Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-16 17:23:11 (8272): Detected: vboxwrapper 26206
2023-03-16 17:23:11 (8272): Detected: BOINC client v7.16.20
2023-03-16 17:23:12 (8272): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2023-03-16 17:23:13 (8272): Successfully copied 'init_data.xml' to the shared directory.
2023-03-16 17:23:13 (8272): Create VM. (boinc_b8133f6a50a592b3, slot#3)
2023-03-16 17:23:14 (8272): Setting Memory Size for VM. (2241MB)
2023-03-16 17:23:14 (8272): Setting CPU Count for VM. (6)
2023-03-16 17:23:14 (8272): Setting Chipset Options for VM.
2023-03-16 17:23:14 (8272): Setting Graphics Controller Options for VM.
2023-03-16 17:23:15 (8272): Setting Boot Options for VM.
2023-03-16 17:23:15 (8272): Setting Network Configuration for NAT.
2023-03-16 17:23:15 (8272): Enabling VM Network Access.
2023-03-16 17:23:16 (8272): Disabling USB Support for VM.
2023-03-16 17:23:16 (8272): Disabling COM Port Support for VM.
2023-03-16 17:23:16 (8272): Disabling LPT Port Support for VM.
2023-03-16 17:23:16 (8272): Disabling Audio Support for VM.
2023-03-16 17:23:17 (8272): Disabling Clipboard Support for VM.
2023-03-16 17:23:17 (8272): Disabling Drag and Drop Support for VM.
2023-03-16 17:23:17 (8272): Adding storage controller(s) to VM.
2023-03-16 17:23:17 (8272): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-16 17:23:19 (8272): Adding VirtualBox Guest Additions to VM.
2023-03-16 17:23:19 (8272): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-16 17:23:19 (8272): forwarding host port 51552 to guest port 80
2023-03-16 17:23:19 (8272): Enabling remote desktop for VM.
2023-03-16 17:23:20 (8272): Required extension pack not installed, remote desktop not enabled.
2023-03-16 17:23:20 (8272): Enabling shared directory for VM.
2023-03-16 17:23:20 (8272): Starting VM using VBoxManage interface. (boinc_b8133f6a50a592b3, slot#3)
2023-03-16 17:23:25 (8272): Successfully started VM. (PID = '2020')
2023-03-16 17:23:25 (8272): Reporting VM Process ID to BOINC.
2023-03-16 17:23:25 (8272): Guest Log: BIOS: VirtualBox 6.1.12
2023-03-16 17:23:25 (8272): Guest Log: CPUID EDX: 0x178bfbff
2023-03-16 17:23:25 (8272): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-16 17:23:25 (8272): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-16 17:23:25 (8272): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-16 17:23:25 (8272): Detected: Web Application Enabled (http://localhost:51552)
2023-03-16 17:23:25 (8272): Preference change detected
2023-03-16 17:23:25 (8272): Setting CPU throttle for VM. (100%)
2023-03-16 17:23:25 (8272): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-16 17:23:27 (8272): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-16 17:23:27 (8272): Guest Log: BIOS: Booting from Hard Disk...
2023-03-16 17:23:30 (8272): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-16 17:23:30 (8272): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-16 17:23:30 (8272): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-16 17:23:38 (8272): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-16 17:23:38 (8272): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-16 17:23:46 (8272): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-16 17:23:46 (8272): Guest Log: 00:00:00.000190 main     Log opened 2023-03-16T17:23:44.170323000Z
2023-03-16 17:23:46 (8272): Guest Log: 00:00:00.000302 main     OS Product: Linux
2023-03-16 17:23:46 (8272): Guest Log: 00:00:00.000340 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-16 17:23:46 (8272): Guest Log: 00:00:00.000371 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-16 17:23:46 (8272): Guest Log: 00:00:00.000402 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-16 17:23:46 (8272): Guest Log: 00:00:00.000403 main     Process ID: 1263
2023-03-16 17:23:46 (8272): Guest Log: 00:00:00.000403 main     Package type: LINUX_64BITS_GENERIC
2023-03-16 17:23:46 (8272): Guest Log: 00:00:00.001816 main     5.2.32 r132073 started. Verbose level = 0
2023-03-16 17:23:46 (8272): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-16 17:23:46 (8272): Guest Log: [INFO] Mounting shared directory
2023-03-16 17:23:46 (8272): Guest Log: [INFO] Checking for init_data.xml
2023-03-16 17:23:51 (8272): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-16 17:23:51 (8272): Guest Log: [INFO] Detected branch: dev
2023-03-16 17:23:51 (8272): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-16 17:23:51 (8272): Guest Log: Copying input files
2023-03-16 17:23:56 (8272): Guest Log: 00:00:10.003627 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 741 116 000ns (GuestNow=1 678 983 835 432 291 000 ns GuestLast=1 678 987 424 173 407 000 ns fSetTimeLastLoop=true )
2023-03-16 17:23:56 (8272): Guest Log: Copied input files into RunAtlas.
