Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2023-03-20 22:55:31 (11136): Detected: vboxwrapper 26206
2023-03-20 22:55:31 (11136): Detected: BOINC client v7.16.20
2023-03-20 22:55:32 (11136): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2023-03-20 22:55:32 (11136): Successfully copied 'init_data.xml' to the shared directory.
2023-03-20 22:55:33 (11136): Create VM. (boinc_a631a2f78e44833a, slot#8)
2023-03-20 22:55:33 (11136): Setting Memory Size for VM. (2241MB)
2023-03-20 22:55:34 (11136): Setting CPU Count for VM. (8)
2023-03-20 22:55:34 (11136): Setting Chipset Options for VM.
2023-03-20 22:55:34 (11136): Setting Graphics Controller Options for VM.
2023-03-20 22:55:34 (11136): Setting Boot Options for VM.
2023-03-20 22:55:35 (11136): Setting Network Configuration for NAT.
2023-03-20 22:55:35 (11136): Enabling VM Network Access.
2023-03-20 22:55:35 (11136): Disabling USB Support for VM.
2023-03-20 22:55:35 (11136): Disabling COM Port Support for VM.
2023-03-20 22:55:36 (11136): Disabling LPT Port Support for VM.
2023-03-20 22:55:36 (11136): Disabling Audio Support for VM.
2023-03-20 22:55:36 (11136): Disabling Clipboard Support for VM.
2023-03-20 22:55:36 (11136): Disabling Drag and Drop Support for VM.
2023-03-20 22:55:37 (11136): Adding storage controller(s) to VM.
2023-03-20 22:55:37 (11136): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-03-20 22:55:38 (11136): Adding VirtualBox Guest Additions to VM.
2023-03-20 22:55:38 (11136): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-03-20 22:55:39 (11136): forwarding host port 53338 to guest port 80
2023-03-20 22:55:39 (11136): Enabling remote desktop for VM.
2023-03-20 22:55:39 (11136): Required extension pack not installed, remote desktop not enabled.
2023-03-20 22:55:39 (11136): Enabling shared directory for VM.
2023-03-20 22:55:40 (11136): Starting VM using VBoxManage interface. (boinc_a631a2f78e44833a, slot#8)
2023-03-20 22:55:44 (11136): Successfully started VM. (PID = '16636')
2023-03-20 22:55:44 (11136): Reporting VM Process ID to BOINC.
2023-03-20 22:55:44 (11136): Guest Log: BIOS: VirtualBox 6.0.14
2023-03-20 22:55:44 (11136): Guest Log: CPUID EDX: 0x178bfbff
2023-03-20 22:55:44 (11136): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-03-20 22:55:44 (11136): VM state change detected. (old = 'poweredoff', new = 'running')
2023-03-20 22:55:44 (11136): Detected: Web Application Enabled (http://localhost:53338)
2023-03-20 22:55:44 (11136): Preference change detected
2023-03-20 22:55:44 (11136): Setting CPU throttle for VM. (90%)
2023-03-20 22:55:44 (11136): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2023-03-20 22:55:46 (11136): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-03-20 22:55:46 (11136): Guest Log: BIOS: Booting from Hard Disk...
2023-03-20 22:55:50 (11136): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-03-20 22:55:50 (11136): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-03-20 22:55:50 (11136): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-03-20 22:56:01 (11136): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-03-20 22:56:01 (11136): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-03-20 22:56:18 (11136): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-03-20 22:56:18 (11136): Guest Log: 00:00:00.000218 main     Log opened 2023-03-20T22:56:16.491777000Z
2023-03-20 22:56:18 (11136): Guest Log: 00:00:00.000337 main     OS Product: Linux
2023-03-20 22:56:18 (11136): Guest Log: 00:00:00.000383 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-03-20 22:56:18 (11136): Guest Log: 00:00:00.000464 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-03-20 22:56:18 (11136): Guest Log: 00:00:00.000542 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-03-20 22:56:18 (11136): Guest Log: 00:00:00.000544 main     Process ID: 1293
2023-03-20 22:56:18 (11136): Guest Log: 00:00:00.000545 main     Package type: LINUX_64BITS_GENERIC
2023-03-20 22:56:18 (11136): Guest Log: 00:00:00.002161 main     5.2.32 r132073 started. Verbose level = 0
2023-03-20 22:56:19 (11136): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-03-20 22:56:19 (11136): Guest Log: [INFO] Mounting shared directory
2023-03-20 22:56:19 (11136): Guest Log: [INFO] Checking for init_data.xml
2023-03-20 22:56:28 (11136): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-03-20 22:56:28 (11136): Guest Log: [INFO] Detected branch: dev
2023-03-20 22:56:28 (11136): Guest Log: 00:00:10.005260 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 138 638 000ns (GuestNow=1 679 367 387 634 709 000 ns GuestLast=1 679 352 976 496 071 000 ns fSetTimeLastLoop=true )
2023-03-20 22:56:28 (11136): Guest Log: This is the dev version of the ATLAS job wrapper
2023-03-20 22:56:28 (11136): Guest Log: Copying input files
2023-03-20 22:56:52 (11136): Guest Log: Copied input files into RunAtlas.
