Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-20 13:42:02 (13096): Detected: vboxwrapper 26206
2023-03-20 13:42:02 (13096): Detected: BOINC client v7.16.20
2023-03-20 13:42:03 (13096): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2023-03-20 13:42:04 (13096): Successfully copied 'init_data.xml' to the shared directory.
2023-03-20 13:42:04 (13096): Create VM. (boinc_7fef64065bc66498, slot#8)
2023-03-20 13:42:05 (13096): Setting Memory Size for VM. (2241MB)
2023-03-20 13:42:05 (13096): Setting CPU Count for VM. (8)
2023-03-20 13:42:05 (13096): Setting Chipset Options for VM.
2023-03-20 13:42:06 (13096): Setting Graphics Controller Options for VM.
2023-03-20 13:42:06 (13096): Setting Boot Options for VM.
2023-03-20 13:42:06 (13096): Setting Network Configuration for NAT.
2023-03-20 13:42:06 (13096): Enabling VM Network Access.
2023-03-20 13:42:07 (13096): Disabling USB Support for VM.
2023-03-20 13:42:07 (13096): Disabling COM Port Support for VM.
2023-03-20 13:42:07 (13096): Disabling LPT Port Support for VM.
2023-03-20 13:42:08 (13096): Disabling Audio Support for VM.
2023-03-20 13:42:08 (13096): Disabling Clipboard Support for VM.
2023-03-20 13:42:08 (13096): Disabling Drag and Drop Support for VM.
2023-03-20 13:42:08 (13096): Adding storage controller(s) to VM.
2023-03-20 13:42:09 (13096): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-20 13:42:10 (13096): Adding VirtualBox Guest Additions to VM.
2023-03-20 13:42:10 (13096): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-20 13:42:10 (13096): forwarding host port 50528 to guest port 80
2023-03-20 13:42:10 (13096): Enabling remote desktop for VM.
2023-03-20 13:42:11 (13096): Required extension pack not installed, remote desktop not enabled.
2023-03-20 13:42:11 (13096): Enabling shared directory for VM.
2023-03-20 13:42:11 (13096): Starting VM using VBoxManage interface. (boinc_7fef64065bc66498, slot#8)
2023-03-20 13:42:15 (13096): Successfully started VM. (PID = '6316')
2023-03-20 13:42:15 (13096): Reporting VM Process ID to BOINC.
2023-03-20 13:42:15 (13096): Guest Log: BIOS: VirtualBox 6.0.14
2023-03-20 13:42:15 (13096): Guest Log: CPUID EDX: 0x178bfbff
2023-03-20 13:42:15 (13096): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-20 13:42:15 (13096): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-20 13:42:15 (13096): Detected: Web Application Enabled (http://localhost:50528)
2023-03-20 13:42:15 (13096): Preference change detected
2023-03-20 13:42:15 (13096): Setting CPU throttle for VM. (90%)
2023-03-20 13:42:15 (13096): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-20 13:42:17 (13096): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-20 13:42:17 (13096): Guest Log: BIOS: Booting from Hard Disk...
2023-03-20 13:42:21 (13096): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-20 13:42:21 (13096): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-20 13:42:21 (13096): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-20 13:42:34 (13096): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-20 13:42:34 (13096): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-20 13:42:51 (13096): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-20 13:42:51 (13096): Guest Log: 00:00:00.000358 main     Log opened 2023-03-20T13:42:49.440008000Z
2023-03-20 13:42:51 (13096): Guest Log: 00:00:00.000606 main     OS Product: Linux
2023-03-20 13:42:51 (13096): Guest Log: 00:00:00.000688 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-20 13:42:51 (13096): Guest Log: 00:00:00.000888 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-20 13:42:51 (13096): Guest Log: 00:00:00.000964 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-20 13:42:51 (13096): Guest Log: 00:00:00.000967 main     Process ID: 1289
2023-03-20 13:42:51 (13096): Guest Log: 00:00:00.000969 main     Package type: LINUX_64BITS_GENERIC
2023-03-20 13:42:51 (13096): Guest Log: 00:00:00.003934 main     5.2.32 r132073 started. Verbose level = 0
2023-03-20 13:42:51 (13096): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-20 13:42:51 (13096): Guest Log: [INFO] Mounting shared directory
2023-03-20 13:42:51 (13096): Guest Log: [INFO] Checking for init_data.xml
2023-03-20 13:42:58 (13096): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-20 13:42:58 (13096): Guest Log: [INFO] Detected branch: dev
2023-03-20 13:43:00 (13096): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-20 13:43:00 (13096): Guest Log: Copying input files
2023-03-20 13:43:01 (13096): Guest Log: 00:00:10.009638 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 398 608 000ns (GuestNow=1 679 334 180 845 917 000 ns GuestLast=1 679 319 769 447 309 000 ns fSetTimeLastLoop=true )
2023-03-20 13:43:16 (13096): Guest Log: Copied input files into RunAtlas.