2023-03-16 17:23:56 (8272): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-16 17:23:56 (8272): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-16 17:23:56 (8272): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-16 17:23:56 (8272): Guest Log: Further information can be found at the LHC@home message board.
2023-03-16 17:24:05 (8272): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-16 17:24:05 (8272): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-16 17:24:05 (8272): Guest Log: 2.6.3.0 1538 0 30168 116822 4 1 3116422 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-03-16 17:24:06 (8272): Guest Log: copied the webapp to /var/www
2023-03-16 17:24:06 (8272): Guest Log: ATHENA_PROC_NUMBER=6
2023-03-16 17:24:06 (8272): Guest Log: ATHENA_CORE_NUMBER=6
2023-03-16 17:24:06 (8272): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-16 17:24:06 (8272): Guest Log:  *** Starting ATLAS job. (PandaID=5785059001 taskID=32777692) ***
2023-03-16 17:30:35 (8272): VM state change detected. (old = 'running', new = 'paused')
2023-03-17 09:54:45 (8272): VM state change detected. (old = 'paused', new = 'running')
2023-03-17 09:54:46 (8272): Guest Log: 00:06:50.587497 timesync vgsvcTimeSyncWorker: Radical host time change: 59 060 059 000 000ns (HostNow=1 679 043 286 095 000 000 ns HostLast=1 678 984 226 036 000 000 ns)
2023-03-17 09:54:56 (8272): Guest Log: 00:07:00.596152 timesync vgsvcTimeSyncWorker: Radical guest time change: 59 060 093 278 000ns (GuestNow=1 679 043 296 106 381 000 ns GuestLast=1 678 984 236 013 103 000 ns fSetTimeLastLoop=true )
2023-03-17 10:09:51 (8272): VM state change detected. (old = 'running', new = 'paused')
2023-03-17 12:31:30 (8272): VM state change detected. (old = 'paused', new = 'running')
2023-03-17 12:31:34 (8272): Guest Log: 00:22:01.291416 timesync vgsvcTimeSyncWorker: Radical host time change: 8 509 236 000 000ns (HostNow=1 679 052 694 179 000 000 ns HostLast=1 679 044 184 943 000 000 ns)
2023-03-17 12:31:44 (8272): Guest Log: 00:22:11.292840 timesync vgsvcTimeSyncWorker: Radical guest time change: 8 507 379 724 000ns (GuestNow=1 679 052 704 180 904 000 ns GuestLast=1 679 044 196 801 180 000 ns fSetTimeLastLoop=true )
2023-03-17 12:38:29 (8272): Guest Log:  *** Job finished ***
2023-03-17 12:38:29 (8272): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:25,084 | INFO     | [data] queue_monitor thread has finished
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:26,350 | INFO     | starting RealTimeLogger.sending_logs
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:26,350 | INFO     | added log files: ['/home/atlas/RunAtlas/PanDA_Pilot-5785059001/payload.stdout']
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:26,350 | INFO     | [payload] run_realtimelog thread has finished
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:27,394 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:27,395 | INFO     | [job] job monitor thread has finished
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,306 | INFO     | end of generic workflow (traces error code: 0)
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,306 | INFO     | traces error code: 0
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,307 | INFO     | pilot has finished
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,406 [wrapper] ==== pilot stdout END ====
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,411 [wrapper] ==== wrapper stdout RESUME ====
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,416 [wrapper] pilotpid: 5369
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,422 [wrapper] Pilot exit status: 0
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,487 [wrapper] pandaids: 5785059001
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,499 [wrapper] apfmon messages muted
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,505 [wrapper] Test setup, not cleaning
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,511 [wrapper] ==== wrapper stdout END ====
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,516 [wrapper] ==== wrapper stderr END ====
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,528 [wrapper] wrapperexiting ec=0, duration=69261
2023-03-17 12:38:29 (8272): Guest Log: 2023-03-17 11:38:28,533 [wrapper] apfmon messages muted
