Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-18 05:26:22 (3892): Detected: vboxwrapper 26206
2023-03-18 05:26:22 (3892): Detected: BOINC client v7.20.2
2023-03-18 05:26:23 (3892): Detected: VirtualBox VboxManage Interface (Version: 6.1.40)
2023-03-18 05:26:23 (3892): Successfully copied 'init_data.xml' to the shared directory.
2023-03-18 05:26:23 (3892): Create VM. (boinc_aa5e64a038564c18, slot#1)
2023-03-18 05:26:24 (3892): Setting Memory Size for VM. (2241MB)
2023-03-18 05:26:24 (3892): Setting CPU Count for VM. (5)
2023-03-18 05:26:24 (3892): Setting Chipset Options for VM.
2023-03-18 05:26:25 (3892): Setting Graphics Controller Options for VM.
2023-03-18 05:26:25 (3892): Setting Boot Options for VM.
2023-03-18 05:26:25 (3892): Setting Network Configuration for NAT.
2023-03-18 05:26:25 (3892): Enabling VM Network Access.
2023-03-18 05:26:26 (3892): Disabling USB Support for VM.
2023-03-18 05:26:26 (3892): Disabling COM Port Support for VM.
2023-03-18 05:26:26 (3892): Disabling LPT Port Support for VM.
2023-03-18 05:26:26 (3892): Disabling Audio Support for VM.
2023-03-18 05:26:27 (3892): Disabling Clipboard Support for VM.
2023-03-18 05:26:27 (3892): Disabling Drag and Drop Support for VM.
2023-03-18 05:26:27 (3892): Adding storage controller(s) to VM.
2023-03-18 05:26:28 (3892): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-18 05:26:28 (3892): Adding VirtualBox Guest Additions to VM.
2023-03-18 05:26:28 (3892): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-18 05:26:29 (3892): forwarding host port 62243 to guest port 80
2023-03-18 05:26:29 (3892): Enabling remote desktop for VM.
2023-03-18 05:26:29 (3892): Enabling shared directory for VM.
2023-03-18 05:26:30 (3892): Starting VM using VBoxManage interface. (boinc_aa5e64a038564c18, slot#1)
2023-03-18 05:26:37 (3892): Successfully started VM. (PID = '3500')
2023-03-18 05:26:37 (3892): Reporting VM Process ID to BOINC.
2023-03-18 05:26:37 (3892): Guest Log: BIOS: VirtualBox 6.1.40
2023-03-18 05:26:37 (3892): Guest Log: CPUID EDX: 0x178bfbff
2023-03-18 05:26:37 (3892): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-03-18 05:26:37 (3892): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-18 05:26:37 (3892): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-18 05:26:37 (3892): Detected: Web Application Enabled (http://localhost:62243)
2023-03-18 05:26:37 (3892): Detected: Remote Desktop Enabled (localhost:62244)
2023-03-18 05:26:37 (3892): Preference change detected
2023-03-18 05:26:37 (3892): Setting CPU throttle for VM. (100%)
2023-03-18 05:26:37 (3892): Setting checkpoint interval to 1200 seconds. (Higher value of (Preference: 1200 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-18 05:26:39 (3892): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-18 05:26:39 (3892): Guest Log: BIOS: Booting from Hard Disk...
2023-03-18 05:26:42 (3892): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-18 05:26:42 (3892): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-18 05:26:42 (3892): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-18 05:26:51 (3892): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-18 05:26:51 (3892): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-18 05:27:04 (3892): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-18 05:27:04 (3892): Guest Log: 00:00:00.000198 main     Log opened 2023-03-18T05:27:02.359592000Z
2023-03-18 05:27:04 (3892): Guest Log: 00:00:00.000315 main     OS Product: Linux
2023-03-18 05:27:04 (3892): Guest Log: 00:00:00.000354 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-18 05:27:04 (3892): Guest Log: 00:00:00.000386 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-18 05:27:04 (3892): Guest Log: 00:00:00.000418 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-18 05:27:04 (3892): Guest Log: 00:00:00.000419 main     Process ID: 1260
2023-03-18 05:27:04 (3892): Guest Log: 00:00:00.000420 main     Package type: LINUX_64BITS_GENERIC
2023-03-18 05:27:04 (3892): Guest Log: 00:00:00.001942 main     5.2.32 r132073 started. Verbose level = 0
2023-03-18 05:27:04 (3892): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-18 05:27:04 (3892): Guest Log: [INFO] Mounting shared directory
2023-03-18 05:27:04 (3892): Guest Log: [INFO] Checking for init_data.xml
2023-03-18 05:27:14 (3892): Guest Log: 00:00:10.010964 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 001 061 000ns (GuestNow=1 679 113 633 362 126 000 ns GuestLast=1 679 117 222 363 187 000 ns fSetTimeLastLoop=true )
2023-03-18 05:28:24 (3892): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-18 05:28:24 (3892): Guest Log: [INFO] Detected branch: dev
2023-03-18 05:28:24 (3892): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-18 05:28:24 (3892): Guest Log: Copying input files
2023-03-18 05:28:28 (3892): Guest Log: Copied input files into RunAtlas.