2023-03-20 22:56:53 (11136): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-03-20 22:56:53 (11136): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-03-20 22:56:53 (11136): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-03-20 22:56:53 (11136): Guest Log: Further information can be found at the LHC@home message board.
2023-03-20 22:57:06 (11136): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-03-20 22:57:09 (11136): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-03-20 22:57:09 (11136): Guest Log: 2.6.3.0 1576 0 30152 116986 4 1 3116360 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-03-20 22:57:13 (11136): Guest Log: copied the webapp to /var/www
2023-03-20 22:57:13 (11136): Guest Log: ATHENA_PROC_NUMBER=8
2023-03-20 22:57:13 (11136): Guest Log: ATHENA_CORE_NUMBER=8
2023-03-20 22:57:13 (11136): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-03-20 22:57:13 (11136): Guest Log:  *** Starting ATLAS job. (PandaID=5785277748 taskID=32777692) ***
2023-03-21 00:36:24 (11136): Status Report: Elapsed Time: '6000.190100'
2023-03-21 00:36:24 (11136): Status Report: CPU Time: '18295.937500'
2023-03-21 02:16:59 (11136): Status Report: Elapsed Time: '12000.190100'
2023-03-21 02:16:59 (11136): Status Report: CPU Time: '60329.484375'
2023-03-21 03:58:13 (11136): Status Report: Elapsed Time: '18000.986311'
2023-03-21 03:58:13 (11136): Status Report: CPU Time: '102540.375000'
2023-03-21 05:38:25 (11136): Status Report: Elapsed Time: '24000.986311'
2023-03-21 05:38:25 (11136): Status Report: CPU Time: '144480.015625'
2023-03-21 07:18:39 (11136): Status Report: Elapsed Time: '30000.986311'
2023-03-21 07:18:39 (11136): Status Report: CPU Time: '186505.156250'
2023-03-21 08:14:22 (11136): Guest Log:  *** Job finished ***
2023-03-21 08:14:22 (11136): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:13:08,220 | INFO     | [job] queue monitor thread has finished
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:13:10,148 | INFO     | [data] queue_monitor thread has finished
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:13:17,277 | INFO     | job.realtimelogging is not enabled
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:13:17,278 | INFO     | [payload] run_realtimelog thread has finished
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:01,854 | WARNING  | no jobs in monitored_payloads queue (waited for 61 s)
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:01,854 | INFO     | [job] job monitor thread has finished
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:01,919 | INFO     | end of generic workflow (traces error code: 0)
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:01,935 | INFO     | traces error code: 0
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:01,936 | INFO     | pilot has finished
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:02,290 [wrapper] ==== pilot stdout END ====
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:02,324 [wrapper] ==== wrapper stdout RESUME ====
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:02,368 [wrapper] pilotpid: 5421
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:02,394 [wrapper] Pilot exit status: 0
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:03,026 [wrapper] pandaids: 5785277748
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:03,095 [wrapper] apfmon messages muted
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:03,124 [wrapper] Test setup, not cleaning
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:03,152 [wrapper] ==== wrapper stdout END ====
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:03,181 [wrapper] ==== wrapper stderr END ====
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:03,238 [wrapper] wrapperexiting ec=0, duration=33408
2023-03-21 08:14:22 (11136): Guest Log: 2023-03-21 12:14:03,272 [wrapper] apfmon messages muted
2023-03-21 08:14:22 (11136): Guest Log:  *** Error codes and diagnostics ***
2023-03-21 08:14:22 (11136): Guest Log:     "exeErrorCode": 0,
2023-03-21 08:14:22 (11136): Guest Log:     "exeErrorDiag": "",
2023-03-21 08:14:22 (11136): Guest Log:     "pilotErrorCode": 0,
2023-03-21 08:14:22 (11136): Guest Log:     "pilotErrorDiag": "",
2023-03-21 08:14:22 (11136): Guest Log:  *** Listing of results directory ***