2023-03-20 13:43:16 (13096): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-20 13:43:16 (13096): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-20 13:43:16 (13096): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-20 13:43:16 (13096): Guest Log: Further information can be found at the LHC@home message board.
2023-03-20 13:43:30 (13096): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-20 13:43:31 (13096): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-20 13:43:31 (13096): Guest Log: 2.6.3.0 1572 0 32048 116972 4 1 3116360 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2023-03-20 13:43:35 (13096): Guest Log: copied the webapp to /var/www
2023-03-20 13:43:35 (13096): Guest Log: ATHENA_PROC_NUMBER=8
2023-03-20 13:43:35 (13096): Guest Log: ATHENA_CORE_NUMBER=8
2023-03-20 13:43:36 (13096): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-20 13:43:36 (13096): Guest Log:  *** Starting ATLAS job. (PandaID=5785277720 taskID=32777692) ***
2023-03-20 15:22:21 (13096): Status Report: Elapsed Time: '6000.000000'
2023-03-20 15:22:21 (13096): Status Report: CPU Time: '18546.578125'
2023-03-20 17:02:37 (13096): Status Report: Elapsed Time: '12000.000000'
2023-03-20 17:02:37 (13096): Status Report: CPU Time: '60257.015625'
2023-03-20 18:42:48 (13096): Status Report: Elapsed Time: '18000.000000'
2023-03-20 18:42:48 (13096): Status Report: CPU Time: '102301.625000'
2023-03-20 20:22:56 (13096): Status Report: Elapsed Time: '24000.000000'
2023-03-20 20:22:56 (13096): Status Report: CPU Time: '144235.218750'
2023-03-20 22:03:19 (13096): Status Report: Elapsed Time: '30000.000000'
2023-03-20 22:03:19 (13096): Status Report: CPU Time: '186017.171875'
2023-03-20 22:55:12 (13096): Guest Log:  *** Job finished ***
2023-03-20 22:55:12 (13096): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:01,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:04,123 | INFO     | [data] queue_monitor thread has finished
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:05,060 | WARNING  | no jobs in monitored_payloads queue (waited for 62 s)
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:05,061 | INFO     | [job] job monitor thread has finished
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:08,850 | INFO     | job.realtimelogging is not enabled
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:08,850 | INFO     | [payload] run_realtimelog thread has finished
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:09,383 | INFO     | end of generic workflow (traces error code: 0)
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:09,394 | INFO     | traces error code: 0
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:09,395 | INFO     | pilot has finished
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:09,761 [wrapper] ==== pilot stdout END ====
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:09,781 [wrapper] ==== wrapper stdout RESUME ====
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:09,796 [wrapper] pilotpid: 5437
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:09,812 [wrapper] Pilot exit status: 0
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:10,163 [wrapper] pandaids: 5785277720
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:10,210 [wrapper] apfmon messages muted
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:10,226 [wrapper] Test setup, not cleaning
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:10,241 [wrapper] ==== wrapper stdout END ====
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:10,260 [wrapper] ==== wrapper stderr END ====
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:10,280 [wrapper] wrapperexiting ec=0, duration=33091
2023-03-20 22:55:12 (13096): Guest Log: 2023-03-21 02:55:10,305 [wrapper] apfmon messages muted
2023-03-20 22:55:12 (13096): Guest Log:  *** Error codes and diagnostics ***
2023-03-20 22:55:12 (13096): Guest Log:     "exeErrorCode": 0,
2023-03-20 22:55:12 (13096): Guest Log:     "exeErrorDiag": "",
2023-03-20 22:55:12 (13096): Guest Log:     "pilotErrorCode": 0,
2023-03-20 22:55:12 (13096): Guest Log:     "pilotErrorDiag": "",
2023-03-20 22:55:12 (13096): Guest Log:  *** Listing of results directory ***
2023-03-20 22:55:12 (13096): Guest Log: total 313160
