Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-17 10:49:43 (6364): Detected: vboxwrapper 26206
2023-03-17 10:49:43 (6364): Detected: BOINC client v7.20.2
2023-03-17 10:49:44 (6364): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2023-03-17 10:49:44 (6364): Successfully copied 'init_data.xml' to the shared directory.
2023-03-17 10:49:45 (6364): Create VM. (boinc_7d1d3c06c8e258df, slot#1)
2023-03-17 10:49:45 (6364): Setting Memory Size for VM. (2241MB)
2023-03-17 10:49:46 (6364): Setting CPU Count for VM. (5)
2023-03-17 10:49:46 (6364): Setting Chipset Options for VM.
2023-03-17 10:49:46 (6364): Setting Graphics Controller Options for VM.
2023-03-17 10:49:46 (6364): Setting Boot Options for VM.
2023-03-17 10:49:47 (6364): Setting Network Configuration for NAT.
2023-03-17 10:49:47 (6364): Enabling VM Network Access.
2023-03-17 10:49:47 (6364): Disabling USB Support for VM.
2023-03-17 10:49:48 (6364): Disabling COM Port Support for VM.
2023-03-17 10:49:48 (6364): Disabling LPT Port Support for VM.
2023-03-17 10:49:48 (6364): Disabling Audio Support for VM.
2023-03-17 10:49:48 (6364): Disabling Clipboard Support for VM.
2023-03-17 10:49:49 (6364): Disabling Drag and Drop Support for VM.
2023-03-17 10:49:49 (6364): Adding storage controller(s) to VM.
2023-03-17 10:49:49 (6364): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-17 10:49:50 (6364): Adding VirtualBox Guest Additions to VM.
2023-03-17 10:49:50 (6364): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-17 10:49:50 (6364): forwarding host port 56860 to guest port 80
2023-03-17 10:49:51 (6364): Enabling remote desktop for VM.
2023-03-17 10:49:51 (6364): Enabling shared directory for VM.
2023-03-17 10:49:52 (6364): Starting VM using VBoxManage interface. (boinc_7d1d3c06c8e258df, slot#1)
2023-03-17 10:49:58 (6364): Successfully started VM. (PID = '9888')
2023-03-17 10:49:58 (6364): Reporting VM Process ID to BOINC.
2023-03-17 10:49:58 (6364): Guest Log: BIOS: VirtualBox 6.1.40
2023-03-17 10:49:58 (6364): Guest Log: CPUID EDX: 0x178bfbff
2023-03-17 10:49:58 (6364): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-17 10:49:58 (6364): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-17 10:49:58 (6364): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-17 10:49:58 (6364): Detected: Web Application Enabled (http://localhost:56860)
2023-03-17 10:49:58 (6364): Detected: Remote Desktop Enabled (localhost:56861)
2023-03-17 10:49:58 (6364): Preference change detected
2023-03-17 10:49:58 (6364): Setting CPU throttle for VM. (100%)
2023-03-17 10:49:59 (6364): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-17 10:50:00 (6364): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-17 10:50:00 (6364): Guest Log: BIOS: Booting from Hard Disk...
2023-03-17 10:50:03 (6364): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-17 10:50:03 (6364): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-17 10:50:03 (6364): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-17 10:50:13 (6364): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-17 10:50:13 (6364): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-17 10:50:25 (6364): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-17 10:50:25 (6364): Guest Log: 00:00:00.000166 main     Log opened 2023-03-17T10:50:24.164567000Z
2023-03-17 10:50:25 (6364): Guest Log: 00:00:00.000259 main     OS Product: Linux
2023-03-17 10:50:25 (6364): Guest Log: 00:00:00.000288 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-17 10:50:25 (6364): Guest Log: 00:00:00.000314 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-17 10:50:25 (6364): Guest Log: 00:00:00.000341 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-17 10:50:25 (6364): Guest Log: 00:00:00.000341 main     Process ID: 1249
2023-03-17 10:50:25 (6364): Guest Log: 00:00:00.000342 main     Package type: LINUX_64BITS_GENERIC
2023-03-17 10:50:25 (6364): Guest Log: 00:00:00.001484 main     5.2.32 r132073 started. Verbose level = 0
2023-03-17 10:50:26 (6364): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-17 10:50:26 (6364): Guest Log: [INFO] Mounting shared directory
2023-03-17 10:50:26 (6364): Guest Log: [INFO] Checking for init_data.xml
2023-03-17 10:50:35 (6364): Guest Log: 00:00:10.010808 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 427 593 000ns (GuestNow=1 679 046 635 740 263 000 ns GuestLast=1 679 050 224 167 856 000 ns fSetTimeLastLoop=true )
2023-03-17 10:51:23 (6364): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-17 10:51:23 (6364): Guest Log: [INFO] Detected branch: dev
2023-03-17 10:52:14 (6364): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-17 10:52:14 (6364): Guest Log: Copying input files
2023-03-17 10:52:19 (6364): Guest Log: Copied input files into RunAtlas.