2023-03-21 08:14:22 (11136): Guest Log: total 314036
2023-03-21 08:14:22 (11136): Guest Log: -rw-r--r--. 1 atlas atlas    386707 Mar 16 08:29 pilot3.tar.gz
2023-03-21 08:14:22 (11136): Guest Log: -rw-r--r--. 1 atlas atlas      4336 Mar 16 08:32 queuedata.json
2023-03-21 08:14:22 (11136): Guest Log: -rwx------. 1 atlas atlas     26447 Mar 16 08:33 runpilot2-wrapper.sh
2023-03-21 08:14:22 (11136): Guest Log: -rwxr-xr-x. 1 atlas atlas      7964 Mar 21 02:56 init_data.xml
2023-03-21 08:14:22 (11136): Guest Log: -rwxr-xr-x. 1 atlas atlas    398325 Mar 21 02:56 input.tar.gz
2023-03-21 08:14:22 (11136): Guest Log: -rwxr-xr-x. 1 atlas atlas     17076 Mar 21 02:56 start_atlas.sh
2023-03-21 08:14:22 (11136): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 21 02:56 EVNT.29838250._000009.pool.root.1 -> /data/./ATLAS.root_0
2023-03-21 08:14:22 (11136): Guest Log: -rw-r--r--. 1 atlas atlas      2464 Mar 21 02:57 pandaJob.out
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas       412 Mar 21 02:57 setup.sh.local
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas   1426500 Mar 21 02:59 cric_ddmendpoints.json
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas    979673 Mar 21 02:59 agis_schedconf.cvmfs.json
2023-03-21 08:14:22 (11136): Guest Log: drwx------. 4 atlas atlas       245 Mar 21 03:00 pilot3
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas 315502074 Mar 21 11:58 HITS.32777692._000162.pool.root.1
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas      1039 Mar 21 12:05 memory_monitor_summary.json
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas    413334 Mar 21 12:09 log.32777692._000162.job.log.tgz.1
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas      7642 Mar 21 12:13 heartbeat.json
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas      2926 Mar 21 12:14 pilotlog.txt
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas    947182 Mar 21 12:14 log.32777692._000162.job.log.1
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas       345 Mar 21 12:14 output.list
2023-03-21 08:14:22 (11136): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 21 12:14 runtime_log
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas   1382400 Mar 21 12:14 result.tar.gz
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas       646 Mar 21 12:14 SBqMDm1Dyw2n7Olcko1bjSoqABFKDmABFKDm7AsVDmaSGKDmHUHNXm.diag
2023-03-21 08:14:22 (11136): Guest Log: -rw-r--r--. 1 atlas atlas      9950 Mar 21 12:14 runtime_log.err
2023-03-21 08:14:22 (11136): Guest Log: Looking for outputfile HITS.32777692._000162.pool.root.1
2023-03-21 08:14:22 (11136): Guest Log: HITS file was successfully produced
2023-03-21 08:14:22 (11136): Guest Log: -rw-------. 1 atlas atlas 315502074 Mar 21 11:58 /home/atlas/RunAtlas/HITS.32777692._000162.pool.root.1
2023-03-21 08:14:26 (11136): Guest Log: Successfully finished the ATLAS job!
2023-03-21 08:14:26 (11136): Guest Log: Copying the results back to the shared directory!
2023-03-21 08:14:26 (11136): Guest Log:  *** Contents of shared directory: ***
2023-03-21 08:14:26 (11136): Guest Log: total 736536
2023-03-21 08:14:26 (11136): Guest Log: -rwxrwxrwx. 1 root root 436892662 Mar 21 02:55 ATLAS.root_0
2023-03-21 08:14:26 (11136): Guest Log: -rwxrwxrwx. 1 root root 315502074 Mar 21 11:58 HITS.pool.root.1
2023-03-21 08:14:26 (11136): Guest Log: -rwxrwxrwx. 1 root root      7964 Mar 21 02:55 init_data.xml
2023-03-21 08:14:26 (11136): Guest Log: -rwxrwxrwx. 1 root root    398325 Mar 17 01:15 input.tar.gz
2023-03-21 08:14:26 (11136): Guest Log: -rwxrwxrwx. 1 root root   1382400 Mar 21 12:14 result.tar.gz
2023-03-21 08:14:26 (11136): Guest Log: -rwxrwxrwx. 1 root root     17076 Mar 17 01:15 start_atlas.sh
2023-03-21 08:14:26 (11136): Guest Log:  *** Success! Shutting down the machine. ***
2023-03-21 08:14:26 (11136): VM Completion File Detected.
2023-03-21 08:14:26 (11136): Powering off VM.
2023-03-21 08:14:27 (11136): Successfully stopped VM.
2023-03-21 08:14:27 (11136): Deregistering VM. (boinc_a631a2f78e44833a, slot#8)
2023-03-21 08:14:27 (11136): Removing network bandwidth throttle group from VM.
2023-03-21 08:14:28 (11136): Removing VM from VirtualBox.
08:14:33 (11136): called boinc_finish(0)

</stderr_txt>
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