2023-03-20 22:55:12 (13096): Guest Log: -rw-r--r--. 1 atlas atlas    386707 Mar 16 08:29 pilot3.tar.gz
2023-03-20 22:55:12 (13096): Guest Log: -rwx------. 1 atlas atlas     26447 Mar 16 08:32 runpilot2-wrapper.sh
2023-03-20 22:55:12 (13096): Guest Log: -rw-r--r--. 1 atlas atlas      4336 Mar 16 08:32 queuedata.json
2023-03-20 22:55:12 (13096): Guest Log: -rwxr-xr-x. 1 atlas atlas      7964 Mar 20 17:43 init_data.xml
2023-03-20 22:55:12 (13096): Guest Log: -rwxr-xr-x. 1 atlas atlas    398325 Mar 20 17:43 input.tar.gz
2023-03-20 22:55:12 (13096): Guest Log: -rwxr-xr-x. 1 atlas atlas     17076 Mar 20 17:43 start_atlas.sh
2023-03-20 22:55:12 (13096): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 20 17:43 EVNT.29838250._000008.pool.root.1 -> /data/./ATLAS.root_0
2023-03-20 22:55:12 (13096): Guest Log: -rw-r--r--. 1 atlas atlas      2465 Mar 20 17:43 pandaJob.out
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas       412 Mar 20 17:43 setup.sh.local
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas    978999 Mar 20 17:45 agis_schedconf.cvmfs.json
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas   1426500 Mar 20 17:45 cric_ddmendpoints.json
2023-03-20 22:55:12 (13096): Guest Log: drwx------. 4 atlas atlas       245 Mar 20 17:47 pilot3
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas 314595679 Mar 21 02:43 HITS.32777692._000160.pool.root.1
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas      1040 Mar 21 02:48 memory_monitor_summary.json
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas    437061 Mar 21 02:51 log.32777692._000160.job.log.tgz.1
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas      7647 Mar 21 02:54 heartbeat.json
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas      3018 Mar 21 02:55 pilotlog.txt
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas    931602 Mar 21 02:55 log.32777692._000160.job.log.1
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas       345 Mar 21 02:55 output.list
2023-03-20 22:55:12 (13096): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 21 02:55 runtime_log
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas   1382400 Mar 21 02:55 result.tar.gz
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas       646 Mar 21 02:55 9JLMDm3Cyw2n7Olcko1bjSoqABFKDmABFKDm7AsVDmLSGKDm2qlsRn.diag
2023-03-20 22:55:12 (13096): Guest Log: -rw-r--r--. 1 atlas atlas      9950 Mar 21 02:55 runtime_log.err
2023-03-20 22:55:12 (13096): Guest Log: Looking for outputfile HITS.32777692._000160.pool.root.1
2023-03-20 22:55:12 (13096): Guest Log: HITS file was successfully produced
2023-03-20 22:55:12 (13096): Guest Log: -rw-------. 1 atlas atlas 314595679 Mar 21 02:43 /home/atlas/RunAtlas/HITS.32777692._000160.pool.root.1
2023-03-20 22:55:15 (13096): Guest Log: Successfully finished the ATLAS job!
2023-03-20 22:55:15 (13096): Guest Log: Copying the results back to the shared directory!
2023-03-20 22:55:15 (13096): Guest Log:  *** Contents of shared directory: ***
2023-03-20 22:55:15 (13096): Guest Log: total 737576
2023-03-20 22:55:15 (13096): Guest Log: -rwxrwxrwx. 1 root root 438861830 Mar 20 17:42 ATLAS.root_0
2023-03-20 22:55:15 (13096): Guest Log: -rwxrwxrwx. 1 root root 314595679 Mar 21 02:43 HITS.pool.root.1
2023-03-20 22:55:15 (13096): Guest Log: -rwxrwxrwx. 1 root root      7964 Mar 20 17:42 init_data.xml
2023-03-20 22:55:15 (13096): Guest Log: -rwxrwxrwx. 1 root root    398325 Mar 17 01:44 input.tar.gz
2023-03-20 22:55:15 (13096): Guest Log: -rwxrwxrwx. 1 root root   1382400 Mar 21 02:55 result.tar.gz
2023-03-20 22:55:15 (13096): Guest Log: -rwxrwxrwx. 1 root root     17076 Mar 17 01:44 start_atlas.sh
2023-03-20 22:55:15 (13096): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-20 22:55:15 (13096): VM Completion File Detected.
2023-03-20 22:55:15 (13096): Powering off VM.
2023-03-20 22:55:16 (13096): Successfully stopped VM.
2023-03-20 22:55:16 (13096): Deregistering VM. (boinc_7fef64065bc66498, slot#8)
2023-03-20 22:55:16 (13096): Removing network bandwidth throttle group from VM.
2023-03-20 22:55:17 (13096): Removing VM from VirtualBox.
22:55:22 (13096): called boinc_finish(0)

</stderr_txt>
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