2023-03-18 05:28:28 (3892): Guest Log: Detected user-configured HTTP proxy at http://10.116.178.201:3128 - will set in /etc/cvmfs/default.local
2023-03-18 05:28:46 (3892): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-18 05:28:47 (3892): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-18 05:28:47 (3892): Guest Log: 2.6.3.0 1575 1 29656 116880 3 1 3116360 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
2023-03-18 05:28:48 (3892): Guest Log: copied the webapp to /var/www
2023-03-18 05:28:48 (3892): Guest Log: ATHENA_PROC_NUMBER=5
2023-03-18 05:28:48 (3892): Guest Log: ATHENA_CORE_NUMBER=5
2023-03-18 05:28:48 (3892): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-18 05:28:48 (3892): Guest Log:  *** Starting ATLAS job. (PandaID=5785277708 taskID=32777692) ***
2023-03-18 07:06:47 (3892): Status Report: Elapsed Time: '6000.414114'
2023-03-18 07:06:47 (3892): Status Report: CPU Time: '17924.031250'
2023-03-18 08:47:01 (3892): Status Report: Elapsed Time: '12000.607738'
2023-03-18 08:47:01 (3892): Status Report: CPU Time: '47882.843750'
2023-03-18 10:27:21 (3892): Status Report: Elapsed Time: '18000.722046'
2023-03-18 10:27:21 (3892): Status Report: CPU Time: '77840.375000'
2023-03-18 12:07:41 (3892): Status Report: Elapsed Time: '24001.206486'
2023-03-18 12:07:41 (3892): Status Report: CPU Time: '104906.156250'
2023-03-18 12:10:30 (3892): Guest Log:  *** Job finished ***
2023-03-18 12:10:30 (3892): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:09,619 | INFO     | [job] queue monitor thread has finished
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:12,002 | INFO     | [data] queue_monitor thread has finished
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:16,944 | WARNING  | no jobs in monitored_payloads queue (waited for 61 s)
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:16,944 | INFO     | [job] job monitor thread has finished
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:17,947 | INFO     | job.realtimelogging is not enabled
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:17,947 | INFO     | [payload] run_realtimelog thread has finished
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:18,774 | INFO     | end of generic workflow (traces error code: 0)
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:18,774 | INFO     | traces error code: 0
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:18,775 | INFO     | pilot has finished
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,094 [wrapper] ==== pilot stdout END ====
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,103 [wrapper] ==== wrapper stdout RESUME ====
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,110 [wrapper] pilotpid: 5400
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,119 [wrapper] Pilot exit status: 0
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,377 [wrapper] pandaids: 5785277708
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,400 [wrapper] apfmon messages muted
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,408 [wrapper] Test setup, not cleaning
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,420 [wrapper] ==== wrapper stdout END ====
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,433 [wrapper] ==== wrapper stderr END ====
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,456 [wrapper] wrapperexiting ec=0, duration=24087
2023-03-18 12:10:30 (3892): Guest Log: 2023-03-18 11:10:19,467 [wrapper] apfmon messages muted
2023-03-18 12:10:30 (3892): Guest Log:  *** Error codes and diagnostics ***
2023-03-18 12:10:30 (3892): Guest Log:     "exeErrorCode": 0,
2023-03-18 12:10:30 (3892): Guest Log:     "exeErrorDiag": "",
2023-03-18 12:10:30 (3892): Guest Log:     "pilotErrorCode": 0,
2023-03-18 12:10:30 (3892): Guest Log:     "pilotErrorDiag": "",
2023-03-18 12:10:30 (3892): Guest Log:  *** Listing of results directory ***
2023-03-18 12:10:30 (3892): Guest Log: total 314316
2023-03-18 12:10:30 (3892): Guest Log: -rw-r--r--. 1 atlas atlas    386707 Mar 16 08:29 pilot3.tar.gz