2023-03-17 10:52:19 (6364): Guest Log: Detected user-configured HTTP proxy at http://10.116.178.201:3128 - will set in /etc/cvmfs/default.local
2023-03-17 10:52:27 (6364): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-17 10:52:27 (6364): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-17 10:52:27 (6364): Guest Log: 2.6.3.0 1548 1 29556 116847 4 1 3116422 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
2023-03-17 10:52:29 (6364): Guest Log: copied the webapp to /var/www
2023-03-17 10:52:29 (6364): Guest Log: ATHENA_PROC_NUMBER=5
2023-03-17 10:52:29 (6364): Guest Log: ATHENA_CORE_NUMBER=5
2023-03-17 10:52:29 (6364): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-17 10:52:29 (6364): Guest Log:  *** Starting ATLAS job. (PandaID=5785046652 taskID=32777692) ***
2023-03-17 12:30:05 (6364): Status Report: Elapsed Time: '6000.000000'
2023-03-17 12:30:05 (6364): Status Report: CPU Time: '18589.593750'
2023-03-17 14:10:12 (6364): Status Report: Elapsed Time: '12000.000000'
2023-03-17 14:10:12 (6364): Status Report: CPU Time: '48583.453125'
2023-03-17 15:50:19 (6364): Status Report: Elapsed Time: '18000.000000'
2023-03-17 15:50:19 (6364): Status Report: CPU Time: '78593.656250'
2023-03-17 16:46:56 (6364): Guest Log:  *** Job finished ***
2023-03-17 16:46:56 (6364): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:33,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:36,390 | INFO     | [data] queue_monitor thread has finished
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:40,830 | INFO     | job.realtimelogging is not enabled
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:40,830 | INFO     | [payload] run_realtimelog thread has finished
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,095 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,096 | INFO     | [job] job monitor thread has finished
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,115 | INFO     | end of generic workflow (traces error code: 0)
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,193 | INFO     | traces error code: 0
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,193 | INFO     | pilot has finished
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,549 [wrapper] ==== pilot stdout END ====
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,561 [wrapper] ==== wrapper stdout RESUME ====
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,567 [wrapper] pilotpid: 5382
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,574 [wrapper] Pilot exit status: 0
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,814 [wrapper] pandaids: 5785046652
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,828 [wrapper] apfmon messages muted
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,834 [wrapper] Test setup, not cleaning
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,846 [wrapper] ==== wrapper stdout END ====
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,853 [wrapper] ==== wrapper stderr END ====
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,866 [wrapper] wrapperexiting ec=0, duration=21252
2023-03-17 16:46:57 (6364): Guest Log: 2023-03-17 15:46:46,872 [wrapper] apfmon messages muted
2023-03-17 16:46:57 (6364): Guest Log:  *** Error codes and diagnostics ***
2023-03-17 16:46:57 (6364): Guest Log:     "exeErrorCode": 0,
2023-03-17 16:46:57 (6364): Guest Log:     "exeErrorDiag": "",
2023-03-17 16:46:57 (6364): Guest Log:     "pilotErrorCode": 0,
2023-03-17 16:46:57 (6364): Guest Log:     "pilotErrorDiag": "",
2023-03-17 16:46:57 (6364): Guest Log:  *** Listing of results directory ***
2023-03-17 16:46:57 (6364): Guest Log: total 306452
2023-03-17 16:46:57 (6364): Guest Log: -rw-r--r--. 1 atlas atlas    386707 Mar 16 02:23 pilot3.tar.gz
2023-03-17 16:46:57 (6364): Guest Log: -rw-r--r--. 1 atlas atlas      4336 Mar 16 02:37 queuedata.json
2023-03-17 16:46:57 (6364): Guest Log: -rwx------. 1 atlas atlas     26447 Mar 16 02:37 runpilot2-wrapper.sh