2023-03-17 12:38:29 (8272): Guest Log:  *** Error codes and diagnostics ***
2023-03-17 12:38:29 (8272): Guest Log:     "exeErrorCode": 0,
2023-03-17 12:38:29 (8272): Guest Log:     "exeErrorDiag": "",
2023-03-17 12:38:29 (8272): Guest Log:     "pilotErrorCode": 1150,
2023-03-17 12:38:29 (8272): Guest Log:     "pilotErrorDiag": "Looping job killed by pilot",
2023-03-17 12:38:29 (8272): Guest Log:  *** Listing of results directory ***
2023-03-17 12:38:29 (8272): Guest Log: total 4664
2023-03-17 12:38:29 (8272): Guest Log: -rw-r--r--. 1 atlas atlas  386707 Mar 16 02:23 pilot3.tar.gz
2023-03-17 12:38:29 (8272): Guest Log: -rw-r--r--. 1 atlas atlas    4336 Mar 16 03:05 queuedata.json
2023-03-17 12:38:29 (8272): Guest Log: -rwx------. 1 atlas atlas   26447 Mar 16 03:09 runpilot2-wrapper.sh
2023-03-17 12:38:29 (8272): Guest Log: -rwxr-xr-x. 1 atlas atlas   17076 Mar 16 16:23 start_atlas.sh
2023-03-17 12:38:29 (8272): Guest Log: -rwxr-xr-x. 1 atlas atlas  398327 Mar 16 16:23 input.tar.gz
2023-03-17 12:38:29 (8272): Guest Log: -rwxr-xr-x. 1 atlas atlas    8898 Mar 16 16:23 init_data.xml
2023-03-17 12:38:29 (8272): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 16 16:23 EVNT.29838250._000006.pool.root.1 -> /data/./ATLAS.root_0
2023-03-17 12:38:29 (8272): Guest Log: -rw-r--r--. 1 atlas atlas    2465 Mar 16 16:24 pandaJob.out
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas     412 Mar 16 16:24 setup.sh.local
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas 1425933 Mar 16 16:25 cric_ddmendpoints.json
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas  973408 Mar 16 16:25 agis_schedconf.cvmfs.json
2023-03-17 12:38:29 (8272): Guest Log: drwx------. 4 atlas atlas     245 Mar 16 16:26 pilot3
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas  857592 Mar 17 11:32 core.7903
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas    1011 Mar 17 11:32 memory_monitor_summary.json
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas  171031 Mar 17 11:32 log.32777692._000103.job.log.tgz.1
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas    2585 Mar 17 11:38 heartbeat.json
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas    3398 Mar 17 11:38 pilotlog.txt
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas  123549 Mar 17 11:38 log.32777692._000103.job.log.1
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas     182 Mar 17 11:38 output.list
2023-03-17 12:38:29 (8272): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar 17 11:38 runtime_log
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas  307200 Mar 17 11:38 result.tar.gz
2023-03-17 12:38:29 (8272): Guest Log: -rw-r--r--. 1 atlas atlas    9831 Mar 17 11:38 runtime_log.err
2023-03-17 12:38:29 (8272): Guest Log: -rw-------. 1 atlas atlas     639 Mar 17 11:38 2XaLDmLAtw2n7Olcko1bjSoqABFKDmABFKDm7AsVDmcRGKDm0kefJm.diag
2023-03-17 12:38:29 (8272): Guest Log: Looking for outputfile HITS.32777692._000103.pool.root.1
2023-03-17 12:38:29 (8272): Guest Log: No HITS file was produced
2023-03-17 12:38:29 (8272): Guest Log: Successfully finished the ATLAS job!
2023-03-17 12:38:29 (8272): Guest Log: Copying the results back to the shared directory!
2023-03-17 12:38:29 (8272): Guest Log:  *** Contents of shared directory: ***
2023-03-17 12:38:29 (8272): Guest Log: total 429164
2023-03-17 12:38:29 (8272): Guest Log: -rwxrwxrwx. 1 root root 438720602 Mar 16 16:23 ATLAS.root_0
2023-03-17 12:38:29 (8272): Guest Log: -rwxrwxrwx. 1 root root      8898 Mar 16 16:23 init_data.xml
2023-03-17 12:38:29 (8272): Guest Log: -rwxrwxrwx. 1 root root    398327 Mar 16 16:21 input.tar.gz
2023-03-17 12:38:29 (8272): Guest Log: -rwxrwxrwx. 1 root root    307200 Mar 17 11:38 result.tar.gz
2023-03-17 12:38:29 (8272): Guest Log: -rwxrwxrwx. 1 root root     17076 Mar 16 16:21 start_atlas.sh
2023-03-17 12:38:29 (8272): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-17 12:38:29 (8272): VM Completion File Detected.
2023-03-17 12:38:29 (8272): Powering off VM.
2023-03-17 12:38:30 (8272): Successfully stopped VM.
2023-03-17 12:38:30 (8272): Deregistering VM. (boinc_b8133f6a50a592b3, slot#3)
2023-03-17 12:38:30 (8272): Removing network bandwidth throttle group from VM.
2023-03-17 12:38:30 (8272): Removing VM from VirtualBox.
12:38:36 (8272): called boinc_finish(0)

</stderr_txt>
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