2023-03-18 12:10:31 (3892): Guest Log: -rwx------. 1 atlas atlas     26447 Mar 16 08:32 runpilot2-wrapper.sh
2023-03-18 12:10:31 (3892): Guest Log: -rw-r--r--. 1 atlas atlas      4336 Mar 16 08:32 queuedata.json
2023-03-18 12:10:31 (3892): Guest Log: -rwxr-xr-x. 1 atlas atlas      8809 Mar 18 04:28 init_data.xml
2023-03-18 12:10:31 (3892): Guest Log: -rwxr-xr-x. 1 atlas atlas    398313 Mar 18 04:28 input.tar.gz
2023-03-18 12:10:31 (3892): Guest Log: -rwxr-xr-x. 1 atlas atlas     17076 Mar 18 04:28 start_atlas.sh
2023-03-18 12:10:31 (3892): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 18 04:28 EVNT.29838250._000008.pool.root.1 -> /data/./ATLAS.root_0
2023-03-18 12:10:31 (3892): Guest Log: -rw-r--r--. 1 atlas atlas      2465 Mar 18 04:28 pandaJob.out
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas       449 Mar 18 04:28 setup.sh.local
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas   1426500 Mar 18 04:31 cric_ddmendpoints.json
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas    979306 Mar 18 04:31 agis_schedconf.cvmfs.json
2023-03-18 12:10:31 (3892): Guest Log: drwx------. 4 atlas atlas       245 Mar 18 04:32 pilot3
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas 316208360 Mar 18 10:59 HITS.32777692._000148.pool.root.1
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas      1034 Mar 18 11:02 memory_monitor_summary.json
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas    343805 Mar 18 11:06 log.32777692._000148.job.log.tgz.1
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas      7620 Mar 18 11:10 heartbeat.json
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas      2926 Mar 18 11:10 pilotlog.txt
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas    808421 Mar 18 11:10 log.32777692._000148.job.log.1
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas       345 Mar 18 11:10 output.list
2023-03-18 12:10:31 (3892): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 18 11:10 runtime_log
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas   1167360 Mar 18 11:10 result.tar.gz
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas       643 Mar 18 11:10 sEyKDm3Cyw2n7Olcko1bjSoqABFKDmABFKDm7AsVDm9RGKDmh2Wrun.diag
2023-03-18 12:10:31 (3892): Guest Log: -rw-r--r--. 1 atlas atlas     10239 Mar 18 11:10 runtime_log.err
2023-03-18 12:10:31 (3892): Guest Log: Looking for outputfile HITS.32777692._000148.pool.root.1
2023-03-18 12:10:31 (3892): Guest Log: HITS file was successfully produced
2023-03-18 12:10:31 (3892): Guest Log: -rw-------. 1 atlas atlas 316208360 Mar 18 10:59 /home/atlas/RunAtlas/HITS.32777692._000148.pool.root.1
2023-03-18 12:10:32 (3892): Guest Log: Successfully finished the ATLAS job!
2023-03-18 12:10:32 (3892): Guest Log: Copying the results back to the shared directory!
2023-03-18 12:10:32 (3892): Guest Log:  *** Contents of shared directory: ***
2023-03-18 12:10:32 (3892): Guest Log: total 738944
2023-03-18 12:10:32 (3892): Guest Log: -rwxrwxrwx. 1 root root 438861830 Mar 18 04:26 ATLAS.root_0
2023-03-18 12:10:32 (3892): Guest Log: -rwxrwxrwx. 1 root root 316208360 Mar 18 10:59 HITS.pool.root.1
2023-03-18 12:10:32 (3892): Guest Log: -rwxrwxrwx. 1 root root      8809 Mar 18 04:26 init_data.xml
2023-03-18 12:10:32 (3892): Guest Log: -rwxrwxrwx. 1 root root    398313 Mar 16 22:18 input.tar.gz
2023-03-18 12:10:32 (3892): Guest Log: -rwxrwxrwx. 1 root root   1167360 Mar 18  2023 result.tar.gz
2023-03-18 12:10:32 (3892): Guest Log: -rwxrwxrwx. 1 root root     17076 Mar 16 22:18 start_atlas.sh
2023-03-18 12:10:32 (3892): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-18 12:10:32 (3892): VM Completion File Detected.
2023-03-18 12:10:32 (3892): Powering off VM.
2023-03-18 12:10:34 (3892): Successfully stopped VM.
2023-03-18 12:10:34 (3892): Deregistering VM. (boinc_aa5e64a038564c18, slot#1)
2023-03-18 12:10:34 (3892): Removing network bandwidth throttle group from VM.
2023-03-18 12:10:34 (3892): Removing VM from VirtualBox.
12:10:39 (3892): called boinc_finish(0)

</stderr_txt>
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