '55198.890625' 2023-03-16 07:13:13 (18024): Status Report: Elapsed Time: '18000.000000' 2023-03-16 07:13:13 (18024): Status Report: CPU Time: '85212.156250' 2023-03-16 07:35:25 (18024): Guest Log: *** Job finished *** 2023-03-16 07:35:25 (18024): Guest Log: *** The last 20 lines of the pilot log: *** 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:07,819 | INFO | [job] job monitor thread has finished 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:08,058 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:08,059 | INFO | [job] queue monitor thread has finished 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:10,181 | INFO | [data] queue_monitor thread has finished 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,053 | INFO | job.realtimelogging is not enabled 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,054 | INFO | [payload] run_realtimelog thread has finished 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,064 | INFO | end of generic workflow (traces error code: 0) 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,064 | INFO | traces error code: 0 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,064 | INFO | pilot has finished 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,155 [wrapper] ==== pilot stdout END ==== 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,162 [wrapper] ==== wrapper stdout RESUME ==== 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,169 [wrapper] pilotpid: 5516 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,176 [wrapper] Pilot exit status: 0 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,759 [wrapper] pandaids: 5753961892 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,777 [wrapper] apfmon messages muted 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,784 [wrapper] Test setup, not cleaning 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,791 [wrapper] ==== wrapper stdout END ==== 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,797 [wrapper] ==== wrapper stderr END ==== 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,810 [wrapper] wrapperexiting ec=0, duration=19266 2023-03-16 07:35:25 (18024): Guest Log: 2023-03-16 06:35:16,818 [wrapper] apfmon messages muted 2023-03-16 07:35:25 (18024): Guest Log: *** Error codes and diagnostics *** 2023-03-16 07:35:25 (18024): Guest Log: "exeErrorCode": 0, 2023-03-16 07:35:25 (18024): Guest Log: "exeErrorDiag": "", 2023-03-16 07:35:25 (18024): Guest Log: "pilotErrorCode": 0, 2023-03-16 07:35:25 (18024): Guest Log: "pilotErrorDiag": "", 2023-03-16 07:35:25 (18024): Guest Log: *** Listing of results directory *** 2023-03-16 07:35:25 (18024): Guest Log: total 302172 2023-03-16 07:35:25 (18024): Guest Log: -rw-r--r--. 1 atlas atlas 386707 Mar 15 08:36 pilot3.tar.gz 2023-03-16 07:35:25 (18024): Guest Log: -rw-r--r--. 1 atlas atlas 4332 Mar 15 08:44 queuedata.json 2023-03-16 07:35:25 (18024): Guest Log: -rwx------. 1 atlas atlas 26447 Mar 15 08:46 runpilot2-wrapper.sh 2023-03-16 07:35:25 (18024): Guest Log: -rwxr-xr-x. 1 atlas atlas 8809 Mar 16 01:13 init_data.xml 2023-03-16 07:35:25 (18024): Guest Log: -rwxr-xr-x. 1 atlas atlas 398354 Mar 16 01:13 input.tar.gz 2023-03-16 07:35:25 (18024): Guest Log: -rwxr-xr-x. 1 atlas atlas 17279 Mar 16 01:13 start_atlas.sh 2023-03-16 07:35:25 (18024): Guest Log: lrwxrwxrwx. 1 atlas atlas 20 Mar 16 01:13 EVNT.29838250._000010.pool.root.1 -> /data/./ATLAS.root_0 2023-03-16 07:35:25 (18024): Guest Log: -rw-r--r--. 1 atlas atlas 2549 Mar 16 01:14 pandaJob.out 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 449 Mar 16 01:14 setup.sh.local 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 971545 Mar 16 01:14 agis_schedconf.cvmfs.json 2023-03-16 07:35:25 (18024): Guest Log: drwx------. 4 atlas atlas 245 Mar 16 01:14 pilot3 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 304113020 Mar 16 06:34 HITS.32413688._000229-102214-1678869971.pool.root.1 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 1026 Mar 16 06:34 memory_monitor_summary.json 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 1425877 Mar 16 06:34 agis_ddmendpoints.agis.ALL.json 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 335447 Mar 16 06:34 log.32413688._000229-102214-1678869971.job.log.tgz.1 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 7696 Mar 16 06:35 heartbeat.json 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 2926 Mar 16 06:35 pilotlog.txt 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 649773 Mar 16 06:35 log.32413688._000229-102214-1678869971.job.log.1 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 399 Mar 16 06:35 output.list 2023-03-16 07:35:25 (18024): Guest Log: -rw-r--r--. 1 atlas atlas 674 Mar 16 06:35 runtime_log 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 1003520 Mar 16 06:35 result.tar.gz 2023-03-16 07:35:25 (18024): Guest Log: -rw-r--r--. 1 atlas atlas 10972 Mar 16 06:35 runtime_log.err 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 641 Mar 16 06:35 RNALDm6wbw2n7Olcko1bjSoqABFKDmABFKDm7AsVDm9OGKDmvWf68m.diag 2023-03-16 07:35:25 (18024): Guest Log: Looking for outputfile HITS.32413688._000229-102214-1678869971.pool.root.1 2023-03-16 07:35:25 (18024): Guest Log: HITS file was successfully produced 2023-03-16 07:35:25 (18024): Guest Log: -rw-------. 1 atlas atlas 304113020 Mar 16 06:34 /home/atlas/RunAtlas/HITS.32413688._000229-102214-1678869971.pool.root.1 2023-03-16 07:35:27 (18024): Guest Log: Successfully finished the ATLAS job! 2023-03-16 07:35:27 (18024): Guest Log: Copying the results back to the shared directory! 2023-03-16 07:35:27 (18024): Guest Log: *** Contents of shared directory: *** 2023-03-16 07:35:27 (18024): Guest Log: total 724548 2023-03-16 07:35:27 (18024): Guest Log: -rwxrwxrwx. 1 root root 436382292 Mar 16 01:12 ATLAS.root_0 2023-03-16 07:35:27 (18024): Guest Log: -rwxrwxrwx. 1 root root 304113020 Mar 16 06:34 HITS.pool.root.1 2023-03-16 07:35:27 (18024): Guest Log: -rwxrwxrwx. 1 root root 8809 Mar 16 01:12 init_data.xml 2023-03-16 07:35:27 (18024): Guest Log: -rwxrwxrwx. 1 root root 398354 Mar 15 15:11 input.tar.gz 2023-03-16 07:35:27 (18024): Guest Log: -rwxrwxrwx. 1 root root 1003520 Mar 16 2023 result.tar.gz 2023-03-16 07:35:27 (18024): Guest Log: -rwxrwxrwx. 1 root root 17279 Mar 15 15:11 start_atlas.sh 2023-03-16 07:35:27 (18024): Guest Log: *** Success! Shutting down the machine. *** 2023-03-16 07:35:27 (18024): VM Completion File Detected. 2023-03-16 07:35:27 (18024): Powering off VM. 2023-03-16 07:35:30 (18024): Successfully stopped VM. 2023-03-16 07:35:30 (18024): Deregistering VM. (boinc_d1010d804e2653d6, slot#1) 2023-03-16 07:35:30 (18024): Removing network bandwidth throttle group from VM. 2023-03-16 07:35:30 (18024): Removing VM from VirtualBox. 07:35:35 (18024): called boinc_finish(0) </stderr_txt> ]]>
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