2023-03-17 16:46:57 (6364): Guest Log: -rwxr-xr-x. 1 atlas atlas      8809 Mar 17 09:52 init_data.xml
2023-03-17 16:46:57 (6364): Guest Log: -rwxr-xr-x. 1 atlas atlas    398317 Mar 17 09:52 input.tar.gz
2023-03-17 16:46:57 (6364): Guest Log: -rwxr-xr-x. 1 atlas atlas     17076 Mar 17 09:52 start_atlas.sh
2023-03-17 16:46:57 (6364): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 17 09:52 EVNT.29838250._000001.pool.root.1 -> /data/./ATLAS.root_0
2023-03-17 16:46:57 (6364): Guest Log: -rw-r--r--. 1 atlas atlas      2462 Mar 17 09:52 pandaJob.out
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas       449 Mar 17 09:52 setup.sh.local
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas   1424989 Mar 17 09:54 cric_ddmendpoints.json
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas    975634 Mar 17 09:54 agis_schedconf.cvmfs.json
2023-03-17 16:46:57 (6364): Guest Log: drwx------. 4 atlas atlas       245 Mar 17 09:55 pilot3
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas 308310733 Mar 17 15:36 HITS.32777692._000020.pool.root.1
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas      1035 Mar 17 15:40 memory_monitor_summary.json
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas    350841 Mar 17 15:43 log.32777692._000020.job.log.tgz.1
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas      7615 Mar 17 15:46 heartbeat.json
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas      3018 Mar 17 15:46 pilotlog.txt
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas    721744 Mar 17 15:46 log.32777692._000020.job.log.1
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas       345 Mar 17 15:46 output.list
2023-03-17 16:46:57 (6364): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 17 15:46 runtime_log
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas   1095680 Mar 17 15:46 result.tar.gz
2023-03-17 16:46:57 (6364): Guest Log: -rw-r--r--. 1 atlas atlas     10239 Mar 17 15:46 runtime_log.err
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas       642 Mar 17 15:46 296NDmxfsw2n7Olcko1bjSoqABFKDmABFKDm7AsVDmAQGKDmuUyU8n.diag
2023-03-17 16:46:57 (6364): Guest Log: Looking for outputfile HITS.32777692._000020.pool.root.1
2023-03-17 16:46:57 (6364): Guest Log: HITS file was successfully produced
2023-03-17 16:46:57 (6364): Guest Log: -rw-------. 1 atlas atlas 308310733 Mar 17 15:36 /home/atlas/RunAtlas/HITS.32777692._000020.pool.root.1
2023-03-17 16:46:59 (6364): Guest Log: Successfully finished the ATLAS job!
2023-03-17 16:46:59 (6364): Guest Log: Copying the results back to the shared directory!
2023-03-17 16:46:59 (6364): Guest Log:  *** Contents of shared directory: ***
2023-03-17 16:46:59 (6364): Guest Log: total 729520
2023-03-17 16:46:59 (6364): Guest Log: -rwxrwxrwx. 1 root root 437179245 Mar 17 09:49 ATLAS.root_0
2023-03-17 16:46:59 (6364): Guest Log: -rwxrwxrwx. 1 root root 308310733 Mar 17 15:36 HITS.pool.root.1
2023-03-17 16:46:59 (6364): Guest Log: -rwxrwxrwx. 1 root root      8809 Mar 17 09:49 init_data.xml
2023-03-17 16:46:59 (6364): Guest Log: -rwxrwxrwx. 1 root root    398317 Mar 16 20:03 input.tar.gz
2023-03-17 16:46:59 (6364): Guest Log: -rwxrwxrwx. 1 root root   1095680 Mar 17  2023 result.tar.gz
2023-03-17 16:46:59 (6364): Guest Log: -rwxrwxrwx. 1 root root     17076 Mar 16 20:03 start_atlas.sh
2023-03-17 16:46:59 (6364): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-17 16:46:59 (6364): VM Completion File Detected.
2023-03-17 16:46:59 (6364): Powering off VM.
2023-03-17 16:47:01 (6364): Successfully stopped VM.
2023-03-17 16:47:01 (6364): Deregistering VM. (boinc_7d1d3c06c8e258df, slot#1)
2023-03-17 16:47:01 (6364): Removing network bandwidth throttle group from VM.
2023-03-17 16:47:01 (6364): Removing VM from VirtualBox.
16:47:06 (6364): called boinc_finish(0)

</stderr_txt>
]]>

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